Pregenerated sensors for SEC11C (Homo sapiens)
Ensembl gene IDs: ENSG00000166562Ensembl transcript IDs: ENST00000299714.7, ENST00000509791.7, ENST00000585864.1, ENST00000587834.6, ENST00000588875.2, ENST00000592774.1, ENST00000593132.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAACACACATCTGTACCAGCCCAGAGAGTACCTACAGCATTCCCTaGAATGTTAAACAGTGGTTATCTCTGGGAGACTTTCTTGTAATG | + |
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Preference number: 1 (lower is better) Translates to: ITHICTSPESTYSIP*NVKQWLSLGDFLVM Trigger: CATTACAAGAAAGTCTCCCAGAGATAACCACTGTTTAACATTTCAGGGAATGCTGTAGGTACTCTCTGGGCTGGTACAGATGTGTGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR CCA 90 bp | AGCCAACGATTATGCTCACAAAATCAACAGCAATATGTAATCAGATaGACCCAGGTCTCAATCATCTCTGCTCATGGGAAACAAGGTAAC | + |
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Preference number: 1 (lower is better) Translates to: SQRLCSQNQQQYVIR*TQVSIISAHGKQGN Trigger: GTTACCTTGTTTCCCATGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTTTGTGAGCATAATCGTTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR CCA 90 bp | GTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAAGACAGGCTAAACCTGACAAAATaGGAGCCAGTCTCTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: VPSSLLSKAFHQSVWKDRLNLTK*EPVSPA Trigger: GGCTGGAGAGACTGGCTCCCATTTTGTCAGGTTTAG...CCTGTCTTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR CCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCAACAGGATGGACTAACTaGAAGCCCTCCTGGTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: KSTAICNQMDPGLNHLCSTGWTN*KPSWSP Trigger: GGGGGACCAGGAGGGCTTCCAGTTAGTCCATCCTGT...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR CCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCATCTGGAAAGACAGGATaGACTAACTGGAAGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: KSTAICNQMDPGLNHLCSSGKTG*TNWKPS Trigger: GGAGGGCTTCCAGTTAGTCCATCCTGTCTTTCCAGA...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR TCA 90 bp | GTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAAGACAGGCCGGAGATGTTCAAGTaGAAATGCAACAAAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: VPSSLLSKAFHQSVWKDRPEMFK*KCNKEK Trigger: TTTTTCTTTGTTGCATTTTCACTTGAACATCTCCGG...CCTGTCTTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR CCA 90 bp | TTATGTCAATCAGAAGCAGAACTCATTGCTGGACAACTATACAAAGATGAATACTTACTCAGGCTGGTCTaGAACTCCTGGGCTCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LCQSEAELIAGQLYKDEYLLRLV*NSWAQV Trigger: CACTTGAGCCCAGGAGTTCCAGACCAGCCTGAGTAA...GTATTCATCTTTGTATAGTTGTCCAGCAATGAGTTCTGCTTCTGATTGACATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGTAGTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAAAGAAGCAGAACTCATTaGTGGACAACTATACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SVVPSSLLSKAFHQSVWKRSRTH*WTTIQR Trigger: TCTTTGTATAGTTGTCCAGCAATGAGTTCTGCTTCT...TTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAACTACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR TCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCAACCTACAGCATTCCCTaGAATGTTAAACAGTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: KSTAICNQMDPGLNHLCSTYSIP*NVKQWL Trigger: TAACCACTGTTTAACATTTCAGGGAATGCTGTAGGT...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR CCA 90 bp | CGCAATAAAACAGCTTGTAGCCACTTAAAAAGATACAGATGTAGATTTGACACGGCCACTGCGCCTGGCTaGATTTATTTTGAAACAGAT | + |
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Preference number: 2 (lower is better) Translates to: RNKTACSHLKRYRCRFDTATAPG*IYFETD Trigger: ATCTGTTTCAAAATAAATCCAGCCAGGCGCAGTGGC...CGTGTCAAATCTACATCTGTATCTTTTTAAGTGGCTACAAGCTGTTTTATTGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR TCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCATGGCTGGATTTATTTTaGAACAGATTTGAACCCATC | + |
|
Preference number: 2 (lower is better) Translates to: KSTAICNQMDPGLNHLCSWLDLF*NRFEPI Trigger: GATGGGTTCAAATCTGTTTCAAAATAAATCCAGCCA...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCTTTTGAATTCATTTCAATCTaGTCCCAGGAACTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LVNLLFGQDKNISTLFPFEFISI*SQELLL Trigger: GAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTC...AAAAGGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| 3UTR CCA 72 bp | GCTCTTCCCACCACGTCCTTCTTTTCCAGCCAGTTCTaGCCTTCTTTGTACAAGCCTCTATCATCAACTTCA | + |
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Preference number: 3 (lower is better) Translates to: ALPTTSFFSSQF*PSLYKPLSSTS Trigger: TGAAGTTGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTGGCTGGAAAAGAAGGACGTGGTGGGAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299714.7 |
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| 3UTR TCA 72 bp | ATCTGTACCAGCCCAGAGAGTACCTACAGCATTCCCTaGAATGTTAAACAGTGGTTATCTCTGGGAGACTTT | + |
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Preference number: 3 (lower is better) Translates to: ICTSPESTYSIP*NVKQWLSLGDF Trigger: AAAGTCTCCCAGAGATAACCACTGTTTAACATTTCAGGGAATGCTGTAGGTACTCTCTGGGCTGGTACAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| 3UTR-3UTR CAA 90 bp | TTTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCCAGTTCTGGCCTTCTTaGTACAAGCCTCTATCATCA | + |
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Preference number: 3 (lower is better) Translates to: FTGESFIWTRQKHLHTVPQFWPS*YKPLSS Trigger: TGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTG...GGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299714.7 |
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| 3UTR CCA 72 bp | TTATGCTCACAAAATCAACAGCAATATGTAATCAGATaGACCCAGGTCTCAATCATCTCTGCTCATGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LCSQNQQQYVIR*TQVSIISAHGK Trigger: TTTCCCATGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTTTGTGAGCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR GCA 90 bp | CAGCCAGTTCTGGCCTTCTTTGTACAAGCCTCTATCATCAACTTCATTATTATCGGTGGCACAGACGGCTaGGGAGCACCTGCCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QPVLAFFVQASIINFIIIGGTDG*GAPAGP Trigger: GGGGCCGGCAGGTGCTCCGCAGCCGTCTGTGCCACC...GATAATAATGAAGTTGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299714.7 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGCCAGTTCTGGCCTTCTTTGTACAAGCCTCTATCATCAACTTCATTACCCGCCGGCTCTGGGTaGCACAGACGGCTGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FSSQFWPSLYKPLSSTSLPAGSG*HRRLRS Trigger: GCTCCGCAGCCGTCTGTGCCACCCAGAGCCGGCGGG...TAATGAAGTTGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTGGCTGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299714.7 |
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| CDS-3UTR CCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCACCCGCCGGCTCTGGGTaGCACAGACGGCTGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KSTAICNQMDPGLNHLCSPAGSG*HRRLRS Trigger: GCTCCGCAGCCGTCTGTGCCACCCAGAGCCGGCGGG...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CCA 90 bp | TTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCTCCCGCCGGCTCTGGGTaGCACAGACGGCTGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLVNLLFGQDKNISTLFPPAGSG*HRRLRS Trigger: GCTCCGCAGCCGTCTGTGCCACCCAGAGCCGGCGGG...AGGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299714.7 ENST00000587834.6 |
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| CDS-3UTR GCA 90 bp | TTATGTCAATCAGAAGCAGAACTCATTGCTGGACAACTATACAAAGATGAATACGGTGGCACAGACGGCTaGGGAGCACCTGCCGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCQSEAELIAGQLYKDEYGGTDG*GAPAGP Trigger: GGGGCCGGCAGGTGCTCCGCAGCCGTCTGTGCCACC...GTATTCATCTTTGTATAGTTGTCCAGCAATGAGTTCTGCTTCTGATTGACATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR TCA 90 bp | CTTTTCCAGCCAGTTCTGGCCTTCTTTGTACAAGCCTCTATCATCAACTTCATTAGGAGGTCTCCTCTGTaGAAGGCCGGCTCCATACTG | + |
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Preference number: 4 (lower is better) Translates to: LFQPVLAFFVQASIINFIRRSPL*KAGSIL Trigger: CAGTATGGAGCCGGCCTTTCACAGAGGAGACCTCCT...AATGAAGTTGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTGGCTGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299714.7 |
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| CDS-3UTR TCA 90 bp | GTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAAGACAGGCTATTTCACCAGCTCTaGTTGGGTCTTCCCGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: VPSSLLSKAFHQSVWKDRLFHQL*LGLPGN Trigger: ATTTCCGGGAAGACCCAATCAGAGCTGGTGAAATAG...CCTGTCTTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CCA 90 bp | TCAGTAGTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAATTACTCAGGCTGGTCTaGAACTCCTGGGCTCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVVPSSLLSKAFHQSVWKLLRLV*NSWAQV Trigger: CACTTGAGCCCAGGAGTTCCAGACCAGCCTGAGTAA...TTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAACTACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR TCA 90 bp | GTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAAGACAGGAGCCTTTCCATATCATaGGTGCAGAAGACACGATCA | + |
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Preference number: 4 (lower is better) Translates to: VPSSLLSKAFHQSVWKDRSLSIS*VQKTRS Trigger: TGATCGTGTCTTCTGCACTCATGATATGGAAAGGCT...CCTGTCTTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CCA 90 bp | TCAGTAGTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAACTAAACCTGACAAAATaGGAGCCAGTCTCTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SVVPSSLLSKAFHQSVWKLNLTK*EPVSPA Trigger: GGCTGGAGAGACTGGCTCCCATTTTGTCAGGTTTAG...TTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAACTACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CCA 90 bp | TCAGTAGTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAATCTGGAAAGACAGGATaGACTAACTGGAAGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SVVPSSLLSKAFHQSVWKSGKTG*TNWKPS Trigger: GGAGGGCTTCCAGTTAGTCCATCCTGTCTTTCCAGA...TTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAACTACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR TCA 90 bp | TTTTTCAACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTTAGGGGCTCTCACTGCCTGTaGGCACGATCAAGCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FFNRIHFNLVPGTASHFRGSHCL*ARSSLS Trigger: GGAAAGGCTTGATCGTGCTCACAGGCAGTGAGAGCC...CCTAAAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGTTGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000299714.7 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | TTTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCAGGAGGTCTCCTCTGTaGAAGGCCGGCTCCATACTG | + |
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Preference number: 4 (lower is better) Translates to: FTGESFIWTRQKHLHTVPRRSPL*KAGSIL Trigger: CAGTATGGAGCCGGCCTTTCACAGAGGAGACCTCCT...GGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCTTTTTCAACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATAGGAGGTCTCCTCTGTaGAAGGCCGGCTCCATACTG | + |
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Preference number: 4 (lower is better) Translates to: FLFFNRIHFNLVPGTASHRRSPL*KAGSIL Trigger: CAGTATGGAGCCGGCCTTTCACAGAGGAGACCTCCT...ATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGTTGAAAAAGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCACTTCCCGGAAATTTGTaGGGAACAGGAGGTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KSTAICNQMDPGLNHLCSLPGNL*GTGGLL Trigger: GAGGAGACCTCCTGTTCCTCACAAATTTCCGGGAAG...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR TCA 90 bp | TTATGTCAATCAGAAGCAGAACTCATTGCTGGACAACTATACAAAGATGAATACAGGAGGTCTCCTCTGTaGAAGGCCGGCTCCATACTG | + |
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Preference number: 4 (lower is better) Translates to: LCQSEAELIAGQLYKDEYRRSPL*KAGSIL Trigger: CAGTATGGAGCCGGCCTTTCACAGAGGAGACCTCCT...GTATTCATCTTTGTATAGTTGTCCAGCAATGAGTTCTGCTTCTGATTGACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR TCA 90 bp | AGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTTAGGATTCACGTTCTTCCCGGAAATTTGTaGGGAACAGGAGGTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RIHFNLVPGTASHFRIHVLPGNL*GTGGLL Trigger: GAGGAGACCTCCTGTTCCTCACAAATTTCCGGGAAG...AACGTGAATCCTAAAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299714.7 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCTTTTTCAACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATCTTCCCGGAAATTTGTaGGGAACAGGAGGTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FLFFNRIHFNLVPGTASHLPGNL*GTGGLL Trigger: GAGGAGACCTCCTGTTCCTCACAAATTTCCGGGAAG...ATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGTTGAAAAAGAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | CAGCCAGTTCTGGCCTTCTTTGTACAAGCCTCTATCATCAACTTCATTATTATCCCATTATCTCAGCTCTaGTTGGGTCTTCCCGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: QPVLAFFVQASIINFIIIPLSQL*LGLPGN Trigger: ATTTCCGGGAAGACCCAATCAGAGCTGAGATAATGG...GATAATAATGAAGTTGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299714.7 |
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| CDS-3UTR TCA 90 bp | GTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAAGACAGGTGGCTGGATTTATTTTaGAACAGATTTGAACCCATC | + |
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Preference number: 4 (lower is better) Translates to: VPSSLLSKAFHQSVWKDRWLDLF*NRFEPI Trigger: GATGGGTTCAAATCTGTTTCAAAATAAATCCAGCCA...CCTGTCTTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR GCA 90 bp | TCAGTAGTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAATTTCCATATCATGAGTaGAGAAGACACGATCATGGC | + |
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Preference number: 4 (lower is better) Translates to: SVVPSSLLSKAFHQSVWKFPYHE*RRHDHG Trigger: GCCATGATCGTGTCTTCTGCACTCATGATATGGAAA...TTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAACTACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR GCA 90 bp | CGCAATAAAACAGCTTGTAGCCACTTAAAAAGATACAGATGTAGATTTGACACGGAATCCTCACCCTCTTaGTCTTCCCACCACGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RNKTACSHLKRYRCRFDTESSPS*SSHHVL Trigger: AAGGACGTGGTGGGAAGAGCAAGAGGGTGAGGATTC...CGTGTCAAATCTACATCTGTATCTTTTTAAGTGGCTACAAGCTGTTTTATTGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR GCA 90 bp | GTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAAGACAGGAGAAGCAGAACTCATTaGTGGACAACTATACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: VPSSLLSKAFHQSVWKDRRSRTH*WTTIQR Trigger: TCTTTGTATAGTTGTCCAGCAATGAGTTCTGCTTCT...CCTGTCTTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CCA 90 bp | TCAGTAGTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAACAGAAGACACGATCATaGCGAAGTTTAAAACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SVVPSSLLSKAFHQSVWKQKTRS*RSLKPG Trigger: ACCAGGTTTTAAACTTCGCCATGATCGTGTCTTCTG...TTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAACTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR GCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCAAGCAAGGAGGTTCAGTaGATAAACCAGCCAACGATT | + |
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Preference number: 4 (lower is better) Translates to: KSTAICNQMDPGLNHLCSSKEVQ*INQPTI Trigger: AATCGTTGGCTGGTTTATGCACTGAACCTCCTTGCT...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CCA 90 bp | CTTTTCCAGCCAGTTCTGGCCTTCTTTGTACAAGCCTCTATCATCAACTTCATTCAGAAGACACGATCATaGCGAAGTTTAAAACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LFQPVLAFFVQASIINFIQKTRS*RSLKPG Trigger: ACCAGGTTTTAAACTTCGCCATGATCGTGTCTTCTG...AATGAAGTTGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTGGCTGGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299714.7 |
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| CDS-3UTR CCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCATTTTCCAGCCAGTTCTaGCCTTCTTTGTACAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KSTAICNQMDPGLNHLCSFSSQF*PSLYKP Trigger: AGGCTTGTACAAAGAAGGCCAGAACTGGCTGGAAAA...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR TCA 90 bp | TTTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCCTATTTCACCAGCTCTaGTTGGGTCTTCCCGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: FTGESFIWTRQKHLHTVPLFHQL*LGLPGN Trigger: ATTTCCGGGAAGACCCAATCAGAGCTGGTGAAATAG...GGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR GCA 90 bp | TTTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCAAAGAGCATACCTCTTaGTCTTCCCACCACGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FTGESFIWTRQKHLHTVPKEHTS*SSHHVL Trigger: AAGGACGTGGTGGGAAGAGCAAGAGGTATGCTCTTT...GGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588875.2 |
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| CDS-3UTR CCA 90 bp | GAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTTAGGATTCACGTTTTTTTCCAGCCAGTTCTaGCCTTCTTTGTACAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EFISIWSQELLLILGFTFFSSQF*PSLYKP Trigger: AGGCTTGTACAAAGAAGGCCAGAACTGGCTGGAAAA...AAACGTGAATCCTAAAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTC 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000299714.7 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | TCTCTTTTTCAACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTAGCCTTTCCATATCATaGGTGCAGAAGACACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLFQQNSFQSGPRNCFSFSLSIS*VQKTRS Trigger: TGATCGTGTCTTCTGCACTCATGATATGGAAAGGCT...AAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGTTGAAAAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299714.7 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | TTTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCAGCCTTTCCATATCATaGGTGCAGAAGACACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FTGESFIWTRQKHLHTVPSLSIS*VQKTRS Trigger: TGATCGTGTCTTCTGCACTCATGATATGGAAAGGCT...GGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | ATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTTAGGATTCACGTTTTAAGCCTTTCCATATCATaGGTGCAGAAGACACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: IHFNLVPGTASHFRIHVLSLSIS*VQKTRS Trigger: TGATCGTGTCTTCTGCACTCATGATATGGAAAGGCT...TAAAACGTGAATCCTAAAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299714.7 ENST00000588875.2 |
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| CDS-3UTR CCA 90 bp | GAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTTAGGATTCACGTTTTATCTCAGCTCTGATTaGGTCTTCCCGGAAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFISIWSQELLLILGFTFYLSSD*VFPEIC Trigger: ACAAATTTCCGGGAAGACCCAATCAGAGCTGAGATA...AAACGTGAATCCTAAAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299714.7 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTTTTCAACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTTTCCAGCCAGTTCTaGCCTTCTTTGTACAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLFFNRIHFNLVPGTASHFSSQF*PSLYKP Trigger: AGGCTTGTACAAAGAAGGCCAGAACTGGCTGGAAAA...ATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGTTGAAAAAGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR CCA 90 bp | TTTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCTTCACCAGCTCTGATTaGGTCTTCCCGGAAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTGESFIWTRQKHLHTVPFTSSD*VFPEIC Trigger: ACAAATTTCCGGGAAGACCCAATCAGAGCTGGTGAA...GGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR CCA 90 bp | GTTGCCAAGAGAGGGGAAGAATTCCCTTGTTTGGTTTTTAATGAGGATACATTCTACTCTGTGAACTATTaGAATGTCTCGTCCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VAKRGEEFPCLVFNEDTFYSVNY*NVSSFN Trigger: GTTGAAGGACGAGACATTCCAATAGTTCACAGAGTA...GAATGTATCCTCATTAAAAACCAAACAAGGGAATTCTTCCCCTCTCTTGGCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCACAATATGTAATCAGATaGACCCAGGTCTCAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: KSTAICNQMDPGLNHLCSQYVIR*TQVSII Trigger: GATGATTGAGACCTGGGTCCATCTGATTACATATTG...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR TCA 90 bp | AAATCAACAGCAATATGTAATCAGATGGACCCAGGTCTCAATCATCTCTGCTCACCGGAGATGTTCAAGTaGAAATGCAACAAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSTAICNQMDPGLNHLCSPEMFK*KCNKEK Trigger: TTTTTCTTTGTTGCATTTTCACTTGAACATCTCCGG...TGAGCAGAGATGATTGAGACCTGGGTCCATCTGATTACATATTGCTGTTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR GCA 90 bp | TTTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCTTTCCATATCATGAGTaGAGAAGACACGATCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTGESFIWTRQKHLHTVPFPYHE*RRHDHG Trigger: GCCATGATCGTGTCTTCTGCACTCATGATATGGAAA...GGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR GCA 90 bp | TTTCTCTTTTTCAACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTTCCATATCATGAGTaGAGAAGACACGATCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFFNRIHFNLVPGTASHFPYHE*RRHDHG Trigger: GCCATGATCGTGTCTTCTGCACTCATGATATGGAAA...ATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGTTGAAAAAGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR CCA 90 bp | TTTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCGAATTCATTTCAATCTaGTCCCAGGAACTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTGESFIWTRQKHLHTVPEFISI*SQELLL Trigger: GAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTC...GGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTTTTCAACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTGAATTCATTTCAATCTaGTCCCAGGAACTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLFQQNSFQSGPRNCFSFEFISI*SQELLL Trigger: GAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTC...AAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGTTGAAAAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299714.7 ENST00000588875.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTCAATCAGAAGCAGAACTCATTGCTGGACAACTATACAAAGATGAATACTTCACCAGCTCTGATTaGGTCTTCCCGGAAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCQSEAELIAGQLYKDEYFTSSD*VFPEIC Trigger: ACAAATTTCCGGGAAGACCCAATCAGAGCTGGTGAA...GTATTCATCTTTGTATAGTTGTCCAGCAATGAGTTCTGCTTCTGATTGACATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR TCA 90 bp | CGCAATAAAACAGCTTGTAGCCACTTAAAAAGATACAGATGTAGATTTGACACGACCTACAGCATTCCCTaGAATGTTAAACAGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RNKTACSHLKRYRCRFDTTYSIP*NVKQWL Trigger: TAACCACTGTTTAACATTTCAGGGAATGCTGTAGGT...CGTGTCAAATCTACATCTGTATCTTTTTAAGTGGCTACAAGCTGTTTTATTGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CCA 90 bp | TTTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCTACTCTGTGAACTATTaGAATGTCTCGTCCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTGESFIWTRQKHLHTVPYSVNY*NVSSFN Trigger: GTTGAAGGACGAGACATTCCAATAGTTCACAGAGTA...GGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | CTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCTTTTACTTTGATTACTCTGTaGACTATTGGAATGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVNLLFGQDKNISTLFPFTLITL*TIGMSR Trigger: ACGAGACATTCCAATAGTTCACAGAGTAATCAAAGT...AAAAGGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR TCA 90 bp | TTACTGGTGAATCTTTTATTTGGACAAGACAAAAACATCTCCACACTGTTCCCTACTTTGATTACTCTGTaGACTATTGGAATGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVNLLFGQDKNISTLFPTLITL*TIGMSR Trigger: ACGAGACATTCCAATAGTTCACAGAGTAATCAAAGT...AGGGAACAGTGTGGAGATGTTTTTGTCTTGTCCAAATAAAAGATTCACCAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR GCA 90 bp | TTATGTCAATCAGAAGCAGAACTCATTGCTGGACAACTATACAAAGATGAATACACCAGCCAACGATTATaGTCACAAAATCAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCQSEAELIAGQLYKDEYTSQRL*SQNQQQ Trigger: TTGCTGTTGATTTTGTGAGCATAATCGTTGGCTGGT...GTATTCATCTTTGTATAGTTGTCCAGCAATGAGTTCTGCTTCTGATTGACATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR TCA 90 bp | TTATGTCAATCAGAAGCAGAACTCATTGCTGGACAACTATACAAAGATGAATACACTTTGATTACTCTGTaGACTATTGGAATGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LCQSEAELIAGQLYKDEYTLITL*TIGMSR Trigger: ACGAGACATTCCAATAGTTCACAGAGTAATCAAAGT...GTATTCATCTTTGTATAGTTGTCCAGCAATGAGTTCTGCTTCTGATTGACATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS CCA 90 bp | ACGCACCATAGCAGGGTCTCCGGGGACCTAGCGGCCCGCCGGCTCTaGGTGGCACAGACGGCTGCGGAGCACCTGCCGGCCCCCGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: THHSRVSGDLAARRL*VAQTAAEHLPAPAH Trigger: GTGGGCGGGGGCCGGCAGGTGCTCCGCAGCCGTCTGTGCCACCCAGAGCCGGCGGGCCGCTAGGTCCCCGGAGACCCTGCTATGGTGCGT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS TCA 90 bp | CTGGCAGCTTTTCCTCCAGAGATTTCTGTTCCCCTCTCCAGGGAATaGACTCCCAGACCTCTGCTGAGGAGGGTGAGGCCTCTGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAAFPPEISVPLSRE*TPRPLLRRVRPLGG Trigger: TCCACCCAGAGGCCTCACCCTCCTCAGCAGAGGTCTGGGAGTTCATTCCCTGGAGAGGGGAACAGAAATCTCTGGAGGAAAAGCTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS CCA 90 bp | GGAATGAACTCCCAGACCTCTGCTGAGGAGGGTGAGGCCTCTGGGTaGAAGACAAGGAGAGCGAGGGGTCTCACTGCTTCTCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GMNSQTSAEEGEASG*KTRRARGLTASLLF Trigger: GAAAAGCAGAGAAGCAGTGAGACCCCTCGCTCTCCTTGTCTTCCACCCAGAGGCCTCACCCTCCTCAGCAGAGGTCTGGGAGTTCATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS TCA 90 bp | ATTGGGTCTTCCCGGAAATTTGTGAGGAACAGGAGGTCTCCTCTGTaGAAGGCCGGCTCCATACTGCCACTCAGCACCACCACGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IGSSRKFVRNRRSPL*KAGSILPLSTTTMG Trigger: CCCCATCGTGGTGGTGCTGAGTGGCAGTATGGAGCCGGCCTTTCACAGAGGAGACCTCCTGTTCCTCACAAATTTCCGGGAAGACCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000299714.7 ENST00000509791.7 ENST00000585864.1 ENST00000587834.6 ENST00000588875.2 |
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| CDS GCA 90 bp | ACAGCAGCAGCGCAAGCATCAGCGTGCACTAGGATCAGCTGGCGATaGCTGAGGACTGCACTTCAGACACATTCCCAGGTGACACGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAAAQASACTRISWR*LRTALQTHSQVTRK Trigger: CTTTCGTGTCACCTGGGAATGTGTCTGAAGTGCAGTCCTCAGGCATCGCCAGCTGATCCTAGTGCACGCTGATGCTTGCGCTGCTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS GCA 90 bp | TCAGTGTCCGGACAGTTCTTTACAGCAGCAGCGCAAGCATCAGCGTaGACTAGGATCAGCTGGCGATGCCTGAGGACTGCACTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SVSGQFFTAAAQASA*TRISWRCLRTALQT Trigger: TGTCTGAAGTGCAGTCCTCAGGCATCGCCAGCTGATCCTAGTGCACGCTGATGCTTGCGCTGCTGCTGTAAAGAACTGTCCGGACACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS CCA 90 bp | CACAAACCTGAAGAGCCACAGCCTCCCCCAGTGCCGCTCACATCCTaGCTTTCTCTGGCTGTGCCAGTTCCCATTCTTCCATCTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKPEEPQPPPVPLTS*LSLAVPVPILPSVF Trigger: GAAAACAGATGGAAGAATGGGAACTGGCACAGCCAGAGAAAGCCAGGATGTGAGCGGCACTGGGGGAGGCTGTGGCTCTTCAGGTTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS CCA 90 bp | TTCTTTACAGCAGCAGCGCAAGCATCAGCGTGCACTAGGATCAGCTaGCGATGCCTGAGGACTGCACTTCAGACACATTCCCAGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FFTAAAQASACTRIS*RCLRTALQTHSQVT Trigger: TGTCACCTGGGAATGTGTCTGAAGTGCAGTCCTCAGGCATCGCCAGCTGATCCTAGTGCACGCTGATGCTTGCGCTGCTGCTGTAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS TCA 90 bp | CGGGAAGTCCAAATGGAGACTTTGCCAGGTGGTTCTACGTGGTTCTaGCTTCTCAGTGTCCGGACAGTTCTTTACAGCAGCAGCGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: REVQMETLPGGSTWF*LLSVRTVLYSSSAS Trigger: GCTTGCGCTGCTGCTGTAAAGAACTGTCCGGACACTGAGAAGTCAGAACCACGTAGAACCACCTGGCAAAGTCTCCATTTGGACTTCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS TCA 90 bp | TCCCACCTTAGCTCCCTACCAGCTTTCCAGAACATACTTTTGAATTaGGTTTGGAGTGAGGACCTGGATCACGTGGCTCTGGGCAACATC | + |
|
Preference number: 5 (lower is better) Translates to: SHLSSLPAFQNILLN*VWSEDLDHVALGNI Trigger: GATGTTGCCCAGAGCCACGTGATCCAGGTCCTCACTCCAAACTCAATTCAAAAGTATGTTCTGGAAAGCTGGTAGGGAGCTAAGGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS CCA 90 bp | CGGAGTGAAAGACACTCGGGAAGTCCAAATGGAGACTTTGCCAGGTaGTTCTACGTGGTTCTGACTTCTCAGTGTCCGGACAGTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSERHSGSPNGDFAR*FYVVLTSQCPDSSL Trigger: TAAAGAACTGTCCGGACACTGAGAAGTCAGAACCACGTAGAACCACCTGGCAAAGTCTCCATTTGGACTTCCCGAGTGTCTTTCACTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS TCA 90 bp | TTAGATCCCACCTTAGCTCCCTACCAGCTTTCCAGAACATACTTTTaGATTGAGTTTGGAGTGAGGACCTGGATCACGTGGCTCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LDPTLAPYQLSRTYF*IEFGVRTWITWLWA Trigger: TGCCCAGAGCCACGTGATCCAGGTCCTCACTCCAAACTCAATTCAAAAGTATGTTCTGGAAAGCTGGTAGGGAGCTAAGGTGGGATCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS TCA 90 bp | CTCCCTACCAGCTTTCCAGAACATACTTTTGAATTGAGTTTGGAGTaGGGACCTGGATCACGTGGCTCTGGGCAACATCATTTTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPTSFPEHTFELSLE*GPGSRGSGQHHFPQ Trigger: TTGAGGAAAATGATGTTGCCCAGAGCCACGTGATCCAGGTCCTCACTCCAAACTCAATTCAAAAGTATGTTCTGGAAAGCTGGTAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS CCA 90 bp | GTCTCGTCCTTCAACTTTAAAAACAACTATTTCACCAGCTCTGATTaGGTCTTCCCGGAAATTTGTGAGGAACAGGAGGTCTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSFNFKNNYFTSSD*VFPEICEEQEVSSV Trigger: CACAGAGGAGACCTCCTGTTCCTCACAAATTTCCGGGAAGACCCAATCAGAGCTGGTGAAATAGTTGTTTTTAAAGTTGAAGGACGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000509791.7 ENST00000585864.1 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR CAA 90 bp | GTTCCATCCTCTCTCTTATCCAAAGCCTTTCACCAGAGTGTCTGGAAAGACAGGCAGAAGCAGAACTCATaGCTGGACAACTATACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPSSLLSKAFHQSVWKDRQKQNS*LDNYTK Trigger: CTTTGTATAGTTGTCCAGCAATGAGTTCTGCTTCTG...CCTGTCTTTCCAGACACTCTGGTGAAAGGCTTTGGATAAGAGAGAGGATGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CAA 90 bp | GTTGCCAAGAGAGGGGAAGAATTCCCTTGTTTGGTTTTTAATGAGGATACATTCCAGTTCTGGCCTTCTTaGTACAAGCCTCTATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VAKRGEEFPCLVFNEDTFQFWPS*YKPLSS Trigger: TGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTG...GAATGTATCCTCATTAAAAACCAAACAAGGGAATTCTTCCCCTCTCTTGGCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509791.7 |
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| CDS-3UTR CAA 90 bp | ATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTTAGGATTCACGTTTTAAAAAGAGCATACCTCTaGCTCTTCCCACCACGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IHFNLVPGTASHFRIHVLKRAYL*LFPPRP Trigger: AGGACGTGGTGGGAAGAGCAAGAGGTATGCTCTTTT...TAAAACGTGAATCCTAAAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000588875.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCTTTTTCAACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATCAGTTCTGGCCTTCTTaGTACAAGCCTCTATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FLFFNRIHFNLVPGTASHQFWPS*YKPLSS Trigger: TGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTG...ATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGTTGAAAAAGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000299714.7 ENST00000587834.6 ENST00000588875.2 |
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| CDS-3UTR CAA 90 bp | TCTCTTTTTCAACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTCAGTTCTGGCCTTCTTaGTACAAGCCTCTATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SLFQQNSFQSGPRNCFSFQFWPS*YKPLSS Trigger: TGATGATAGAGGCTTGTACAAAGAAGGCCAGAACTG...AAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGTTGAAAAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299714.7 ENST00000588875.2 |
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| CDS-3UTR CAA 90 bp | ACAGAATTCATTTCAATCTGGTCCCAGGAACTGCTTCTCATTTTAGGATTCACGCCTTTAGTCAGAAATTaGATGTCTCCATTATCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TEFISIWSQELLLILGFTPLVRN*MSPLSQ Trigger: CTGAGATAATGGAGACATCAAATTTCTGACTAAAGG...CGTGAATCCTAAAATGAGAAGCAGTTCCTGGGACCAGATTGAAATGAATTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299714.7 |
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| CDS TCA 90 bp | TCTGGGCAACATCATTTTCCTCAACTATCCAAATTTAATATTAACTaGGATGGAATGTGGTGGTATGAACTCTTTTTGAGCATTGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGQHHFPQLSKFNIN*DGMWWYELFLSIEY Trigger: GTACTCAATGCTCAAAAAGAGTTCATACCACCACATTCCATCTCAGTTAATATTAAATTTGGATAGTTGAGGAAAATGATGTTGCCCAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS CCA 72 bp | AGCAGGGTCTCCGGGGACCTAGCGGCCCGCCGGCTCTaGGTGGCACAGACGGCTGCGGAGCACCTGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRVSGDLAARRL*VAQTAAEHLPA Trigger: GGCCGGCAGGTGCTCCGCAGCCGTCTGTGCCACCCAGAGCCGGCGGGCCGCTAGGTCCCCGGAGACCCTGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299714.7 ENST00000509791.7 |
||
| CDS TCA 72 bp | CCTGGGTCTCTGAGGACTCTCTCTGCCTCACAAACCTaGAGAGCCACAGCCTCCCCCAGTGCCGCTCACATC | + |
|
Preference number: 6 (lower is better) Translates to: PGSLRTLSASQT*RATASPSAAHI Trigger: GATGTGAGCGGCACTGGGGGAGGCTGTGGCTCTTCAGGTTTGTGAGGCAGAGAGAGTCCTCAGAGACCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS GCA 72 bp | TGCCTCACAAACCTGAAGAGCCACAGCCTCCCCCAGTaGCGCTCACATCCTGGCTTTCTCTGGCTGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CLTNLKSHSLPQ*RSHPGFLWLCQ Trigger: CTGGCACAGCCAGAGAAAGCCAGGATGTGAGCGGCACTGGGGGAGGCTGTGGCTCTTCAGGTTTGTGAGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS GCA 72 bp | GGGGACACCAATTCCTGGGTCTCTGAGGACTCTCTCTaGCTCACAAACCTGAAGAGCCACAGCCTCCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GDTNSWVSEDSL*LTNLKSHSLPQ Trigger: CTGGGGGAGGCTGTGGCTCTTCAGGTTTGTGAGGCAGAGAGAGTCCTCAGAGACCCAGGAATTGGTGTCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS CCA 72 bp | GAAGAGCCACAGCCTCCCCCAGTGCCGCTCACATCCTaGCTTTCTCTGGCTGTGCCAGTTCCCATTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: EEPQPPPVPLTS*LSLAVPVPILP Trigger: TGGAAGAATGGGAACTGGCACAGCCAGAGAAAGCCAGGATGTGAGCGGCACTGGGGGAGGCTGTGGCTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS GCA 72 bp | GCGCAAGCATCAGCGTGCACTAGGATCAGCTGGCGATaGCTGAGGACTGCACTTCAGACACATTCCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: AQASACTRISWR*LRTALQTHSQV Trigger: CACCTGGGAATGTGTCTGAAGTGCAGTCCTCAGGCATCGCCAGCTGATCCTAGTGCACGCTGATGCTTGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS CCA 72 bp | GCAGCAGCGCAAGCATCAGCGTGCACTAGGATCAGCTaGCGATGCCTGAGGACTGCACTTCAGACACATTCC | + |
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Preference number: 6 (lower is better) Translates to: AAAQASACTRIS*RCLRTALQTHS Trigger: GGAATGTGTCTGAAGTGCAGTCCTCAGGCATCGCCAGCTGATCCTAGTGCACGCTGATGCTTGCGCTGCTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS TCA 72 bp | TCCCGGAAATTTGTGAGGAACAGGAGGTCTCCTCTGTaGAAGGCCGGCTCCATACTGCCACTCAGCACCACC | + |
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Preference number: 6 (lower is better) Translates to: SRKFVRNRRSPL*KAGSILPLSTT Trigger: GGTGGTGCTGAGTGGCAGTATGGAGCCGGCCTTTCACAGAGGAGACCTCCTGTTCCTCACAAATTTCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000299714.7 ENST00000509791.7 ENST00000585864.1 ENST00000587834.6 ENST00000588875.2 |
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| CDS GCA 72 bp | GGACAGTTCTTTACAGCAGCAGCGCAAGCATCAGCGTaGACTAGGATCAGCTGGCGATGCCTGAGGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: GQFFTAAAQASA*TRISWRCLRTA Trigger: TGCAGTCCTCAGGCATCGCCAGCTGATCCTAGTGCACGCTGATGCTTGCGCTGCTGCTGTAAAGAACTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS CCA 72 bp | AGCCTCCCCCAGTGCCGCTCACATCCTGGCTTTCTCTaGCTGTGCCAGTTCCCATTCTTCCATCTGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLPQCRSHPGFL*LCQFPFFHLFS Trigger: GGAAAACAGATGGAAGAATGGGAACTGGCACAGCCAGAGAAAGCCAGGATGTGAGCGGCACTGGGGGAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS TCA 72 bp | TTTCCTCCAGAGATTTCTGTTCCCCTCTCCAGGGAATaGACTCCCAGACCTCTGCTGAGGAGGGTGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: FPPEISVPLSRE*TPRPLLRRVRP Trigger: AGGCCTCACCCTCCTCAGCAGAGGTCTGGGAGTTCATTCCCTGGAGAGGGGAACAGAAATCTCTGGAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS GCA 72 bp | CCCCAGTGCCGCTCACATCCTGGCTTTCTCTGGCTGTaGCAGTTCCCATTCTTCCATCTGTTTTCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PQCRSHPGFLWL*QFPFFHLFSSF Trigger: GAAGCTGGAAAACAGATGGAAGAATGGGAACTGGCACAGCCAGAGAAAGCCAGGATGTGAGCGGCACTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS CCA 72 bp | GTCCCCTTCACCTTCAGTTCTGGGGACACCAATTCCTaGGTCTCTGAGGACTCTCTCTGCCTCACAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: VPFTFSSGDTNS*VSEDSLCLTNL Trigger: CAGGTTTGTGAGGCAGAGAGAGTCCTCAGAGACCCAGGAATTGGTGTCCCCAGAACTGAAGGTGAAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS TCA 72 bp | CACCTTCAGTTCTGGGGACACCAATTCCTGGGTCTCTaGGGACTCTCTCTGCCTCACAAACCTGAAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: HLQFWGHQFLGL*GLSLPHKPEEP Trigger: TGGCTCTTCAGGTTTGTGAGGCAGAGAGAGTCCTCAGAGACCCAGGAATTGGTGTCCCCAGAACTGAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS CCA 72 bp | AGACACTCGGGAAGTCCAAATGGAGACTTTGCCAGGTaGTTCTACGTGGTTCTGACTTCTCAGTGTCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: RHSGSPNGDFAR*FYVVLTSQCPD Trigger: GTCCGGACACTGAGAAGTCAGAACCACGTAGAACCACCTGGCAAAGTCTCCATTTGGACTTCCCGAGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS TCA 72 bp | CAAATGGAGACTTTGCCAGGTGGTTCTACGTGGTTCTaGCTTCTCAGTGTCCGGACAGTTCTTTACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QMETLPGGSTWF*LLSVRTVLYSS Trigger: GCTGCTGTAAAGAACTGTCCGGACACTGAGAAGTCAGAACCACGTAGAACCACCTGGCAAAGTCTCCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS GCA 72 bp | CTCTGGGTGGAAGACAAGGAGAGCGAGGGGTCTCACTaGTTCTCTGCTTTTCTACCCAATCAAACTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: LWVEDKESEGSH*FSAFLPNQTDF Trigger: GAAATCAGTTTGATTGGGTAGAAAAGCAGAGAAGCAGTGAGACCCCTCGCTCTCCTTGTCTTCCACCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592774.1 |
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| CDS TCA 72 bp | AGCTCCCTACCAGCTTTCCAGAACATACTTTTGAATTaGGTTTGGAGTGAGGACCTGGATCACGTGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSLPAFQNILLN*VWSEDLDHVAL Trigger: CAGAGCCACGTGATCCAGGTCCTCACTCCAAACTCAATTCAAAAGTATGTTCTGGAAAGCTGGTAGGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS TCA 72 bp | GTCTCACTGCTTCTCTGCTTTTCTACCCAATCAAACTaGTTTCAGCCCTACGGTCCCCTTCACCTTCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VSLLLCFSTQSN*FQPYGPLHLQF Trigger: GAACTGAAGGTGAAGGGGACCGTAGGGCTGAAATCAGTTTGATTGGGTAGAAAAGCAGAGAAGCAGTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS TCA 72 bp | ACCTTAGCTCCCTACCAGCTTTCCAGAACATACTTTTaGATTGAGTTTGGAGTGAGGACCTGGATCACGTGG | + |
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Preference number: 6 (lower is better) Translates to: TLAPYQLSRTYF*IEFGVRTWITW Trigger: CCACGTGATCCAGGTCCTCACTCCAAACTCAATTCAAAAGTATGTTCTGGAAAGCTGGTAGGGAGCTAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS TCA 72 bp | AGCTTTCCAGAACATACTTTTGAATTGAGTTTGGAGTaGGGACCTGGATCACGTGGCTCTGGGCAACATCAT | + |
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Preference number: 6 (lower is better) Translates to: SFPEHTFELSLE*GPGSRGSGQHH Trigger: ATGATGTTGCCCAGAGCCACGTGATCCAGGTCCTCACTCCAAACTCAATTCAAAAGTATGTTCTGGAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000592774.1 ENST00000593132.1 |
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| CDS TCA 72 bp | CAGAAAGAGTTAAGCATTTGGTCCAAAGTCACCCAGTaGGTCAATGGCAGAACTCAGAACATAATCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: QKELSIWSKVTQ*VNGRTQNIIQC Trigger: GCACTGGATTATGTTCTGAGTTCTGCCATTGACTCACTGGGTGACTTTGGACCAAATGCTTAACTCTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585864.1 |
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| CDS CAA 72 bp | TACTACAACTCCCATCCTACAGAAAGAGTTAAGCATTaGGTCCAAAGTCACCCAGTGAGTCAATGGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: YYNSHPTERVKH*VQSHPVSQWQN Trigger: GTTCTGCCATTGACTCACTGGGTGACTTTGGACCAAATGCTTAACTCTTTCTGTAGGATGGGAGTTGTAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585864.1 |
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| CDS CAA 90 bp | GGGTTTAACTACTACAACTCCCATCCTACAGAAAGAGTTAAGCATTaGGTCCAAAGTCACCCAGTGAGTCAATGGCAGAACTCAGAACAT | + |
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Preference number: 6 (lower is better) Translates to: GFNYYNSHPTERVKH*VQSHPVSQWQNSEH Trigger: ATGTTCTGAGTTCTGCCATTGACTCACTGGGTGACTTTGGACCAAATGCTTAACTCTTTCTGTAGGATGGGAGTTGTAGTAGTTAAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585864.1 |
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