RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC14L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100003

Ensembl transcript IDs: ENST00000402592.7, ENST00000405717.7, ENST00000415072.1, ENST00000416523.5, ENST00000428195.5, ENST00000429917.5, ENST00000437022.5, ENST00000452649.1, ENST00000459728.5, ENST00000464335.5, ENST00000484486.5, ENST00000485482.5, ENST00000615189.5, ENST00000617837.4, ENST00000619483.4, ENST00000620251.1

Found 586 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGGCCCAGTGCTAGCTCCGCAGGCGCTCGCCCGGACTCACACTTaGCTCGCACGGGCTACGCGGCACGTACTGAGCAGCTGGCGGGGC +
Preference number: 1 (lower is better)
Translates to: LGPVLAPQALARTHT*LARATRHVLSSWRG
Trigger: GCCCCGCCAGCTGCTCAGTACGTGCCGCGTAGCCCGTGCGAGCCAAGTGTGAGTCCGGGCGAGCGCCTGCGGAGCTAGCACTGGGCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 90 bp TGCAGCCTCGGCCCCTTCCGGTCCGCGCTAGCCTGGCCTTTGCCCTaGGCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGG +
Preference number: 1 (lower is better)
Translates to: CSLGPFRSALAWPLP*APSASQDELPRRGR
Trigger: CCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGCTCAGGGCAAAGGCCAGGCTAGCGCGGACCGGAAGGGGCCGAGGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 90 bp CGGGGCCGGGGCCTGGCTCTGAGGGAAAGGCGTTCCCGCCAGGTCTaGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCACCTGTGGTTC +
Preference number: 1 (lower is better)
Translates to: RGRGLALRERRSRQV*GRLPMFSKAQHLWF
Trigger: GAACCACAGGTGCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTTCCCTCAGAGCCAGGCCCCGGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR TCA 90 bp GCTGGGTCCGGGTCCCTGACGCCGTCTGAGTTTGGGCCTCTTGAGTaGGAGGCAGCGAGGAGCCTAGCGGTGGGCATTGAATTTCACTCC +
Preference number: 1 (lower is better)
Translates to: AGSGSLTPSEFGPLE*EAARSLAVGIEFHS
Trigger: GGAGTGAAATTCAATGCCCACCGCTAGGCTCCTCGCTGCCTCTCACTCAAGAGGCCCAAACTCAGACGGCGTCAGGGACCCGGACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 90 bp TGCGCCCTATCTATTGGCGTGAAACGGCTGCTGGGTCCGGGTCCCTaGCGCCGTCTGAGTTTGGGCCTCTTGAGTGAGAGGCAGCGAGGA +
Preference number: 1 (lower is better)
Translates to: CALSIGVKRLLGPGP*RRLSLGLLSERQRG
Trigger: TCCTCGCTGCCTCTCACTCAAGAGGCCCAAACTCAGACGGCGTCAGGGACCCGGACCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR GCA 90 bp CGCGTTGCATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTaGTCAGGTCAGTCAGGAAGCGGGTTGGCGGGCACCGCGGGACAC +
Preference number: 1 (lower is better)
Translates to: RVACLPQRWDCLVRP*SGQSGSGLAGTAGH
Trigger: GTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 90 bp CTCCCTGGCCCTCCCTGCAGCTGCGATCCCTGTGGGTCATTTCCCTaGCGCTTTGTTTGCATGGAGAACAGCGGGTGGGTACCCGAAGTC +
Preference number: 1 (lower is better)
Translates to: LPGPPCSCDPCGSFP*RFVCMENSGWVPEV
Trigger: GACTTCGGGTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAGCTGCAGGGAGGGCCAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 90 bp GGTCAGTCAGGAAGCGGGTTGGCGGGCACCGCGGGACACTCAGACTaGCAAACACCCTCTCCGAGTGCTGCTCTCTTGATCCCACTTAGC +
Preference number: 1 (lower is better)
Translates to: GQSGSGLAGTAGHSD*QTPSPSAALLIPLS
Trigger: GCTAAGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGACTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 90 bp ACGCTAGAGAGCCGAGGAGGATTTCTGCGCATGCGCCCTATCTATTaGCGTGAAACGGCTGCTGGGTCCGGGTCCCTGACGCCGTCTGAG +
Preference number: 1 (lower is better)
Translates to: TLESRGGFLRMRPIY*RETAAGSGSLTPSE
Trigger: CTCAGACGGCGTCAGGGACCCGGACCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCATGCGCAGAAATCCTCCTCGGCTCTCTAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR GCA 90 bp GCCTGGCTACGCCGACCGGCACCTGAACTCCCTGCACGCGTTGCATaGCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTGCTCAGGT +
Preference number: 1 (lower is better)
Translates to: AWLRRPAPELPARVA*LPQRWDCLVRPCSG
Trigger: ACCTGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCGTAGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR GCA 90 bp CCCTGCAGCTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTaGATGGAGAACAGCGGGTGGGTACCCGAAGTCCCAGGAAGCTCT +
Preference number: 1 (lower is better)
Translates to: PCSCDPCGSFPWRFV*MENSGWVPEVPGSS
Trigger: AGAGCTTCCTGGGACTTCGGGTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAGCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 90 bp CCGGCACCTGAACTCCCTGCACGCGTTGCATGCCTCCCACAGAGATaGGACTGCTTAGTAAGACCTTGCTCAGGTCAGTCAGGAAGCGGG +
Preference number: 1 (lower is better)
Translates to: PAPELPARVACLPQR*DCLVRPCSGQSGSG
Trigger: CCCGCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGTTCAGGTGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR TCA 90 bp CAAAGAGGCAGGCCGTGTGGCCCAGGAGTTGCCAAAGTCTCAAAGTaGGGGAGAGGCCAGCCTGTCTACCGAGTGGGAAGATGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: QRGRPCGPGVAKVSK*GRGQPVYRVGRCVL
Trigger: CAGCACACATCTTCCCACTCGGTAGACAGGCTGGCCTCTCCCTCACTTTGAGACTTTGGCAACTCCTGGGCCACACGGCCTGCCTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR GCA 90 bp CCTGAACTCCCTGCACGCGTTGCATGCCTCCCACAGAGATGGGACTaGTTAGTAAGACCTTGCTCAGGTCAGTCAGGAAGCGGGTTGGCG +
Preference number: 1 (lower is better)
Translates to: PELPARVACLPQRWD*LVRPCSGQSGSGLA
Trigger: CGCCAACCCGCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGTTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR TCA 90 bp AGTGAGGGAGAGGCCAGCCTGTCTACCGAGTGGGAAGATGTGTGCTaGCTCAGGCCACCTCCTGAGACCTGGGAAAAGCCAAAAGCTACC +
Preference number: 1 (lower is better)
Translates to: SEGEASLSTEWEDVC*LRPPPETWEKPKAT
Trigger: GGTAGCTTTTGGCTTTTCCCAGGTCTCAGGAGGTGGCCTGAGTCAGCACACATCTTCCCACTCGGTAGACAGGCTGGCCTCTCCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR TCA 90 bp CTTGTAGGGCTGTATAGGACAGTCCGGTCAGCAGTTACCTCAAGCTaGGCTGGGCTTGTAGGTTGGGGAGGGTGGTGGGTGGGAGAAAAG +
Preference number: 1 (lower is better)
Translates to: LVGLYRTVRSAVTSS*AGLVGWGGWWVGEK
Trigger: CTTTTCTCCCACCCACCACCCTCCCCAACCTACAAGCCCAGCTCAGCTTGAGGTAACTGCTGACCGGACTGTCCTATACAGCCCTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR GCA 90 bp CTAAATGAGGCTAGAGGAGTGAACGGTGAGCCCCTGGGAGGTAGGTaGCTGGACTCTGGAGTCCCTTCTCAGCAGTCGCCATGTATAACT +
Preference number: 1 (lower is better)
Translates to: LNEARGVNGEPLGGR*LDSGVPSQQSPCIT
Trigger: AGTTATACATGGCGACTGCTGAGAAGGGACTCCAGAGTCCAGGCACCTACCTCCCAGGGGCTCACCGTTCACTCCTCTAGCCTCATTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 90 bp AAACTCAGGGGTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTaGTCCCATGCCCACCCAGCCAGTTCTGTCTCTGTGACCTCTGGG +
Preference number: 1 (lower is better)
Translates to: KLRGEGCTFEHLLTL*SHAHPASSVSVTSG
Trigger: CCCAGAGGTCACAGAGACAGAACTGGCTGGGTGGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCACCCCTGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR TCA 90 bp CGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTaGTCCCACTTAGCATTTTTGTCTCGGGGTTGCTCACATGGAGGA +
Preference number: 1 (lower is better)
Translates to: RDTQTGKHPLRVLLS*SHLAFLSRGCSHGG
Trigger: TCCTCCATGTGAGCAACCCCGAGACAAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 90 bp CTTGTGATCCCATGCCCACCCAGCCAGTTCTGTCTCTGTGACCTCTaGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCA +
Preference number: 1 (lower is better)
Translates to: LVIPCPPSQFCLCDL*EGASPRNICPVTDP
Trigger: TGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGACAGAACTGGCTGGGTGGGCATGGGATCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR TCA 90 bp CTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATaGCTGCTACAAGGGGTAGAAATTGACAGGGAGACACTGAGGGGG +
Preference number: 1 (lower is better)
Translates to: LSSSPVSLGFRVVRK*LLQGVEIDRETLRG
Trigger: CCCCCTCAGTGTCTCCCTGTCAATTTCTACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
3UTR GCA 90 bp AAGCCTTCCCCCGCTGGACCTCAGTTCACCCAGGTGAGCAATGTGTaGACTTCACTAAGTCTCTGTGACTCCTTGGCGGGTATAATTGAG +
Preference number: 1 (lower is better)
Translates to: KPSPAGPQFTQVSNV*TSLSLCDSLAGIIE
Trigger: CTCAATTATACCCGCCAAGGAGTCACAGAGACTTAGTGAAGTGCACACATTGCTCACCTGGGTGAACTGAGGTCCAGCGGGGGAAGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CCA 90 bp TCACTAAGTCTCTGTGACTCCTTGGCGGGTATAATTGAGCGGCGTTaGAGACAATCCTGGGTTCAAATCCTAGCTGTGCCGCCTACTGGC +
Preference number: 1 (lower is better)
Translates to: SLSLCDSLAGIIERR*RQSWVQILAVPPTG
Trigger: GCCAGTAGGCGGCACAGCTAGGATTTGAACCCAGGATTGTCTCCAACGCCGCTCAATTATACCCGCCAAGGAGTCACAGAGACTTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CCA 90 bp AGTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTaGGGACTCCTTAGGTATTTGATAGACACGGAGACCCACTGCAGT +
Preference number: 1 (lower is better)
Translates to: SLQDRQILSRWPASS*GLLRYLIDTETHCS
Trigger: ACTGCAGTGGGTCTCCGTGTCTATCAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 90 bp CTAAAGGACTCTCCATGTCTTACACCTGAAACCCTCCCACCAGCCTaGGAGCCCGTTTTACAGGTGAGAAAATGGAGGCACAGAGAAGGT +
Preference number: 1 (lower is better)
Translates to: LKDSPCLTPETLPPA*EPVLQVRKWRHREG
Trigger: ACCTTCTCTGTGCCTCCATTTTCTCACCTGTAAAACGGGCTCCCAGGCTGGTGGGAGGGTTTCAGGTGTAAGACATGGAGAGTCCTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 90 bp TTGCCAGTCTACATGTTCGCTAAAGGACTCTCCATGTCTTACACCTaGAACCCTCCCACCAGCCTGGGAGCCCGTTTTACAGGTGAGAAA +
Preference number: 1 (lower is better)
Translates to: LPVYMFAKGLSMSYT*NPPTSLGARFTGEK
Trigger: TTTCTCACCTGTAAAACGGGCTCCCAGGCTGGTGGGAGGGTTTCAGGTGTAAGACATGGAGAGTCCTTTAGCGAACATGTAGACTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 90 bp CCTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTaGAACTCAGGGGTGAAGGCTGCACTTTTGAGCATCTGCTTACCT +
Preference number: 1 (lower is better)
Translates to: PAHSLCPFFGQLGDE*NSGVKAALLSICLP
Trigger: AGGTAAGCAGATGCTCAAAAGTGCAGCCTTCACCCCTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR GCA 90 bp ATCCCCACCGTAACTCTAGCAACCAGCTACCCTGCTACTCCTCATTaGGATCTAAACTTATGTGTTCATTTAGGAGCAAGTTTCTCCCCG +
Preference number: 1 (lower is better)
Translates to: IPTVTLATSYPATPH*DLNLCVHLGASFSP
Trigger: CGGGGAGAAACTTGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCTGGTTGCTAGAGTTACGGTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR GCA 90 bp GGAAGAGTTTCTGATCCCCACCGTAACTCTAGCAACCAGCTACCCTaGTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGC +
Preference number: 1 (lower is better)
Translates to: GRVSDPHRNSSNQLP*YSSLRSKLMCSFRS
Trigger: GCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCTGGTTGCTAGAGTTACGGTGGGGATCAGAAACTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 90 bp TCTGGGCCCAGTGCTAGCTCCGCAGGCGCTCGCCCGGACTCACACTaGGCTCGCACGGGCTACGCGGCACGTACTGAGCAGCTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: SGPSASSAGARPDSH*ARTGYAARTEQLAG
Trigger: CCCCGCCAGCTGCTCAGTACGTGCCGCGTAGCCCGTGCGAGCCAAGTGTGAGTCCGGGCGAGCGCCTGCGGAGCTAGCACTGGGCCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR TCA 90 bp CAGCGTTGTAAACCCAGGCCGGGATGTCCTGAGCGTTCTGGCAGAGGCCCGTGCGCCGGGGCCTGGCTCTaGGGGAAAGGCGTTCCCGCC +
Preference number: 2 (lower is better)
Translates to: QRCKPRPGCPERSGRGPCAGAWL*GKGVPA
Trigger: GGCGGGAACGCCTTTCCCTCAGAGCCAGGCCCCGGC...GCACGGGCCTCTGCCAGAACGCTCAGGACATCCCGGCCTGGGTTTACAACGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp GCGGCACGTACTGAGCAGCTGGCGGGGCAGGGTCTCCGCCGTCACTGTGAAGGCCGTTCCCGCCAGGTCTaGGGCCGCCTTCCCATGTTC +
Preference number: 2 (lower is better)
Translates to: AARTEQLAGQGLRRHCEGRSRQV*GRLPMF
Trigger: GAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACG...GCCTTCACAGTGACGGCGGAGACCCTGCCCCGCCAGCTGCTCAGTACGTGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR GCA 90 bp GCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGCCTGCACGCGTTGCATaGCTCCCACAGAGATGGGAC +
Preference number: 2 (lower is better)
Translates to: APSASQDELPRRGRGLALPARVA*LPQRWD
Trigger: GTCCCATCTCTGTGGGAGGCATGCAACGCGTGCAGG...CAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp GCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGAAAGCCCAGCACCTGTaGTTCGTTGGCGGGGCTCGT +
Preference number: 2 (lower is better)
Translates to: APSASQDELPRRGRGLALKAQHL*FVGGAR
Trigger: ACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTT...CAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR GCA 90 bp GCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGACTCCCTGCACGCGTTaGATGCCTCCCACAGAGATG +
Preference number: 2 (lower is better)
Translates to: APSASQDELPRRGRGLALTPCTR*MPPTEM
Trigger: CATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGT...CAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR GCA 90 bp GTCAGGAAGCGGGTTGGCGGGCACCGCGGGACACTCAGACTGGCAAACACCCTCCCCTGGCGCTTTGTTTaGATGGAGAACAGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: VRKRVGGHRGTLRLANTLPWRFV*MENSGW
Trigger: CCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGG...GAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR GCA 90 bp TACAACAGGAGGAAGCCTTCCCCCGCTGGACCTCAGTTCACCCAGGTGAGCAATTCTGGCAGAGGCCCGTaGAGCCTCGGCCCCTTCCGG +
Preference number: 2 (lower is better)
Translates to: YNRRKPSPAGPQFTQVSNSGRGP*SLGPFR
Trigger: CCGGAAGGGGCCGAGGCTGCACGGGCCTCTGCCAGA...ATTGCTCACCTGGGTGAACTGAGGTCCAGCGGGGGAAGGCTTCCTCCTGTTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR GCA 90 bp GCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGAACACCCTCTCCGAGTaGTGCTCTCTTGATCCCACT +
Preference number: 2 (lower is better)
Translates to: APSASQDELPRRGRGLALNTLSE*CSLDPT
Trigger: AGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTT...CAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp AGGGAAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCGGGGCTCGTGGGATTaGGGTAAGGGCTGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: RERRSRQVWGRLPMFSKARGSWD*GKGCGF
Trigger: GAAACCACAGCCCTTACCCCAATCCCACGAGCCCCG...GGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 90 bp GCCCTCCCTGCAGCTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTaGTTTGCATGGAGAACAGCGGGTGGGTACCCGAAGTCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: ALPAAAIPVGHFPGA*FAWRTAGGYPKSQE
Trigger: TTCCTGGGACTTCGGGTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAGCTGCAGGGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 90 bp TGGGACTGCTTAGTAAGACCTTGCTCAGGTCAGTCAGGAAGCGGGTaGGCGGGCACCGCGGGACACTCAGACTGGCAAACACCCTCTCCG +
Preference number: 2 (lower is better)
Translates to: WDCLVRPCSGQSGSG*AGTAGHSDWQTPSP
Trigger: CGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAGTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 90 bp ACGCGTTGCATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTaGCTCAGGTCAGTCAGGAAGCGGGTTGGCGGGCACCGCGGGACA +
Preference number: 2 (lower is better)
Translates to: TRCMPPTEMGLLSKT*LRSVRKRVGGHRGT
Trigger: TGTCCCGCGGTGCCCGCCAACCCGCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR GCA 90 bp TGCACGCGTTGCATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTGCTCCCACCCTGTGGTACATaGCCCCCGCCACCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: CTRCMPPTEMGLLSKTLLPPCGT*PPPPPA
Trigger: AGCTGGGGGTGGCGGGGGGCATGTACCACAGGGTGG...GAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp CGAGCTCTAAATGAGGCTAGAGGAGTGAACGGTGAGCCCCTGGGAGGTAGGTGCGCACCTGTGGTTCGTTaGCGGGGCTCGTGGGATTGG +
Preference number: 2 (lower is better)
Translates to: RALNEARGVNGEPLGGRCAPVVR*RGSWDW
Trigger: CCAATCCCACGAGCCCCGCCAACGAACCACAGGTGC...GCACCTACCTCCCAGGGGCTCACCGTTCACTCCTCTAGCCTCATTTAGAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CAA 90 bp TCCCTGCAGCTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTaGCATGGAGAACAGCGGGTGGGTACCCGAAGTCCCAGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: SLQLRSLWVISLALC*HGEQRVGTRSPRKL
Trigger: GAGCTTCCTGGGACTTCGGGTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAGCTGCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR GCA 90 bp CTCCAGGCCTGGCTACGCCGACCGGCACCTGAACTCCCTGCACGCGTTGCATGCCCACAGAGATGGGACTaGTTAGTAAGACCTTGCTCA +
Preference number: 2 (lower is better)
Translates to: LQAWLRRPAPELPARVACPQRWD*LVRPCS
Trigger: TGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGG...GCATGCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCGTAGCCAGGCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp GTCAGGAAGCGGGTTGGCGGGCACCGCGGGACACTCAGACTGGCAAACACCCTCTGTGGGTCATTTCCCTaGCGCTTTGTTTGCATGGAG +
Preference number: 2 (lower is better)
Translates to: VRKRVGGHRGTLRLANTLCGSFP*RFVCME
Trigger: CTCCATGCAAACAAAGCGCCAGGGAAATGACCCACA...GAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp TACAACAGGAGGAAGCCTTCCCCCGCTGGACCTCAGTTCACCCAGGTGAGCAATGCTGGGCTTGTAGGTTaGGGAGGGTGGTGGGTGGGA +
Preference number: 2 (lower is better)
Translates to: YNRRKPSPAGPQFTQVSNAGLVG*GGWWVG
Trigger: TCCCACCCACCACCCTCCCCAACCTACAAGCCCAGC...ATTGCTCACCTGGGTGAACTGAGGTCCAGCGGGGGAAGGCTTCCTCCTGTTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CCA 90 bp ATGAATGAATCGGGCAAGGGAGACAGAGTTGGGGTTAGTGATTACAACAGGAGGGGGGGCCTCCAGGCCTaGCTACGCCGACCGGCACCT +
Preference number: 2 (lower is better)
Translates to: MNESGKGDRVGVSDYNRRGGLQA*LRRPAP
Trigger: AGGTGCCGGTCGGCGTAGCCAGGCCTGGAGGCCCCC...CCTCCTGTTGTAATCACTAACCCCAACTCTGTCTCCCTTGCCCGATTCATTCAT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR TCA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGTGGGAAGATGTGTGCTaGCTCAGGCCACCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: LRSLWVISLALCLHGEQRWEDVC*LRPPPE
Trigger: CTCAGGAGGTGGCCTGAGTCAGCACACATCTTCCCA...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp TCTCGGGGTTGCTCACATGGAGGACTGCTTGGTGAGAGGCCGGTAGCACTGAAAATGGAGAACAGCGGGTaGGTACCCGAAGTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SRGCSHGGLLGERPVALKMENSG*VPEVPG
Trigger: TCCTGGGACTTCGGGTACCCACCCGCTGTTCTCCAT...TTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp GGAATTATTAGACAGTCCCTAAAACCACGTGATCGCTGCTCCTCCGCCTCCCTCCGTTGGCGGGGCTCGTaGGATTGGGGTAAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: GIIRQSLKPRDRCSSASLRWRGS*DWGKGC
Trigger: ACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACG...GAGGGAGGCGGAGGAGCAGCGATCACGTGGTTTTAGGGACTGTCTAATAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR TCA 90 bp TGCACGCGTTGCATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTGCTCTGGAGGACTGCTTGGTaGGAGGCCGGTAGCACTGAA +
Preference number: 2 (lower is better)
Translates to: CTRCMPPTEMGLLSKTLLWRTAW*EAGSTE
Trigger: TTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCA...GAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 90 bp GCGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTaGATCCCACTTAGCATTTTTGTCTCGGGGTTGCTCACATGGAGG +
Preference number: 2 (lower is better)
Translates to: AGHSDWQTPSPSAAL*IPLSIFVSGLLTWR
Trigger: CCTCCATGTGAGCAACCCCGAGACAAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR TCA 90 bp CGAGCTCTAAATGAGGCTAGAGGAGTGAACGGTGAGCCCCTGGGAGGTAGGTGCTCACTCCCTGCGCACTaGACGTTGCTTTATTCATTG +
Preference number: 2 (lower is better)
Translates to: RALNEARGVNGEPLGGRCSLPAH*TLLYSL
Trigger: CAATGAATAAAGCAACGTTCAGTGCGCAGGGAGTGA...GCACCTACCTCCCAGGGGCTCACCGTTCACTCCTCTAGCCTCATTTAGAGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CCA 90 bp CTGGACTCTGGAGTCCCTTCTCAGCAGTCGCCATGTATAACTAGGAAGCACTCGTGGCCAGCCAGCTCCTaGGGACTCCTTAGGTATTTG +
Preference number: 2 (lower is better)
Translates to: LDSGVPSQQSPCITRKHSWPASS*GLLRYL
Trigger: CAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCA...CGAGTGCTTCCTAGTTATACATGGCGACTGCTGAGAAGGGACTCCAGAGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR GCA 90 bp GCTGAGAACAGCAGACCCTTGGCATCCAGAGGTCCAATTATGTCGTACCAGACTTGGTGGGCACACTCTTaGAGAAGCAGCTCACACTCC +
Preference number: 2 (lower is better)
Translates to: AENSRPLASRGPIMSYQTWWAHS*RSSSHS
Trigger: GGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCA...AGTCTGGTACGACATAATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
3UTR-3UTR GCA 90 bp CTGGACTCTGGAGTCCCTTCTCAGCAGTCGCCATGTATAACTAGGAAGCACTCGAACACCCTCTCCGAGTaGTGCTCTCTTGATCCCACT +
Preference number: 2 (lower is better)
Translates to: LDSGVPSQQSPCITRKHSNTLSE*CSLDPT
Trigger: AGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTT...CGAGTGCTTCCTAGTTATACATGGCGACTGCTGAGAAGGGACTCCAGAGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR GCA 90 bp TACAACAGGAGGAAGCCTTCCCCCGCTGGACCTCAGTTCACCCAGGTGAGCAATTGCTTAGTAAGACCTTaGTCAGGTCAGTCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: YNRRKPSPAGPQFTQVSNCLVRP*SGQSGS
Trigger: GCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCA...ATTGCTCACCTGGGTGAACTGAGGTCCAGCGGGGGAAGGCTTCCTCCTGTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CCA 90 bp GGTGAGAGGCCGGTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCCCAGCCCAGTTTCTTTaGGCTTCAGGGTTGTGCGAA +
Preference number: 2 (lower is better)
Translates to: GERPVALKRALDDLLLAFPAQFL*ASGLCE
Trigger: TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG...GAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTACCGGCCTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp GGGAACAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCCTTGCACTTTGTGGTCTaGTGGGCACACTCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: GNREQEVLSGCPTSEARSLHFVV*WAHSCR
Trigger: TCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAA...GGAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
3UTR-3UTR CCA 90 bp TTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGTATGTCGTACCAGACTaGGCAGCCATCCAGGTCATA +
Preference number: 2 (lower is better)
Translates to: FVVWWAHSCRSSSHSRILYVVPD*AAIQVI
Trigger: TATGACCTGGATGGCTGCCCAGTCTGGTACGACATA...CAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
3UTR-3UTR TCA 90 bp AAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCGAAGCTCTGAGTCACTaGCAATCATTAGTAATCAAA +
Preference number: 2 (lower is better)
Translates to: KGVPARSGAAFPCSLKPSEALSH*QSLVIK
Trigger: TTTGATTACTAATGATTGTCAGTGACTCAGAGCTTC...GCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp TTCTCCCCGGCAGCTGACTTCCCTGAAGTGTTAAGTCCCAATCTTTCACCCTTTTGGCCAGCCAGCTCCTaGGGACTCCTTAGGTATTTG +
Preference number: 2 (lower is better)
Translates to: FSPAADFPEVLSPNLSPFWPASS*GLLRYL
Trigger: CAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCA...AAAGGGTGAAAGATTGGGACTTAACACTTCAGGGAAGTCAGCTGCCGGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp TTCTCCCCGGCAGCTGACTTCCCTGAAGTGTTAAGTCCCAATCTTTCACCCTTTCAGCTTCGCTGTCCCTaGACAGGTGAAGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: FSPAADFPEVLSPNLSPFQLRCP*TGEVGT
Trigger: TGTGCCAACTTCACCTGTCCAGGGACAGCGAAGCTG...AAAGGGTGAAAGATTGGGACTTAACACTTCAGGGAAGTCAGCTGCCGGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 90 bp ACCCAGGTGAGCAATGTGTGCACTTCACTAAGTCTCTGTGACTCCTaGGCGGGTATAATTGAGCGGCGTTGGAGACAATCCTGGGTTCAA +
Preference number: 2 (lower is better)
Translates to: TQVSNVCTSLSLCDS*AGIIERRWRQSWVQ
Trigger: TTGAACCCAGGATTGTCTCCAACGCCGCTCAATTATACCCGCCAAGGAGTCACAGAGACTTAGTGAAGTGCACACATTGCTCACCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CCA 90 bp CTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTCCCCAACTGCAGGGATTGCACTTTGTGGTCTaGTGGGCACACTCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: LAVINYGDGLHLPPQLQGLHFVV*WAHSCR
Trigger: TCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAA...TCCCTGCAGTTGGGGAGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
3UTR-3UTR CCA 90 bp CAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCCAGTCCAATGATTGCACTTTGTaGTCTGGTGGGCACACTCTT +
Preference number: 2 (lower is better)
Translates to: QRAGSLVRLSYFRSPFQSNDCTL*SGGHTL
Trigger: AAGAGTGTGCCCACCAGACCACAAAGTGCAATCATT...GGACTGGAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
3UTR-3UTR TCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTAGGGTTGTGCGAAAATaGCTGCTACAAGGGGTAGAA +
Preference number: 2 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPRVVRK*LLQGVE
Trigger: TTCTACCCCTTGTAGCAGTCATTTTCGCACAACCCT...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR TCA 90 bp CTGGACTCTGGAGTCCCTTCTCAGCAGTCGCCATGTATAACTAGGAAGCACTCGGAGAGTAGCCAACATTaGCGAGCACTTACTTATACC +
Preference number: 2 (lower is better)
Translates to: LDSGVPSQQSPCITRKHSESSQH*RALTYT
Trigger: GGTATAAGTAAGTGCTCGTCAATGTTGGCTACTCTC...CGAGTGCTTCCTAGTTATACATGGCGACTGCTGAGAAGGGACTCCAGAGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR GCA 90 bp CTTTATTCATTGGTTAATTTTCCTAACAGCGTTGTAAACCCAGGCCGGGATGTCGGCCCTCCCTGCAGCTaGGATCCCTGTGGGTCATTT +
Preference number: 2 (lower is better)
Translates to: LYSLVNFPNSVVNPGRDVGPPCS*DPCGSF
Trigger: AAATGACCCACAGGGATCGCAGCTGCAGGGAGGGCC...GACATCCCGGCCTGGGTTTACAACGCTGTTAGGAAAATTAACCAATGAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR GCA 90 bp GGAGGATTTCTGCGCATGCGCCCTATCTATTGGCGTGAAACGGCTGCTGGGTCCCTGCGCACTGAACGTTaGTTTATTCATTGGTTAATT +
Preference number: 2 (lower is better)
Translates to: GGFLRMRPIYWRETAAGSLRTER*FIHWLI
Trigger: AATTAACCAATGAATAAAGCAACGTTCAGTGCGCAG...GGACCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCATGCGCAGAAATCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CCA 90 bp ATGAATGAATCGGGCAAGGGAGACAGAGTTGGGGTTAGTGATTACAACAGGAGGTGCCCTGATCAAAGATaGCGGAAGACAACCCACCAG +
Preference number: 2 (lower is better)
Translates to: MNESGKGDRVGVSDYNRRCPDQR*RKTTHQ
Trigger: CTGGTGGGTTGTCTTCCGCCATCTTTGATCAGGGCA...CCTCCTGTTGTAATCACTAACCCCAACTCTGTCTCCCTTGCCCGATTCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR TCA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGGAAGCTCTGAGTCACTaGCAATCATTAGTAATCAAA +
Preference number: 2 (lower is better)
Translates to: LRSLWVISLALCLHGEQREALSH*QSLVIK
Trigger: TTTGATTACTAATGATTGTCAGTGACTCAGAGCTTC...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR GCA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTaGGAAAATGACTGCTACAAG +
Preference number: 2 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLWASGL*ENDCYK
Trigger: CTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCA...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp AGCTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCACAGCTTCGCTGTCCCTaGACAGGTGAAGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: SYPATPHCDLNLCVHLGAQLRCP*TGEVGT
Trigger: TGTGCCAACTTCACCTGTCCAGGGACAGCGAAGCTG...TGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CCA 90 bp ACGTTGCTTTATTCATTGGTTAATTTTCCTAACAGCGTTGTAAACCCAGGCCGGGGCGCTTTGTTTGCATaGAGAACAGCGGGTGGGTAC +
Preference number: 2 (lower is better)
Translates to: TLLYSLVNFPNSVVNPGRGALFA*RTAGGY
Trigger: GTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCC...CCGGCCTGGGTTTACAACGCTGTTAGGAAAATTAACCAATGAATAAAGCAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR GCA 90 bp ATGAATGAATCGGGCAAGGGAGACAGAGTTGGGGTTAGTGATTACAACAGGAGGCTGAAACACCGGCAATaGTGGCGTGGAATTATTAGA +
Preference number: 2 (lower is better)
Translates to: MNESGKGDRVGVSDYNRRLKHRQ*WRGIIR
Trigger: TCTAATAATTCCACGCCAGCATTGCCGGTGTTTCAG...CCTCCTGTTGTAATCACTAACCCCAACTCTGTCTCCCTTGCCCGATTCATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CCA 90 bp ACGTTGCTTTATTCATTGGTTAATTTTCCTAACAGCGTTGTAAACCCAGGCCGGCCAGCCCAGTTTCTTTaGGCTTCAGGGTTGTGCGAA +
Preference number: 2 (lower is better)
Translates to: TLLYSLVNFPNSVVNPGRPAQFL*ASGLCE
Trigger: TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG...CCGGCCTGGGTTTACAACGCTGTTAGGAAAATTAACCAATGAATAAAGCAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR TCA 90 bp ATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCATCTGCTTACCTTGTaGTCCCATGCCCACCCAGCC +
Preference number: 2 (lower is better)
Translates to: ILIFLCKLPAHSLCPFFGHLLTL*SHAHPA
Trigger: GGCTGGGTGGGCATGGGATCACAAGGTAAGCAGATG...ACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR-3UTR TCA 90 bp AAATGTCTGTTTCCCATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGCGTGTTGAACCCCTGTaGTCGCCTAGGACTGTGACT +
Preference number: 2 (lower is better)
Translates to: KCLFPILIFLCKLPAHSLRVEPL*SPRTVT
Trigger: AGTCACAGTCCTAGGCGATCACAGGGGTTCAACACG...CAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAACAGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR-3UTR TCA 90 bp AAATGTCTGTTTCCCATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGCCAGTTCTGTCTCTGTaGCCTCTGGGAAGGAGCATC +
Preference number: 2 (lower is better)
Translates to: KCLFPILIFLCKLPAHSLPVLSL*PLGRSI
Trigger: GATGCTCCTTCCCAGAGGTCACAGAGACAGAACTGG...CAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAACAGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR-3UTR TCA 90 bp AAATGTCTGTTTCCCATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGGTCAGCTGGGAGATaGGTGAAACTCAGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: KCLFPILIFLCKLPAHSLWSAGR*VKLRGE
Trigger: TTCACCCCTGAGTTTCACTCATCTCCCAGCTGACCA...CAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAACAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR CAA 90 bp GAGATTAAGCACCTTTTCAAATGTCTGTTTCCCATTCTTATATTCTaGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCAG +
Preference number: 2 (lower is better)
Translates to: EIKHLFKCLFPILIF*CKLPAHSLCPFFGQ
Trigger: CTGACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAACAGACATTTGAAAAGGTGCTTAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR-3UTR CCA 90 bp ATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCTGCTGTTAACCAGTTaGGTCACCATAAACAAGTCT +
Preference number: 2 (lower is better)
Translates to: ILIFLCKLPAHSLCPFFGLLLTS*VTINKS
Trigger: AGACTTGTTTATGGTGACCCAACTGGTTAACAGCAG...ACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR TCA 72 bp CTCACACTTGGCTCGCACGGGCTACGCGGCACGTACTaGGCAGCTGGCGGGGCAGGGTCTCCGCCGTCACTG +
Preference number: 3 (lower is better)
Translates to: LTLGSHGLRGTY*AAGGAGSPPSL
Trigger: CAGTGACGGCGGAGACCCTGCCCCGCCAGCTGCTCAGTACGTGCCGCGTAGCCCGTGCGAGCCAAGTGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CCA 72 bp GTGCTAGCTCCGCAGGCGCTCGCCCGGACTCACACTTaGCTCGCACGGGCTACGCGGCACGTACTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: VLAPQALARTHT*LARATRHVLSS
Trigger: GCTGCTCAGTACGTGCCGCGTAGCCCGTGCGAGCCAAGTGTGAGTCCGGGCGAGCGCCTGCGGAGCTAGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 72 bp CTGGCCTTTGCCCTGAGCTCCCTCAGCTTCGCAAGATaGGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGAG +
Preference number: 3 (lower is better)
Translates to: LAFALSSLSFAR*ASQTGPGPGSE
Trigger: CTCAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGCTCAGGGCAAAGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR TCA 72 bp GGCCCCTTCCGGTCCGCGCTAGCCTGGCCTTTGCCCTaGGCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: GPFRSALAWPLP*APSASQDELPR
Trigger: TCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGCTCAGGGCAAAGGCCAGGCTAGCGCGGACCGGAAGGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp CCAGCACCTGTGGTTCGTTGGCGGGGCTCGTGGGATTaGGGTAAGGGCTGTGGTTTCGAGGCCGTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: PAPVVRWRGSWD*GKGCGFEAVCG
Trigger: GCCACAGACGGCCTCGAAACCACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACGAACCACAGGTGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp GGCCTGGCTCTGAGGGAAAGGCGTTCCCGCCAGGTCTaGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: GLALRERRSRQV*GRLPMFSKAQH
Trigger: GTGCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTTCCCTCAGAGCCAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp GGAAGCGGGTTGGCGGGCACCGCGGGACACTCAGACTaGCAAACACCCTCTCCGAGTGCTGCTCTCTTGATC +
Preference number: 3 (lower is better)
Translates to: GSGLAGTAGHSD*QTPSPSAALLI
Trigger: GATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR TCA 72 bp GGGTCCCTGACGCCGTCTGAGTTTGGGCCTCTTGAGTaGGAGGCAGCGAGGAGCCTAGCGGTGGGCATTGAA +
Preference number: 3 (lower is better)
Translates to: GSLTPSEFGPLE*EAARSLAVGIE
Trigger: TTCAATGCCCACCGCTAGGCTCCTCGCTGCCTCTCACTCAAGAGGCCCAAACTCAGACGGCGTCAGGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 72 bp AGGAGGATTTCTGCGCATGCGCCCTATCTATTGGCGTaGAACGGCTGCTGGGTCCGGGTCCCTGACGCCGTC +
Preference number: 3 (lower is better)
Translates to: RRISAHAPYLLA*NGCWVRVPDAV
Trigger: GACGGCGTCAGGGACCCGGACCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCATGCGCAGAAATCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CCA 72 bp GGCCGCCTTCCCATGTTCTCTAAAGCCCAGCACCTGTaGTTCGTTGGCGGGGCTCGTGGGATTGGGGTAAGG +
Preference number: 3 (lower is better)
Translates to: GRLPMFSKAQHL*FVGGARGIGVR
Trigger: CCTTACCCCAATCCCACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTTAGAGAACATGGGAAGGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp AGCCGAGGAGGATTTCTGCGCATGCGCCCTATCTATTaGCGTGAAACGGCTGCTGGGTCCGGGTCCCTGACG +
Preference number: 3 (lower is better)
Translates to: SRGGFLRMRPIY*RETAAGSGSLT
Trigger: CGTCAGGGACCCGGACCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCATGCGCAGAAATCCTCCTCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 72 bp TCTATTGGCGTGAAACGGCTGCTGGGTCCGGGTCCCTaGCGCCGTCTGAGTTTGGGCCTCTTGAGTGAGAGG +
Preference number: 3 (lower is better)
Translates to: SIGVKRLLGPGP*RRLSLGLLSER
Trigger: CCTCTCACTCAAGAGGCCCAAACTCAGACGGCGTCAGGGACCCGGACCCAGCAGCCGTTTCACGCCAATAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR GCA 72 bp CGCCGACCGGCACCTGAACTCCCTGCACGCGTTGCATaGCTCCCACAGAGATGGGACTGCTTAGTAAGACCT +
Preference number: 3 (lower is better)
Translates to: RRPAPELPARVA*LPQRWDCLVRP
Trigger: AGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp AAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCTCCAGCCCAGTTTCTTaGGGCTTCAGGGTTGTGCGA +
Preference number: 3 (lower is better)
Translates to: KGVPARSGAAFPCSLKPSSSPVS*GFRVVR
Trigger: TCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGA...GCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp CAGCGTTGTAAACCCAGGCCGGGATGTCCTGAGCGTTCTGGCAGAGGCCCGTGCCATTTCCCTGGCGCTTaGTTTGCATGGAGAACAGCG +
Preference number: 3 (lower is better)
Translates to: QRCKPRPGCPERSGRGPCHFPGA*FAWRTA
Trigger: CGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATG...GCACGGGCCTCTGCCAGAACGCTCAGGACATCCCGGCCTGGGTTTACAACGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR TCA 72 bp GAGGCCAGCCTGTCTACCGAGTGGGAAGATGTGTGCTaGCTCAGGCCACCTCCTGAGACCTGGGAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: EASLSTEWEDVC*LRPPPETWEKP
Trigger: TGGCTTTTCCCAGGTCTCAGGAGGTGGCCTGAGTCAGCACACATCTTCCCACTCGGTAGACAGGCTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR GCA 72 bp TGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTaGTCAGGTCAGTCAGGAAGCGGGTTGGCGGGCACC +
Preference number: 3 (lower is better)
Translates to: CLPQRWDCLVRP*SGQSGSGLAGT
Trigger: GGTGCCCGCCAACCCGCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp CCTCCCTGCAGCTGCGATCCCTGTGGGTCATTTCCCTaGCGCTTTGTTTGCATGGAGAACAGCGGGTGGGTA +
Preference number: 3 (lower is better)
Translates to: PPCSCDPCGSFP*RFVCMENSGWV
Trigger: TACCCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAGCTGCAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp CAACCTCCCTGGCCCTCCCTGCAGCTGCGATCCCTGTaGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAA +
Preference number: 3 (lower is better)
Translates to: QPPWPSLQLRSL*VISLALCLHGE
Trigger: TTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAGCTGCAGGGAGGGCCAGGGAGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp CGCCTTCCCATGTTCTCTAAAGCCCAGCACCTGTGGTTCGTTGGCGGGGCTCGTTCCAGCCCAGTTTCTTaGGGCTTCAGGGTTGTGCGA +
Preference number: 3 (lower is better)
Translates to: RLPMFSKAQHLWFVGGARSSPVS*GFRVVR
Trigger: TCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGA...ACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTTAGAGAACATGGGAAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp AAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCCATTTCCCTGGCGCTTaGTTTGCATGGAGAACAGCG +
Preference number: 3 (lower is better)
Translates to: KGVPARSGAAFPCSLKPSHFPGA*FAWRTA
Trigger: CGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATG...GCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp CAGCGTTGTAAACCCAGGCCGGGATGTCCTGAGCGTTCTGGCAGAGGCCCGTGCCTGCTTAGTAAGACCTaGCTCAGGTCAGTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: QRCKPRPGCPERSGRGPCLLSKT*LRSVRK
Trigger: CTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAG...GCACGGGCCTCTGCCAGAACGCTCAGGACATCCCGGCCTGGGTTTACAACGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR GCA 72 bp TGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTaGATGGAGAACAGCGGGTGGGTACCCGAAGTCCCA +
Preference number: 3 (lower is better)
Translates to: CDPCGSFPWRFV*MENSGWVPEVP
Trigger: TGGGACTTCGGGTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp ACAATCCTGGGTTCAAATCCTAGCTGTGCCGCCTACTaGCTGTTAGCCTCCCTGAGCCCCAGTTCCCACGTC +
Preference number: 3 (lower is better)
Translates to: TILGSNPSCAAY*LLASLSPSSHV
Trigger: GACGTGGGAACTGGGGCTCAGGGAGGCTAACAGCCAGTAGGCGGCACAGCTAGGATTTGAACCCAGGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 72 bp TTTGTCTCGGGGTTGCTCACATGGAGGACTGCTTGGTaGGAGGCCGGTAGCACTGAAAAGGGCACTGGACGA +
Preference number: 3 (lower is better)
Translates to: FVSGLLTWRTAW*EAGSTEKGTGR
Trigger: TCGTCCAGTGCCCTTTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR GCA 72 bp CCTGCACGCGTTGCATGCCTCCCACAGAGATGGGACTaGTTAGTAAGACCTTGCTCAGGTCAGTCAGGAAGC +
Preference number: 3 (lower is better)
Translates to: PARVACLPQRWD*LVRPCSGQSGS
Trigger: GCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp ATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATaGAGAACAGCGGGTGGGTACCCGAAGTCCCAGGAA +
Preference number: 3 (lower is better)
Translates to: IPVGHFPGALFA*RTAGGYPKSQE
Trigger: TTCCTGGGACTTCGGGTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp CTGGACTCTGGAGTCCCTTCTCAGCAGTCGCCATGTATAACTAGGAAGCACTCGTCCCTGGCGCTTTGTTaGCATGGAGAACAGCGGGTG +
Preference number: 3 (lower is better)
Translates to: LDSGVPSQQSPCITRKHSSLALC*HGEQRV
Trigger: CACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGA...CGAGTGCTTCCTAGTTATACATGGCGACTGCTGAGAAGGGACTCCAGAGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CCA 72 bp GAACTCCCTGCACGCGTTGCATGCCTCCCACAGAGATaGGACTGCTTAGTAAGACCTTGCTCAGGTCAGTCA +
Preference number: 3 (lower is better)
Translates to: ELPARVACLPQR*DCLVRPCSGQS
Trigger: TGACTGACCTGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp CGCAGCGGTTCCCACCCCCTGAAACACCGGCAATGCTaGCGTGGAATTATTAGACAGTCCCTAAAACCACGT +
Preference number: 3 (lower is better)
Translates to: RSGSHPLKHRQC*RGIIRQSLKPR
Trigger: ACGTGGTTTTAGGGACTGTCTAATAATTCCACGCCAGCATTGCCGGTGTTTCAGGGGGTGGGAACCGCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CAA 90 bp TCTCGGGGTTGCTCACATGGAGGACTGCTTGGTGAGAGGCCGGTAGCACTGAAACTTTGGGCTTCAGGGTaGTGCGAAAATGACTGCTAC +
Preference number: 3 (lower is better)
Translates to: SRGCSHGGLLGERPVALKLWASG*CENDCY
Trigger: GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAG...TTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR TCA 72 bp AGACCTGGACCAGAAAGCAGACGTGTTGAACCCCTGTaGTCGCCTAGGACTGTGACTCACCCATACCTAGGA +
Preference number: 3 (lower is better)
Translates to: RPGPESRRVEPL*SPRTVTHPYLG
Trigger: TCCTAGGTATGGGTGAGTCACAGTCCTAGGCGATCACAGGGGTTCAACACGTCTGCTTTCTGGTCCAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR TCA 72 bp GGTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTaGTCCCATGCCCACCCAGCCAGTTCTGTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: GEGCTFEHLLTL*SHAHPASSVSV
Trigger: CACAGAGACAGAACTGGCTGGGTGGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR GCA 72 bp GAACGCAGCGGTTCCCACCCCCTGAAACACCGGCAATaGTGGCGTGGAATTATTAGACAGTCCCTAAAACCA +
Preference number: 3 (lower is better)
Translates to: ERSGSHPLKHRQ*WRGIIRQSLKP
Trigger: TGGTTTTAGGGACTGTCTAATAATTCCACGCCAGCATTGCCGGTGTTTCAGGGGGTGGGAACCGCTGCGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CCA 72 bp GACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTaGGGACTCCTTAGGTATTTGATAGACACGGAGACC +
Preference number: 3 (lower is better)
Translates to: DRQILSRWPASS*GLLRYLIDTET
Trigger: GGTCTCCGTGTCTATCAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp TTGGCGGGTATAATTGAGCGGCGTTGGAGACAATCCTaGGTTCAAATCCTAGCTGTGCCGCCTACTGGCTGT +
Preference number: 3 (lower is better)
Translates to: LAGIIERRWRQS*VQILAVPPTGC
Trigger: ACAGCCAGTAGGCGGCACAGCTAGGATTTGAACCCAGGATTGTCTCCAACGCCGCTCAATTATACCCGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CCA 72 bp CTCTGTGACTCCTTGGCGGGTATAATTGAGCGGCGTTaGAGACAATCCTGGGTTCAAATCCTAGCTGTGCCG +
Preference number: 3 (lower is better)
Translates to: LCDSLAGIIERR*RQSWVQILAVP
Trigger: CGGCACAGCTAGGATTTGAACCCAGGATTGTCTCCAACGCCGCTCAATTATACCCGCCAAGGAGTCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CCA 72 bp TCTCCATGTCTTACACCTGAAACCCTCCCACCAGCCTaGGAGCCCGTTTTACAGGTGAGAAAATGGAGGCAC +
Preference number: 3 (lower is better)
Translates to: SPCLTPETLPPA*EPVLQVRKWRH
Trigger: GTGCCTCCATTTTCTCACCTGTAAAACGGGCTCCCAGGCTGGTGGGAGGGTTTCAGGTGTAAGACATGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CAA 90 bp TTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGCCAAATGATTGCACTTaGTGGTCTGGTGGGCACACT +
Preference number: 3 (lower is better)
Translates to: FVVWWAHSCRSSSHSRILPNDCT*WSGGHT
Trigger: AGTGTGCCCACCAGACCACAAAGTGCAATCATTTGG...CAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
3UTR TCA 72 bp GGTGGGTACCCGAAGTCCCAGGAAGCTCTGAGTCACTaGCAATCATTAGTAATCAAAGAGGCAGGCCGTGTG +
Preference number: 3 (lower is better)
Translates to: GGYPKSQEALSH*QSLVIKEAGRV
Trigger: CACACGGCCTGCCTCTTTGATTACTAATGATTGTCAGTGACTCAGAGCTTCCTGGGACTTCGGGTACCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR TCA 72 bp CAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTaGTCCCACTTAGCATTTTTGTCTCGGGGTTGCTCA +
Preference number: 3 (lower is better)
Translates to: QTGKHPLRVLLS*SHLAFLSRGCS
Trigger: TGAGCAACCCCGAGACAAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CCA 72 bp TGGCACAGTTTACAGGACAGACAGATCCTATCACGATaGCCAGCCAGCTCCTGGGGACTCCTTAGGTATTTG +
Preference number: 3 (lower is better)
Translates to: WHSLQDRQILSR*PASSWGLLRYL
Trigger: CAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp GGAATTATTAGACAGTCCCTAAAACCACGTGATCGCTGCTCCTCCGCCTCCCTCGGACTCCTTAGGTATTaGATAGACACGGAGACCCAC +
Preference number: 3 (lower is better)
Translates to: GIIRQSLKPRDRCSSASLGLLRY*IDTETH
Trigger: GTGGGTCTCCGTGTCTATCAAATACCTAAGGAGTCC...GAGGGAGGCGGAGGAGCAGCGATCACGTGGTTTTAGGGACTGTCTAATAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CAA 90 bp TGCACGCGTTGCATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTGCTCTCCCACTTAGCATTTTaGTCTCGGGGTTGCTCACAT +
Preference number: 3 (lower is better)
Translates to: CTRCMPPTEMGLLSKTLLSHLAF*SRGCSH
Trigger: ATGTGAGCAACCCCGAGACAAAAATGCTAAGTGGGA...GAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp ATGAATGAATCGGGCAAGGGAGACAGAGTTGGGGTTAGTGATTACAACAGGAGGAACTCCCTGCACGCGTaGCATGCCTCCCACAGAGAT +
Preference number: 3 (lower is better)
Translates to: MNESGKGDRVGVSDYNRRNSLHA*HASHRD
Trigger: ATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGTT...CCTCCTGTTGTAATCACTAACCCCAACTCTGTCTCCCTTGCCCGATTCATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR-3UTR CAA 90 bp TTCTGTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCCAGAAAGCAGACGTGTaGAACCCCTGTGATCGCCTA +
Preference number: 3 (lower is better)
Translates to: FCLCDLWEGASPRNICPVQKADV*NPCDRL
Trigger: TAGGCGATCACAGGGGTTCAACACGTCTGCTTTCTG...GACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR-3UTR CAA 90 bp CTTGAGGCCAAGCCCCTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTCCAAATGATTGCACTTaGTGGTCTGGTGGGCACACT +
Preference number: 3 (lower is better)
Translates to: LEAKPLAVINYGDGLHLPPNDCT*WSGGHT
Trigger: AGTGTGCCCACCAGACCACAAAGTGCAATCATTTGG...AGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAGGGGCTTGGCCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
3UTR TCA 72 bp TCGCCTAGGACTGTGACTCACCCATACCTAGGAGTATaGGATCAAAGTCCCACCCTGCTGTTAACCAGTTGG +
Preference number: 3 (lower is better)
Translates to: SPRTVTHPYLGV*DQSPTLLLTSW
Trigger: CCAACTGGTTAACAGCAGGGTGGGACTTTGATCTCATACTCCTAGGTATGGGTGAGTCACAGTCCTAGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR TCA 72 bp TACATGTTCGCTAAAGGACTCTCCATGTCTTACACCTaGAACCCTCCCACCAGCCTGGGAGCCCGTTTTACA +
Preference number: 3 (lower is better)
Translates to: YMFAKGLSMSYT*NPPTSLGARFT
Trigger: TGTAAAACGGGCTCCCAGGCTGGTGGGAGGGTTTCAGGTGTAAGACATGGAGAGTCCTTTAGCGAACATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR TCA 72 bp AGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTaGAACTCAGGGGTGAAGGCTGCACTTTTGAGCATC +
Preference number: 3 (lower is better)
Translates to: SLCPFFGQLGDE*NSGVKAALLSI
Trigger: GATGCTCAAAAGTGCAGCCTTCACCCCTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATGGACACAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR-3UTR CAA 90 bp CTTTATTCATTGGTTAATTTTCCTAACAGCGTTGTAAACCCAGGCCGGGATGTCTCCCTGGCGCTTTGTTaGCATGGAGAACAGCGGGTG +
Preference number: 3 (lower is better)
Translates to: LYSLVNFPNSVVNPGRDVSLALC*HGEQRV
Trigger: CACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGA...GACATCCCGGCCTGGGTTTACAACGCTGTTAGGAAAATTAACCAATGAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp CTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTGAAACTCAGCCTGCTGTTAACCAGTaGGGTCACCATAAACAAGTC +
Preference number: 3 (lower is better)
Translates to: LLIVCVHSLVSWEMSETQPAVNQ*GHHKQV
Trigger: GACTTGTTTATGGTGACCCAACTGGTTAACAGCAGG...CTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR GCA 72 bp TCTGATCCCCACCGTAACTCTAGCAACCAGCTACCCTaGTACTCCTCATTGCGATCTAAACTTATGTGTTCA +
Preference number: 3 (lower is better)
Translates to: SDPHRNSSNQLP*YSSLRSKLMCS
Trigger: TGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCTGGTTGCTAGAGTTACGGTGGGGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR-3UTR CAA 90 bp AGCTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCAGGACTCCTTAGGTATTaGATAGACACGGAGACCCAC +
Preference number: 3 (lower is better)
Translates to: SYPATPHCDLNLCVHLGAGLLRY*IDTETH
Trigger: GTGGGTCTCCGTGTCTATCAAATACCTAAGGAGTCC...TGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR GCA 72 bp AATGTCTGTTTCCCATTCTTATATTCTTGTGTAAACTaGCTGCTCATAGTCTGTGTCCATTCTTTGGTCAGC +
Preference number: 3 (lower is better)
Translates to: NVCFPFLYSCVN*LLIVCVHSLVS
Trigger: GCTGACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAACAGACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp GCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGGGGGGCCTCCAGGCCTaGCTACGCCGACCGGCACCT +
Preference number: 4 (lower is better)
Translates to: APSASQDELPRRGRGLALGGLQA*LRRPAP
Trigger: AGGTGCCGGTCGGCGTAGCCAGGCCTGGAGGCCCCC...CAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTCCAGGCCTGGCTACGCCGACCGGCACCTGAACTCCCTGCACGCGTTGCATGCCTCCCTGGCCCTCCCTaGAGCTGCGATCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LQAWLRRPAPELPARVACLPGPP*SCDPCG
Trigger: CCCACAGGGATCGCAGCTGCAGGGAGGGCCAGGGAG...GCATGCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCGTAGCCAGGCCTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CTCCAGGCCTGGCTACGCCGACCGGCACCTGAACTCCCTGCACGCGTTGCATGCAGTCAGGAAGCGGGTTaGCGGGCACCGCGGGACACT +
Preference number: 4 (lower is better)
Translates to: LQAWLRRPAPELPARVACSQEAG*RAPRDT
Trigger: AGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGACT...GCATGCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCGTAGCCAGGCCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 72 bp AGTGCTAGCTCCGCAGGCGCTCGCCCGGACTCACACTaGGCTCGCACGGGCTACGCGGCACGTACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SASSAGARPDSH*ARTGYAARTEQ
Trigger: CTGCTCAGTACGTGCCGCGTAGCCCGTGCGAGCCAAGTGTGAGTCCGGGCGAGCGCCTGCGGAGCTAGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp CGCCTTCCCATGTTCTCTAAAGCCCAGCACCTGTGGTTCGTTGGCGGGGCTCGTGCCGGGGCCTGGCTCTaGGGGAAAGGCGTTCCCGCC +
Preference number: 4 (lower is better)
Translates to: RLPMFSKAQHLWFVGGARAGAWL*GKGVPA
Trigger: GGCGGGAACGCCTTTCCCTCAGAGCCAGGCCCCGGC...ACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTTAGAGAACATGGGAAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CAGCACCTGTGGTTCGTTGGCGGGGCTCGTGGGATTGGGGTAAGGGCTGTGGTTTCTGGCAGAGGCCCGTaGAGCCTCGGCCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: QHLWFVGGARGIGVRAVVSGRGP*SLGPFR
Trigger: CCGGAAGGGGCCGAGGCTGCACGGGCCTCTGCCAGA...AACCACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACGAACCACAGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGGCTGGGCTTGTAGGTTaGGGAGGGTGGTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: APSASQDELPRRGRGLALAGLVG*GGWWVG
Trigger: TCCCACCCACCACCCTCCCCAACCTACAAGCCCAGC...CAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp CAGCACCTGTGGTTCGTTGGCGGGGCTCGTGGGATTGGGGTAAGGGCTGTGGTTCACGTACTGAGCAGCTaGCGGGGCAGGGTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: QHLWFVGGARGIGVRAVVHVLSS*RGRVSA
Trigger: GGCGGAGACCCTGCCCCGCCAGCTGCTCAGTACGTG...AACCACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACGAACCACAGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp GCGGCACGTACTGAGCAGCTGGCGGGGCAGGGTCTCCGCCGTCACTGTGAAGGCTGGGAGGTAGGTGCCTaGACTCTGGAGTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: AARTEQLAGQGLRRHCEGWEVGA*TLESLL
Trigger: GAGAAGGGACTCCAGAGTCCAGGCACCTACCTCCCA...GCCTTCACAGTGACGGCGGAGACCCTGCCCCGCCAGCTGCTCAGTACGTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp CTCCAGGCCTGGCTACGCCGACCGGCACCTGAACTCCCTGCACGCGTTGCATGCTCAGATCGCCGACTCTaGCGCTCATCGTGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: LQAWLRRPAPELPARVACSDRRL*RSSWLN
Trigger: GTTGAGCCACGATGAGCGGCAGAGTCGGCGATCTGA...GCATGCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCGTAGCCAGGCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GTCAGGAAGCGGGTTGGCGGGCACCGCGGGACACTCAGACTGGCAAACACCCTCGGCCCTCCCTGCAGCTaGGATCCCTGTGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: VRKRVGGHRGTLRLANTLGPPCS*DPCGSF
Trigger: AAATGACCCACAGGGATCGCAGCTGCAGGGAGGGCC...GAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp ATGCGCCCTATCTATTGGCGTGAAACGGCTGCTGGGTCCGGGTCCCTGACGCCGGCACCTGTGGTTCGTTaGCGGGGCTCGTGGGATTGG +
Preference number: 4 (lower is better)
Translates to: MRPIYWRETAAGSGSLTPAPVVR*RGSWDW
Trigger: CCAATCCCACGAGCCCCGCCAACGAACCACAGGTGC...CGGCGTCAGGGACCCGGACCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp CGCCTTCCCATGTTCTCTAAAGCCCAGCACCTGTGGTTCGTTGGCGGGGCTCGTTCTCCGCCGTCACTGTaGAGGCCGTGGGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: RLPMFSKAQHLWFVGGARSPPSL*RPWGAS
Trigger: GGATGCTCCCCACGGCCTTCACAGTGACGGCGGAGA...ACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTTAGAGAACATGGGAAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAACTACGCGGCACGTACTaGGCAGCTGGCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCELRGTY*AAGGAG
Trigger: CCCTGCCCCGCCAGCTGCTCAGTACGTGCCGCGTAG...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp CAGCACCTGTGGTTCGTTGGCGGGGCTCGTGGGATTGGGGTAAGGGCTGTGGTTGCCAATGCCTCCTTCTaGCTGGGGCTCAGATCGCCG +
Preference number: 4 (lower is better)
Translates to: QHLWFVGGARGIGVRAVVANASF*LGLRSP
Trigger: CGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGC...AACCACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACGAACCACAGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTCCAGGCCTGGCTACGCCGACCGGCACCTGAACTCCCTGCACGCGTTGCATGCGGTGTTATTTCGGGGTaGCTGCCCCCAGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LQAWLRRPAPELPARVACGVISG*LPPAVS
Trigger: TGAAACAGCTGGGGGCAGGCACCCCGAAATAACACC...GCATGCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCGTAGCCAGGCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CGTGAAACGGCTGCTGGGTCCGGGTCCCTGACGCCGTCTGAGTTTGGGCCTCTTGAAGCCTTCCCCCGCTaGACCTCAGTTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: RETAAGSGSLTPSEFGPLEAFPR*TSVHPG
Trigger: ACCTGGGTGAACTGAGGTCCAGCGGGGGAAGGCTTC...AAGAGGCCCAAACTCAGACGGCGTCAGGGACCCGGACCCAGCAGCCGTTTCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp GCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATGGCGGGTGCGGCAGCTaGTGGAGCACAGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: ALCGLVGTLLQKQLTLPHGGCGS*WSTDSS
Trigger: GGACGAGTCTGTGCTCCATCAGCTGCCGCACCCGCC...ATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR TCA 90 bp TCTCGGGGTTGCTCACATGGAGGACTGCTTGGTGAGAGGCCGGTAGCACTGAAAGGCGGGTGCGGCAGCTaGTGGAGCACAGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: SRGCSHGGLLGERPVALKGGCGS*WSTDSS
Trigger: GGACGAGTCTGTGCTCCATCAGCTGCCGCACCCGCC...TTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp GGCACCGCGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGGCTTCCAGAGATGCTTaGGGCCAAGCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GTAGHSDWQTPSPSAALLASRDA*GQAPRS
Trigger: ACTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGC...CAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp GAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGGCCGGGGCCTGGCTCTaGGGGAAAGGCGTTCCCGCC +
Preference number: 4 (lower is better)
Translates to: EMKAPEVCPPAQFLWASGAGAWL*GKGVPA
Trigger: GGCGGGAACGCCTTTCCCTCAGAGCCAGGCCCCGGC...CCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TCTCGGGGTTGCTCACATGGAGGACTGCTTGGTGAGAGGCCGGTAGCACTGAAACTGGGTCCGGGTCCCTaGCGCCGTCTGAGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SRGCSHGGLLGERPVALKLGPGP*RRLSLG
Trigger: GCCCAAACTCAGACGGCGTCAGGGACCCGGACCCAG...TTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp GCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGGAGCCACGGGAAATCTaGACGCTGTGTTCATACTGC +
Preference number: 4 (lower is better)
Translates to: APSASQDELPRRGRGLALEPREI*TLCSYC
Trigger: GCAGTATGAACACAGCGTGCAGATTTCCCGTGGCTC...CAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp AAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCCCTGCACGCGTTGCATaGCTCCCACAGAGATGGGAC +
Preference number: 4 (lower is better)
Translates to: KGVPARSGAAFPCSLKPSPARVA*LPQRWD
Trigger: GTCCCATCTCTGTGGGAGGCATGCAACGCGTGCAGG...GCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp TCACGATGGCCAGCCAGCTCCTGGGGACTCCTTAGGTATTTGATAGACACGGAGTCTGGCAGAGGCCCGTaGAGCCTCGGCCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SRWPASSWGLLRYLIDTESGRGP*SLGPFR
Trigger: CCGGAAGGGGCCGAGGCTGCACGGGCCTCTGCCAGA...CTCCGTGTCTATCAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CAGCACCTGTGGTTCGTTGGCGGGGCTCGTGGGATTGGGGTAAGGGCTGTGGTTGTCCTGTTTGGAGGCTaGGAACAGCAGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QHLWFVGGARGIGVRAVVVLFGG*EQQTLG
Trigger: GCCAAGGGTCTGCTGTTCTCAGCCTCCAAACAGGAC...AACCACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACGAACCACAGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp AAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCTGGGAAGATGTGTGCTaGCTCAGGCCACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KGVPARSGAAFPCSLKPSWEDVC*LRPPPE
Trigger: CTCAGGAGGTGGCCTGAGTCAGCACACATCTTCCCA...GCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CGAGCTCTAAATGAGGCTAGAGGAGTGAACGGTGAGCCCCTGGGAGGTAGGTGCCTCAGCTTCGCAAGATaGGCTTCCCAGACGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RALNEARGVNGEPLGGRCLSFAR*ASQTGP
Trigger: CGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAG...GCACCTACCTCCCAGGGGCTCACCGTTCACTCCTCTAGCCTCATTTAGAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp CGCCTTCCCATGTTCTCTAAAGCCCAGCACCTGTGGTTCGTTGGCGGGGCTCGTGTCCCTAAAACCACGTaGTCGCTGCTCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RLPMFSKAQHLWFVGGARVPKTT*SLLLRL
Trigger: GAGGCGGAGGAGCAGCGATCACGTGGTTTTAGGGAC...ACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTTAGAGAACATGGGAAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp TACAACAGGAGGAAGCCTTCCCCCGCTGGACCTCAGTTCACCCAGGTGAGCAATGCGGTTCCCACCCCCTaGAACACCGGCAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: YNRRKPSPAGPQFTQVSNAVPTP*NTGNAG
Trigger: GCCAGCATTGCCGGTGTTTCAGGGGGTGGGAACCGC...ATTGCTCACCTGGGTGAACTGAGGTCCAGCGGGGGAAGGCTTCCTCCTGTTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp TCACGATGGCCAGCCAGCTCCTGGGGACTCCTTAGGTATTTGATAGACACGGAGCTCCCTGGCCCTCCCTaGAGCTGCGATCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SRWPASSWGLLRYLIDTELPGPP*SCDPCG
Trigger: CCCACAGGGATCGCAGCTGCAGGGAGGGCCAGGGAG...CTCCGTGTCTATCAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TCTCGGGGTTGCTCACATGGAGGACTGCTTGGTGAGAGGCCGGTAGCACTGAAACTCTGCCGCTCATCGTaGCTCAACCGCGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SRGCSHGGLLGERPVALKLCRSS*LNRGDG
Trigger: CCCATCCCCGCGGTTGAGCCACGATGAGCGGCAGAG...TTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GTCAGGAAGCGGGTTGGCGGGCACCGCGGGACACTCAGACTGGCAAACACCCTCCCCAACTTTGTGGTCTaGTGGGCACACTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: VRKRVGGHRGTLRLANTLPNFVV*WAHSCR
Trigger: TCTGCAAGAGTGTGCCCACCAGACCACAAAGTTGGG...GAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp AGGGAAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCATGGAGAACAGCGGGTaGGTACCCGAAGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RERRSRQVWGRLPMFSKAMENSG*VPEVPG
Trigger: TCCTGGGACTTCGGGTACCCACCCGCTGTTCTCCAT...GGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAGTCAGGAAGCGGGTTaGCGGGCACCGCGGGACACT +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCESQEAG*RAPRDT
Trigger: AGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGACT...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAGGGGGCCTCCAGGCCTaGCTACGCCGACCGGCACCT +
Preference number: 4 (lower is better)
Translates to: VLQPSFFGLQGCAKMTATGGLQA*LRRPAP
Trigger: AGGTGCCGGTCGGCGTAGCCAGGCCTGGAGGCCCCC...TGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CAGCGTTGTAAACCCAGGCCGGGATGTCCTGAGCGTTCTGGCAGAGGCCCGTGCTACCTCAAGCTGAGCTaGGCTTGTAGGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRCKPRPGCPERSGRGPCYLKLS*ACRLGR
Trigger: CCTCCCCAACCTACAAGCCCAGCTCAGCTTGAGGTA...GCACGGGCCTCTGCCAGAACGCTCAGGACATCCCGGCCTGGGTTTACAACGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp GGAACAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCCAGGCGGGTGCGGCAGCTaGTGGAGCACAGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: GTESRKSCQAVLLQKPVPGGCGS*WSTDSS
Trigger: GGACGAGTCTGTGCTCCATCAGCTGCCGCACCCGCC...TGGAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR TCA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGGCGGGTGCGGCAGCTaGTGGAGCACAGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPEGGCGS*WSTDSS
Trigger: GGACGAGTCTGTGCTCCATCAGCTGCCGCACCCGCC...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp GTCAGGAAGCGGGTTGGCGGGCACCGCGGGACACTCAGACTGGCAAACACCCTCCACAGGGTTTTTGCGTaGTACCCGGTAGGCCTTATT +
Preference number: 4 (lower is better)
Translates to: VRKRVGGHRGTLRLANTLHRVFA*YPVGLI
Trigger: AATAAGGCCTACCGGGTATCACGCAAAAACCCTGTG...GAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp CAGCACCTGTGGTTCGTTGGCGGGGCTCGTGGGATTGGGGTAAGGGCTGTGGTTTCCATGTCTTACACCTaGAACCCTCCCACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QHLWFVGGARGIGVRAVVSMSYT*NPPTSL
Trigger: CAGGCTGGTGGGAGGGTTTCAGGTGTAAGACATGGA...AACCACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACGAACCACAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp GTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCGCCAATGCCTCCTTCTaGCTGGGGCTCAGATCGCCG +
Preference number: 4 (lower is better)
Translates to: VYRTDRSYHDGQPAPGDSANASF*LGLRSP
Trigger: CGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGC...GGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCCAGTCCCTCTGCCGCTCATCGTaGCTCAACCGCGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: QRAGSLVRLSYFRSPFQSLCRSS*LNRGDG
Trigger: CCCATCCCCGCGGTTGAGCCACGATGAGCGGCAGAG...GGACTGGAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CCA 90 bp GTCAGGAAGCGGGTTGGCGGGCACCGCGGGACACTCAGACTGGCAAACACCCTCTATGTCGTACCAGACTaGGCAGCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: VRKRVGGHRGTLRLANTLYVVPD*AAIQVI
Trigger: TATGACCTGGATGGCTGCCCAGTCTGGTACGACATA...GAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp AAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCGGCGCTTTGTTTGCATaGAGAACAGCGGGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: KGVPARSGAAFPCSLKPSGALFA*RTAGGY
Trigger: GTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCC...GCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TGCACGCGTTGCATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTGCTCTTTCGAGGCCGTCTGTaGCCGCCCCCAGCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: CTRCMPPTEMGLLSKTLLFRGRL*PPPAPS
Trigger: ACTAGGGGCTGGGGGCGGCCACAGACGGCCTCGAAA...GAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAACGTTGGCGGGGCTCGTaGGATTGGGGTAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCERWRGS*DWGKGC
Trigger: ACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACG...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCTTCGTTCCCGCCAGGTCTaGGGCCGCCTTCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LQDRQILSRWPASSWGLLRSRQV*GRLPMF
Trigger: GAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACG...AAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp AAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCCGTTCCCGCCAGGTCTaGGGCCGCCTTCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: KAPEVCPPAQFLWASGLCRSRQV*GRLPMF
Trigger: GAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACG...GCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 72 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTaGCATGGAGAACAGCGGGTGGGTACCCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LRSLWVISLALC*HGEQRVGTRSP
Trigger: GGGACTTCGGGTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 72 bp GCAGCTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTaGTTTGCATGGAGAACAGCGGGTGGGTACCCGAAG +
Preference number: 4 (lower is better)
Translates to: AAAIPVGHFPGA*FAWRTAGGYPK
Trigger: CTTCGGGTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 72 bp GCTGGACCAATCAGAAGGCAAGCTGGGCGTGGCCCCTaGGGAAAGCTCACGCTAGAGAGCCGAGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: AGPIRRQAGRGP*GKLTLESRGGF
Trigger: AAATCCTCCTCGGCTCTCTAGCGTGAGCTTTCCCAAGGGGCCACGCCCAGCTTGCCTTCTGATTGGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp GGCACCGCGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGGCCACACATACCCCCTaGCAGATACTGTTGGATCAC +
Preference number: 4 (lower is better)
Translates to: GTAGHSDWQTPSPSAALLATHTP*QILLDH
Trigger: GTGATCCAACAGTATCTGTCAGGGGGTATGTGTGGC...CAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp GTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAACGCCGACCGGCACCTaGACTCCCTGCACGCGTTGC +
Preference number: 4 (lower is better)
Translates to: VLQPSFFGLQGCAKMTATTPTGT*TPCTRC
Trigger: GCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCGT...TGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACCAGGCCGGGATGTCCTaGGCGTTCTGGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CPPAQFLWASGLCENDCYQAGMS*AFWQRP
Trigger: GGGCCTCTGCCAGAACGCTCAGGACATCCCGGCCTG...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp AGGGAAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCGCATCCTTAGTGCCCTaGTCAAAGATGGCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RERRSRQVWGRLPMFSKAASLVP*SKMAED
Trigger: GTCTTCCGCCATCTTTGATCAGGGCACTAAGGATGC...GGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp GGGAACAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCCGCCAATGCCTCCTTCTaGCTGGGGCTCAGATCGCCG +
Preference number: 4 (lower is better)
Translates to: GNREQEVLSGCPTSEARSANASF*LGLRSP
Trigger: CGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGC...GGAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR GCA 90 bp GTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCGCAGGCTTCCAGAGATaGTTGAGGCCAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: VYRTDRSYHDGQPAPGDSAGFQR*LRPSPS
Trigger: CGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCCTGC...GGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACCCACCCTGTGGTACATaGCCCCCGCCACCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CPPAQFLWASGLCENDCYPPCGT*PPPPPA
Trigger: AGCTGGGGGTGGCGGGGGGCATGTACCACAGGGTGG...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GGCACCGCGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGAACACCCTCTCCGAGTaGTGCTCTCTTGATCCCACT +
Preference number: 4 (lower is better)
Translates to: GTAGHSDWQTPSPSAALLNTLSE*CSLDPT
Trigger: AGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTT...CAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGCCTGCACGCGTTGCATaGCTCCCACAGAGATGGGAC +
Preference number: 4 (lower is better)
Translates to: LRSLWVISLALCLHGEQRPARVA*LPQRWD
Trigger: GTCCCATCTCTGTGGGAGGCATGCAACGCGTGCAGG...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GGAACAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCCACTCTGCCGCTCATCGTaGCTCAACCGCGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GTESRKSCQAVLLQKPVPLCRSS*LNRGDG
Trigger: CCCATCCCCGCGGTTGAGCCACGATGAGCGGCAGAG...TGGAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CCA 90 bp GTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCATGCCTCCTTCTGCCTaGGGCTCAGATCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: VYRTDRSYHDGQPAPGDSMPPSA*GSDRRL
Trigger: GAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCAT...GGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp AAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCCATTCTCCCGAAACTTaGCCAATGCCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: KGVPARSGAAFPCSLKPSHSPET*PMPPSA
Trigger: GGCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATG...GCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp AAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCAGCATCTCATACTCCACTTaGTGGGAGGAGCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: KGVPARSGAAFPCSLKPSISYST*WEEPRE
Trigger: TTCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGAT...GCTGGGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CAGCACCTGTGGTTCGTTGGCGGGGCTCGTGGGATTGGGGTAAGGGCTGTGGTTTCTTCAGGGACCAGGTaGGAGTTGTACCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QHLWFVGGARGIGVRAVVSSGTR*ELYLWL
Trigger: CAACCAGAGGTACAACTCCCACCTGGTCCCTGAAGA...AACCACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACGAACCACAGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CGCCTTCCCATGTTCTCTAAAGCCCAGCACCTGTGGTTCGTTGGCGGGGCTCGTTCGAAGCTTCTGGCTTaGCCAATGCCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RLPMFSKAQHLWFVGGARSKLLA*PMPPSA
Trigger: GGCAGAAGGAGGCATTGGCCAAGCCAGAAGCTTCGA...ACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTTAGAGAACATGGGAAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617837.4
CDS-3UTR CCA 90 bp CCTGAAACCCTCCCACCAGCCTGGGAGCCCGTTTTACAGGTGAGAAAATGGAGGAAAGCCCAGCACCTGTaGTTCGTTGGCGGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: PETLPPAWEPVLQVRKWRKAQHL*FVGGAR
Trigger: ACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTT...CCTCCATTTTCTCACCTGTAAAACGGGCTCCCAGGCTGGTGGGAGGGTTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGAAAGCCCAGCACCTGTaGTTCGTTGGCGGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: LRSLWVISLALCLHGEQRKAQHL*FVGGAR
Trigger: ACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTT...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp GCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATGTCCTGTTTGGAGGCTaGGAACAGCAGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ALCGLVGTLLQKQLTLPHVLFGG*EQQTLG
Trigger: GCCAAGGGTCTGCTGTTCTCAGCCTCCAAACAGGAC...ATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR TCA 90 bp CAGCACCTGTGGTTCGTTGGCGGGGCTCGTGGGATTGGGGTAAGGGCTGTGGTTAACATCCGCTCCATCTaGCATAAACTGCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: QHLWFVGGARGIGVRAVVNIRSI*HKLPPE
Trigger: CTCAGGTGGCAGTTTATGTCAGATGGAGCGGATGTT...AACCACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACGAACCACAGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TACAACAGGAGGAAGCCTTCCCCCGCTGGACCTCAGTTCACCCAGGTGAGCAATCAGGATCACTGCAGGTaGGGGTCCCATCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YNRRKPSPAGPQFTQVSNQDHCR*GSHLQG
Trigger: TCCCTGAAGATGGGACCCTCACCTGCAGTGATCCTG...ATTGCTCACCTGGGTGAACTGAGGTCCAGCGGGGGAAGGCTTCCTCCTGTTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp GGTGAGAGGCCGGTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCCTCAGCTTCGCAAGATaGGCTTCCCAGACGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GERPVALKRALDDLLLAFLSFAR*ASQTGP
Trigger: CGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAG...GAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTACCGGCCTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGCAGGCCGGGATGTCCTaGGCGTTCTGGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CLTEMKAPEVCPPAQFLWQAGMS*AFWQRP
Trigger: GGGCCTCTGCCAGAACGCTCAGGACATCCCGGCCTG...CCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CCCAGCCAGTTCTGTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATATCGCCAATGCCTCCTTCTaGCTGGGGCTCAGATCGCCG +
Preference number: 4 (lower is better)
Translates to: PSQFCLCDLWEGASPRNIANASF*LGLRSP
Trigger: CGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGC...GATATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGACAGAACTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGCCCTGGCGCTTTGTTTaGATGGAGAACAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRSLWVISLALCLHGEQRPWRFV*MENSGW
Trigger: CCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGG...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp AAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGGCCCTCCCTGCAGCTaGGATCCCTGTGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: KAPEVCPPAQFLWASGLCGPPCS*DPCGSF
Trigger: AAATGACCCACAGGGATCGCAGCTGCAGGGAGGGCC...GCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CAGCGTTGTAAACCCAGGCCGGGATGTCCTGAGCGTTCTGGCAGAGGCCCGTGCTGCTTAGTAAGACCTTaGTCAGGTCAGTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QRCKPRPGCPERSGRGPCCLVRP*SGQSGS
Trigger: GCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCA...GCACGGGCCTCTGCCAGAACGCTCAGGACATCCCGGCCTGGGTTTACAACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAACTCCCTGCACGCGTTaGATGCCTCCCACAGAGATG +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCETPCTR*MPPTEM
Trigger: CATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGT...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTCTCTGCCGCTCATCGTaGCTCAACCGCGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: QPSFFGLQGCAKMTATRGLCRSS*LNRGDG
Trigger: CCCATCCCCGCGGTTGAGCCACGATGAGCGGCAGAG...ACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCTTATGCCTCCTTCTGCCTaGGGCTCAGATCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: LQDRQILSRWPASSWGLLMPPSA*GSDRRL
Trigger: GAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCAT...AAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CGCCTTCCCATGTTCTCTAAAGCCCAGCACCTGTGGTTCGTTGGCGGGGCTCGTATCTCATACTCCACTTaGTGGGAGGAGCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: RLPMFSKAQHLWFVGGARISYST*WEEPRE
Trigger: TTCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGAT...ACGAGCCCCGCCAACGAACCACAGGTGCTGGGCTTTAGAGAACATGGGAAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGCAGCTGCGATCCCTGTaGGTCATTTCCCTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: LRSLWVISLALCLHGEQRQLRSL*VISLAL
Trigger: AAGCGCCAGGGAAATGACCCACAGGGATCGCAGCTG...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp AGGGAAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCTGCCTCCCACAGAGATaGGACTGCTTAGTAAGACCT +
Preference number: 4 (lower is better)
Translates to: RERRSRQVWGRLPMFSKACLPQR*DCLVRP
Trigger: AGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCA...GGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTTTTCGAGGCCGTCTGTaGCCGCCCCCAGCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPFRGRL*PPPAPS
Trigger: ACTAGGGGCTGGGGGCGGCCACAGACGGCCTCGAAA...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TGCACGCGTTGCATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTGCTCCGGGGCTCGTGGGATTaGGGTAAGGGCTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CTRCMPPTEMGLLSKTLLRGSWD*GKGCGF
Trigger: GAAACCACAGCCCTTACCCCAATCCCACGAGCCCCG...GAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGATCCCACTTAGCATTTTTGCCCGGACTCACACTTaGCTCGCACGGGCTACGCGG +
Preference number: 4 (lower is better)
Translates to: DWQTPSPSAALLIPLSIFARTHT*LARATR
Trigger: CCGCGTAGCCCGTGCGAGCCAAGTGTGAGTCCGGGC...AAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CAA 72 bp CGATGGCCAGCCAGCTCCTGGGGACTCCTTAGGTATTaGATAGACACGGAGACCCACTGCAGTCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RWPASSWGLLRY*IDTETHCSRSS
Trigger: GGAAGAGCGACTGCAGTGGGTCTCCGTGTCTATCAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 72 bp TTAGTAAGACCTTGCTCAGGTCAGTCAGGAAGCGGGTaGGCGGGCACCGCGGGACACTCAGACTGGCAAACA +
Preference number: 4 (lower is better)
Translates to: LVRPCSGQSGSG*AGTAGHSDWQT
Trigger: TGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGACTGACCTGAGCAAGGTCTTACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 72 bp ATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTaGCTCAGGTCAGTCAGGAAGCGGGTTGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: MPPTEMGLLSKT*LRSVRKRVGGH
Trigger: GTGCCCGCCAACCCGCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTGAAACTCAGGGCGGGTGCGGCAGCTaGTGGAGCACAGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: LLIVCVHSLVSWEMSETQGGCGS*WSTDSS
Trigger: GGACGAGTCTGTGCTCCATCAGCTGCCGCACCCGCC...CTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp CCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGGCTTCCAGAGATGCTTaGGGCCAAGCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: PAQFLWASGLCENDCYKGASRDA*GQAPRS
Trigger: ACTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGC...CCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp AGGGAACAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCGCTTCCAGAGATGCTTaGGGCCAAGCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: REQRAGSLVRLSYFRSPFASRDA*GQAPRS
Trigger: ACTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGC...GAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR TCA 90 bp AGGCCGGTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCGCTTCCAGAGATGCTTaGGGCCAAGCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: RPVALKRALDDLLLAFTPASRDA*GQAPRS
Trigger: ACTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGC...GGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTACCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp GGCACCGCGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGCGAGTGCTGCTCTCTTaGTCCCACTTAGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: GTAGHSDWQTPSPSAALLRVLLS*SHLAFL
Trigger: CAAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCG...CAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACGCCTGGCCTTTGCCCTaGGCTCCCTCAGCTTCGCAA +
Preference number: 4 (lower is better)
Translates to: CPPAQFLWASGLCENDCYAWPLP*APSASQ
Trigger: TTGCGAAGCTGAGGGAGCTCAGGGCAAAGGCCAGGC...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CTGGACTCTGGAGTCCCTTCTCAGCAGTCGCCATGTATAACTAGGAAGCACTCGCCCTATCTATTGGCGTaGAACGGCTGCTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LDSGVPSQQSPCITRKHSPYLLA*NGCWVR
Trigger: CCGGACCCAGCAGCCGTTTCACGCCAATAGATAGGG...CGAGTGCTTCCTAGTTATACATGGCGACTGCTGAGAAGGGACTCCAGAGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp TTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGTCAGATCGCCGACTCTaGCGCTCATCGTGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: FVVWWAHSCRSSSHSRILSDRRL*RSSWLN
Trigger: GTTGAGCCACGATGAGCGGCAGAGTCGGCGATCTGA...CAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR GCA 90 bp GTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAGCCAATGCCTCCTTCTaGCTGGGGCTCAGATCGCCG +
Preference number: 4 (lower is better)
Translates to: VLQPSFFGLQGCAKMTATANASF*LGLRSP
Trigger: CGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGC...TGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAATGGCCTCCGACTTCTaGAGGTCGAAGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCEMASDF*RSKLLA
Trigger: AGCCAGAAGCTTCGACCTGCAGAAGTCGGAGGCCAT...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CCCAGCCAGTTCTGTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATATCGCAGGCTTCCAGAGATaGTTGAGGCCAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PSQFCLCDLWEGASPRNIAGFQR*LRPSPS
Trigger: CGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCCTGC...GATATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGACAGAACTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp GGCCAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCGCAGGCTTCCAGAGATaGTTGAGGCCAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GQMIALCGLVGTLLQKQLAGFQR*LRPSPS
Trigger: CGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCCTGC...GAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR GCA 90 bp GGAGGATTTCTGCGCATGCGCCCTATCTATTGGCGTGAAACGGCTGCTGGGTCCGCCGAGGAGGATTTCTaGGCATGCGCCCTATCTATT +
Preference number: 4 (lower is better)
Translates to: GGFLRMRPIYWRETAAGSAEEDF*ACALSI
Trigger: AATAGATAGGGCGCATGCGCAGAAATCCTCCTCGGC...GGACCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCATGCGCAGAAATCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp CCAGGCCAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGATGCCTCCTTCTGCCTaGGGCTCAGATCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: PGQMIALCGLVGTLLQKQMPPSA*GSDRRL
Trigger: GAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCAT...CTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CCA 90 bp AGGGAAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCAGAACAGCAGACCCTTaGCATCCAGAGGTCCAATTA +
Preference number: 4 (lower is better)
Translates to: RERRSRQVWGRLPMFSKARTADP*HPEVQL
Trigger: TAATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCT...GGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAATGGCCAGCCAGCTCCTaGGGACTCCTTAGGTATTTG +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCEWPASS*GLLRYL
Trigger: CAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCA...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGTGGCCAGCCAGCTCCTaGGGACTCCTTAGGTATTTG +
Preference number: 4 (lower is better)
Translates to: LRSLWVISLALCLHGEQRWPASS*GLLRYL
Trigger: CAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCA...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GGTGAGAGGCCGGTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCCGGGGCTCGTGGGATTaGGGTAAGGGCTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GERPVALKRALDDLLLAFRGSWD*GKGCGF
Trigger: GAAACCACAGCCCTTACCCCAATCCCACGAGCCCCG...GAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTACCGGCCTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTGCACCTGTGGTTCGTTaGCGGGGCTCGTGGGATTGG +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPAPVVR*RGSWDW
Trigger: CCAATCCCACGAGCCCCGCCAACGAACCACAGGTGC...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TCTCGGGGTTGCTCACATGGAGGACTGCTTGGTGAGAGGCCGGTAGCACTGAAAAATCAGAAGGCAAGCTaGGCGTGGCCCCTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SRGCSHGGLLGERPVALKNQKAS*AWPLGK
Trigger: TTTCCCAAGGGGCCACGCCCAGCTTGCCTTCTGATT...TTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp CCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGCAGGATCACTGCAGGTaGGGGTCCCATCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PAQFLWASGLCENDCYKGQDHCR*GSHLQG
Trigger: TCCCTGAAGATGGGACCCTCACCTGCAGTGATCCTG...CCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGGCCAGTCCAGGCCAAATaGTTGCACTTTGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LWSGGHTLAEAAHTPASWPVQAK*LHFVVW
Trigger: CCAGACCACAAAGTGCAATCATTTGGCCTGGACTGG...CCAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR TCA 90 bp AGGCCGGTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCTGGGAAGATGTGTGCTaGCTCAGGCCACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RPVALKRALDDLLLAFTPWEDVC*LRPPPE
Trigger: CTCAGGAGGTGGCCTGAGTCAGCACACATCTTCCCA...GGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTACCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTGCCTGGCCTTTGCCCTaGGCTCCCTCAGCTTCGCAA +
Preference number: 4 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLAWPLP*APSASQ
Trigger: TTGCGAAGCTGAGGGAGCTCAGGGCAAAGGCCAGGC...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp GTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCACCCCCTTTGGGCCTCTTGAGTaGGAGGCAGCGAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: VALKRALDDLLLAFTPTPFGPLE*EAARSL
Trigger: TAGGCTCCTCGCTGCCTCTCACTCAAGAGGCCCAAA...GGGGGTGGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp GTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCAAAATGAGTAACTATTaGGGCCCCCGCTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VYRTDRSYHDGQPAPGDSKMSNY*GPRWLP
Trigger: AGGGAGCCAGCGGGGGCCTCAATAGTTACTCATTTT...GGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp TACAACAGGAGGAAGCCTTCCCCCGCTGGACCTCAGTTCACCCAGGTGAGCAATAGTATGTCCCCAGACTaGGCTTCTTGGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: YNRRKPSPAGPQFTQVSNSMSPD*ASWGQD
Trigger: ATCCTGTCCCCAAGAAGCTCAGTCTGGGGACATACT...ATTGCTCACCTGGGTGAACTGAGGTCCAGCGGGGGAAGGCTTCCTCCTGTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp CAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACAGCCAATGCCTCCTTCTaGCTGGGGCTCAGATCGCCG +
Preference number: 4 (lower is better)
Translates to: QMIALCGLVGTLLQKQLTANASF*LGLRSP
Trigger: CGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGC...TGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR GCA 90 bp CCCCTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTCCCCAACTGCAGCCGAAACTTGGCCAATaGCTCCTTCTGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLAVINYGDGLHLPPQLQPKLGQ*LLLPGA
Trigger: AGCCCCAGGCAGAAGGAGGCATTGGCCAAGTTTCGG...CTGCAGTTGGGGAGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437022.5
CDS-3UTR GCA 90 bp TTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGATGGCCTCCGACTTCTaGAGGTCGAAGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FVVWWAHSCRSSSHSRILMASDF*RSKLLA
Trigger: AGCCAGAAGCTTCGACCTGCAGAAGTCGGAGGCCAT...CAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR GCA 90 bp AGCAGACCCTTGGCATCCAGAGGTCCAATTATGTCGTACCAGACTGGGCAGCCAATGGCCTCCGACTTCTaGAGGTCGAAGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SRPLASRGPIMSYQTGQPMASDF*RSKLLA
Trigger: AGCCAGAAGCTTCGACCTGCAGAAGTCGGAGGCCAT...TGGCTGCCCAGTCTGGTACGACATAATTGGACCTCTGGATGCCAAGGGTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR GCA 90 bp GAAGTTGGCACAGTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTGCAGGCTTCCAGAGATaGTTGAGGCCAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: EVGTVYRTDRSYHDGQPAAGFQR*LRPSPS
Trigger: CGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCCTGC...AGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACTGTGCCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGGTGTGGCCCAGGAGTTaGCAAAGTCTCAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRSLWVISLALCLHGEQRVWPRS*QSLKVR
Trigger: CCTCACTTTGAGACTTTGGCAACTCCTGGGCCACAC...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGCCCTGGCGCTTTGTTTaGATGGAGAACAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAQFLWASGLCENDCYKGPWRFV*MENSGW
Trigger: CCACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGG...CCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GGAATTATTAGACAGTCCCTAAAACCACGTGATCGCTGCTCCTCCGCCTCCCTCAAACCACGTGATCGCTaGTCCTCCGCCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GIIRQSLKPRDRCSSASLKPRDR*SSASLS
Trigger: TGAGAGGGAGGCGGAGGAGCAGCGATCACGTGGTTT...GAGGGAGGCGGAGGAGCAGCGATCACGTGGTTTTAGGGACTGTCTAATAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp GGCACCGCGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGCTGAAACACCGGCAATaGTGGCGTGGAATTATTAGA +
Preference number: 4 (lower is better)
Translates to: GTAGHSDWQTPSPSAALLLKHRQ*WRGIIR
Trigger: TCTAATAATTCCACGCCAGCATTGCCGGTGTTTCAG...CAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp GACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGATCCCACTTAGCATTTTTCCCCTGGGAGGTAGGTaGCTGGACTCTGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: DWQTPSPSAALLIPLSIFPLGGR*LDSGVP
Trigger: AGGGACTCCAGAGTCCAGGCACCTACCTCCCAGGGG...AAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp CTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTGAAACTCAGCTCTGCCGCTCATCGTaGCTCAACCGCGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LLIVCVHSLVSWEMSETQLCRSS*LNRGDG
Trigger: CCCATCCCCGCGGTTGAGCCACGATGAGCGGCAGAG...CTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTATGCCTCCTTCTGCCTaGGGCTCAGATCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPMPPSA*GSDRRL
Trigger: GAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCAT...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGGGAGAAAATAGTCATCTaGATTCGGCAGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LWSGGHTLAEAAHTPASWEKIVI*IRQGRQ
Trigger: CTGCCGGCCCTGCCGAATCCAGATGACTATTTTCTC...CCAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437022.5
CDS-3UTR CCA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGTCCTCCCCAACTTTGTaGTCTGGTGGGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: LRSLWVISLALCLHGEQRSSPTL*SGGHTL
Trigger: AAGAGTGTGCCCACCAGACCACAAAGTTGGGGAGGA...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAATCTTCAGGGACCAGGTaGGAGTTGTACCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCESSGTR*ELYLWL
Trigger: CAACCAGAGGTACAACTCCCACCTGGTCCCTGAAGA...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TCTCGGGGTTGCTCACATGGAGGACTGCTTGGTGAGAGGCCGGTAGCACTGAAATCTTCAGGGACCAGGTaGGAGTTGTACCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SRGCSHGGLLGERPVALKSSGTR*ELYLWL
Trigger: CAACCAGAGGTACAACTCCCACCTGGTCCCTGAAGA...TTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCCACTTTGTGGTCTGGTaGGCACACTCTTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: HFVVWWAHSCRSSSHSRIHFVVW*AHSCRS
Trigger: GCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTG...GATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CCA 90 bp TTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGTCGAAGCTTCTGGCTTaGCCAATGCCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FVVWWAHSCRSSSHSRILSKLLA*PMPPSA
Trigger: GGCAGAAGGAGGCATTGGCCAAGCCAGAAGCTTCGA...CAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR CCA 90 bp GCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCCTGTTTGGAGGCTCTaGAGGCTGCCAGCTAATGAT +
Preference number: 4 (lower is better)
Translates to: ALCGLVGTLLQKQLTLPHPVWRL*RLPAND
Trigger: ATCATTAGCTGGCAGCCTCCAGAGCCTCCAAACAGG...ATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437022.5
CDS-3UTR CCA 90 bp CCAGGCCAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGTCAGCAGGTCCTGTTTaGAGGCTCTGGAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PGQMIALCGLVGTLLQKQSAGPV*RLWRLP
Trigger: TGGCAGCCTCCAGAGCCTCCAAACAGGACCTGCTGA...CTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437022.5
CDS-3UTR CCA 90 bp AGGCCGGTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCCAGATCCTATCACGATaGCCAGCCAGCTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RPVALKRALDDLLLAFTPQILSR*PASSWG
Trigger: TCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTG...GGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTACCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGCGGGACACTCAGACTaGCAAACACCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPEAGHSD*QTPSPS
Trigger: ACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGC...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTAGACGTTGGCGGGGCTCGTaGGATTGGGGTAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PSFFGLQGCAKMTATRGRRWRGS*DWGKGC
Trigger: ACAGCCCTTACCCCAATCCCACGAGCCCCGCCAACG...TCTACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TCACGATGGCCAGCCAGCTCCTGGGGACTCCTTAGGTATTTGATAGACACGGAGATGCGCCCTATCTATTaGCGTGAAACGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRWPASSWGLLRYLIDTEMRPIY*RETAAG
Trigger: CCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCAT...CTCCGTGTCTATCAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp CCACCCAGCCAGTTCTGTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATGCCACACATACCCCCTaGCAGATACTGTTGGATCAC +
Preference number: 4 (lower is better)
Translates to: PPSQFCLCDLWEGASPRNATHTP*QILLDH
Trigger: GTGATCCAACAGTATCTGTCAGGGGGTATGTGTGGC...ATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGACAGAACTGGCTGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp TCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGACGCTTCCAGAGATGCTTaGGGCCAAGCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SGKEHPQEISVQSQTQLDASRDA*GQAPRS
Trigger: ACTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGC...GTCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp TCAGGGGTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTGATCCCATGCCCCCAGTTCTGTCTCTGTaGCCTCTGGGAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: SGVKAALLSICLPCDPMPPVLSL*PLGRSI
Trigger: GATGCTCCTTCCCAGAGGTCACAGAGACAGAACTGG...GGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTTGGAGGACTGCTTGGTaGGAGGCCGGTAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPWRTAW*EAGSTE
Trigger: TTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCA...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACTGGAGGACTGCTTGGTaGGAGGCCGGTAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: CPPAQFLWASGLCENDCYWRTAW*EAGSTE
Trigger: TTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCA...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTTCAGATCGCCGACTCTaGCGCTCATCGTGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: PLQSLFLCLTEMKAPEVCSDRRL*RSSWLN
Trigger: GTTGAGCCACGATGAGCGGCAGAGTCGGCGATCTGA...ACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTTGAGGCCAAGCCCCTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTTCAGATCGCCGACTCTaGCGCTCATCGTGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: LEAKPLAVINYGDGLHLPSDRRL*RSSWLN
Trigger: GTTGAGCCACGATGAGCGGCAGAGTCGGCGATCTGA...AGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAGGGGCTTGGCCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR GCA 90 bp CCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCGAAACTTGGCCAATaGCTCCTTCTGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLQSLFLCLTEMKAPEVCPKLGQ*LLLPGA
Trigger: AGCCCCAGGCAGAAGGAGGCATTGGCCAAGTTTCGG...ACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402592.7
ENST00000615189.5
CDS-3UTR GCA 90 bp TGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGGTCCTCAGCATCACCTCTGGAGGCTaGCAGCTAATGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: WWAHSCRSSSHSRILVLSITSGG*QLMMLS
Trigger: TGACAACATCATTAGCTGGCAGCCTCCAGAGGTGAT...GCTGAGGACCAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR GCA 90 bp TCAGGGGTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTGATCCCATGCCCTGGTGGGCACACTCTTaGAGAAGCAGCTCACACTCC +
Preference number: 4 (lower is better)
Translates to: SGVKAALLSICLPCDPMPWWAHS*RSSSHS
Trigger: GGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCA...GGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCACCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp CCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTAGAGCAGGCTTCCAGAGATaGTTGAGGCCAAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PSFFGLQGCAKMTATRGRAGFQR*LRPSPS
Trigger: CGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCCTGC...TCTACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAATTATTTCGGGGTGCCTaGCCCCAGCTGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCELFRGA*PQLFHL
Trigger: AAGATGAAACAGCTGGGGGCAGGCACCCCGAAATAA...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGGGTGTTATTTCGGGGTaGCTGCCCCCAGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: EMKAPEVCPPAQFLWASGGVISG*LPPAVS
Trigger: TGAAACAGCTGGGGGCAGGCACCCCGAAATAACACC...CCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAGCAACCAGCTACCCTaGTACTCCTCATTGCGATCT +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCESNQLP*YSSLRS
Trigger: AGATCGCAATGAGGAGTAGCAGGGTAGCTGGTTGCT...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGGTCAGAACAGCAGACCCTTaGCATCCAGAGGTCCAATTA +
Preference number: 4 (lower is better)
Translates to: VVWWAHSCRSSSHSRILVRTADP*HPEVQL
Trigger: TAATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCT...GACCAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR CCA 90 bp TCTCGGGGTTGCTCACATGGAGGACTGCTTGGTGAGAGGCCGGTAGCACTGAAAAACTTTGTGGTCTGGTaGGCACACTCTTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRGCSHGGLLGERPVALKNFVVW*AHSCRS
Trigger: GCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTT...TTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp AAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCCCAGCCCAGTTTCTTTaGGCTTCAGGGTTGTGCGAA +
Preference number: 4 (lower is better)
Translates to: KAPEVCPPAQFLWASGLCPAQFL*ASGLCE
Trigger: TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG...GCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GAAGTTGGCACAGTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCAGATCCTATCACGATaGCCAGCCAGCTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EVGTVYRTDRSYHDGQPAQILSR*PASSWG
Trigger: TCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTG...AGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACTGTGCCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTATGGAGAACAGCGGGTaGGTACCCGAAGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QPSFFGLQGCAKMTATRGMENSG*VPEVPG
Trigger: TCCTGGGACTTCGGGTACCCACCCGCTGTTCTCCAT...ACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GGAATTATTAGACAGTCCCTAAAACCACGTGATCGCTGCTCCTCCGCCTCCCTCGGCGCTTTGTTTGCATaGAGAACAGCGGGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GIIRQSLKPRDRCSSASLGALFA*RTAGGY
Trigger: GTACCCACCCGCTGTTCTCCATGCAAACAAAGCGCC...GAGGGAGGCGGAGGAGCAGCGATCACGTGGTTTTAGGGACTGTCTAATAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp AGGGAACAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCGCCACACATACCCCCTaGCAGATACTGTTGGATCAC +
Preference number: 4 (lower is better)
Translates to: REQRAGSLVRLSYFRSPFATHTP*QILLDH
Trigger: GTGATCCAACAGTATCTGTCAGGGGGTATGTGTGGC...GAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTGTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR TCA 90 bp CCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTAGAGTCCTGTTTGGAGGCTaGGAACAGCAGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PSFFGLQGCAKMTATRGRVLFGG*EQQTLG
Trigger: GCCAAGGGTCTGCTGTTCTCAGCCTCCAAACAGGAC...TCTACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CGAGCTCTAAATGAGGCTAGAGGAGTGAACGGTGAGCCCCTGGGAGGTAGGTGCAGTCATAAATTATGGTaGTGGTCTCCACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RALNEARGVNGEPLGGRCSHKLW*WSPPSS
Trigger: GGAGGAAGGTGGAGACCATCACCATAATTTATGACT...GCACCTACCTCCCAGGGGCTCACCGTTCACTCCTCTAGCCTCATTTAGAGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAGCACCTGGTCAGGGCTaGTATGTTTCAGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCEAPGQG*YVSVKP
Trigger: AGGTTTTACTGAAACATATCAGCCCTGACCAGGTGC...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp AAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCAACATCCGCTCCATCTaGCATAAACTGCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: KAPEVCPPAQFLWASGLCNIRSI*HKLPPE
Trigger: CTCAGGTGGCAGTTTATGTCAGATGGAGCGGATGTT...GCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGACCTCAGGATCACTGCAGGTaGGGGTCCCATCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: WEGASPRNICPVTDPVRPQDHCR*GSHLQG
Trigger: TCCCTGAAGATGGGACCCTCACCTGCAGTGATCCTG...AGGTCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp TGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGCAGGATCACTGCAGGTaGGGGTCCCATCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CLTEMKAPEVCPPAQFLWQDHCR*GSHLQG
Trigger: TCCCTGAAGATGGGACCCTCACCTGCAGTGATCCTG...CCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp GGAACAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCCACCAGTCCAGGCCAAATaGTTGCACTTTGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GTESRKSCQAVLLQKPVPPVQAK*LHFVVW
Trigger: CCAGACCACAAAGTGCAATCATTTGGCCTGGACTGG...TGGAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR TCA 90 bp CTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCAAGACGCCGACCGGCACCTaGACTCCCTGCACGCGTTGC +
Preference number: 4 (lower is better)
Translates to: LPCYSSLRSKLMCSFRSKTPTGT*TPCTRC
Trigger: GCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCGT...CTTGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp AGGCCAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTTGGTGGGCACACTCTTaGAGAAGCAGCTCACACTCC +
Preference number: 4 (lower is better)
Translates to: RPNDCTLWSGGHTLAEAAWWAHS*RSSSHS
Trigger: GGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCA...AGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR GCA 90 bp AGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTTGGTGGGCACACTCTTaGAGAAGCAGCTCACACTCC +
Preference number: 4 (lower is better)
Translates to: RSVLQPSFFGLQGCAKMTWWAHS*RSSSHS
Trigger: GGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCA...AGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTGATCCCATGCCCACCCAGGAGCCACGGGAAATCTaGACGCTGTGTTCATACTGC +
Preference number: 4 (lower is better)
Translates to: VKAALLSICLPCDPMPTQEPREI*TLCSYC
Trigger: GCAGTATGAACACAGCGTGCAGATTTCCCGTGGCTC...CTGGGTGGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp CCACCCAGCCAGTTCTGTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATCTCAGGGGTGAAGGCTaGACTTTTGAGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: PPSQFCLCDLWEGASPRNLRGEG*TFEHLL
Trigger: AAGCAGATGCTCAAAAGTGCAGCCTTCACCCCTGAG...ATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGACAGAACTGGCTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp TTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCTTTTATTTCGGGGTGCCTaGCCCCAGCTGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LQDRQILSRWPASSWGLLLFRGA*PQLFHL
Trigger: AAGATGAAACAGCTGGGGGCAGGCACCCCGAAATAA...AAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp AGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGGTGTTATTTCGGGGTaGCTGCCCCCAGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RSVLQPSFFGLQGCAKMTGVISG*LPPAVS
Trigger: TGAAACAGCTGGGGGCAGGCACCCCGAAATAACACC...AGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GGCCAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCGGAGGCTCTGGAGGCTaGCAGCTAATGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GQMIALCGLVGTLLQKQLGGSGG*QLMMLS
Trigger: TGACAACATCATTAGCTGGCAGCCTCCAGAGCCTCC...GAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437022.5
CDS-3UTR GCA 90 bp CTTTATTCATTGGTTAATTTTCCTAACAGCGTTGTAAACCCAGGCCGGGATGTCCCACCCTGTGGTACATaGCCCCCGCCACCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LYSLVNFPNSVVNPGRDVPPCGT*PPPPPA
Trigger: AGCTGGGGGTGGCGGGGGGCATGTACCACAGGGTGG...GACATCCCGGCCTGGGTTTACAACGCTGTTAGGAAAATTAACCAATGAATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCACCCCCGTGTGGCCCAGGAGTTaGCAAAGTCTCAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VALKRALDDLLLAFTPTPVWPRS*QSLKVR
Trigger: CCTCACTTTGAGACTTTGGCAACTCCTGGGCCACAC...GGGGGTGGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAATGCTTAGTAAGACCTTaGTCAGGTCAGTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: APEVCPPAQFLWASGLCECLVRP*SGQSGS
Trigger: GCTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCA...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTGGACTCTGGAGTCCCTTCTCAGCAGTCGCCATGTATAACTAGGAAGCACTCGGAGGATTTCTGCGCATaGGCCCTATCTATTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LDSGVPSQQSPCITRKHSEDFCA*ALSIGV
Trigger: CACGCCAATAGATAGGGCGCATGCGCAGAAATCCTC...CGAGTGCTTCCTAGTTATACATGGCGACTGCTGAGAAGGGACTCCAGAGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp CCCCTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTCCCCAACTGCAGCATTCTCCCGAAACTTaGCCAATGCCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PLAVINYGDGLHLPPQLQHSPET*PMPPSA
Trigger: GGCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATG...CTGCAGTTGGGGAGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437022.5
CDS-3UTR CCA 90 bp GGAATTATTAGACAGTCCCTAAAACCACGTGATCGCTGCTCCTCCGCCTCCCTCCCTGACAGATACTGTTaGATCACCTCTGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GIIRQSLKPRDRCSSASLPDRYC*ITSGGC
Trigger: GCAGCCTCCAGAGGTGATCCAACAGTATCTGTCAGG...GAGGGAGGCGGAGGAGCAGCGATCACGTGGTTTTAGGGACTGTCTAATAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp CCACCCAGCCAGTTCTGTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATGCACATAATACTTCCTaGGGATGTCACCCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: PPSQFCLCDLWEGASPRNAHNTS*GCHPRS
Trigger: ACTACGGGGGTGACATCCCCAGGAAGTATTATGTGC...ATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGACAGAACTGGCTGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTCATACTCCACTTGGTaGGAGGAGCCACGGGAAATC +
Preference number: 4 (lower is better)
Translates to: PAQFLWASGLCENDCYKGSYSTW*EEPREI
Trigger: GATTTCCCGTGGCTCCTCCCACCAAGTGGAGTATGA...CCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTGATCCCATGCCCACCCAGATCTCATACTCCACTTaGTGGGAGGAGCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: VKAALLSICLPCDPMPTQISYST*WEEPRE
Trigger: TTCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGAT...CTGGGTGGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp TTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCTTGTTGCACTTTGTGGTCTaGTGGGCACACTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: FVVWWAHSCRSSSHSRILLHFVV*WAHSCR
Trigger: TCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAA...CAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CCA 90 bp CAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCCAGTCCTTGCACTTTGTGGTCTaGTGGGCACACTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: QRAGSLVRLSYFRSPFQSLHFVV*WAHSCR
Trigger: TCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAA...GGACTGGAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCAGCTTCGCTGTCCCTaGACAGGTGAAGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPQLRCP*TGEVGT
Trigger: TGTGCCAACTTCACCTGTCCAGGGACAGCGAAGCTG...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp AGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTCAGCTTCGCTGTCCCTaGACAGGTGAAGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: RSVLQPSFFGLQGCAKMTQLRCP*TGEVGT
Trigger: TGTGCCAACTTCACCTGTCCAGGGACAGCGAAGCTG...AGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TTCTCCCCGGCAGCTGACTTCCCTGAAGTGTTAAGTCCCAATCTTTCACCCTTTGCGGGACACTCAGACTaGCAAACACCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: FSPAADFPEVLSPNLSPFAGHSD*QTPSPS
Trigger: ACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGC...AAAGGGTGAAAGATTGGGACTTAACACTTCAGGGAAGTCAGCTGCCGGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCTTTGCCTCCCACAGAGATaGGACTGCTTAGTAAGACCT +
Preference number: 4 (lower is better)
Translates to: LQDRQILSRWPASSWGLLCLPQR*DCLVRP
Trigger: AGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCA...AAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
3UTR CAA 72 bp TCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTaGATCCCACTTAGCATTTTTGTCTCGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SDWQTPSPSAAL*IPLSIFVSGLL
Trigger: GAGCAACCCCGAGACAAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTGCCACACATACCCCCTaGCAGATACTGTTGGATCAC +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPATHTP*QILLDH
Trigger: GTGATCCAACAGTATCTGTCAGGGGGTATGTGTGGC...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTGAAACTCAGGTCCTGTTTGGAGGCTaGGAACAGCAGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LLIVCVHSLVSWEMSETQVLFGG*EQQTLG
Trigger: GCCAAGGGTCTGCTGTTCTCAGCCTCCAAACAGGAC...CTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp CACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCAGTCATAAATTATGGTaGTGGTCTCCACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HFVVWWAHSCRSSSHSRISHKLW*WSPPSS
Trigger: GGAGGAAGGTGGAGACCATCACCATAATTTATGACT...GATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR TCA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGTTGCTCCCAGGACCATaGTCTTCTTACGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPELLPGP*SSYECP
Trigger: AGGACACTCGTAAGAAGATCATGGTCCTGGGAGCAA...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp AGGCCGGTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCTTGCTCCCAGGACCATaGTCTTCTTACGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RPVALKRALDDLLLAFTPLLPGP*SSYECP
Trigger: AGGACACTCGTAAGAAGATCATGGTCCTGGGAGCAA...GGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTACCGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TCAGGGGTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTGATCCCATGCCCAACATCCGCTCCATCTaGCATAAACTGCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SGVKAALLSICLPCDPMPNIRSI*HKLPPE
Trigger: CTCAGGTGGCAGTTTATGTCAGATGGAGCGGATGTT...GGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCACCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp TCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGACCGTGTTGAACCCCTGTaGTCGCCTAGGACTGTGACT +
Preference number: 4 (lower is better)
Translates to: SGKEHPQEISVQSQTQLDRVEPL*SPRTVT
Trigger: AGTCACAGTCCTAGGCGATCACAGGGGTTCAACACG...GTCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp GTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGTGGTCAGCTGGGAGATaGGTGAAACTCAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VSVTSGKEHPQEISVQSQWSAGR*VKLRGE
Trigger: TTCACCCCTGAGTTTCACTCATCTCCCAGCTGACCA...CTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp TCACGATGGCCAGCCAGCTCCTGGGGACTCCTTAGGTATTTGATAGACACGGAGTCACTCCCTGCGCACTaGACGTTGCTTTATTCATTG +
Preference number: 4 (lower is better)
Translates to: SRWPASSWGLLRYLIDTESLPAH*TLLYSL
Trigger: CAATGAATAAAGCAACGTTCAGTGCGCAGGGAGTGA...CTCCGTGTCTATCAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp CCTGAAACCCTCCCACCAGCCTGGGAGCCCGTTTTACAGGTGAGAAAATGGAGGGAGAGTAGCCAACATTaGCGAGCACTTACTTATACC +
Preference number: 4 (lower is better)
Translates to: PETLPPAWEPVLQVRKWRESSQH*RALTYT
Trigger: GGTATAAGTAAGTGCTCGTCAATGTTGGCTACTCTC...CCTCCATTTTCTCACCTGTAAAACGGGCTCCCAGGCTGGTGGGAGGGTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp TCTCGGGGTTGCTCACATGGAGGACTGCTTGGTGAGAGGCCGGTAGCACTGAAATTCACTAAGTCTCTGTaGCTCCTTGGCGGGTATAAT +
Preference number: 4 (lower is better)
Translates to: SRGCSHGGLLGERPVALKFTKSL*LLGGYN
Trigger: ATTATACCCGCCAAGGAGTCACAGAGACTTAGTGAA...TTTCAGTGCTACCGGCCTCTCACCAAGCAGTCCTCCATGTGAGCAACCCCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTATGGCCTCCGACTTCTaGAGGTCGAAGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLMASDF*RSKLLA
Trigger: AGCCAGAAGCTTCGACCTGCAGAAGTCGGAGGCCAT...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp TTCTCCCCGGCAGCTGACTTCCCTGAAGTGTTAAGTCCCAATCTTTCACCCTTTATGGCCTCCGACTTCTaGAGGTCGAAGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FSPAADFPEVLSPNLSPFMASDF*RSKLLA
Trigger: AGCCAGAAGCTTCGACCTGCAGAAGTCGGAGGCCAT...AAAGGGTGAAAGATTGGGACTTAACACTTCAGGGAAGTCAGCTGCCGGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGCCATCTGACATAAACTaGCACCTGAGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPEPSDIN*HLRTQP
Trigger: TGGCTGTGTCCTCAGGTGGCAGTTTATGTCAGATGG...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGAGCAACCAGCTACCCTaGTACTCCTCATTGCGATCT +
Preference number: 4 (lower is better)
Translates to: EMKAPEVCPPAQFLWASGSNQLP*YSSLRS
Trigger: AGATCGCAATGAGGAGTAGCAGGGTAGCTGGTTGCT...CCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAACACCCTCTCCGAGTaGTGCTCTCTTGATCCCACT +
Preference number: 4 (lower is better)
Translates to: VLQPSFFGLQGCAKMTATNTLSE*CSLDPT
Trigger: AGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTT...TGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACCATTCTCCCGAAACTTaGCCAATGCCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CPPAQFLWASGLCENDCYHSPET*PMPPSA
Trigger: GGCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATG...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402592.7
ENST00000615189.5
CDS-3UTR CCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTGAGAAAATAGTCATCTaGATTCGGCAGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPEKIVI*IRQGRQ
Trigger: CTGCCGGCCCTGCCGAATCCAGATGACTATTTTCTC...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402592.7
ENST00000615189.5
CDS-3UTR CCA 90 bp AGGCTGAGAACAGCAGACCCTTGGCATCCAGAGGTCCAATTATGTCGTACCAGACCTGACAGATACTGTTaGATCACCTCTGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RLRTADPWHPEVQLCRTRPDRYC*ITSGGC
Trigger: GCAGCCTCCAGAGGTGATCCAACAGTATCTGTCAGG...TCTGGTACGACATAATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCTCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR CCA 90 bp TGCACGCGTTGCATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTGCTCAGAACAGCAGACCCTTaGCATCCAGAGGTCCAATTA +
Preference number: 4 (lower is better)
Translates to: CTRCMPPTEMGLLSKTLLRTADP*HPEVQL
Trigger: TAATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCT...GAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTTCCTCCCCAACTTTGTaGTCTGGTGGGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPSSPTL*SGGHTL
Trigger: AAGAGTGTGCCCACCAGACCACAAAGTTGGGGAGGA...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGCACATAATACTTCCTaGGGATGTCACCCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPEAHNTS*GCHPRS
Trigger: ACTACGGGGGTGACATCCCCAGGAAGTATTATGTGC...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp ATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCACTTTGTGGTCTGGTaGGCACACTCTTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: MIALCGLVGTLLQKQLTLHFVVW*AHSCRS
Trigger: GCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTG...GAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR TCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTTTGCTCCCAGGACCATaGTCTTCTTACGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPLLPGP*SSYECP
Trigger: AGGACACTCGTAAGAAGATCATGGTCCTGGGAGCAA...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGAGGGTTGTGCGAAAATaGCTGCTACAAGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPERVVRK*LLQGVE
Trigger: TTCTACCCCTTGTAGCAGTCATTTTCGCACAACCCT...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TTCTCCCCGGCAGCTGACTTCCCTGAAGTGTTAAGTCCCAATCTTTCACCCTTTCTCAGTTCACCCAGGTaGGCAATGTGTGCACTTCAC +
Preference number: 4 (lower is better)
Translates to: FSPAADFPEVLSPNLSPFLSSPR*AMCALH
Trigger: GTGAAGTGCACACATTGCTCACCTGGGTGAACTGAG...AAAGGGTGAAAGATTGGGACTTAACACTTCAGGGAAGTCAGCTGCCGGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp CTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTGAAACTCAGATGGCCTCCGACTTCTaGAGGTCGAAGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLIVCVHSLVSWEMSETQMASDF*RSKLLA
Trigger: AGCCAGAAGCTTCGACCTGCAGAAGTCGGAGGCCAT...CTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp ACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGAGCCACGGGAAATCTaGACGCTGTGTTCATACTGC +
Preference number: 4 (lower is better)
Translates to: TEMKAPEVCPPAQFLWASEPREI*TLCSYC
Trigger: GCAGTATGAACACAGCGTGCAGATTTCCCGTGGCTC...TGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACTTATTTCGGGGTGCCTaGCCCCAGCTGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: CPPAQFLWASGLCENDCYLFRGA*PQLFHL
Trigger: AAGATGAAACAGCTGGGGGCAGGCACCCCGAAATAA...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTGGGCTTCAGGGTTGTaGGAAAATGACTGCTACAAG +
Preference number: 4 (lower is better)
Translates to: PAQFLWASGLCENDCYKGWASGL*ENDCYK
Trigger: CTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCA...CCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGACCTCATTCTCCCGAAACTTaGCCAATGCCTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: WEGASPRNICPVTDPVRPHSPET*PMPPSA
Trigger: GGCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATG...AGGTCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp TGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGAGAAAATAGTCATCTaGATTCGGCAGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: CLTEMKAPEVCPPAQFLWEKIVI*IRQGRQ
Trigger: CTGCCGGCCCTGCCGAATCCAGATGACTATTTTCTC...CCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402592.7
ENST00000615189.5
CDS-3UTR CCA 90 bp TGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGACCTCCTGACAGATACTGTTaGATCACCTCTGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WEGASPRNICPVTDPVRPPDRYC*ITSGGC
Trigger: GCAGCCTCCAGAGGTGATCCAACAGTATCTGTCAGG...AGGTCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTCCCCAACTGCAGGGATATGTCGTACCAGACTaGGCAGCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: LAVINYGDGLHLPPQLQGYVVPD*AAIQVI
Trigger: TATGACCTGGATGGCTGCCCAGTCTGGTACGACATA...TCCCTGCAGTTGGGGAGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR CCA 90 bp GTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTGATCCCATGCCCACCCAGAGAACAGCAGACCCTTaGCATCCAGAGGTCCAATTA +
Preference number: 4 (lower is better)
Translates to: VKAALLSICLPCDPMPTQRTADP*HPEVQL
Trigger: TAATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCT...CTGGGTGGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp TGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGACCTCCCAACTTTGTGGTCTaGTGGGCACACTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: WEGASPRNICPVTDPVRPPNFVV*WAHSCR
Trigger: TCTGCAAGAGTGTGCCCACCAGACCACAAAGTTGGG...AGGTCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTCCCAACTTTGTGGTCTaGTGGGCACACTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLPNFVV*WAHSCR
Trigger: TCTGCAAGAGTGTGCCCACCAGACCACAAAGTTGGG...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GAAGTTGGCACAGTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTGCACATAATACTTCCTaGGGATGTCACCCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: EVGTVYRTDRSYHDGQPAAHNTS*GCHPRS
Trigger: ACTACGGGGGTGACATCCCCAGGAAGTATTATGTGC...AGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACTGTGCCAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTAGATCATACTCCACTTGGTaGGAGGAGCCACGGGAAATC +
Preference number: 4 (lower is better)
Translates to: PSFFGLQGCAKMTATRGRSYSTW*EEPREI
Trigger: GATTTCCCGTGGCTCCTCCCACCAAGTGGAGTATGA...TCTACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGTCATACTCCACTTGGTaGGAGGAGCCACGGGAAATC +
Preference number: 4 (lower is better)
Translates to: CLTEMKAPEVCPPAQFLWSYSTW*EEPREI
Trigger: GATTTCCCGTGGCTCCTCCCACCAAGTGGAGTATGA...CCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGATCTCATACTCCACTTaGTGGGAGGAGCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: CLTEMKAPEVCPPAQFLWISYST*WEEPRE
Trigger: TTCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGAT...CCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TTCTGTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCTCTTCAGGGACCAGGTaGGAGTTGTACCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: FCLCDLWEGASPRNICPVSSGTR*ELYLWL
Trigger: CAACCAGAGGTACAACTCCCACCTGGTCCCTGAAGA...GACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CTCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGATCACAGGCAGAAAGCTaGACATGGGGCTTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LWEGASPRNICPVTDPVRSQAES*TWGFKA
Trigger: TGCCTTGAAGCCCCATGTCCAGCTTTCTGCCTGTGA...TCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTAGACCAGCCCAGTTTCTTTaGGCTTCAGGGTTGTGCGAA +
Preference number: 4 (lower is better)
Translates to: PSFFGLQGCAKMTATRGRPAQFL*ASGLCE
Trigger: TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG...TCTACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACACCTGACAGATACTGTTaGATCACCTTCCGGAGCATG +
Preference number: 4 (lower is better)
Translates to: VLQPSFFGLQGCAKMTATPDRYC*ITFRSM
Trigger: CATGCTCCGGAAGGTGATCCAACAGTATCTGTCAGG...TGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617837.4
CDS-3UTR CCA 90 bp ACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAAGACAACCCACCAGCTaGACCAATCAGAAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: TEMKAPEVCPPAQFLWASRQPTS*TNQKAS
Trigger: GCTTGCCTTCTGATTGGTCCAGCTGGTGGGTTGTCT...TGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp CCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGGCACTCGCATTTAACTaGATCAGTATGTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PAQFLWASGLCENDCYKGALAFN*ISMSPD
Trigger: GTCTGGGGACATACTGATCCAGTTAAATGCGAGTGC...CCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp GAAGTTGGCACAGTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTGCACCTGGTCAGGGCTaGTATGTTTCAGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: EVGTVYRTDRSYHDGQPAAPGQG*YVSVKP
Trigger: AGGTTTTACTGAAACATATCAGCCCTGACCAGGTGC...AGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACTGTGCCAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTAACATCCGCTCCATCTaGCATAAACTGCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLNIRSI*HKLPPE
Trigger: CTCAGGTGGCAGTTTATGTCAGATGGAGCGGATGTT...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAGGGTTGTGCGAAAATaGCTGCTACAAGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: CPPAQFLWASGLCENDCYRVVRK*LLQGVE
Trigger: TTCTACCCCTTGTAGCAGTCATTTTCGCACAACCCT...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCGAGTGCTGCTCTCTTaGTCCCACTTAGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: PLQSLFLCLTEMKAPEVCRVLLS*SHLAFL
Trigger: CAAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCG...ACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TCACGATGGCCAGCCAGCTCCTGGGGACTCCTTAGGTATTTGATAGACACGGAGGGTGAAGTTGTGATTTaGATCCAAACAGTGTGGATC +
Preference number: 4 (lower is better)
Translates to: SRWPASSWGLLRYLIDTEGEVVI*IQTVWI
Trigger: GATCCACACTGTTTGGATTCAAATCACAACTTCACC...CTCCGTGTCTATCAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp AGCAATGTGTGCACTTCACTAAGTCTCTGTGACTCCTTGGCGGGTATAATTGAGTGGTGGGCACACTCTTaGAGAAGCAGCTCACACTCC +
Preference number: 4 (lower is better)
Translates to: SNVCTSLSLCDSLAGIIEWWAHS*RSSSHS
Trigger: GGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCA...CTCAATTATACCCGCCAAGGAGTCACAGAGACTTAGTGAAGTGCACACATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTCCATCTGACATAAACTaGCACCTGAGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLPSDIN*HLRTQP
Trigger: TGGCTGTGTCCTCAGGTGGCAGTTTATGTCAGATGG...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTAGACCATCTGACATAAACTaGCACCTGAGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: PSFFGLQGCAKMTATRGRPSDIN*HLRTQP
Trigger: TGGCTGTGTCCTCAGGTGGCAGTTTATGTCAGATGG...TCTACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGAGGGGCTTCAAGGCATTaGCAAGGCAGAGATACTTAC +
Preference number: 4 (lower is better)
Translates to: LWEGASPRNICPVTDPVRGASRH*QGRDTY
Trigger: GTAAGTATCTCTGCCTTGGCAATGCCTTGAAGCCCC...TCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp CAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTTGGGCTTCAGGGTTGTaGGAAAATGACTGCTACAAG +
Preference number: 4 (lower is better)
Translates to: QPSFFGLQGCAKMTATRGWASGL*ENDCYK
Trigger: CTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCA...ACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GAAGTTGGCACAGTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTTTTTTGTCTCGGGGTTaGTCACATGGAGGACTGCTT +
Preference number: 4 (lower is better)
Translates to: EVGTVYRTDRSYHDGQPAFLSRG*SHGGLL
Trigger: AAGCAGTCCTCCATGTGAGCAACCCCGAGACAAAAA...AGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACTGTGCCAACTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GAAGTTGGCACAGTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCACAGAGATGGGACTaGTTAGTAAGACCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: EVGTVYRTDRSYHDGQPAPQRWD*LVRPCS
Trigger: TGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGG...AGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACTGTGCCAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTGAAACTCAGGAGAAAATAGTCATCTaGATTCGGCAGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LLIVCVHSLVSWEMSETQEKIVI*IRQGRQ
Trigger: CTGCCGGCCCTGCCGAATCCAGATGACTATTTTCTC...CTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CTCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGATATGTCGTACCAGACTaGGCAGCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: LWEGASPRNICPVTDPVRYVVPD*AAIQVI
Trigger: TATGACCTGGATGGCTGCCCAGTCTGGTACGACATA...TCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTAACTTTGTGGTCTGGTaGGCACACTCTTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLNFVVW*AHSCRS
Trigger: GCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTT...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTAGAGCACATAATACTTCCTaGGGATGTCACCCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: PSFFGLQGCAKMTATRGRAHNTS*GCHPRS
Trigger: ACTACGGGGGTGACATCCCCAGGAAGTATTATGTGC...TCTACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TCAGGGGTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTGATCCCATGCCCCATTCTTTGGTCAGCTaGGAGATGAGTGAAACTCAG +
Preference number: 4 (lower is better)
Translates to: SGVKAALLSICLPCDPMPHSLVS*EMSETQ
Trigger: CTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATG...GGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCACCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp AGGGAACAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCAATGATTGCACTTTGTaGTCTGGTGGGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: REQRAGSLVRLSYFRSPFNDCTL*SGGHTL
Trigger: AAGAGTGTGCCCACCAGACCACAAAGTGCAATCATT...GAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CCA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGTGGGTCATTTCCCTaGCGCTTTGTTTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLCGSFP*RFVCME
Trigger: CTCCATGCAAACAAAGCGCCAGGGAAATGACCCACA...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGATCCCACTTAGCATTTTTTGTGGGTCATTTCCCTaGCGCTTTGTTTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: DWQTPSPSAALLIPLSIFCGSFP*RFVCME
Trigger: CTCCATGCAAACAAAGCGCCAGGGAAATGACCCACA...AAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGAAACACCGGCAATGCTaGCGTGGAATTATTAGACAG +
Preference number: 4 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPEKHRQC*RGIIRQ
Trigger: CTGTCTAATAATTCCACGCCAGCATTGCCGGTGTTT...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
3UTR CAA 72 bp AGCAATGTGTGCACTTCACTAAGTCTCTGTGACTCCTaGGCGGGTATAATTGAGCGGCGTTGGAGACAATCC +
Preference number: 4 (lower is better)
Translates to: SNVCTSLSLCDS*AGIIERRWRQS
Trigger: GGATTGTCTCCAACGCCGCTCAATTATACCCGCCAAGGAGTCACAGAGACTTAGTGAAGTGCACACATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAGTCATAAATTATGGTaGTGGTCTCCACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CPPAQFLWASGLCENDCYSHKLW*WSPPSS
Trigger: GGAGGAAGGTGGAGACCATCACCATAATTTATGACT...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CTTGAGGCCAAGCCCCTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTAGTCATAAATTATGGTaGTGGTCTCCACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEAKPLAVINYGDGLHLPSHKLW*WSPPSS
Trigger: GGAGGAAGGTGGAGACCATCACCATAATTTATGACT...AGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAGGGGCTTGGCCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR TCA 90 bp CCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTAGTCATAAATTATGGTaGTGGTCTCCACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLQSLFLCLTEMKAPEVCSHKLW*WSPPSS
Trigger: GGAGGAAGGTGGAGACCATCACCATAATTTATGACT...ACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TTCTCCCCGGCAGCTGACTTCCCTGAAGTGTTAAGTCCCAATCTTTCACCCTTTGCACCTGGTCAGGGCTaGTATGTTTCAGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: FSPAADFPEVLSPNLSPFAPGQG*YVSVKP
Trigger: AGGTTTTACTGAAACATATCAGCCCTGACCAGGTGC...AAAGGGTGAAAGATTGGGACTTAACACTTCAGGGAAGTCAGCTGCCGGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp CTTTATTCATTGGTTAATTTTCCTAACAGCGTTGTAAACCCAGGCCGGGATGTCCCTAGCGGTGGGCATTaGATTTCACTCCCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: LYSLVNFPNSVVNPGRDVPSGGH*ISLPAH
Trigger: GTGCGCAGGGAGTGAAATTCAATGCCCACCGCTAGG...GACATCCCGGCCTGGGTTTACAACGCTGTTAGGAAAATTAACCAATGAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp CCCCTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTCCCCAACTGCAGTTGTCAATGTCCTTTTaGTTTCGGAACTCCACATGC +
Preference number: 4 (lower is better)
Translates to: PLAVINYGDGLHLPPQLQLSMSF*FRNSTC
Trigger: GCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAA...CTGCAGTTGGGGAGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR GCA 90 bp AGAACAGCAGACCCTTGGCATCCAGAGGTCCAATTATGTCGTACCAGACTGGGCTTGTCAATGTCCTTTTaGTTTCGGAACTCCACATGC +
Preference number: 4 (lower is better)
Translates to: RTADPWHPEVQLCRTRLGLSMSF*FRNSTC
Trigger: GCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAA...GCCCAGTCTGGTACGACATAATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR GCA 90 bp GTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCACCCCCTTGTCAATGTCCTTTTaGTTTCGGAACTCCACATGC +
Preference number: 4 (lower is better)
Translates to: VALKRALDDLLLAFTPTPLSMSF*FRNSTC
Trigger: GCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAA...GGGGGTGGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp CTCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGAATCACCTCTGGAGGCTaGCAGCTAATGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LWEGASPRNICPVTDPVRITSGG*QLMMLS
Trigger: TGACAACATCATTAGCTGGCAGCCTCCAGAGGTGAT...TCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp AGCAATGTGTGCACTTCACTAAGTCTCTGTGACTCCTTGGCGGGTATAATTGAGGAGCCACGGGAAATCTaGACGCTGTGTTCATACTGC +
Preference number: 4 (lower is better)
Translates to: SNVCTSLSLCDSLAGIIEEPREI*TLCSYC
Trigger: GCAGTATGAACACAGCGTGCAGATTTCCCGTGGCTC...CTCAATTATACCCGCCAAGGAGTCACAGAGACTTAGTGAAGTGCACACATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp TGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGTGGGCTTCAGGGTTGTaGGAAAATGACTGCTACAAG +
Preference number: 4 (lower is better)
Translates to: CLTEMKAPEVCPPAQFLWWASGL*ENDCYK
Trigger: CTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCA...CCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTCCACAGAGATGGGACTaGTTAGTAAGACCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLPQRWD*LVRPCS
Trigger: TGAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGG...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTTTATTCATTGGTTAATTTTCCTAACAGCGTTGTAAACCCAGGCCGGGATGTCACTCCCTGCACGCGTTaGATGCCTCCCACAGAGATG +
Preference number: 4 (lower is better)
Translates to: LYSLVNFPNSVVNPGRDVTPCTR*MPPTEM
Trigger: CATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGT...GACATCCCGGCCTGGGTTTACAACGCTGTTAGGAAAATTAACCAATGAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp GTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCACCCCCTTGAATTTCACTCCCTaGGCACTGAACGTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: VALKRALDDLLLAFTPTPLNFTP*ALNVAL
Trigger: TAAAGCAACGTTCAGTGCGCAGGGAGTGAAATTCAA...GGGGGTGGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp GTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTAACTTTGTGGTCTGGTaGGCACACTCTTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VNCLLIVCVHSLVSWEMSNFVVW*AHSCRS
Trigger: GCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTT...ACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCAAGCAGCTGCGATCCCTGTaGGTCATTTCCCTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: LPCYSSLRSKLMCSFRSKQLRSL*VISLAL
Trigger: AAGCGCCAGGGAAATGACCCACAGGGATCGCAGCTG...CTTGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp GGAGGATTTCTGCGCATGCGCCCTATCTATTGGCGTGAAACGGCTGCTGGGTCCCGTTGCTTTATTCATTaGTTAATTTTCCTAACAGCG +
Preference number: 4 (lower is better)
Translates to: GGFLRMRPIYWRETAAGSRCFIH*LIFLTA
Trigger: CGCTGTTAGGAAAATTAACCAATGAATAAAGCAACG...GGACCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCATGCGCAGAAATCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp AGCTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCAGCAGTTACCTCAAGCTaGGCTGGGCTTGTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SYPATPHCDLNLCVHLGAAVTSS*AGLVGW
Trigger: CCAACCTACAAGCCCAGCTCAGCTTGAGGTAACTGC...TGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp GTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGTTGTCAATGTCCTTTTaGTTTCGGAACTCCACATGC +
Preference number: 4 (lower is better)
Translates to: VSVTSGKEHPQEISVQSQLSMSF*FRNSTC
Trigger: GCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAA...CTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp GAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGCCTGCTACTCCTCATTaGGATCTAAACTTATGTGTT +
Preference number: 4 (lower is better)
Translates to: EMKAPEVCPPAQFLWASGPATPH*DLNLCV
Trigger: AACACATAAGTTTAGATCGCAATGAGGAGTAGCAGG...CCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp AAACAAGTCTCCAAGGCTAGATTTCTTCATCTATACAAGGAGAGGATTGAACTGATGCCTCCTTCTGCCTaGGGCTCAGATCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: KQVSKARFLHLYKERIELMPPSA*GSDRRL
Trigger: GAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCAT...CAGTTCAATCCTCTCCTTGTATAGATGAAGAAATCTAGCCTTGGAGACTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACAAATGATTGCACTTTGTaGTCTGGTGGGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: QMIALCGLVGTLLQKQLTNDCTL*SGGHTL
Trigger: AAGAGTGTGCCCACCAGACCACAAAGTGCAATCATT...TGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CCA 90 bp ATGAATGAATCGGGCAAGGGAGACAGAGTTGGGGTTAGTGATTACAACAGGAGGCGTTGGAGACAATCCTaGGTTCAAATCCTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: MNESGKGDRVGVSDYNRRRWRQS*VQILAV
Trigger: CACAGCTAGGATTTGAACCCAGGATTGTCTCCAACG...CCTCCTGTTGTAATCACTAACCCCAACTCTGTCTCCCTTGCCCGATTCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp AGCAATGTGTGCACTTCACTAAGTCTCTGTGACTCCTTGGCGGGTATAATTGAGGAGGCACAGAGAAGGTaGGTCATTTTCCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: SNVCTSLSLCDSLAGIIEEAQRR*VIFPEH
Trigger: GTGTTCTGGGAAAATGACCCACCTTCTCTGTGCCTC...CTCAATTATACCCGCCAAGGAGTCACAGAGACTTAGTGAAGTGCACACATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp TTTCCCATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCCATCTGCTTACCTTGTaGTCCCATGCCCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: FPILIFLCKLPAHSLCPFHLLTL*SHAHPA
Trigger: GGCTGGGTGGGCATGGGATCACAAGGTAAGCAGATG...GAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp AAACAAGTCTCCAAGGCTAGATTTCTTCATCTATACAAGGAGAGGATTGAACTGTCAGATCGCCGACTCTaGCGCTCATCGTGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: KQVSKARFLHLYKERIELSDRRL*RSSWLN
Trigger: GTTGAGCCACGATGAGCGGCAGAGTCGGCGATCTGA...CAGTTCAATCCTCTCCTTGTATAGATGAAGAAATCTAGCCTTGGAGACTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp AAACAAGTCTCCAAGGCTAGATTTCTTCATCTATACAAGGAGAGGATTGAACTGCCGAAACTTGGCCAATaGCTCCTTCTGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KQVSKARFLHLYKERIELPKLGQ*LLLPGA
Trigger: AGCCCCAGGCAGAAGGAGGCATTGGCCAAGTTTCGG...CAGTTCAATCCTCTCCTTGTATAGATGAAGAAATCTAGCCTTGGAGACTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCTGCTACTCCTCATTaGGATCTAAACTTATGTGTT +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPPATPH*DLNLCV
Trigger: AACACATAAGTTTAGATCGCAATGAGGAGTAGCAGG...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp TCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGACCTGCTGTTAACCAGTTaGGTCACCATAAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: SGKEHPQEISVQSQTQLDLLLTS*VTINKS
Trigger: AGACTTGTTTATGGTGACCCAACTGGTTAACAGCAG...GTCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp AGCTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCACCAGCCCAGTTTCTTTaGGCTTCAGGGTTGTGCGAA +
Preference number: 4 (lower is better)
Translates to: SYPATPHCDLNLCVHLGAPAQFL*ASGLCE
Trigger: TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG...TGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCAAGTGCCCTGATCAAAGATaGCGGAAGACAACCCACCAG +
Preference number: 4 (lower is better)
Translates to: LPCYSSLRSKLMCSFRSKCPDQR*RKTTHQ
Trigger: CTGGTGGGTTGTCTTCCGCCATCTTTGATCAGGGCA...CTTGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR TCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTGAAGCTCTGAGTCACTaGCAATCATTAGTAATCAAA +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPEALSH*QSLVIK
Trigger: TTTGATTACTAATGATTGTCAGTGACTCAGAGCTTC...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR TCA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACGAAGCTCTGAGTCACTaGCAATCATTAGTAATCAAA +
Preference number: 4 (lower is better)
Translates to: CPPAQFLWASGLCENDCYEALSH*QSLVIK
Trigger: TTTGATTACTAATGATTGTCAGTGACTCAGAGCTTC...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp CTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCAAGTATGTCGTACCAGACTaGGCAGCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: LPCYSSLRSKLMCSFRSKYVVPD*AAIQVI
Trigger: TATGACCTGGATGGCTGCCCAGTCTGGTACGACATA...CTTGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp CTTTATTCATTGGTTAATTTTCCTAACAGCGTTGTAAACCCAGGCCGGGATGTCATCACCTCTGGAGGCTaGCAGCTAATGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LYSLVNFPNSVVNPGRDVITSGG*QLMMLS
Trigger: TGACAACATCATTAGCTGGCAGCCTCCAGAGGTGAT...GACATCCCGGCCTGGGTTTACAACGCTGTTAGGAAAATTAACCAATGAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR GCA 90 bp CTTTATTCATTGGTTAATTTTCCTAACAGCGTTGTAAACCCAGGCCGGGATGTCTTTTTGTCTCGGGGTTaGTCACATGGAGGACTGCTT +
Preference number: 4 (lower is better)
Translates to: LYSLVNFPNSVVNPGRDVFLSRG*SHGGLL
Trigger: AAGCAGTCCTCCATGTGAGCAACCCCGAGACAAAAA...GACATCCCGGCCTGGGTTTACAACGCTGTTAGGAAAATTAACCAATGAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CCA 90 bp AAACAAGTCTCCAAGGCTAGATTTCTTCATCTATACAAGGAGAGGATTGAACTGTCCTCCCCAACTTTGTaGTCTGGTGGGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: KQVSKARFLHLYKERIELSSPTL*SGGHTL
Trigger: AAGAGTGTGCCCACCAGACCACAAAGTTGGGGAGGA...CAGTTCAATCCTCTCCTTGTATAGATGAAGAAATCTAGCCTTGGAGACTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CCA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCGTTGCTTTATTCATTaGTTAATTTTCCTAACAGCG +
Preference number: 4 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPRCFIH*LIFLTA
Trigger: CGCTGTTAGGAAAATTAACCAATGAATAAAGCAACG...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR GCA 90 bp TTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCCCATCTGACATAAACTaGCACCTGAGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: FLYSCVNCLLIVCVHSLVPSDIN*HLRTQP
Trigger: TGGCTGTGTCCTCAGGTGGCAGTTTATGTCAGATGG...GACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR GCA 90 bp ATGAATGAATCGGGCAAGGGAGACAGAGTTGGGGTTAGTGATTACAACAGGAGGCTGCGCACTGAACGTTaGTTTATTCATTGGTTAATT +
Preference number: 4 (lower is better)
Translates to: MNESGKGDRVGVSDYNRRLRTER*FIHWLI
Trigger: AATTAACCAATGAATAAAGCAACGTTCAGTGCGCAG...CCTCCTGTTGTAATCACTAACCCCAACTCTGTCTCCCTTGCCCGATTCATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CCA 90 bp ATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTTCATACTCCACTTGGTaGGAGGAGCCACGGGAAATC +
Preference number: 4 (lower is better)
Translates to: ILIFLCKLPAHSLCPFFGSYSTW*EEPREI
Trigger: GATTTCCCGTGGCTCCTCCCACCAAGTGGAGTATGA...ACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp AAATGTCTGTTTCCCATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTTGCTCCCAGGACCATaGTCTTCTTACGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: KCLFPILIFLCKLPAHSLLLPGP*SSYECP
Trigger: AGGACACTCGTAAGAAGATCATGGTCCTGGGAGCAA...CAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAACAGACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp TTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCGCACCTGGTCAGGGCTaGTATGTTTCAGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: FLYSCVNCLLIVCVHSLVAPGQG*YVSVKP
Trigger: AGGTTTTACTGAAACATATCAGCCCTGACCAGGTGC...GACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR TCA 90 bp TTTCCCATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCAGTCATAAATTATGGTaGTGGTCTCCACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FPILIFLCKLPAHSLCPFSHKLW*WSPPSS
Trigger: GGAGGAAGGTGGAGACCATCACCATAATTTATGACT...GAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
3UTR CAA 72 bp CACCTTTTCAAATGTCTGTTTCCCATTCTTATATTCTaGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTC +
Preference number: 4 (lower is better)
Translates to: HLFKCLFPILIF*CKLPAHSLCPF
Trigger: GAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAACAGACATTTGAAAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp GCGGCACGTACTGAGCAGCTGGCGGGGCAGGGTCTCCGCCGTCACTGTGAAGGCGCTGGGCGTGGCCCCTaGGGAAAGCTCACGCTAGAG +
Preference number: 5 (lower is better)
Translates to: AARTEQLAGQGLRRHCEGAGRGP*GKLTLE
Trigger: CTCTAGCGTGAGCTTTCCCAAGGGGCCACGCCCAGC...GCCTTCACAGTGACGGCGGAGACCCTGCCCCGCCAGCTGCTCAGTACGTGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS GCA 90 bp CACAGACTCGTCCTCGCCGCCACCCGGAGTAAAGTCCCAGCCTTTTaGCCGGGCCGCGGAGCTGGCAGCCAAGCCCCGCCTCTTAAAGGA +
Preference number: 5 (lower is better)
Translates to: HRLVLAATRSKVPAF*PGRGAGSQAPPLKG
Trigger: TCCTTTAAGAGGCGGGGCTTGGCTGCCAGCTCCGCGGCCCGGGCAAAAGGCTGGGACTTTACTCCGGGTGGCGGCGAGGACGAGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428195.5
CDS-3UTR CAA 90 bp GGCACCGCGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGCAGTCAGGAAGCGGGTaGGCGGGCACCGCGGGACAC +
Preference number: 5 (lower is better)
Translates to: GTAGHSDWQTPSPSAALLQSGSG*AGTAGH
Trigger: GTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGACTG...CAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GCGGCACGTACTGAGCAGCTGGCGGGGCAGGGTCTCCGCCGTCACTGTGAAGGCTCCCTGGCGCTTTGTTaGCATGGAGAACAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: AARTEQLAGQGLRRHCEGSLALC*HGEQRV
Trigger: CACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGA...GCCTTCACAGTGACGGCGGAGACCCTGCCCCGCCAGCTGCTCAGTACGTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp GCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGAACTCCCTGCACGCGTaGCATGCCTCCCACAGAGAT +
Preference number: 5 (lower is better)
Translates to: APSASQDELPRRGRGLALNSLHA*HASHRD
Trigger: ATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGTT...CAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CTCCAGGCCTGGCTACGCCGACCGGCACCTGAACTCCCTGCACGCGTTGCATGCAACTCCCTGCACGCGTaGCATGCCTCCCACAGAGAT +
Preference number: 5 (lower is better)
Translates to: LQAWLRRPAPELPARVACNSLHA*HASHRD
Trigger: ATCTCTGTGGGAGGCATGCAACGCGTGCAGGGAGTT...GCATGCAACGCGTGCAGGGAGTTCAGGTGCCGGTCGGCGTAGCCAGGCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GCTCCCTCAGCTTCGCAAGATGAGCTTCCCAGACGGGGCCGGGGCCTGGCTCTGCTCAGCAGGTCCTGTTaGGAGGCTGAGAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: APSASQDELPRRGRGLALLSRSC*EAENSR
Trigger: TCTGCTGTTCTCAGCCTCCAAACAGGACCTGCTGAG...CAGAGCCAGGCCCCGGCCCCGTCTGGGAAGCTCATCTTGCGAAGCTGAGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS CCA 90 bp TTCTGCAGGTCGAAGCTTCTGGCTTGGCCAATGCCTCCTTCTGCCTaGGGCTCAGATCGCCGACTCTGCCGCTCATCGTGGCTCAACCGC +
Preference number: 5 (lower is better)
Translates to: FCRSKLLAWPMPPSA*GSDRRLCRSSWLNR
Trigger: GCGGTTGAGCCACGATGAGCGGCAGAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGCCAAGCCAGAAGCTTCGACCTGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428195.5
ENST00000452649.1
ENST00000617837.4
CDS GCA 90 bp CTCCTCATTCCATGGCATCGAGGAGCAAAGAGAAGGGCAGGGTTTTaGCCAAGGTCGCACAGCGGCTTGGTGCCGGGGCAGGAGCTATCC +
Preference number: 5 (lower is better)
Translates to: LLIPWHRGAKRRAGF*PRSHSGLVPGQELS
Trigger: GGATAGCTCCTGCCCCGGCACCAAGCCGCTGTGCGACCTTGGGCAAAACCCTGCCCTTCTCTTTGCTCCTCGATGCCATGGAATGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429917.5
CDS CCA 90 bp CATCCTGGACATTCTCCCGAAACTTGGCCAATGCCTCCTTCTGCCTaGGGCTCAGATCGCCGACTCTGCCGCTCATCGTGGCTCAACCGC +
Preference number: 5 (lower is better)
Translates to: HPGHSPETWPMPPSA*GSDRRLCRSSWLNR
Trigger: GCGGTTGAGCCACGATGAGCGGCAGAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATGTCCAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402592.7
ENST00000405717.7
ENST00000416523.5
ENST00000437022.5
ENST00000615189.5
ENST00000619483.4
CDS-3UTR CAA 90 bp GTCAGGAAGCGGGTTGGCGGGCACCGCGGGACACTCAGACTGGCAAACACCCTCGAGAACAGCAGACCCTaGGCATCCAGAGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: VRKRVGGHRGTLRLANTLENSRP*ASRGPI
Trigger: AATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCTC...GAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GGCACCGCGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGCCTTCCTCCCCAACTTaGTGGTCTGGTGGGCACACT +
Preference number: 5 (lower is better)
Translates to: GTAGHSDWQTPSPSAALLPSSPT*WSGGHT
Trigger: AGTGTGCCCACCAGACCACAAAGTTGGGGAGGAAGG...CAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGCGCCCGGACTCACACTaGGCTCGCACGGGCTACGCG +
Preference number: 5 (lower is better)
Translates to: EMKAPEVCPPAQFLWASGRPDSH*ARTGYA
Trigger: CGCGTAGCCCGTGCGAGCCAAGTGTGAGTCCGGGCG...CCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp CACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCGGCTTCCAGAGATGCTaGAGGCCAAGCCCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: HFVVWWAHSCRSSSHSRIGFQRC*RPSPSQ
Trigger: CTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCC...GATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR CAA 90 bp TACAACAGGAGGAAGCCTTCCCCCGCTGGACCTCAGTTCACCCAGGTGAGCAATGGCTTCCAGAGATGCTaGAGGCCAAGCCCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: YNRRKPSPAGPQFTQVSNGFQRC*RPSPSQ
Trigger: CTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCC...ATTGCTCACCTGGGTGAACTGAGGTCCAGCGGGGGAAGGCTTCCTCCTGTTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp CACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCCCGCATCCTCAGCAGGTCCTGTTaGGAGGCTCTGGAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HFVVWWAHSCRSSSHSRILSRSC*EALEAA
Trigger: GGCAGCCTCCAGAGCCTCCAAACAGGACCTGCTGAG...GATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437022.5
CDS-3UTR CAA 90 bp AGGGAAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCCCAGACTGAGCTTCTaGGGGACAGGATGTTGGATG +
Preference number: 5 (lower is better)
Translates to: RERRSRQVWGRLPMFSKAPRLSF*GTGCWM
Trigger: CATCCAACATCCTGTCCCCAAGAAGCTCAGTCTGGG...GGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS TCA 90 bp GGGCCGGCAGCACATCCTGGACATTCTCCCGAAACCGGGTCTGTCTaGGTCCAGAGCACACACTCTTTCCACCATGGTCTTCTGCCCCAT +
Preference number: 5 (lower is better)
Translates to: GPAAHPGHSPETGSV*VQSTHSFHHGLLPH
Trigger: ATGGGGCAGAAGACCATGGTGGAAAGAGTGTGTGCTCTGGACTCAGACAGACCCGGTTTCGGGAGAATGTCCAGGATGTGCTGCCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415072.1
CDS GCA 90 bp GTCTCCACCTTCCTCCCCAACTTTGTGGTCTGGTGGGCACACTCTTaGAGAAGCAGCTCACACTCCCGCATCTTGGTCCTCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VSTFLPNFVVWWAHS*RSSSHSRILVLSRS
Trigger: GGACCTGCTGAGGACCAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTTGGGGAGGAAGGTGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405717.7
ENST00000428195.5
ENST00000459728.5
ENST00000464335.5
ENST00000615189.5
ENST00000617837.4
ENST00000619483.4
CDS-3UTR CAA 90 bp ATGCGCCCTATCTATTGGCGTGAAACGGCTGCTGGGTCCGGGTCCCTGACGCCGGGACTCCTTAGGTATTaGATAGACACGGAGACCCAC +
Preference number: 5 (lower is better)
Translates to: MRPIYWRETAAGSGSLTPGLLRY*IDTETH
Trigger: GTGGGTCTCCGTGTCTATCAAATACCTAAGGAGTCC...CGGCGTCAGGGACCCGGACCCAGCAGCCGTTTCACGCCAATAGATAGGGCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGGCTTCCAGAGATGCTaGAGGCCAAGCCCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPEGFQRC*RPSPSQ
Trigger: CTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCC...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CGTGAAACGGCTGCTGGGTCCGGGTCCCTGACGCCGTCTGAGTTTGGGCCTCTTATCTTGGATTTGCACTaGGGGTTTCCATCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: RETAAGSGSLTPSEFGPLILDLH*GFPSGS
Trigger: TGACCCTGATGGAAACCCCAAGTGCAAATCCAAGAT...AAGAGGCCCAAACTCAGACGGCGTCAGGGACCCGGACCCAGCAGCCGTTTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGGGACCAGGTGGGAGTaGTACCTCTGGTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPEGTRWE*YLWLGS
Trigger: GCTGCCCAACCAGAGGTACAACTCCCACCTGGTCCC...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp AGGGAAAGGCGTTCCCGCCAGGTCTGGGGCCGCCTTCCCATGTTCTCTAAAGCCCTTTGGGCTTCAGGGTaGTGCGAAAATGACTGCTAC +
Preference number: 5 (lower is better)
Translates to: RERRSRQVWGRLPMFSKALWASG*CENDCY
Trigger: GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAG...GGCTTTAGAGAACATGGGAAGGCGGCCCCAGACCTGGCGGGAACGCCTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GGCACCGCGGGACACTCAGACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGGGACTCCTTAGGTATTaGATAGACACGGAGACCCAC +
Preference number: 5 (lower is better)
Translates to: GTAGHSDWQTPSPSAALLGLLRY*IDTETH
Trigger: GTGGGTCTCCGTGTCTATCAAATACCTAAGGAGTCC...CAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTCTGAGTGTCCCGCGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGAGCACCTGTGGTTCGTaGGCGGGGCTCGTGGGATTG +
Preference number: 5 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPESTCGS*AGLVGL
Trigger: CAATCCCACGAGCCCCGCCAACGAACCACAGGTGCT...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CCTGAAACCCTCCCACCAGCCTGGGAGCCCGTTTTACAGGTGAGAAAATGGAGGCTGAGTTTGGGCCTCTaGAGTGAGAGGCAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: PETLPPAWEPVLQVRKWRLSLGL*SERQRG
Trigger: TCCTCGCTGCCTCTCACTCAAGAGGCCCAAACTCAG...CCTCCATTTTCTCACCTGTAAAACGGGCTCCCAGGCTGGTGGGAGGGTTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp TGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACGGCTTCCAGAGATGCTaGAGGCCAAGCCCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: CPPAQFLWASGLCENDCYGFQRC*RPSPSQ
Trigger: CTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCC...GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTGGGACCAGGTGGGAGTaGTACCTCTGGTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPGTRWE*YLWLGS
Trigger: GCTGCCCAACCAGAGGTACAACTCCCACCTGGTCCC...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp TTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCTTGTCGAAGCTTCTGGCTaGGCCAATGCCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LQDRQILSRWPASSWGLLVEASG*ANASFC
Trigger: GCAGAAGGAGGCATTGGCCAAGCCAGAAGCTTCGAC...AAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617837.4
CDS-3UTR CAA 90 bp TTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCTTTCCCTGGCGCTTTGTTaGCATGGAGAACAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: LQDRQILSRWPASSWGLLSLALC*HGEQRV
Trigger: CACCCGCTGTTCTCCATGCAAACAAAGCGCCAGGGA...AAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTAGCACCTGTGGTTCGTaGGCGGGGCTCGTGGGATTG +
Preference number: 5 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPSTCGS*AGLVGL
Trigger: CAATCCCACGAGCCCCGCCAACGAACCACAGGTGCT...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS CCA 90 bp CACCTGAGGACACAGCCAGGGAAGAGGATCTCATACTCCACTTGGTaGGAGGAGCCACGGGAAATCTGCACGCTGTGTTCATACTGCTGT +
Preference number: 5 (lower is better)
Translates to: HLRTQPGKRISYSTW*EEPREICTLCSYCC
Trigger: ACAGCAGTATGAACACAGCGTGCAGATTTCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGATCCTCTTCCCTGGCTGTGTCCTCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402592.7
ENST00000405717.7
ENST00000464335.5
ENST00000615189.5
ENST00000617837.4
ENST00000619483.4
ENST00000620251.1
CDS-3UTR CAA 90 bp GAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGCCTTCCTCCCCAACTTaGTGGTCTGGTGGGCACACT +
Preference number: 5 (lower is better)
Translates to: EMKAPEVCPPAQFLWASGPSSPT*WSGGHT
Trigger: AGTGTGCCCACCAGACCACAAAGTTGGGGAGGAAGG...CCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp TCAGGGGTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTGATCCCATGCCCGATCTCATACTCCACTaGGTGGGAGGAGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: SGVKAALLSICLPCDPMPDLILH*VGGATG
Trigger: TCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGATC...GGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCACCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS TCA 90 bp TGGTCTCACACGGCTTCCTATAAAACATGGCATTTGTGCTGGGCTTaGAGGACTTCAAAGGCAGCGGGGGAGAGAGGTGGGCAACTCAGG +
Preference number: 5 (lower is better)
Translates to: WSHTASYKTWHLCWA*RTSKAAGERGGQLR
Trigger: CCTGAGTTGCCCACCTCTCTCCCCCGCTGCCTTTGAAGTCCTTCAAGCCCAGCACAAATGCCATGTTTTATAGGAAGCCGTGTGAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415072.1
CDS TCA 90 bp AAGCTTCTGGCTTCTTGCCTTCTGAGGAGCATAAACCTTAAGTCCTaGACCAGGCAGGGGTCTGGGATGCAAGATAGGGGACGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: KLLASCLLRSINLKS*TRQGSGMQDRGRLV
Trigger: GACCAGCCGTCCCCTATCTTGCATCCCAGACCCCTGCCTGGTTCAGGACTTAAGGTTTATGCTCCTCAGAAGGCAAGAAGCCAGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429917.5
CDS TCA 90 bp TCTCCCGAAACTTCTTGCCTTCTGAGGAGCATAAACCTTAAGTCCTaGACCAGGCAGGGGTCTGGGATGCAAGATAGGGGACGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: SPETSCLLRSINLKS*TRQGSGMQDRGRLV
Trigger: GACCAGCCGTCCCCTATCTTGCATCCCAGACCCCTGCCTGGTTCAGGACTTAAGGTTTATGCTCCTCAGAAGGCAAGAAGTTTCGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459728.5
CDS CCA 90 bp CTGAGTCCAGAGCACACACTCTTTCCACCATGGTCTTCTGCCCCATaGAAGGATGAGGAGTTTGCTGGGGAGCAGAGGGAAGAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: LSPEHTLFPPWSSAP*KDEEFAGEQREERG
Trigger: ACCTCTTTCTTCCCTCTGCTCCCCAGCAAACTCCTCATCCTTCCATGGGGCAGAAGACCATGGTGGAAAGAGTGTGTGCTCTGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415072.1
CDS-3UTR CAA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGCTCAGCAGGTCCTGTTaGGAGGCTGAGAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPELSRSC*EAENSR
Trigger: TCTGCTGTTCTCAGCCTCCAAACAGGACCTGCTGAG...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTGATCTCATACTCCACTaGGTGGGAGGAGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: LQSLFLCLTEMKAPEVCPDLILH*VGGATG
Trigger: TCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGATC...AGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAACTTTGGGCTTCAGGGTaGTGCGAAAATGACTGCTAC +
Preference number: 5 (lower is better)
Translates to: APEVCPPAQFLWASGLCELWASG*CENDCY
Trigger: GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAG...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCACCCCCTCCAGCCCAGTTTCTTaGGGCTTCAGGGTTGTGCGA +
Preference number: 5 (lower is better)
Translates to: VALKRALDDLLLAFTPTPSSPVS*GFRVVR
Trigger: TCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGA...GGGGGTGGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp AGCTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCACAGTCAGGAAGCGGGTaGGCGGGCACCGCGGGACAC +
Preference number: 5 (lower is better)
Translates to: SYPATPHCDLNLCVHLGAQSGSG*AGTAGH
Trigger: GTGTCCCGCGGTGCCCGCCAACCCGCTTCCTGACTG...TGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS CCA 90 bp TGGAATGTGCATTTGAGCCAGGCATCCCTGTTCACCTCTAGCCTCTaGCGGCTCATACCTTGGATTTGCACTTGGGGTTTCCATCAGGGT +
Preference number: 5 (lower is better)
Translates to: WNVHLSQASLFTSSL*RLIPWICTWGFHQG
Trigger: ACCCTGATGGAAACCCCAAGTGCAAATCCAAGGTATGAGCCGCCAGAGGCTAGAGGTGAACAGGGATGCCTGGCTCAAATGCACATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619483.4
CDS-3UTR CAA 90 bp CCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGACATTCTCCCGAAACTaGGCCAATGCCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PAQFLWASGLCENDCYKGTFSRN*ANASFC
Trigger: GCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATGT...CCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402592.7
ENST00000615189.5
CDS-3UTR CAA 90 bp GGTGAGAGGCCGGTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACATTCTCCCGAAACTaGGCCAATGCCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GERPVALKRALDDLLLAFTFSRN*ANASFC
Trigger: GCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATGT...GAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTACCGGCCTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp AGAACAGCAGACCCTTGGCATCCAGAGGTCCAATTATGTCGTACCAGACTGGGCGAGAACAGCAGACCCTaGGCATCCAGAGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: RTADPWHPEVQLCRTRLGENSRP*ASRGPI
Trigger: AATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCTC...GCCCAGTCTGGTACGACATAATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR CAA 90 bp TGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGACCTCCTTCCTCCCCAACTTaGTGGTCTGGTGGGCACACT +
Preference number: 5 (lower is better)
Translates to: WEGASPRNICPVTDPVRPPSSPT*WSGGHT
Trigger: AGTGTGCCCACCAGACCACAAAGTTGGGGAGGAAGG...AGGTCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp ACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGATCTCATACTCCACTaGGTGGGAGGAGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: TEMKAPEVCPPAQFLWASDLILH*VGGATG
Trigger: TCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGATC...TGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GACTGGCAAACACCCTCTCCGAGTGCTGCTCTCTTGATCCCACTTAGCATTTTTGATCTCATACTCCACTaGGTGGGAGGAGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: DWQTPSPSAALLIPLSIFDLILH*VGGATG
Trigger: TCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGATC...AAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGGAGAGGGTGTTTGCCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTTCCAGCCCAGTTTCTTaGGGCTTCAGGGTTGTGCGA +
Preference number: 5 (lower is better)
Translates to: PLQSLFLCLTEMKAPEVCSSPVS*GFRVVR
Trigger: TCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGA...ACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACAGTCGAAGCTTCTGGCTaGGCCAATGCCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: QMIALCGLVGTLLQKQLTVEASG*ANASFC
Trigger: GCAGAAGGAGGCATTGGCCAAGCCAGAAGCTTCGAC...TGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR CAA 90 bp TCACGATGGCCAGCCAGCTCCTGGGGACTCCTTAGGTATTTGATAGACACGGAGATTTTTGTCTCGGGGTaGCTCACATGGAGGACTGCT +
Preference number: 5 (lower is better)
Translates to: SRWPASSWGLLRYLIDTEIFVSG*LTWRTA
Trigger: AGCAGTCCTCCATGTGAGCAACCCCGAGACAAAAAT...CTCCGTGTCTATCAAATACCTAAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTTGGGTGGGAGAAAAGTaGATGGGGAACGCAGCGGTT +
Preference number: 5 (lower is better)
Translates to: QPSFFGLQGCAKMTATRGWVGEK*MGNAAV
Trigger: AACCGCTGCGTTCCCCATCAACTTTTCTCCCACCCA...ACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp GAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGAGTCTCTGTGACTCCTaGGCGGGTATAATTGAGCGG +
Preference number: 5 (lower is better)
Translates to: EMKAPEVCPPAQFLWASGSLCDS*AGIIER
Trigger: CCGCTCAATTATACCCGCCAAGGAGTCACAGAGACT...CCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS CCA 90 bp GATGTCACCCCCGTAGTTGATCTAGAAGCATGGCATGGAGTGAACTaGAATGTGCATTTGAGCCAGGCATCCCTGTTCACCTCTAGCCTC +
Preference number: 5 (lower is better)
Translates to: DVTPVVDLEAWHGVN*NVHLSQASLFTSSL
Trigger: GAGGCTAGAGGTGAACAGGGATGCCTGGCTCAAATGCACATTCCAGTTCACTCCATGCCATGCTTCTAGATCAACTACGGGGGTGACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619483.4
CDS-3UTR CAA 90 bp CTTGAGGCCAAGCCCCTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTACATTCTCCCGAAACTaGGCCAATGCCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LEAKPLAVINYGDGLHLPTFSRN*ANASFC
Trigger: GCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATGT...AGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAGGGGCTTGGCCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437022.5
CDS-3UTR CAA 90 bp CAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCAGCAGGTCCTGTTaGGAGGCTGAGAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: QMIALCGLVGTLLQKQLTLSRSC*EAENSR
Trigger: TCTGCTGTTCTCAGCCTCCAAACAGGACCTGCTGAG...TGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452649.1
CDS-3UTR CAA 90 bp GCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAGCCACAGGAAACAGTTaGGGGGCTTTAACAACAAAA +
Preference number: 5 (lower is better)
Translates to: APEVCPPAQFLWASGLCEATGNS*GALTTK
Trigger: TTTTGTTGTTAAAGCCCCCAAACTGTTTCCTGTGGC...TTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp TCAGGGGTGAAGGCTGCACTTTTGAGCATCTGCTTACCTTGTGATCCCATGCCCTGGGGCTTCAAGGCATaGCCAAGGCAGAGATACTTA +
Preference number: 5 (lower is better)
Translates to: SGVKAALLSICLPCDPMPWGFKA*PRQRYL
Trigger: TAAGTATCTCTGCCTTGGCAATGCCTTGAAGCCCCA...GGGCATGGGATCACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCACCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp GGAATTATTAGACAGTCCCTAAAACCACGTGATCGCTGCTCCTCCGCCTCCCTCCTTTGGGCTTCAGGGTaGTGCGAAAATGACTGCTAC +
Preference number: 5 (lower is better)
Translates to: GIIRQSLKPRDRCSSASLLWASG*CENDCY
Trigger: GTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAG...GAGGGAGGCGGAGGAGCAGCGATCACGTGGTTTTAGGGACTGTCTAATAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp GAAGTTGGCACAGTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCATTTCCCTGGCGCTTaGTTTGCATGGAGAACAGCG +
Preference number: 5 (lower is better)
Translates to: EVGTVYRTDRSYHDGQPAHFPGA*FAWRTA
Trigger: CGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATG...AGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACTGTGCCAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp TTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTCCTGGGGACTCCTTTCCCACTTAGCATTTTaGTCTCGGGGTTGCTCACAT +
Preference number: 5 (lower is better)
Translates to: LQDRQILSRWPASSWGLLSHLAF*SRGCSH
Trigger: ATGTGAGCAACCCCGAGACAAAAATGCTAAGTGGGA...AAGGAGTCCCCAGGAGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp TGCACGCGTTGCATGCCTCCCACAGAGATGGGACTGCTTAGTAAGACCTTGCTCCCGAGTGCTGCTCTCTaGATCCCACTTAGCATTTTT +
Preference number: 5 (lower is better)
Translates to: CTRCMPPTEMGLLSKTLLPSAAL*IPLSIF
Trigger: AAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGG...GAGCAAGGTCTTACTAAGCAGTCCCATCTCTGTGGGAGGCATGCAACGCGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCAGGGCTGCTTAGTAAGACCTaGCTCAGGTCAGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: EMKAPEVCPPAQFLWASGLLSKT*LRSVRK
Trigger: CTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAG...CCCTGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GGAGACCCACTGCAGTCGCTCTTCCTCTGCCTAACTGAAATGAAAGCTCCTGAGCTGCTTAGTAAGACCTaGCTCAGGTCAGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GDPLQSLFLCLTEMKAPELLSKT*LRSVRK
Trigger: CTTCCTGACTGACCTGAGCAAGGTCTTACTAAGCAG...CTCAGGAGCTTTCATTTCAGTTAGGCAGAGGAAGAGCGACTGCAGTGGGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS CCA 90 bp GAGCCAAAAATCCATGGAGGAAGAGGAACCTCACAGGCAGAAAGCTaGACATGGGGCTTCAAGGCATTGCCAAGGCAGAGATACTTACAG +
Preference number: 5 (lower is better)
Translates to: EPKIHGGRGTSQAES*TWGFKALPRQRYLQ
Trigger: CTGTAAGTATCTCTGCCTTGGCAATGCCTTGAAGCCCCATGTCCAGCTTTCTGCCTGTGAGGTTCCTCTTCCTCCATGGATTTTTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405717.7
ENST00000464335.5
CDS-3UTR CAA 90 bp TGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGACCCAGTTAGACCTACATTCTCCCGAAACTaGGCCAATGCCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: WEGASPRNICPVTDPVRPTFSRN*ANASFC
Trigger: GCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATGT...AGGTCTAACTGGGTCTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp CCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGTAGAGAGAACAGCAGACCCTaGGCATCCAGAGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: PSFFGLQGCAKMTATRGRENSRP*ASRGPI
Trigger: AATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCTC...TCTACCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTCTCAGCAGGTCCTGTTaGGAGGCTGAGAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: VNCLLIVCVHSLVSWEMSLSRSC*EAENSR
Trigger: TCTGCTGTTCTCAGCCTCCAAACAGGACCTGCTGAG...ACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp CCAGCCCAGTTTCTTTGGGCTTCAGGGTTGTGCGAAAATGACTGCTACAAGGGGATCTTGGATTTGCACTaGGGGTTTCCATCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: PAQFLWASGLCENDCYKGILDLH*GFPSGS
Trigger: TGACCCTGATGGAAACCCCAAGTGCAAATCCAAGAT...CCCCTTGTAGCAGTCATTTTCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp AGGCCAAATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCCAAATGATTGCACTTaGTGGTCTGGTGGGCACACT +
Preference number: 5 (lower is better)
Translates to: RPNDCTLWSGGHTLAEAAPNDCT*WSGGHT
Trigger: AGTGTGCCCACCAGACCACAAAGTGCAATCATTTGG...AGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCATTTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CAA 90 bp CTCGCAGTCATAAATTATGGTGATGGTCTCCACCTTCCTCCCCAACTGCAGGGACCAAATGATTGCACTTaGTGGTCTGGTGGGCACACT +
Preference number: 5 (lower is better)
Translates to: LAVINYGDGLHLPPQLQGPNDCT*WSGGHT
Trigger: AGTGTGCCCACCAGACCACAAAGTGCAATCATTTGG...TCCCTGCAGTTGGGGAGGAAGGTGGAGACCATCACCATAATTTATGACTGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CAA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTCATTTCCCTGGCGCTTaGTTTGCATGGAGAACAGCG +
Preference number: 5 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLHFPGA*FAWRTA
Trigger: CGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATG...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS TCA 90 bp CCTGGTCTCGCACATAATACTTCCTGGGGATGTCACCCCCGTAGTTaGTCTAGAAGCATGGCATGGAGTGAACTGGAATGTGCATTTGAG +
Preference number: 5 (lower is better)
Translates to: PGLAHNTSWGCHPRS*SRSMAWSELECAFE
Trigger: CTCAAATGCACATTCCAGTTCACTCCATGCCATGCTTCTAGATCAACTACGGGGGTGACATCCCCAGGAAGTATTATGTGCGAGACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619483.4
CDS CCA 90 bp AAAATCCATGGAGGAAGAGGAACCTCACAGGCAGAAAGCTGGACATaGGGCTTCAAGGCATTGCCAAGGCAGAGATACTTACAGATGCCA +
Preference number: 5 (lower is better)
Translates to: KIHGGRGTSQAESWT*GFKALPRQRYLQMP
Trigger: TGGCATCTGTAAGTATCTCTGCCTTGGCAATGCCTTGAAGCCCCATGTCCAGCTTTCTGCCTGTGAGGTTCCTCTTCCTCCATGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405717.7
ENST00000464335.5
CDS CCA 90 bp ATAATACTTCCTGGGGATGTCACCCCCGTAGTTGATCTAGAAGCATaGCATGGAGTGAACTGGAATGTGCATTTGAGCCAGGCATCCCTG +
Preference number: 5 (lower is better)
Translates to: IILPGDVTPVVDLEA*HGVNWNVHLSQASL
Trigger: CAGGGATGCCTGGCTCAAATGCACATTCCAGTTCACTCCATGCCATGCTTCTAGATCAACTACGGGGGTGACATCCCCAGGAAGTATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619483.4
CDS-3UTR CAA 90 bp CTGCTCATAGTCTGTGTCCATTCTTTGGTCAGCTGGGAGATGAGTGAAACTCAGGAGAACAGCAGACCCTaGGCATCCAGAGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: LLIVCVHSLVSWEMSETQENSRP*ASRGPI
Trigger: AATTGGACCTCTGGATGCCAAGGGTCTGCTGTTCTC...CTGAGTTTCACTCATCTCCCAGCTGACCAAAGAATGGACACAGACTATGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp CCCAGCCAGTTCTGTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATATCGCCACAGGAAACAGTTaGGGGGCTTTAACAACAAAA +
Preference number: 5 (lower is better)
Translates to: PSQFCLCDLWEGASPRNIATGNS*GALTTK
Trigger: TTTTGTTGTTAAAGCCCCCAAACTGTTTCCTGTGGC...GATATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGACAGAACTGGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS GCA 90 bp TTGGGGCACCAGGCTGAATTTGACCCTCATGCCAGTAGAAATGTGTaGATTTCAACACCACATGCAGAGTTCTGTCATGTCACGTCTTGC +
Preference number: 5 (lower is better)
Translates to: LGHQAEFDPHASRNV*ISTPHAEFCHVTSC
Trigger: GCAAGACGTGACATGACAGAACTCTGCATGTGGTGTTGAAATGCACACATTTCTACTGGCATGAGGGTCAAATTCAGCCTGGTGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484486.5
ENST00000485482.5
CDS-3UTR CAA 90 bp TTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCGGCTTCCAGAGATGCTaGAGGCCAAGCCCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: FLYSCVNCLLIVCVHSLVGFQRC*RPSPSQ
Trigger: CTGCGAGGGGCTTGGCCTCAAGCATCTCTGGAAGCC...GACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp GAAGTTGGCACAGTTTACAGGACAGACAGATCCTATCACGATGGCCAGCCAGCTGCCACAGGAAACAGTTaGGGGGCTTTAACAACAAAA +
Preference number: 5 (lower is better)
Translates to: EVGTVYRTDRSYHDGQPAATGNS*GALTTK
Trigger: TTTTGTTGTTAAAGCCCCCAAACTGTTTCCTGTGGC...AGCTGGCTGGCCATCGTGATAGGATCTGTCTGTCCTGTAAACTGTGCCAACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CTCTGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTATCTTGGATTTGCACTaGGGGTTTCCATCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LCLTEMKAPEVCPPAQFLILDLH*GFPSGS
Trigger: TGACCCTGATGGAAACCCCAAGTGCAAATCCAAGAT...AAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp TTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCGGGACCAGGTGGGAGTaGTACCTCTGGTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: FLYSCVNCLLIVCVHSLVGTRWE*YLWLGS
Trigger: GCTGCCCAACCAGAGGTACAACTCCCACCTGGTCCC...GACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp ACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCTTCACCGAGTGCTGCTCTCTaGATCCCACTTAGCATTTTT +
Preference number: 5 (lower is better)
Translates to: TEMKAPEVCPPAQFLWASPSAAL*IPLSIF
Trigger: AAAAATGCTAAGTGGGATCAAGAGAGCAGCACTCGG...TGAAGCCCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp CTGCGATCCCTGTGGGTCATTTCCCTGGCGCTTTGTTTGCATGGAGAACAGCGGAACAGTCACCATTTATaGAGTTTATTGCCAGTCTAC +
Preference number: 5 (lower is better)
Translates to: LRSLWVISLALCLHGEQRNSHHL*SLLPVY
Trigger: GTAGACTGGCAATAAACTCAATAAATGGTGACTGTT...CCGCTGTTCTCCATGCAAACAAAGCGCCAGGGAAATGACCCACAGGGATCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp AGGGAACAGAGAGCAGGAAGTCTTGTCAGGCTGTCCTACTTCAGAAGCCCGTTCTGCCAGCTAATGATGTaGTCAATGTCCTTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: REQRAGSLVRLSYFRSPFCQLMM*SMSFCF
Trigger: AAAGCAAAAGGACATTGACAACATCATTAGCTGGCA...GAACGGGCTTCTGAAGTAGGACAGCCTGACAAGACTTCCTGCTCTCTGTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CAA 90 bp GTAGCACTGAAAAGGGCACTGGACGATCTGCTTTTAGCATTCACTCCCACCCCCTGCCAGCTAATGATGTaGTCAATGTCCTTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: VALKRALDDLLLAFTPTPCQLMM*SMSFCF
Trigger: AAAGCAAAAGGACATTGACAACATCATTAGCTGGCA...GGGGGTGGGAGTGAATGCTAAAAGCAGATCGTCCAGTGCCCTTTTCAGTGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp TGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGGCCACAGGAAACAGTTaGGGGGCTTTAACAACAAAA +
Preference number: 5 (lower is better)
Translates to: CLTEMKAPEVCPPAQFLWATGNS*GALTTK
Trigger: TTTTGTTGTTAAAGCCCCCAAACTGTTTCCTGTGGC...CCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp AGCTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCATCCAGCCCAGTTTCTTaGGGCTTCAGGGTTGTGCGA +
Preference number: 5 (lower is better)
Translates to: SYPATPHCDLNLCVHLGASSPVS*GFRVVR
Trigger: TCGCACAACCCTGAAGCCCAAAGAAACTGGGCTGGA...TGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp GTCTCTGTGACCTCTGGGAAGGAGCATCCCCAAGAAATATCTGTCCAGTCACAGTGCCAGCTAATGATGTaGTCAATGTCCTTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: VSVTSGKEHPQEISVQSQCQLMM*SMSFCF
Trigger: AAAGCAAAAGGACATTGACAACATCATTAGCTGGCA...CTGTGACTGGACAGATATTTCTTGGGGATGCTCCTTCCCAGAGGTCACAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp ATGATTGCACTTTGTGGTCTGGTGGGCACACTCTTGCAGAAGCAGCTCACACTCTGCCAGCTAATGATGTaGTCAATGTCCTTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: MIALCGLVGTLLQKQLTLCQLMM*SMSFCF
Trigger: AAAGCAAAAGGACATTGACAACATCATTAGCTGGCA...GAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTGCAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000452649.1
CDS-3UTR CAA 90 bp AGCTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCAATTTTTGTCTCGGGGTaGCTCACATGGAGGACTGCT +
Preference number: 5 (lower is better)
Translates to: SYPATPHCDLNLCVHLGAIFVSG*LTWRTA
Trigger: AGCAGTCCTCCATGTGAGCAACCCCGAGACAAAAAT...TGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp TTCTCCCCGGCAGCTGACTTCCCTGAAGTGTTAAGTCCCAATCTTTCACCCTTTCTTGGGGACAGGATGTaGGATGAATTAATTAACGAA +
Preference number: 5 (lower is better)
Translates to: FSPAADFPEVLSPNLSPFLGDRM*DELINE
Trigger: TTCGTTAATTAATTCATCCAACATCCTGTCCCCAAG...AAAGGGTGAAAGATTGGGACTTAACACTTCAGGGAAGTCAGCTGCCGGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp TTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCCAGAAAGCAGACGTGTaGAACCCCTGTGATCGCCTA +
Preference number: 5 (lower is better)
Translates to: FLYSCVNCLLIVCVHSLVQKADV*NPCDRL
Trigger: TAGGCGATCACAGGGGTTCAACACGTCTGCTTTCTG...GACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp AGCTACCCTGCTACTCCTCATTGCGATCTAAACTTATGTGTTCATTTAGGAGCATCCCACTTAGCATTTTaGTCTCGGGGTTGCTCACAT +
Preference number: 5 (lower is better)
Translates to: SYPATPHCDLNLCVHLGASHLAF*SRGCSH
Trigger: ATGTGAGCAACCCCGAGACAAAAATGCTAAGTGGGA...TGCTCCTAAATGAACACATAAGTTTAGATCGCAATGAGGAGTAGCAGGGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615189.5
ENST00000617837.4
CDS-3UTR CAA 90 bp TGCCTAACTGAAATGAAAGCTCCTGAGGTCTGTCCTCCAGCCCAGTTTCTTTGGCATTTATTGAGTTTATaGCCAGTCTACATGTTCGCT +
Preference number: 5 (lower is better)
Translates to: CLTEMKAPEVCPPAQFLWHLLSL*PVYMFA
Trigger: AGCGAACATGTAGACTGGCAATAAACTCAATAAATG...CCAAAGAAACTGGGCTGGAGGACAGACCTCAGGAGCTTTCATTTCAGTTAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615189.5
CDS-3UTR CAA 90 bp AAACAAGTCTCCAAGGCTAGATTTCTTCATCTATACAAGGAGAGGATTGAACTGGTGAAGGCTGCACTTTaGAGCATCTGCTTACCTTGT +
Preference number: 5 (lower is better)
Translates to: KQVSKARFLHLYKERIELVKAAL*SICLPC
Trigger: ACAAGGTAAGCAGATGCTCAAAAGTGCAGCCTTCAC...CAGTTCAATCCTCTCCTTGTATAGATGAAGAAATCTAGCCTTGGAGACTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp TTTCCCATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCGTTGTCAATGTCCTTTaGCTTTCGGAACTCCACATG +
Preference number: 5 (lower is better)
Translates to: FPILIFLCKLPAHSLCPFVVNVL*LSELHM
Trigger: CATGTGGAGTTCCGAAAGCAAAAGGACATTGACAAC...GAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp AAATGTCTGTTTCCCATTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGATCTTGGATTTGCACTaGGGGTTTCCATCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: KCLFPILIFLCKLPAHSLILDLH*GFPSGS
Trigger: TGACCCTGATGGAAACCCCAAGTGCAAATCCAAGAT...CAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAATGGGAAACAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS-3UTR CAA 90 bp TTCTTATATTCTTGTGTAAACTGCCTGCTCATAGTCTGTGTCCATTCTTTGGTCCCCATTCTTATATTCTaGTGTAAACTGCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: FLYSCVNCLLIVCVHSLVPILIF*CKLPAH
Trigger: ATGAGCAGGCAGTTTACACAAGAATATAAGAATGGG...GACCAAAGAATGGACACAGACTATGAGCAGGCAGTTTACACAAGAATATAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405717.7
CDS GCA 72 bp GTCCTCGCCGCCACCCGGAGTAAAGTCCCAGCCTTTTaGCCGGGCCGCGGAGCTGGCAGCCAAGCCCCGCCT +
Preference number: 6 (lower is better)
Translates to: VLAATRSKVPAF*PGRGAGSQAPP
Trigger: AGGCGGGGCTTGGCTGCCAGCTCCGCGGCCCGGGCAAAAGGCTGGGACTTTACTCCGGGTGGCGGCGAGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428195.5
CDS GCA 72 bp GGGCAGGGTTTTGCCCAAGGTCGCACAGCGGCTTGGTaGCGGGGCAGGAGCTATCCAAGTCTCCCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: GQGFAQGRTAAW*RGRSYPSLPRS
Trigger: GCTCCTTGGGAGACTTGGATAGCTCCTGCCCCGGCACCAAGCCGCTGTGCGACCTTGGGCAAAACCCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429917.5
CDS GCA 72 bp CCATGGCATCGAGGAGCAAAGAGAAGGGCAGGGTTTTaGCCAAGGTCGCACAGCGGCTTGGTGCCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: PWHRGAKRRAGF*PRSHSGLVPGQ
Trigger: CTGCCCCGGCACCAAGCCGCTGTGCGACCTTGGGCAAAACCCTGCCCTTCTCTTTGCTCCTCGATGCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429917.5
CDS CCA 72 bp GAAGGGCAGGGTTTTGCCCAAGGTCGCACAGCGGCTTaGTGCCGGGGCAGGAGCTATCCAAGTCTCCCAAGG +
Preference number: 6 (lower is better)
Translates to: EGQGFAQGRTAA*CRGRSYPSLPR
Trigger: CCTTGGGAGACTTGGATAGCTCCTGCCCCGGCACCAAGCCGCTGTGCGACCTTGGGCAAAACCCTGCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429917.5
CDS GCA 72 bp CAGGTCGAAGCTTCTGGCTTGGCCAATGCCTCCTTCTaGCTGGGGCTCAGATCGCCGACTCTGCCGCTCATC +
Preference number: 6 (lower is better)
Translates to: QVEASGLANASF*LGLRSPTLPLI
Trigger: GATGAGCGGCAGAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGCCAAGCCAGAAGCTTCGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428195.5
ENST00000452649.1
ENST00000617837.4
CDS CCA 72 bp TCGAAGCTTCTGGCTTGGCCAATGCCTCCTTCTGCCTaGGGCTCAGATCGCCGACTCTGCCGCTCATCGTGG +
Preference number: 6 (lower is better)
Translates to: SKLLAWPMPPSA*GSDRRLCRSSW
Trigger: CCACGATGAGCGGCAGAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGCCAAGCCAGAAGCTTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428195.5
ENST00000452649.1
ENST00000617837.4
CDS CAA 72 bp AGAAGGGCAGGGTTTTGCCCAAGGTCGCACAGCGGCTaGGTGCCGGGGCAGGAGCTATCCAAGTCTCCCAAG +
Preference number: 6 (lower is better)
Translates to: RRAGFCPRSHSG*VPGQELSKSPK
Trigger: CTTGGGAGACTTGGATAGCTCCTGCCCCGGCACCAAGCCGCTGTGCGACCTTGGGCAAAACCCTGCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429917.5
CDS CAA 90 bp CCTCCTCATTCCATGGCATCGAGGAGCAAAGAGAAGGGCAGGGTTTaGCCCAAGGTCGCACAGCGGCTTGGTGCCGGGGCAGGAGCTATC +
Preference number: 6 (lower is better)
Translates to: PPHSMASRSKEKGRV*PKVAQRLGAGAGAI
Trigger: GATAGCTCCTGCCCCGGCACCAAGCCGCTGTGCGACCTTGGGCAAAACCCTGCCCTTCTCTTTGCTCCTCGATGCCATGGAATGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429917.5
CDS CCA 72 bp CATTCTCCCGAAACTTGGCCAATGCCTCCTTCTGCCTaGGGCTCAGATCGCCGACTCTGCCGCTCATCGTGG +
Preference number: 6 (lower is better)
Translates to: HSPETWPMPPSA*GSDRRLCRSSW
Trigger: CCACGATGAGCGGCAGAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402592.7
ENST00000405717.7
ENST00000416523.5
ENST00000437022.5
ENST00000615189.5
ENST00000619483.4
CDS GCA 72 bp TGGACATTCTCCCGAAACTTGGCCAATGCCTCCTTCTaGCTGGGGCTCAGATCGCCGACTCTGCCGCTCATC +
Preference number: 6 (lower is better)
Translates to: WTFSRNLANASF*LGLRSPTLPLI
Trigger: GATGAGCGGCAGAGTCGGCGATCTGAGCCCCAGGCAGAAGGAGGCATTGGCCAAGTTTCGGGAGAATGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402592.7
ENST00000405717.7
ENST00000416523.5
ENST00000437022.5
ENST00000615189.5
ENST00000619483.4
CDS CCA 72 bp CCAGGCAGGGGTCTGGGATGCAAGATAGGGGACGGCTaGTCTCAGCTCAAACTAACACCAACCCAGTGCCTC +
Preference number: 6 (lower is better)
Translates to: PGRGLGCKIGDG*SQLKLTPTQCL
Trigger: GAGGCACTGGGTTGGTGTTAGTTTGAGCTGAGACCAGCCGTCCCCTATCTTGCATCCCAGACCCCTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429917.5
ENST00000459728.5
CDS CAA 90 bp CCACATGCAGAGTTCTGTCATGTCACGTCTTGCAGCAGGCAGGTCTaGTCCTGCTCTTCCAGAGGAGGATCCTCGGAGCCAACGCAGGAG +
Preference number: 6 (lower is better)
Translates to: PHAEFCHVTSCSRQV*SCSSRGGSSEPTQE
Trigger: CTCCTGCGTTGGCTCCGAGGATCCTCCTCTGGAAGAGCAGGACAAGACCTGCCTGCTGCAAGACGTGACATGACAGAACTCTGCATGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484486.5
CDS CAA 72 bp GAGGACACAGCCAGGGAAGAGGATCTCATACTCCACTaGGTGGGAGGAGCCACGGGAAATCTGCACGCTGTG +
Preference number: 6 (lower is better)
Translates to: EDTAREEDLILH*VGGATGNLHAV
Trigger: CACAGCGTGCAGATTTCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGATCCTCTTCCCTGGCTGTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402592.7
ENST00000405717.7
ENST00000464335.5
ENST00000615189.5
ENST00000617837.4
ENST00000619483.4
ENST00000620251.1
CDS GCA 72 bp TTCCTCCCCAACTTTGTGGTCTGGTGGGCACACTCTTaGAGAAGCAGCTCACACTCCCGCATCTTGGTCCTC +
Preference number: 6 (lower is better)
Translates to: FLPNFVVWWAHS*RSSSHSRILVL
Trigger: GAGGACCAAGATGCGGGAGTGTGAGCTGCTTCTGCAAGAGTGTGCCCACCAGACCACAAAGTTGGGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405717.7
ENST00000428195.5
ENST00000459728.5
ENST00000464335.5
ENST00000615189.5
ENST00000617837.4
ENST00000619483.4
CDS CAA 72 bp GAGTTCTGTCATGTCACGTCTTGCAGCAGGCAGGTCTaGTCCTGCTCTTCCAGAGGAGGATCCTCGGAGCCA +
Preference number: 6 (lower is better)
Translates to: EFCHVTSCSRQV*SCSSRGGSSEP
Trigger: TGGCTCCGAGGATCCTCCTCTGGAAGAGCAGGACAAGACCTGCCTGCTGCAAGACGTGACATGACAGAACTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484486.5
CDS GCA 72 bp GCCAGGCCTGCTATAGGAGAAGGTGTTATTTCGGGGTaGCTGCCCCCAGCTGTTTCATCTTCTCTTCTGAGG +
Preference number: 6 (lower is better)
Translates to: ARPAIGEGVISG*LPPAVSSSLLR
Trigger: CCTCAGAAGAGAAGATGAAACAGCTGGGGGCAGGCACCCCGAAATAACACCTTCTCCTATAGCAGGCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000402592.7
ENST00000615189.5
ENST00000617837.4
ENST00000619483.4
ENST00000620251.1
CDS CCA 72 bp ACACAGCCAGGGAAGAGGATCTCATACTCCACTTGGTaGGAGGAGCCACGGGAAATCTGCACGCTGTGTTCA +
Preference number: 6 (lower is better)
Translates to: TQPGKRISYSTW*EEPREICTLCS
Trigger: TGAACACAGCGTGCAGATTTCCCGTGGCTCCTCCCACCAAGTGGAGTATGAGATCCTCTTCCCTGGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402592.7
ENST00000405717.7
ENST00000464335.5
ENST00000615189.5
ENST00000617837.4
ENST00000619483.4
ENST00000620251.1
CDS CCA 72 bp GAGCACACACTCTTTCCACCATGGTCTTCTGCCCCATaGAAGGATGAGGAGTTTGCTGGGGAGCAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: EHTLFPPWSSAP*KDEEFAGEQRE
Trigger: TTCCCTCTGCTCCCCAGCAAACTCCTCATCCTTCCATGGGGCAGAAGACCATGGTGGAAAGAGTGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415072.1
CDS TCA 72 bp GCACATCCTGGACATTCTCCCGAAACCGGGTCTGTCTaGGTCCAGAGCACACACTCTTTCCACCATGGTCTT +
Preference number: 6 (lower is better)
Translates to: AHPGHSPETGSV*VQSTHSFHHGL
Trigger: AAGACCATGGTGGAAAGAGTGTGTGCTCTGGACTCAGACAGACCCGGTTTCGGGAGAATGTCCAGGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415072.1
CDS CCA 72 bp CATTTGAGCCAGGCATCCCTGTTCACCTCTAGCCTCTaGCGGCTCATACCTTGGATTTGCACTTGGGGTTTC +
Preference number: 6 (lower is better)
Translates to: HLSQASLFTSSL*RLIPWICTWGF
Trigger: GAAACCCCAAGTGCAAATCCAAGGTATGAGCCGCCAGAGGCTAGAGGTGAACAGGGATGCCTGGCTCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619483.4
CDS CAA 90 bp AGAGGAACCTCACAGGCAGAAAGCTGGACATGGGGCTTCAAGGCATaGCCAAGGCAGAGATACTTACAGATGCCAGGATCACTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: RGTSQAESWTWGFKA*PRQRYLQMPGSLQV
Trigger: CACCTGCAGTGATCCTGGCATCTGTAAGTATCTCTGCCTTGGCAATGCCTTGAAGCCCCATGTCCAGCTTTCTGCCTGTGAGGTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405717.7
ENST00000464335.5
CDS CAA 90 bp TGGAGGCTCTGGAGGCTGCCAGCTAATGATGTTGTCAATGTCCTTTaGCTTTCGGAACTCCACATGCTTCCGGAGCATGGCCTCCGACTT +
Preference number: 6 (lower is better)
Translates to: WRLWRLPANDVVNVL*LSELHMLPEHGLRL
Trigger: AAGTCGGAGGCCATGCTCCGGAAGCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAACATCATTAGCTGGCAGCCTCCAGAGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000619483.4
CDS CAA 90 bp CAGCAGGTCCTGTTTGGAGGCTCTGGAGGCTGCCAGCTAATGATGTaGTCAATGTCCTTTTGCTTTCGGAACTCCACATGCTTCCGGAGC +
Preference number: 6 (lower is better)
Translates to: QQVLFGGSGGCQLMM*SMSFCFRNSTCFRS
Trigger: GCTCCGGAAGCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAACATCATTAGCTGGCAGCCTCCAGAGCCTCCAAACAGGACCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437022.5
ENST00000619483.4
CDS TCA 72 bp GCTTCTTGCCTTCTGAGGAGCATAAACCTTAAGTCCTaGACCAGGCAGGGGTCTGGGATGCAAGATAGGGGA +
Preference number: 6 (lower is better)
Translates to: ASCLLRSINLKS*TRQGSGMQDRG
Trigger: TCCCCTATCTTGCATCCCAGACCCCTGCCTGGTTCAGGACTTAAGGTTTATGCTCCTCAGAAGGCAAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429917.5
CDS GCA 72 bp GGAGGCTGCCAGCTAATGATGTTGTCAATGTCCTTTTaGTTTCGGAACTCCACATGCTTCCGGAGCATGGCC +
Preference number: 6 (lower is better)
Translates to: GGCQLMMLSMSF*FRNSTCFRSMA
Trigger: GGCCATGCTCCGGAAGCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAACATCATTAGCTGGCAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000405717.7
ENST00000415072.1
ENST00000416523.5
ENST00000428195.5
ENST00000429917.5
ENST00000437022.5
ENST00000452649.1
ENST00000459728.5
ENST00000464335.5
ENST00000615189.5
ENST00000619483.4
CDS GCA 72 bp CACAGGCAGAAAGCTGGACATGGGGCTTCAAGGCATTaGCAAGGCAGAGATACTTACAGATGCCAGGATCAC +
Preference number: 6 (lower is better)
Translates to: HRQKAGHGASRH*QGRDTYRCQDH
Trigger: GTGATCCTGGCATCTGTAAGTATCTCTGCCTTGGCAATGCCTTGAAGCCCCATGTCCAGCTTTCTGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405717.7
ENST00000464335.5
CDS CCA 72 bp CCTGGGGATGTCACCCCCGTAGTTGATCTAGAAGCATaGCATGGAGTGAACTGGAATGTGCATTTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: PGDVTPVVDLEA*HGVNWNVHLSQ
Trigger: CTGGCTCAAATGCACATTCCAGTTCACTCCATGCCATGCTTCTAGATCAACTACGGGGGTGACATCCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619483.4
CDS CAA 72 bp CTAGAAGCATGGCATGGAGTGAACTGGAATGTGCATTaGAGCCAGGCATCCCTGTTCACCTCTAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: LEAWHGVNWNVH*SQASLFTSSLW
Trigger: CCAGAGGCTAGAGGTGAACAGGGATGCCTGGCTCAAATGCACATTCCAGTTCACTCCATGCCATGCTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619483.4
CDS CAA 90 bp GATCACCTCTGGAGGCTGCCAGCTAATGATGTTGTCAATGTCCTTTaGCTTTCGGAACTCCACATGCTTCCGGAGCATGGCCTCCGACTT +
Preference number: 6 (lower is better)
Translates to: DHLWRLPANDVVNVL*LSELHMLPEHGLRL
Trigger: AAGTCGGAGGCCATGCTCCGGAAGCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAACATCATTAGCTGGCAGCCTCCAGAGGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000405717.7
ENST00000415072.1
ENST00000416523.5
ENST00000428195.5
ENST00000429917.5
ENST00000452649.1
ENST00000459728.5
ENST00000464335.5
ENST00000615189.5
CDS CAA 90 bp GTAGTTGATCTAGAAGCATGGCATGGAGTGAACTGGAATGTGCATTaGAGCCAGGCATCCCTGTTCACCTCTAGCCTCTGGCGGCTCATA +
Preference number: 6 (lower is better)
Translates to: VVDLEAWHGVNWNVH*SQASLFTSSLWRLI
Trigger: TATGAGCCGCCAGAGGCTAGAGGTGAACAGGGATGCCTGGCTCAAATGCACATTCCAGTTCACTCCATGCCATGCTTCTAGATCAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619483.4
CDS TCA 72 bp ACTTCTTGCCTTCTGAGGAGCATAAACCTTAAGTCCTaGACCAGGCAGGGGTCTGGGATGCAAGATAGGGGA +
Preference number: 6 (lower is better)
Translates to: TSCLLRSINLKS*TRQGSGMQDRG
Trigger: TCCCCTATCTTGCATCCCAGACCCCTGCCTGGTTCAGGACTTAAGGTTTATGCTCCTCAGAAGGCAAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459728.5
CDS CAA 72 bp TGGAGGCTGCCAGCTAATGATGTTGTCAATGTCCTTTaGCTTTCGGAACTCCACATGCTTCCGGAGCATGGC +
Preference number: 6 (lower is better)
Translates to: WRLPANDVVNVL*LSELHMLPEHG
Trigger: GCCATGCTCCGGAAGCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAACATCATTAGCTGGCAGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000405717.7
ENST00000415072.1
ENST00000416523.5
ENST00000428195.5
ENST00000429917.5
ENST00000437022.5
ENST00000452649.1
ENST00000459728.5
ENST00000464335.5
ENST00000615189.5
ENST00000619483.4
CDS CAA 90 bp GACAGATACTGTTGGATCACCTCTGGAGGCTGCCAGCTAATGATGTaGTCAATGTCCTTTTGCTTTCGGAACTCCACATGCTTCCGGAGC +
Preference number: 6 (lower is better)
Translates to: DRYCWITSGGCQLMM*SMSFCFRNSTCFRS
Trigger: GCTCCGGAAGCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAACATCATTAGCTGGCAGCCTCCAGAGGTGATCCAACAGTATCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000405717.7
ENST00000415072.1
ENST00000416523.5
ENST00000428195.5
ENST00000429917.5
ENST00000452649.1
ENST00000459728.5
ENST00000464335.5
ENST00000615189.5
CDS TCA 72 bp GCACATAATACTTCCTGGGGATGTCACCCCCGTAGTTaGTCTAGAAGCATGGCATGGAGTGAACTGGAATGT +
Preference number: 6 (lower is better)
Translates to: AHNTSWGCHPRS*SRSMAWSELEC
Trigger: ACATTCCAGTTCACTCCATGCCATGCTTCTAGATCAACTACGGGGGTGACATCCCCAGGAAGTATTATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619483.4
CDS CAA 72 bp TGTTGGATCACCTCTGGAGGCTGCCAGCTAATGATGTaGTCAATGTCCTTTTGCTTTCGGAACTCCACATGC +
Preference number: 6 (lower is better)
Translates to: CWITSGGCQLMM*SMSFCFRNSTC
Trigger: GCATGTGGAGTTCCGAAAGCAAAAGGACATTGACAACATCATTAGCTGGCAGCCTCCAGAGGTGATCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000405717.7
ENST00000415072.1
ENST00000416523.5
ENST00000428195.5
ENST00000429917.5
ENST00000452649.1
ENST00000459728.5
ENST00000464335.5
ENST00000615189.5
CDS GCA 72 bp CAGGCTGAATTTGACCCTCATGCCAGTAGAAATGTGTaGATTTCAACACCACATGCAGAGTTCTGTCATGTC +
Preference number: 6 (lower is better)
Translates to: QAEFDPHASRNV*ISTPHAEFCHV
Trigger: GACATGACAGAACTCTGCATGTGGTGTTGAAATGCACACATTTCTACTGGCATGAGGGTCAAATTCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484486.5
ENST00000485482.5
CDS TCA 72 bp CTAGATTTCTTCATCTATACAAGGAGAGGATTGAACTaGTGGCATTCCACTTCTAGTTCTAACACTCAGAGC +
Preference number: 6 (lower is better)
Translates to: LDFFIYTRRGLN*WHSTSSSNTQS
Trigger: GCTCTGAGTGTTAGAACTAGAAGTGGAATGCCATCAGTTCAATCCTCTCCTTGTATAGATGAAGAAATCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405717.7
ENST00000464335.5