Pregenerated sensors for SEC11A (Homo sapiens)
Ensembl gene IDs: ENSG00000140612Ensembl transcript IDs: ENST00000268220.12, ENST00000455959.7, ENST00000558134.5, ENST00000558217.5, ENST00000558924.1, ENST00000559376.1, ENST00000559729.5, ENST00000560266.5, ENST00000560409.5
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTaGAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGCACTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: YMPFLIEGGMTVSNS*RAAFSFTSLCRHFR Trigger: TCTAAAGTGCCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CCA 90 bp | CTTACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCTCAAAATACAAACACTaGGGGCTTTGGCTCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: LTTTSVYAIPNRRRYDGFSKYKH*GLWLNL Trigger: AAGGTTGAGCCAAAGCCCCCAGTGTTTGTATTTTGA...GAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CCA 90 bp | ACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAATCAAAATACAAACACTaGGGGCTTTGGCTCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: TTTSVYAIPNRRRYDGFKSKYKH*GLWLNL Trigger: AAGGTTGAGCCAAAGCCCCCAGTGTTTGTATTTTGA...TTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCAAAATACAAACACTaGGGGCTTTGGCTCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: RRRYDGFKLVQSCIFIYKSKYKH*GLWLNL Trigger: AAGGTTGAGCCAAAGCCCCCAGTGTTTGTATTTTGA...CTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CCA 90 bp | AGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTCAAAATACAAACACTaGGGGCTTTGGCTCAACCTT | + |
|
Preference number: 2 (lower is better) Translates to: RYDGFKLVQSCIFIYKSLSKYKH*GLWLNL Trigger: AAGGTTGAGCCAAAGCCCCCAGTGTTTGTATTTTGA...CAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTAGGCACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCACACAAACTCTGGCATaGAAACATAAACTAATGCAA | + |
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Preference number: 2 (lower is better) Translates to: LCRHFRSEAWLQNTNTGGTQTLA*KHKLMQ Trigger: TTGCATTAGTTTATGTTTCCATGCCAGAGTTTGTGT...GCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTGCCTACAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CCA 90 bp | GGCACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCTTTGGCTACACAAACTCTGGCATaGAAACATAAACTAATGCAA | + |
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Preference number: 2 (lower is better) Translates to: GTLEVKLGFKIQTLGALATQTLA*KHKLMQ Trigger: TTGCATTAGTTTATGTTTCCATGCCAGAGTTTGTGT...AGCCAAAGCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CCA 90 bp | AACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGCACTTTAGAAGTACACAAACTCTGGCATaGAAACATAAACTAATGCAA | + |
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Preference number: 2 (lower is better) Translates to: NSCRAAFSFTSLCRHFRSTQTLA*KHKLMQ Trigger: TTGCATTAGTTTATGTTTCCATGCCAGAGTTTGTGT...ACTTCTAAAGTGCCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CCA 90 bp | AATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACACACAAACTCTGGCATaGAAACATAAACTAATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: NRRRYDGFKLVQSCIFIYTQTLA*KHKLMQ Trigger: TTGCATTAGTTTATGTTTCCATGCCAGAGTTTGTGT...GTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGCACTTTAACACAAACTCTGGCATaGAAACATAAACTAATGCAA | + |
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Preference number: 2 (lower is better) Translates to: FQTRAELHFHLQVSVGTLTQTLA*KHKLMQ Trigger: TTGCATTAGTTTATGTTTCCATGCCAGAGTTTGTGT...TAAAGTGCCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CAA 90 bp | CTTACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCCAAACACTGGGGGCTTaGGCTCAACCTTTTAATATA | + |
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Preference number: 3 (lower is better) Translates to: LTTTSVYAIPNRRRYDGFQTLGA*AQPFNI Trigger: TATATTAAAAGGTTGAGCCAAAGCCCCCAGTGTTTG...GAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CAA 90 bp | ACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCCAAACACTGGGGGCTTaGGCTCAACCTTTTAATATA | + |
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Preference number: 3 (lower is better) Translates to: TTSVYAIPNRRRYDGFKLQTLGA*AQPFNI Trigger: TATATTAAAAGGTTGAGCCAAAGCCCCCAGTGTTTG...GAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CAA 90 bp | GAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCAAACACTGGGGGCTTaGGCTCAACCTTTTAATATA | + |
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Preference number: 3 (lower is better) Translates to: EGGMTVSNSCRAAFSFTSQTLGA*AQPFNI Trigger: TATATTAAAAGGTTGAGCCAAAGCCCCCAGTGTTTG...ACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR GCA 72 bp | TTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTaGAGAGCTGCATTTTCATTTACAAGTCTCTGTAGG | + |
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Preference number: 3 (lower is better) Translates to: FLIEGGMTVSNS*RAAFSFTSLCR Trigger: CCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CAA 90 bp | AATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACCAAACACTGGGGGCTTaGGCTCAACCTTTTAATATA | + |
|
Preference number: 3 (lower is better) Translates to: NRRRYDGFKLVQSCIFIYQTLGA*AQPFNI Trigger: TATATTAAAAGGTTGAGCCAAAGCCCCCAGTGTTTG...GTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| 3UTR-3UTR CAA 90 bp | CTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTCAAACACTGGGGGCTTaGGCTCAACCTTTTAATATA | + |
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Preference number: 3 (lower is better) Translates to: LIEGGMTVSNSCRAAFSFQTLGA*AQPFNI Trigger: TATATTAAAAGGTTGAGCCAAAGCCCCCAGTGTTTG...AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR CCA 90 bp | AGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTTCCGGGGCGGGAGCTaGCACGGTCGGGCACGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RYDGFKLVQSCIFIYKSLFRGGS*HGRARS Trigger: GGACCGTGCCCGACCGTGCCAGCTCCCGCCCCGGAA...CAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR TCA 90 bp | ATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCAGGGGAAAGGGCGCGATaGCCAGCGGGCGGAACTACT | + |
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Preference number: 4 (lower is better) Translates to: MPFLIEGGMTVSNSCRAAGERAR*PAGGTT Trigger: AGTAGTTCCGCCCGCTGGTCATCGCGCCCTTTCCCC...TGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | CTCTGTAGGCACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCAGCGGGCGGAACTACTaGAGCTCGGGTCGGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LCRHFRSEAWLQNTNTGGSGRNY*SSGRAH Trigger: GTGAGCCCGACCCGAGCTCCAGTAGTTCCGCCCGCT...GCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTGCCTACAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000455959.7 ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | GGCACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCTTTGGCTGGCTTGGCCTCGCCGTaGGAGGGTTCTCACGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GTLEVKLGFKIQTLGALAGLASP*EGSHAL Trigger: CAGAGCGTGAGAACCCTCCCACGGCGAGGCCAAGCC...AGCCAAAGCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR GCA 90 bp | CACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCTTTGGCTCACCCGCGCCCCTTCGCTaGGGAGAGCTGACAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: HFRSEAWLQNTNTGGFGSPAPLR*GELTER Trigger: TCTCTCTGTCAGCTCTCCGCAGCGAAGGGGCGCGGG...TGAGCCAAAGCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR GCA 90 bp | AGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGGGACCCCGCAGTGCTTaGACTTCCGCTTCCGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: RYDGFKLVQSCIFIYKSLGPRSA*TSASGA Trigger: CGCCCCGGAAGCGGAAGTGCAAGCACTGCGGGGTCC...CAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | GTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCAGCGGGCGGAACTACTaGAGCTCGGGTCGGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: VYAIPNRRRYDGFKLVQSSGRNY*SSGRAH Trigger: GTGAGCCCGACCCGAGCTCCAGTAGTTCCGCCCGCT...GCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000455959.7 ENST00000559729.5 |
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| CDS-3UTR TCA 90 bp | TCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGGGGGAAAGGGCGCGATaGCCAGCGGGCGGAACTACT | + |
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Preference number: 4 (lower is better) Translates to: SVYAIPNRRRYDGFKLVQGERAR*PAGGTT Trigger: AGTAGTTCCGCCCGCTGGTCATCGCGCCCTTTCCCC...CTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | GTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCCGACCCAGGCTTAGTTaGGGAGGCTGCTCTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: VYAIPNRRRYDGFKLVQSRPRLS*GGCSAT Trigger: GGTGGCAGAGCAGCCTCCCCAACTAAGCCTGGGTCG...GCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | ACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAAGGGTCGGGCTCACACTaGACAGGACCCCGCAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TTTSVYAIPNRRRYDGFKGSGSH*TGPRSA Trigger: AGCACTGCGGGGTCCTGTCCAGTGTGAGCCCGACCC...TTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR TCA 90 bp | TTAAGACTTACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGGGAAAGGGCGCGATaGCCAGCGGGCGGAACTACT | + |
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Preference number: 4 (lower is better) Translates to: LRLTTTSVYAIPNRRRYDGERAR*PAGGTT Trigger: AGTAGTTCCGCCCGCTGGTCATCGCGCCCTTTCCCC...GTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGTAAGTCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000559729.5 |
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| CDS-3UTR GCA 90 bp | CTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTTTGGGGAGGCTGCTCTaGCACCTTCGGAAGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LIEGGMTVSNSCRAAFSFLGRLL*HLRKAG Trigger: GCCCGCCTTCCGAAGGTGGCAGAGCAGCCTCCCCAA...AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR GCA 90 bp | ACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAAGACAGGACCCCGCAGTaGTTGCACTTCCGCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: TTTSVYAIPNRRRYDGFKDRTPQ*LHFRFR Trigger: CCGGAAGCGGAAGTGCAAGCACTGCGGGGTCCTGTC...TTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | ACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCTCCAGTCTCAGGGCTTaGCCTCGCCGTGGGAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: TTSVYAIPNRRRYDGFKLSSLRA*PRRGRV Trigger: AACCCTCCCACGGCGAGGCCAAGCCCTGAGACTGGA...GAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR GCA 90 bp | ATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGGCTCTGGCTCTCGCCTaGCAAAAACCGACTGGACGC | + |
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Preference number: 4 (lower is better) Translates to: MTVSNSCRAAFSFTSLCRALALA*QKPTGR Trigger: GCGTCCAGTCGGTTTTTGGCAGGCGAGAGCCAGAGC...CCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | AGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGCTGCCAAAAACCGACTaGACGCCACTTCCCGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: RYDGFKLVQSCIFIYKSLLPKTD*TPLPAL Trigger: GAGCGCGGGAAGTGGCGTCCAGTCGGTTTTTGGCAG...CAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR TCA 90 bp | ACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAATTCGCTGCGGAGAGCTaGCAGAGAGACTCACGACCT | + |
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Preference number: 4 (lower is better) Translates to: TTTSVYAIPNRRRYDGFKFAAES*QRDSRP Trigger: AGGTCGTGAGTCTCTCTGTCAGCTCTCCGCAGCGAA...TTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR GCA 90 bp | TTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCTTTGGCTCAACCTTTCTCTCATTGTACCTaGCGCTTGTTCATCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LEVKLGFKIQTLGALAQPFSHCT*RLFIRR Trigger: GCGGCGGATGAACAAGCGGCAGGTACAATGAGAGAA...AGGTTGAGCCAAAGCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455959.7 |
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| CDS-3UTR GCA 90 bp | TTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGCACTTTACTTAGTTGGGGAGGCTaGTCTGCCACCTTCGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: FQTRAELHFHLQVSVGTLLSWGG*SATFGR Trigger: CCTTCCGAAGGTGGCAGAGCAGCCTCCCCAACTAAG...TAAAGTGCCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | TCTGTAGGCACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCTAAGGAACAAATCCCCTaGCTCTCCCCACAACATCTT | + |
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Preference number: 4 (lower is better) Translates to: SVGTLEVKLGFKIQTLGAKEQIP*LSPQHL Trigger: AAGATGTTGTGGGGAGAGCCAGGGGATTTGTTCCTT...AGCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTGCCTACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | ACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAAAGAACTGCATACCCCTaGCTCTCCCCACAACATCTT | + |
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Preference number: 4 (lower is better) Translates to: TTTSVYAIPNRRRYDGFKRTAYP*LSPQHL Trigger: AAGATGTTGTGGGGAGAGCCAGGGGTATGCAGTTCT...TTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000558134.5 |
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| CDS-3UTR CCA 90 bp | TTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGCACTTTAAGGGTTCTCACGCTCTaGCTCTCGCCTGCCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: FQTRAELHFHLQVSVGTLRVLTL*LSPAKN Trigger: GTTTTTGGCAGGCGAGAGCCAGAGCGTGAGAACCCT...TAAAGTGCCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | AGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGAAGGAACAAATCCCCTaGCTCTCCCCACAACATCTT | + |
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Preference number: 4 (lower is better) Translates to: RRRYDGFKLVQSCIFIYKKEQIP*LSPQHL Trigger: AAGATGTTGTGGGGAGAGCCAGGGGATTTGTTCCTT...CTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | AGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGAAGGAACAAATCCCCTaGCTCTCCCCACAACATCTT | + |
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Preference number: 4 (lower is better) Translates to: RYDGFKLVQSCIFIYKSLKEQIP*LSPQHL Trigger: AAGATGTTGTGGGGAGAGCCAGGGGATTTGTTCCTT...CAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | GGCACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCTTTGGCTTCAAAATACAAACACTaGGGGCTTTGGCTCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTLEVKLGFKIQTLGALASKYKH*GLWLNL Trigger: AAGGTTGAGCCAAAGCCCCCAGTGTTTGTATTTTGA...AGCCAAAGCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | ATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCAAAACTCGTGCAGAGCTaGATTTTCATTTACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLIEGGMTVSNSCRAAKLVQS*IFIYKS Trigger: AGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTT...TGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | TCTGTAGGCACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCTACGGTTTCAAACTCGTaGAGAGCTGCATTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SVGTLEVKLGFKIQTLGATVSNS*RAAFSF Trigger: AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGT...AGCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTGCCTACAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | TCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGTACAGGTGTATAAAGTaGTTCACACATGGCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVYAIPNRRRYDGFKLVQYRCIK*FTHGKS Trigger: GCTCTTGCCATGTGTGAAGCACTTTATACACCTGTA...CTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455959.7 |
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| CDS-3UTR GCA 90 bp | ACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAATTGATATGCCCATTTTaGCTGAGCACCACTACAATC | + |
|
Preference number: 4 (lower is better) Translates to: TTTSVYAIPNRRRYDGFKLICPF*LSTTTI Trigger: GATTGTAGTGGTGCTCAGGCAAAATGGGCATATCAA...TTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CCA 90 bp | ATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGTCAAAATACAAACACTaGGGGCTTTGGCTCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: MTVSNSCRAAFSFTSLCRSKYKH*GLWLNL Trigger: AAGGTTGAGCCAAAGCCCCCAGTGTTTGTATTTTGA...CCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR CCA 90 bp | ACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGTCAAAATACAAACACTaGGGGCTTTGGCTCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSVYAIPNRRRYDGFKLVSKYKH*GLWLNL Trigger: AAGGTTGAGCCAAAGCCCCCAGTGTTTGTATTTTGA...CACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | AGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGACGGTTTCAAACTCGTaGAGAGCTGCATTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RRRYDGFKLVQSCIFIYKTVSNS*RAAFSF Trigger: AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGT...CTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | GAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTACGGTTTCAAACTCGTaGAGAGCTGCATTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EGGMTVSNSCRAAFSFTSTVSNS*RAAFSF Trigger: AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGT...ACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR CCA 90 bp | CTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTTCAAAATACAAACACTaGGGGCTTTGGCTCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIEGGMTVSNSCRAAFSFSKYKH*GLWLNL Trigger: AAGGTTGAGCCAAAGCCCCCAGTGTTTGTATTTTGA...AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
||
| CDS-3UTR GCA 90 bp | TCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAAACTCGTGCAGAGCTaGATTTTCATTTACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVYAIPNRRRYDGFKLVQKLVQS*IFIYKS Trigger: AGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTT...CTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | ACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCAAACTCGTGCAGAGCTaGATTTTCATTTACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSVYAIPNRRRYDGFKLKLVQS*IFIYKS Trigger: AGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTT...GAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | AACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGCACTTTAGAAGTACGGTTTCAAACTCGTaGAGAGCTGCATTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: NSCRAAFSFTSLCRHFRSTVSNS*RAAFSF Trigger: AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGT...ACTTCTAAAGTGCCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | AATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACACGGTTTCAAACTCGTaGAGAGCTGCATTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: NRRRYDGFKLVQSCIFIYTVSNS*RAAFSF Trigger: AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGT...GTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | CTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACGGTTTCAAACTCGTaGAGAGCTGCATTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LIEGGMTVSNSCRAAFSFTVSNS*RAAFSF Trigger: AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGT...AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | AATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAACTCGTGCAGAGCTaGATTTTCATTTACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRRRYDGFKLVQSCIFIYKLVQS*IFIYKS Trigger: AGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTT...GTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR GCA 90 bp | CTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTAAACTCGTGCAGAGCTaGATTTTCATTTACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIEGGMTVSNSCRAAFSFKLVQS*IFIYKS Trigger: AGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTT...AAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR CCA 90 bp | GAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTACACAAACTCTGGCATaGAAACATAAACTAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EGGMTVSNSCRAAFSFTSTQTLA*KHKLMQ Trigger: TTGCATTAGTTTATGTTTCCATGCCAGAGTTTGTGT...ACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR CCA 90 bp | AAGTTAAGACTTACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATACACAAACTCTGGCATaGAAACATAAACTAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLRLTTTSVYAIPNRRRYTQTLA*KHKLMQ Trigger: TTGCATTAGTTTATGTTTCCATGCCAGAGTTTGTGT...ATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGTAAGTCTTAACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS GCA 90 bp | GGCTTGGCCTCGCCGTGGGAGGGTTCTCACGCTCTGGCTCTCGCCTaGCAAAAACCGACTGGACGCCACTTCCCGCGCTCGGCCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLASPWEGSHALALA*QKPTGRHFPRSAPR Trigger: CCGCGGGGCCGAGCGCGGGAAGTGGCGTCCAGTCGGTTTTTGGCAGGCGAGAGCCAGAGCGTGAGAACCCTCCCACGGCGAGGCCAAGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS GCA 90 bp | CTGGAGCTCGGGTCGGGCTCACACTGGACAGGACCCCGCAGTGCTTaGACTTCCGCTTCCGGGGCGGGAGCTGGCACGGTCGGGCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: LELGSGSHWTGPRSA*TSASGAGAGTVGHG Trigger: ACCGTGCCCGACCGTGCCAGCTCCCGCCCCGGAAGCGGAAGTGCAAGCACTGCGGGGTCCTGTCCAGTGTGAGCCCGACCCGAGCTCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS GCA 90 bp | GGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTaGCCGGCCACCACCCGGTCTGGGAGGAGTACCCAACAGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GASARPPLLGSEEPL*PATTRSGRSTQQLI Trigger: AATGAGCTGTTGGGTACTCCTCCCAGACCGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CCA 90 bp | GTGGGAGGGTTCTCACGCTCTGGCTCTCGCCTGCCAAAAACCGACTaGACGCCACTTCCCGCGCTCGGCCCCGCGGCCCTTCACCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGGFSRSGSRLPKTD*TPLPALGPAALHRG Trigger: GCCTCGGTGAAGGGCCGCGGGGCCGAGCGCGGGAAGTGGCGTCCAGTCGGTTTTTGGCAGGCGAGAGCCAGAGCGTGAGAACCCTCCCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS GCA 90 bp | ACTACTGGAGCTCGGGTCGGGCTCACACTGGACAGGACCCCGCAGTaGTTGCACTTCCGCTTCCGGGGCGGGAGCTGGCACGGTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TTGARVGLTLDRTPQ*LHFRFRGGSWHGRA Trigger: TGCCCGACCGTGCCAGCTCCCGCCCCGGAAGCGGAAGTGCAAGCACTGCGGGGTCCTGTCCAGTGTGAGCCCGACCCGAGCTCCAGTAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS CCA 90 bp | TCTGCCTGGCTGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTaGCTGCCCAGTCTGGAAAGTGAGGACCGTCTCTGCCCGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAWLPIVWDVRSPSA*LPSLESEDRLCPAA Trigger: GGCGGCCGGGCAGAGACGGTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCAGCCAGGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CCA 90 bp | GATGACCAGCGGGCGGAACTACTGGAGCTCGGGTCGGGCTCACACTaGACAGGACCCCGCAGTGCTTGCACTTCCGCTTCCGGGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DDQRAELLELGSGSH*TGPRSACTSASGAG Trigger: TCCCGCCCCGGAAGCGGAAGTGCAAGCACTGCGGGGTCCTGTCCAGTGTGAGCCCGACCCGAGCTCCAGTAGTTCCGCCCGCTGGTCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS CCA 90 bp | TGGCATGATCTCGGCTCGCTACAACCACCTCCCAGCCGCCTGCCTTaGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WHDLGSLQPPPSRLP*PPKEPRLQPLPGRH Trigger: GTGGCGGCCGGGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGTAGCGAGCCGAGATCATGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS TCA 90 bp | CTGGACTGTGCTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTaGTTCTCCTGCCTCAGCCTGCCCGGTGCCTGCGATTGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LDCAAAISAHCNLPA*FSCLSLPGACDCRR Trigger: GCGCCTGCAATCGCAGGCACCGGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGCACAGTCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS GCA 90 bp | TGCAGTGGCATGATCTCGGCTCGCTACAACCACCTCCCAGCCGCCTaGCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSGMISARYNHLPAA*LGLPKSRDCSLCPA Trigger: GGCCGGGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGTAGCGAGCCGAGATCATGCCACTGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CCA 90 bp | TCCAGTCTCAGGGCTTGGCCTCGCCGTGGGAGGGTTCTCACGCTCTaGCTCTCGCCTGCCAAAAACCGACTGGACGCCACTTCCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLRAWPRRGRVLTL*LSPAKNRLDATSRA Trigger: AGCGCGGGAAGTGGCGTCCAGTCGGTTTTTGGCAGGCGAGAGCCAGAGCGTGAGAACCCTCCCACGGCGAGGCCAAGCCCTGAGACTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS CCA 90 bp | AGACTCACGACCTTGCTAGTCCAGTCTCAGGGCTTGGCCTCGCCGTaGGAGGGTTCTCACGCTCTGGCTCTCGCCTGCCAAAAACCGACT | + |
|
Preference number: 5 (lower is better) Translates to: RLTTLLVQSQGLASP*EGSHALALACQKPT Trigger: AGTCGGTTTTTGGCAGGCGAGAGCCAGAGCGTGAGAACCCTCCCACGGCGAGGCCAAGCCCTGAGACTGGACTAGCAAGGTCGTGAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS TCA 90 bp | CTGCCCGGCCACCACCCGGTCTGGGAGGAGTACCCAACAGCTCATTaGGAACGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGHHPVWEEYPTAH*ERAMMTMAVLWNRK Trigger: CTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTACTCCTCCCAGACCGGGTGGTGGCCGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS-3UTR CAA 90 bp | ACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGGTCCAGTCTCAGGGCTaGGCCTCGCCGTGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSVYAIPNRRRYDGFKLVVQSQG*ASPWEG Trigger: ACCCTCCCACGGCGAGGCCAAGCCCTGAGACTGGAC...CACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCATATACTGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CAA 90 bp | AATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAGGACCCCGCAGTGCTaGCACTTCCGCTTCCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NRRRYDGFKLVQSCIFIYRTPQC*HFRFRG Trigger: GCCCCGGAAGCGGAAGTGCAAGCACTGCGGGGTCCT...GTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CAA 90 bp | CTCTGTAGGCACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCGAGAGACTCACGACCTaGCTAGTCCAGTCTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCRHFRSEAWLQNTNTGGERLTT*LVQSQG Trigger: GCCCTGAGACTGGACTAGCAAGGTCGTGAGTCTCTC...GCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTGCCTACAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS GCA 90 bp | CTCTGTCCTCTCCCTTCTAGCAGGATCACTGAGACCTGTCTCTCTTaGCCCATCCCCAAACTCCCATTCCATACACTGGTGTTTCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LCPLPSSRITETCLS*PIPKLPFHTLVFLK Trigger: TTTAAGAAACACCAGTGTATGGAATGGGAGTTTGGGGATGGGGCAAGAGAGACAGGTCTCAGTGATCCTGCTAGAAGGGAGAGGACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CCA 90 bp | TTTCTTCTTTATCCTCCTCTTCTATCGCTGGACTCCAGAGCGGACTaGCAATATTGTACTAAGCTAGAGCCTGTCATAGGGACGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLYPPLLSLDSRAD*QYCTKLEPVIGTLS Trigger: GCTCAGCGTCCCTATGACAGGCTCTAGCTTAGTACAATATTGCCAGTCCGCTCTGGAGTCCAGCGATAGAAGAGGAGGATAAAGAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS-3UTR CAA 90 bp | GAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCATTGTACCTGCCGCTaGTTCATCCGCCGCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: EGGMTVSNSCRAAFSFTSHCTCR*FIRRTS Trigger: CGATGTGCGGCGGATGAACAAGCGGCAGGTACAATG...ACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455959.7 |
||
| CDS-3UTR CAA 90 bp | ATGCCATTCCTAATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCACAAACACTGGGGGCTTaGGCTCAACCTTTTAATATA | + |
|
Preference number: 5 (lower is better) Translates to: MPFLIEGGMTVSNSCRAAQTLGA*AQPFNI Trigger: TATATTAAAAGGTTGAGCCAAAGCCCCCAGTGTTTG...TGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATTAGGAATGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR CAA 90 bp | TCTGTAGGCACTTTAGAAGTGAAGCTTGGCTTCAAAATACAAACACTGGGGGCTCAAACACTGGGGGCTTaGGCTCAACCTTTTAATATA | + |
|
Preference number: 5 (lower is better) Translates to: SVGTLEVKLGFKIQTLGAQTLGA*AQPFNI Trigger: TATATTAAAAGGTTGAGCCAAAGCCCCCAGTGTTTG...AGCCCCCAGTGTTTGTATTTTGAAGCCAAGCTTCACTTCTAAAGTGCCTACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR CAA 90 bp | AGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGCTTGATATGCCCATTTaGCCTGAGCACCACTACAAT | + |
|
Preference number: 5 (lower is better) Translates to: RYDGFKLVQSCIFIYKSLLDMPI*PEHHYN Trigger: ATTGTAGTGGTGCTCAGGCAAAATGGGCATATCAAG...CAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS-3UTR CAA 90 bp | ATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGCAAACACTGGGGGCTTaGGCTCAACCTTTTAATATA | + |
|
Preference number: 5 (lower is better) Translates to: MTVSNSCRAAFSFTSLCRQTLGA*AQPFNI Trigger: TATATTAAAAGGTTGAGCCAAAGCCCCCAGTGTTTG...CCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS-3UTR CAA 90 bp | AATAGAAGGAGGTATGACGGTTTCAAACTCGTGCAGAGCTGCATTTTCATTTACTTTGCATTTCTCTCATaGTACCTGCCGCTTGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: NRRRYDGFKLVQSCIFIYFAFLS*YLPLVH Trigger: ATGAACAAGCGGCAGGTACAATGAGAGAAATGCAAA...GTAAATGAAAATGCAGCTCTGCACGAGTTTGAAACCGTCATACCTCCTTCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455959.7 |
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| CDS-3UTR CAA 90 bp | TTTCAAACTCGTGCAGAGCTGCATTTTCATTTACAAGTCTCTGTAGGCACTTTAACACATTTAGGCTCCTaGAAGGCCGAGTCTTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: FQTRAELHFHLQVSVGTLTHLGS*KAESFL Trigger: TAAGAAAGACTCGGCCTTCAAGGAGCCTAAATGTGT...TAAAGTGCCTACAGAGACTTGTAAATGAAAATGCAGCTCTGCACGAGTTTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455959.7 |
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| CDS CCA 90 bp | AGAAAGAGAAAATTAGCAGGGTACCATCGATGTGGGCGGAATAGGTaGTTAGCAAATGTAAAACTTTCTTCTTTATCCTCCTCTTCTATC | + |
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Preference number: 5 (lower is better) Translates to: RKRKLAGYHRCGRNR*LANVKLSSLSSSSI Trigger: GATAGAAGAGGAGGATAAAGAAGAAAGTTTTACATTTGCTAACCACCTATTCCGCCCACATCGATGGTACCCTGCTAATTTTCTCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS-3UTR CAA 90 bp | AAGTTAAGACTTACGACCACCTCAGTATATGCCATTCCTAATAGAAGGAGGTATCAAACACTGGGGGCTTaGGCTCAACCTTTTAATATA | + |
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Preference number: 5 (lower is better) Translates to: KLRLTTTSVYAIPNRRRYQTLGA*AQPFNI Trigger: TATATTAAAAGGTTGAGCCAAAGCCCCCAGTGTTTG...ATACCTCCTTCTATTAGGAATGGCATATACTGAGGTGGTCGTAAGTCTTAACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000268220.12 ENST00000455959.7 ENST00000558134.5 ENST00000558217.5 ENST00000559729.5 ENST00000560266.5 |
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| CDS GCA 72 bp | GCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTaGCCGGCCACCACCCGGTCTGGGAGGAGTACCCAA | + |
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Preference number: 6 (lower is better) Translates to: ARPPLLGSEEPL*PATTRSGRSTQ Trigger: TTGGGTACTCCTCCCAGACCGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CAA 90 bp | ACTGGAGCTCGGGTCGGGCTCACACTGGACAGGACCCCGCAGTGCTaGCACTTCCGCTTCCGGGGCGGGAGCTGGCACGGTCGGGCACGG | + |
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Preference number: 6 (lower is better) Translates to: TGARVGLTLDRTPQC*HFRFRGGSWHGRAR Trigger: CCGTGCCCGACCGTGCCAGCTCCCGCCCCGGAAGCGGAAGTGCAAGCACTGCGGGGTCCTGTCCAGTGTGAGCCCGACCCGAGCTCCAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS GCA 72 bp | GGGTCGGGCTCACACTGGACAGGACCCCGCAGTGCTTaGACTTCCGCTTCCGGGGCGGGAGCTGGCACGGTC | + |
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Preference number: 6 (lower is better) Translates to: GSGSHWTGPRSA*TSASGAGAGTV Trigger: GACCGTGCCAGCTCCCGCCCCGGAAGCGGAAGTGCAAGCACTGCGGGGTCCTGTCCAGTGTGAGCCCGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS GCA 72 bp | GCTCGGGTCGGGCTCACACTGGACAGGACCCCGCAGTaGTTGCACTTCCGCTTCCGGGGCGGGAGCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ARVGLTLDRTPQ*LHFRFRGGSWH Trigger: GTGCCAGCTCCCGCCCCGGAAGCGGAAGTGCAAGCACTGCGGGGTCCTGTCCAGTGTGAGCCCGACCCGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS CCA 72 bp | GGAGCGTCTCTGCCTGGCCGCCCATCGTCTGAGATGTaGGAAGCGCCTCTGCCCCGCCGCCCCGTCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: GASLPGRPSSEM*EAPLPRRPVWD Trigger: ATCCCAGACGGGGCGGCGGGGCAGAGGCGCTTCCCACATCTCAGACGATGGGCGGCCAGGCAGAGACGCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CAA 72 bp | CGGGTCGGGCTCACACTGGACAGGACCCCGCAGTGCTaGCACTTCCGCTTCCGGGGCGGGAGCTGGCACGGT | + |
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Preference number: 6 (lower is better) Translates to: RVGLTLDRTPQC*HFRFRGGSWHG Trigger: ACCGTGCCAGCTCCCGCCCCGGAAGCGGAAGTGCAAGCACTGCGGGGTCCTGTCCAGTGTGAGCCCGACCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS GCA 72 bp | CGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTaGCTGGCTGCCCATCGTCTGGGATGTGAGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RPPPRLGSEERL*LAAHRLGCEEP Trigger: GGGCTCCTCACATCCCAGACGATGGGCAGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS TCA 72 bp | GAAATGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTaGGATGTGGGAAGCGCCTCTGCCCCGCCGCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: EMRSVSAWPPIV*DVGSASAPPPR Trigger: ACGGGGCGGCGGGGCAGAGGCGCTTCCCACATCTCAGACGATGGGCGGCCAGGCAGAGACGCTCCTCATTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CCA 72 bp | TTCTCACGCTCTGGCTCTCGCCTGCCAAAAACCGACTaGACGCCACTTCCCGCGCTCGGCCCCGCGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: FSRSGSRLPKTD*TPLPALGPAAL Trigger: AAGGGCCGCGGGGCCGAGCGCGGGAAGTGGCGTCCAGTCGGTTTTTGGCAGGCGAGAGCCAGAGCGTGAGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS GCA 72 bp | TCGCCGTGGGAGGGTTCTCACGCTCTGGCTCTCGCCTaGCAAAAACCGACTGGACGCCACTTCCCGCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SPWEGSHALALA*QKPTGRHFPRS Trigger: CGAGCGCGGGAAGTGGCGTCCAGTCGGTTTTTGGCAGGCGAGAGCCAGAGCGTGAGAACCCTCCCACGGCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS CCA 72 bp | CGGGCGGAACTACTGGAGCTCGGGTCGGGCTCACACTaGACAGGACCCCGCAGTGCTTGCACTTCCGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RAELLELGSGSH*TGPRSACTSAS Trigger: GGAAGCGGAAGTGCAAGCACTGCGGGGTCCTGTCCAGTGTGAGCCCGACCCGAGCTCCAGTAGTTCCGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS TCA 72 bp | GGAGCGTCTCTGCCTGGCTGCCCATCGTCTGGGATGTaGGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GASLPGCPSSGM*GAPLPGCPVWK Trigger: TTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCAGCCAGGCAGAGACGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CCA 72 bp | GAAGTGAGGAGCGTCTCTGCCTGGCTGCCCATCGTCTaGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: EVRSVSAWLPIV*DVRSPSAWLPS Trigger: ACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCAGCCAGGCAGAGACGCTCCTCACTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CCA 72 bp | AGGGCTTGGCCTCGCCGTGGGAGGGTTCTCACGCTCTaGCTCTCGCCTGCCAAAAACCGACTGGACGCCACT | + |
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Preference number: 6 (lower is better) Translates to: RAWPRRGRVLTL*LSPAKNRLDAT Trigger: AGTGGCGTCCAGTCGGTTTTTGGCAGGCGAGAGCCAGAGCGTGAGAACCCTCCCACGGCGAGGCCAAGCCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS CCA 72 bp | ACCTTGCTAGTCCAGTCTCAGGGCTTGGCCTCGCCGTaGGAGGGTTCTCACGCTCTGGCTCTCGCCTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: TLLVQSQGLASP*EGSHALALACQ Trigger: TTGGCAGGCGAGAGCCAGAGCGTGAGAACCCTCCCACGGCGAGGCCAAGCCCTGAGACTGGACTAGCAAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS CAA 72 bp | GAGAGACTCACGACCTTGCTAGTCCAGTCTCAGGGCTaGGCCTCGCCGTGGGAGGGTTCTCACGCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: ERLTTLLVQSQG*ASPWEGSHALA Trigger: AGCCAGAGCGTGAGAACCCTCCCACGGCGAGGCCAAGCCCTGAGACTGGACTAGCAAGGTCGTGAGTCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS CAA 72 bp | CTTCGCTGCGGAGAGCTGACAGAGAGACTCACGACCTaGCTAGTCCAGTCTCAGGGCTTGGCCTCGCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: LRCGELTERLTT*LVQSQGLASPW Trigger: CCACGGCGAGGCCAAGCCCTGAGACTGGACTAGCAAGGTCGTGAGTCTCTCTGTCAGCTCTCCGCAGCGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559729.5 |
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| CDS CCA 72 bp | TCTTTCCACGGTCTCCCTCTGATGCCGAGTCGAAGCTaGACTGTGCTGCTGCCATCTCGGCTCACTGCAACC | + |
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Preference number: 6 (lower is better) Translates to: SFHGLPLMPSRS*TVLLPSRLTAT Trigger: GGTTGCAGTGAGCCGAGATGGCAGCAGCACAGTCCAGCTTCGACTCGGCATCAGAGGGAGACCGTGGAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS GCA 72 bp | TCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAATaGAGTGGCATGATCTCGGCTCGCTACAACCACCTC | + |
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Preference number: 6 (lower is better) Translates to: SFTQCSMVPRLE*SGMISARYNHL Trigger: GAGGTGGTTGTAGCGAGCCGAGATCATGCCACTGCATTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CAA 72 bp | CCACCACCCGGTCTGGGAGGAGTACCCAACAGCTCATaGAGAACGGGCCATGATGACAATGGCGGTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: PPPGLGGVPNSS*RTGHDDNGGFV Trigger: CACAAAACCGCCATTGTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTACTCCTCCCAGACCGGGTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CCA 72 bp | TATCCTCCTCTTCTATCGCTGGACTCCAGAGCGGACTaGCAATATTGTACTAAGCTAGAGCCTGTCATAGGG | + |
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Preference number: 6 (lower is better) Translates to: YPPLLSLDSRAD*QYCTKLEPVIG Trigger: CCCTATGACAGGCTCTAGCTTAGTACAATATTGCCAGTCCGCTCTGGAGTCCAGCGATAGAAGAGGAGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CAA 72 bp | ACTAGAAGCTCTATAAAGGCAACAATGATGCCTATCTaGTTCCCCCTGTATCCTCAAGGTCAACATAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: TRSSIKATMMPI*FPLYPQGQHSA Trigger: GGCACTATGTTGACCTTGAGGATACAGGGGGAACAAGATAGGCATCATTGTTGCCTTTATAGAGCTTCTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000558924.1 ENST00000559376.1 |
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| CDS CAA 90 bp | CCCTACCAAACTAGAAGCTCTATAAAGGCAACAATGATGCCTATCTaGTTCCCCCTGTATCCTCAAGGTCAACATAGTGCCTTACACATA | + |
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Preference number: 6 (lower is better) Translates to: PYQTRSSIKATMMPI*FPLYPQGQHSALHI Trigger: TATGTGTAAGGCACTATGTTGACCTTGAGGATACAGGGGGAACAAGATAGGCATCATTGTTGCCTTTATAGAGCTTCTAGTTTGGTAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000558924.1 ENST00000559376.1 |
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| CDS CAA 90 bp | GCAAACCAGTCTCAACTCCCATCTTCCTTTCCATCTTGGCAGCATTaGACTTTCATGACCACAAATATGCTCTGGAAATTCCTCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ANQSQLPSSFPSWQH*TFMTTNMLWKFLLL Trigger: AAGAAGGAGGAATTTCCAGAGCATATTTGTGGTCATGAAAGTCAAATGCTGCCAAGATGGAAAGGAAGATGGGAGTTGAGACTGGTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558924.1 ENST00000559376.1 |
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| CDS TCA 72 bp | TTCCAATATAAGGAACAAATAATTCCTGTCCTCCACTaGACTGTTCTCCTGATAAAATCCCCTGGCTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: FQYKEQIIPVLH*TVLLIKSPGSP Trigger: GGGAGAGCCAGGGGATTTTATCAGGAGAACAGTTCAGTGGAGGACAGGAATTATTTGTTCCTTATATTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560266.5 |
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| CDS TCA 72 bp | TTACACATAGGAGATATCCAGTACATCCTGCCTGATTaGATGTCTGAATGTCCGGGCCTTTTCTTTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LHIGDIQYILPD*MSECPGLFFLL Trigger: AAGCAAAAAGAAAAGGCCCGGACATTCAGACATTCAATCAGGCAGGATGTACTGGATATCTCCTATGTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CCA 72 bp | AAATTAGCAGGGTACCATCGATGTGGGCGGAATAGGTaGTTAGCAAATGTAAAACTTTCTTCTTTATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KLAGYHRCGRNR*LANVKLSSLSS Trigger: GGAGGATAAAGAAGAAAGTTTTACATTTGCTAACCACCTATTCCGCCCACATCGATGGTACCCTGCTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558924.1 |
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| CDS CAA 72 bp | TCTCAACTCCCATCTTCCTTTCCATCTTGGCAGCATTaGACTTTCATGACCACAAATATGCTCTGGAAATTC | + |
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Preference number: 6 (lower is better) Translates to: SQLPSSFPSWQH*TFMTTNMLWKF Trigger: GAATTTCCAGAGCATATTTGTGGTCATGAAAGTCAAATGCTGCCAAGATGGAAAGGAAGATGGGAGTTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558924.1 ENST00000559376.1 |
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| CDS CCA 72 bp | CAATTCCAATATAAGGAACAAATATTAGCAGCATCTTaGGAACTGAGGAAGATGGGGACTAGTATTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QFQYKEQILAAS*ELRKMGTSISQ Trigger: CTGAGAAATACTAGTCCCCATCTTCCTCAGTTCCCAAGATGCTGCTAATATTTGTTCCTTATATTGGAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560409.5 |
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| CDS CAA 72 bp | TCAATTCACAAAGTCCATTTCTATATACTGCCCTATTaGATCCTTGCAAAAGCCCAAGTGATAGGAAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: SIHKVHFYILPY*ILAKAQVIGKL Trigger: TAACTTTCCTATCACTTGGGCTTTTGCAAGGATCAAATAGGGCAGTATATAGAAATGGACTTTGTGAATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558924.1 ENST00000559376.1 |
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