RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SDR42E1 (Homo sapiens)

Ensembl gene IDs: ENSG00000184860

Ensembl transcript IDs: ENST00000328945.7, ENST00000532128.5, ENST00000534209.1

Found 471 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGCCTTTGGAAACCACGGGGTAGGATCACCTGTACCCAGGAGTaGACTGTGGACATGGCACACCAGGACATGCTGCGATTCCTGGAG +
Preference number: 1 (lower is better)
Translates to: GCLWKPRGRITCTQE*TVDMAHQDMLRFLE
Trigger: CTCCAGGAATCGCAGCATGTCCTGGTGTGCCATGTCCACAGTCCACTCCTGGGTACAGGTGATCCTACCCCGTGGTTTCCAAAGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp AGCTACTTAGGAGGATCACCTGAGCCCAGGAGGGCACTGCAGCAGTaGGCTGTGTCCACAGTGCTACACTTCAGCCTGGTCGACAGAGTG +
Preference number: 1 (lower is better)
Translates to: SYLGGSPEPRRALQQ*AVSTVLHFSLVDRV
Trigger: CACTCTGTCGACCAGGCTGAAGTGTAGCACTGTGGACACAGCTCACTGCTGCAGTGCCCTCCTGGGCTCAGGTGATCCTCCTAAGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp AGGCCAGCCAGCAGGGGCACCAGTGGCCCTATAATGATGTCTAATTaGGTCAGAGCTGGGGCGTGGCATTCTGCAGGCAACTTCTACCCT +
Preference number: 1 (lower is better)
Translates to: RPASRGTSGPIMMSN*VRAGAWHSAGNFYP
Trigger: AGGGTAGAAGTTGCCTGCAGAATGCCACGCCCCAGCTCTGACCCAATTAGACATCATTATAGGGCCACTGGTGCCCCTGCTGGCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp CAAACATCATCAGCACTCGGTCCTCTCCTTCAGGTAGGAGGACCCTaGAGAGGAGCTGCACCAAGCGCCTGTCCTCCCCAGAGAAGCAAT +
Preference number: 1 (lower is better)
Translates to: QTSSALGPLLQVGGP*RGAAPSACPPQRSN
Trigger: ATTGCTTCTCTGGGGAGGACAGGCGCTTGGTGCAGCTCCTCTTCAGGGTCCTCCTACCTGAAGGAGAGGACCGAGTGCTGATGATGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp GGAGCTGCACCAAGCGCCTGTCCTCCCCAGAGAAGCAATCCTAGCTaGAAGGGTTTCTCTAAACCTGCTCTGGGAGAAAGGCTGAAAGGA +
Preference number: 1 (lower is better)
Translates to: GAAPSACPPQRSNPS*KGFSKPALGERLKG
Trigger: TCCTTTCAGCCTTTCTCCCAGAGCAGGTTTAGAGAAACCCTTTCAGCTAGGATTGCTTCTCTGGGGAGGACAGGCGCTTGGTGCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp TGCCACTTCCTAGCTGGTGACGCTGGGTACCCTTGGGCAAGGTACTaGATCTCCCTAAGCCTCAGTTTCCTCCCATGTAAACTGGAGATA +
Preference number: 1 (lower is better)
Translates to: CHFLAGDAGYPWARY*ISLSLSFLPCKLEI
Trigger: TATCTCCAGTTTACATGGGAGGAAACTGAGGCTTAGGGAGATGCAGTACCTTGCCCAAGGGTACCCAGCGTCACCAGCTAGGAAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp AACCACGGGGTAGGATCACCTGTACCCAGGAGTGGACTGTGGACATaGCACACCAGGACATGCTGCGATTCCTGGAGAAAAATCGAACTT +
Preference number: 1 (lower is better)
Translates to: NHGVGSPVPRSGLWT*HTRTCCDSWRKIEL
Trigger: AAGTTCGATTTTTCTCCAGGAATCGCAGCATGTCCTGGTGTGCCATGTCCACAGTCCACTCCTGGGTACAGGTGATCCTACCCCGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp TTTGGAAACCACGGGGTAGGATCACCTGTACCCAGGAGTGGACTGTaGACATGGCACACCAGGACATGCTGCGATTCCTGGAGAAAAATC +
Preference number: 1 (lower is better)
Translates to: FGNHGVGSPVPRSGL*TWHTRTCCDSWRKI
Trigger: GATTTTTCTCCAGGAATCGCAGCATGTCCTGGTGTGCCATGTCCACAGTCCACTCCTGGGTACAGGTGATCCTACCCCGTGGTTTCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp GCCATGGGTGAGGTAGCAGTGCTGGGTGGCTTCTGCCCAGACCTCTaGGAGCATCCCCAAGTGCACAAGTGTGAGCATAATTTTATTGTT +
Preference number: 1 (lower is better)
Translates to: AMGEVAVLGGFCPDL*EHPQVHKCEHNFIV
Trigger: AACAATAAAATTATGCTCACACTTGTGCACTTGGGGATGCTCTCAGAGGTCTGGGCAGAAGCCACCCAGCACTGCTACCTCACCCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp TTGGCGAGTCCCATCTCCCCCTTCATTCATTCAGCAAAGTTGTACTaGGCACCTGCTGTAGCAAAGCACTGCAAAGGGAAGAGCCAAGCA +
Preference number: 1 (lower is better)
Translates to: LASPISPFIHSAKLY*APAVAKHCKGKSQA
Trigger: TGCTTGGCTCTTCCCTTTGCAGTGCTTTGCTACAGCAGGTGCTCAGTACAACTTTGCTGAATGAATGAAGGGGGAGATGGGACTCGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp CAATGCAGCTTCCACCCTGCTGTCTTGGATGACCTGCTCTGGGGATaGGGATATTCAAGCAGTTCTAGAACAATACATGGCAGGTGCTCA +
Preference number: 1 (lower is better)
Translates to: QCSFHPAVLDDLLWG*GYSSSSRTIHGRCS
Trigger: TGAGCACCTGCCATGTATTGTTCTAGAACTGCTTGAATATCCTCATCCCCAGAGCAGGTCATCCAAGACAGCAGGGTGGAAGCTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp GGTTCCAATACAGGGCTCCTTGTTGCTCACACATCCTTCCTTCATTaGGACCCTCCATCAATCATATGGATAACCTCCCACACACTCCTC +
Preference number: 1 (lower is better)
Translates to: GSNTGLLVAHTSFLH*DPPSIIWITSHTLL
Trigger: GAGGAGTGTGTGGGAGGTTATCCATATGATTGATGGAGGGTCGCAATGAAGGAAGGATGTGTGAGCAACAAGGAGCCCTGTATTGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp TTTGGGGTGGGAGAGGATTATGAATTCCACTTTGGCTACACTGGCTaGCAGGTGCATGTGGGACATCCATGTGGAGTTGCAGAAGTACTT +
Preference number: 1 (lower is better)
Translates to: FGVGEDYEFHFGYTG*QVHVGHPCGVAEVL
Trigger: AAGTACTTCTGCAACTCCACATGGATGTCCCACATGCACCTGTCAGCCAGTGTAGCCAAAGTGGAATTCATAATCCTCTCCCACCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp TTGCACCTTTATAGAGTCTCTTGGCTAGGCATGTGGAGAATGGACTaGAGGAAGGAGGGTGTGGATATGGGTGGAAGAGCAAATGGGCTA +
Preference number: 1 (lower is better)
Translates to: LHLYRVSWLGMWRMD*RKEGVDMGGRANGL
Trigger: TAGCCCATTTGCTCTTCCACCCATATCCACACCCTCCTTCCTTCAGTCCATTCTCCACATGCCTAGCCAAGAGACTCTATAAAGGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp GCAGGGGAGGCAAAGAGCCATCAGCAGCGAATAATACTTGGGCTCTaGTCTCAAGATACTGATTTAGAGGAGAGACTAGGACATGTGCAA +
Preference number: 1 (lower is better)
Translates to: AGEAKSHQQRIILGL*SQDTDLEERLGHVQ
Trigger: TTGCACATGTCCTAGTCTCTCCTCTAAATCAGTATCTTGAGAGCAGAGCCCAAGTATTATTCGCTGCTGATGGCTCTTTGCCTCCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp GGACTCTGTCTTCTTTCCACTTGGGTTCCTATGCAACAGTGTAACTaGATCATCTGTAACAGTTTGTGGGTGGCCAGACAGTGCTGCCAT +
Preference number: 1 (lower is better)
Translates to: GLCLLSTWVPMQQCN*IICNSLWVARQCCH
Trigger: ATGGCAGCACTGTCTGGCCACCCACAAACTGTTACAGATGATCCAGTTACACTGTTGCATAGGAACCCAAGTGGAAAGAAGACAGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp TGCAGGCAACTTCTACCCTTTGTAAGGCTGGGCGAACCGGAGATTTaGAAAGCAATACAAGGTAGAAGCAGCCCCAACAATCTACGACAA +
Preference number: 1 (lower is better)
Translates to: CRQLLPFVRLGEPEI*KAIQGRSSPNNLRQ
Trigger: TTGTCGTAGATTGTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCTTACAAAGGGTAGAAGTTGCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp AAGTGCACAAGTGTGAGCATAATTTTATTGTTAGGCAGGGTTGAGTaGTTCAATCTAAGGTTGAGGCAAGGTGAGGGCAGCTGGGAACCC +
Preference number: 1 (lower is better)
Translates to: KCTSVSIILLLGRVE*FNLRLRQGEGSWEP
Trigger: GGGTTCCCAGCTGCCCTCACCTTGCCTCAACCTTAGATTGAATCACTCAACCCTGCCTAACAATAAAATTATGCTCACACTTGTGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp TGGGAGAGGATTATGAATTCCACTTTGGCTACACTGGCTGACAGGTaGATGTGGGACATCCATGTGGAGTTGCAGAAGTACTTAGATATG +
Preference number: 1 (lower is better)
Translates to: WERIMNSTLATLADR*MWDIHVELQKYLDM
Trigger: CATATCTAAGTACTTCTGCAACTCCACATGGATGTCCCACATGCACCTGTCAGCCAGTGTAGCCAAAGTGGAATTCATAATCCTCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp AGCAGTTTGGGCATTACCTTTAGGTTCCAATACAGGGCTCCTTGTTaGTCACACATCCTTCCTTCATTGCGACCCTCCATCAATCATATG +
Preference number: 1 (lower is better)
Translates to: SSLGITFRFQYRAPC*SHILPSLRPSINHM
Trigger: CATATGATTGATGGAGGGTCGCAATGAAGGAAGGATGTGTGAGCAACAAGGAGCCCTGTATTGGAACCTAAAGGTAATGCCCAAACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp GGCCAAGGAATGAGCACTGAGAAAATCTACCATTTCAAGCTGGAGTaGGAGACAGTAACAGAATTGGGGAGATATGGAAGCAGGAATGTG +
Preference number: 1 (lower is better)
Translates to: GQGMSTEKIYHFKLE*ETVTELGRYGSRNV
Trigger: CACATTCCTGCTTCCATATCTCCCCAATTCTGTTACTGTCTCCCACTCCAGCTTGAAATGGTAGATTTTCTCAGTGCTCATTCCTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp TGTAACTGGATCATCTGTAACAGTTTGTGGGTGGCCAGACAGTGCTaGCATTGTTCAATACATTCCTCATTGGAAGCTGTCTTCAGAGAG +
Preference number: 1 (lower is better)
Translates to: CNWIICNSLWVARQC*HCSIHSSLEAVFRE
Trigger: CTCTCTGAAGACAGCTTCCAATGAGGAATGTATTGAACAATGGCAGCACTGTCTGGCCACCCACAAACTGTTACAGATGATCCAGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp TGGGTTCCTATGCAACAGTGTAACTGGATCATCTGTAACAGTTTGTaGGTGGCCAGACAGTGCTGCCATTGTTCAATACATTCCTCATTG +
Preference number: 1 (lower is better)
Translates to: WVPMQQCNWIICNSL*VARQCCHCSIHSSL
Trigger: CAATGAGGAATGTATTGAACAATGGCAGCACTGTCTGGCCACCCACAAACTGTTACAGATGATCCAGTTACACTGTTGCATAGGAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp AGGATTATGAATTCCACTTTGGCTACACTGGCTGACAGGTGCATGTaGGACATCCATGTGGAGTTGCAGAAGTACTTAGATATGAGTCTG +
Preference number: 1 (lower is better)
Translates to: RIMNSTLATLADRCM*DIHVELQKYLDMSL
Trigger: CAGACTCATATCTAAGTACTTCTGCAACTCCACATGGATGTCCCACATGCACCTGTCAGCCAGTGTAGCCAAAGTGGAATTCATAATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp CAGATGGGAAAACAGCATTCATTGGACAAATACTTATTGAACTCCTaGACTGTGCCGGGCATTAGGAGTACAGCTGTAAGCAAGACAAAG +
Preference number: 1 (lower is better)
Translates to: QMGKQHSLDKYLLNS*TVPGIRSTAVSKTK
Trigger: CTTTGTCTTGCTTACAGCTGTACTCCTAATGCCCGGCACAGTGCAGGAGTTCAATAAGTATTTGTCCAATGAATGCTGTTTTCCCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp GCACCAGTGCTCACCTCCTTGTTGAAAGATAAGAAACACCTAGAGTaGAGATTACCAACCAACACAGACTTTCTCAATCAGAAGCATCAG +
Preference number: 1 (lower is better)
Translates to: APVLTSLLKDKKHLE*RLPTNTDFLNQKHQ
Trigger: CTGATGCTTCTGATTGAGAAAGTCTGTGTTGGTTGGTAATCTGCACTCTAGGTGTTTCTTATCTTTCAACAAGGAGGTGAGCACTGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp ACAGGCATAAGGAAGTGCAAGCAAATGCATGAGTCCCTTGAGCACTaGAGGGCTATAATCACCCACTACCAAATATTTCTTTTCCACTTG +
Preference number: 1 (lower is better)
Translates to: TGIRKCKQMHESLEH*RAIITHYQIFLFHL
Trigger: CAAGTGGAAAAGAAATATTTGGTAGTGGGTGATTATAGCCCTTCAGTGCTCAAGGGACTCATGCATTTGCTTGCACTTCCTTATGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp CCTTCTGGAGTCTGCATTTTTAATTTAGGCCTTGAATGTTCTTATTaGCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTGGG +
Preference number: 1 (lower is better)
Translates to: PSGVCIFNLGLECSY*LRLGVSGVKEAITG
Trigger: CCCAGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTCAAGGCCTAAATTAAAAATGCAGACTCCAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 90 bp CTGATAAATCCCCTGTTGGTTGAAAGACACTTGCCTGGATCACTTTaGTACATGCAATTTCTTTGTAGTGAACTAGATTTGGCCTCGGTC +
Preference number: 1 (lower is better)
Translates to: LINPLLVERHLPGSL*YMQFLCSELDLASV
Trigger: GACCGAGGCCAAATCTAGTTCACTACAAAGAAATTGCATGTAGCAAAGTGATCCAGGCAAGTGTCTTTCAACCAACAGGGGATTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp GTTCCTTGGTTAAGGCCACACACGATATTCACGGTGTTGGTATTATaGCATCAAGTTCAGAGCTTTTCTGAAAATATCCAGGCAGCATTC +
Preference number: 1 (lower is better)
Translates to: VPWLRPHTIFTVLVL*HQVQSFSENIQAAF
Trigger: GAATGCTGCCTGGATATTTTCAGAAAAGCTCTGAACTTGATGTCATAATACCAACACCGTGAATATCGTGTGTGGCCTTAACCAAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp GTATCATTCTCTAAAGTGAGATATGCTGGTGAACAGCACACAACCTaGTGTGCCATCTCTAAGCAAGAGATGCTGGTGAAGATTTTAATA +
Preference number: 1 (lower is better)
Translates to: VSFSKVRYAGEQHTT*CAISKQEMLVKILI
Trigger: TATTAAAATCTTCACCAGCATCTCTTGCTTAGAGATGGCACACCAGGTTGTGTGCTGTTCACCAGCATATCTCACTTTAGAGAATGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp TGTGACCAATATCAGTATTTGATTAGGTACACAAACAAGTCTTCCTaGAGGATGTCCTCTGGGCTATTAAGTATGGCTCTAACATCCATG +
Preference number: 1 (lower is better)
Translates to: CDQYQYLIRYTNKSS*RMSSGLLSMALTSM
Trigger: CATGGATGTTAGAGCCATACTTAATAGCCCAGAGGACATCCTCCAGGAAGACTTGTTTGTGTACCTAATCAAATACTGATATTGGTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp CCTAAACATCAAACATTACCATGTGTTCACATAGGCATAATGCCCTaGTATCATAAAGGGCAAAAGTTAACACCTAAAACGTACCCTGTG +
Preference number: 1 (lower is better)
Translates to: PKHQTLPCVHIGIMP*YHKGQKLTPKTYPV
Trigger: CACAGGGTACGTTTTAGGTGTTAACTTTTGCCCTTTATGATATCAGGGCATTATGCCTATGTGAACACATGGTAATGTTTGATGTTTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 90 bp AGAATATATACTAATATCAATAGATCACCATGCTGTACTATTGAGTaGGAAACCGTAGTAGCAGAAGGAACTGTGAGGTGGGAGACAGTA +
Preference number: 1 (lower is better)
Translates to: RIYTNINRSPCCTIE*ETVVAEGTVRWETV
Trigger: TACTGTCTCCCACCTCACAGTTCCTTCTGCTACTACGGTTTCTCACTCAATAGTACAGCATGGTGATCTATTGATATTAGTATATATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 90 bp ATGAACTCAAGTAATTATGAACGCAACTTGAGTTCAATGAGTTCCTaGTGTGCCCAGGTTCTAAAATACAGAAGGGTAACATGGTATGAA +
Preference number: 1 (lower is better)
Translates to: MNSSNYERNLSSMSS*CAQVLKYRRVTWYE
Trigger: TTCATACCATGTTACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTGCGTTCATAATTACTTGAGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACACTTGTTGCAGGCTCTaGGGGCACACCCAAAGACAT +
Preference number: 2 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNTCCRL*GHTQRH
Trigger: ATGTCTTTGGGTGTGCCCTCAGAGCCTGCAACAAGT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTATCCACCCTGCTGTCTTaGATGACCTGCTCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLSTLLS*MTCSGD
Trigger: ATCCCCAGAGCAGGTCATCCAAGACAGCAGGGTGGA...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 90 bp TTGGCTACACTGGCTGACAGGTGCATGTGGGACATCCATGTGGAGTaGCAGAAGTACTTAGATATGAGTCTGGAGCCCAGGAGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: LATLADRCMWDIHVE*QKYLDMSLEPRSGL
Trigger: CAGACCACTCCTGGGCTCCAGACTCATATCTAAGTACTTCTGCAACTCCACATGGATGTCCCACATGCACCTGTCAGCCAGTGTAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAATTTGGGCTGGGAGATaGAAATGGAGGCCATGGGCT +
Preference number: 2 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLIWAGR*KWRPWA
Trigger: AGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAAT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCAGAAAGGCCTGATGTaGCACCCCAGAGAGCTGTTC +
Preference number: 2 (lower is better)
Translates to: STYLGWEMKMEAMGLGELQKGLM*HPRELF
Trigger: GAACAGCTCTCTGGGGTGCCACATCAGGCCTTTCTG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 90 bp GAGCCCTGTAAGAATTTGGGGTGGGAGAGGATTATGAATTCCACTTaGGCTACACTGGCTGACAGGTGCATGTGGGACATCCATGTGGAG +
Preference number: 2 (lower is better)
Translates to: EPCKNLGWERIMNST*ATLADRCMWDIHVE
Trigger: CTCCACATGGATGTCCCACATGCACCTGTCAGCCAGTGTAGCCAAAGTGGAATTCATAATCCTCTCCCACCCCAAATTCTTACAGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACAACAGGGCCAAGGAATaGGCACTGAGAAAATCTACC +
Preference number: 2 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNNRAKE*ALRKST
Trigger: GGTAGATTTTCTCAGTGCTCATTCCTTGGCCCTGTT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTCTCAGAAGCCATGGGTaGGGTAGCAGTGCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGLRSHG*GSSAGW
Trigger: CCACCCAGCACTGCTACCTCACCCATGGCTTCTGAG...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTATACAAAGGGCAAATaGAGTCAGTCCCAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNYTKGK*SQSQLP
Trigger: TGGGAGCTGGGACTGACTGCATTTGCCCTTTGTATA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCATGGAAAAGGAAGGATaGCTCACATCGGGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: STYLGWEMKMEAMGLGELMEKEG*LTSGQE
Trigger: CTCTTGGCCCGATGTGAGTCATCCTTCCTTTTCCAT...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAGAGGAGCAGGGAGCCTaGGAAGCTTGGAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEEEQGA*EAWSPG
Trigger: TCCTGGGCTCCAAGCTTCTCAGGCTCCCTGCTCCTC...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACCCATCGTGGCCCAATaGCTGCGGCCGAAGGATGGA +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEPIVAQ*LRPKDG
Trigger: TCCATCCTTCGGCCGCAGTCATTGGGCCACGATGGG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTTCGTGGCCCAATGACTaGGGCCGAAGGATGGAAGTC +
Preference number: 2 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGSWPND*GRRMEV
Trigger: GACTTCCATCCTTCGGCCGCAGTCATTGGGCCACGA...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCGTAACAGTTTGTGGGTaGCCAGACAGTGCTGCCATT +
Preference number: 2 (lower is better)
Translates to: STYLGWEMKMEAMGLGELVTVCG*PDSAAI
Trigger: AATGGCAGCACTGTCTGGCCACCCACAAACTGTTAC...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACGTGGGCAACGTTTCATaGAAAAGGAAGGATGACTCA +
Preference number: 2 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNVGNVS*KRKDDS
Trigger: TGAGTCATCCTTCCTTTTCCATGAAACGTTGCCCAC...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACAGCAGAAGCTCACAGTaGAGAACTTACCTCAGAGAT +
Preference number: 2 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNSRSSQ*RTYLRD
Trigger: ATCTCTGAGGTAAGTTCTCCACTGTGAGCTTCTGCT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACCCTCCATCAATCATATaGATAACCTCCCACACACTC +
Preference number: 2 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNPPSII*ITSHTL
Trigger: GAGTGTGTGGGAGGTTATCCATATGATTGATGGAGG...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTATGTGGCTTTTGTGAGTaGACTGCAATAAGACTCAGG +
Preference number: 2 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLCGFCE*TAIRLR
Trigger: CCTGAGTCTTATTGCAGTTCACTCACAAAAGCCACA...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTTTCTGCCCAGACCTCTaGGAGCATCCCCAAGTGCAC +
Preference number: 2 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITFCPDL*EHPQVH
Trigger: GTGCACTTGGGGATGCTCTCAGAGGTCTGGGCAGAA...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCTATCCTTTCTGTAGCTaGAGCCATGGACAGACATGG +
Preference number: 2 (lower is better)
Translates to: STYLGWEMKMEAMGLGELYPFCS*SHGQTW
Trigger: CCATGTCTGTCCATGGCTCCAGCTACAGAAAGGATA...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAAGTACATATTTGGGCTaGGAGATGAAAATGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLSTYLG*EMKMEA
Trigger: GGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAAGGTTGAGGCAAGGTaGGGGCAGCTGGGAACCCTA +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEKVEAR*GQLGTL
Trigger: TAGGGTTCCCAGCTGCCCTCACCTTGCCTCAACCTT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAGGATGGAAGTCCTGTaGGCGGTCAGGCCTGCATGT +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMERMEVL*AVRPAC
Trigger: ACATGCAGGCCTGACCGCTCACAGGACTTCCATCCT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATACACTGGCTGACAGGTaGATGTGGGACATCCATGTG +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDTLADR*MWDIHV
Trigger: CACATGGATGTCCCACATGCACCTGTCAGCCAGTGT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATTGGGGCGTGGCATTCTaGAGGCAACTTCTACCCTTT +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDWGVAF*RQLLPF
Trigger: AAAGGGTAGAAGTTGCCTGCAGAATGCCACGCCCCA...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCGGATCTGGGCCAATTTaGTGTTTTTCACACGCATTC +
Preference number: 2 (lower is better)
Translates to: STYLGWEMKMEAMGLGELGSGPI*CFSHAF
Trigger: GAATGCGTGTGAAAAACACCAAATTGGCCCAGATCC...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTAGCCAGGTTCCACGTTaGCCTCCAATGACACCACCT +
Preference number: 2 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITSQVPR*PPMTPP
Trigger: AGGTGGTGTCATTGGAGGCCAACGTGGAACCTGGCT...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTGTAAGAATTTGGGGTaGGAGAGGATTATGAATTCC +
Preference number: 2 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNCKNLG*ERIMNS
Trigger: GGAATTCATAATCCTCTCCCACCCCAAATTCTTACA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTTGGAGAGGCTGCCTTTaGAAACCACGGGGTAGGATC +
Preference number: 2 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITWRGCL*KPRGRI
Trigger: GATCCTACCCCGTGGTTTCCAAAGGCAGCCTCTCCA...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAAAAATGGCATCAGCTTaGTTGACTCCCTTAATCATC +
Preference number: 2 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLKMASA*LTPLII
Trigger: GATGATTAAGGGAGTCAATCAAGCTGATGCCATTTT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACAGATCATATAGACAATaGCTTCCCTTACTCACTAGA +
Preference number: 2 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNRSYRQ*LPLLTR
Trigger: TCTAGTGAGTAAGGGAAGTCATTGTCTATATGATCT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAGGTGGAGGTTGCAGTaGGCTGAGATCACGCCATTG +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMERWRLQ*AEITPL
Trigger: CAATGGCGTGATCTCAGCTCACTGCAACCTCCACCT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAGTTCGAGCCAACAGTaGGCCATGACTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMESSSQQ*AMTVPL
Trigger: CAGTGGCACAGTCATGGCTCACTGTTGGCTCGAACT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTCTGTGGAAACGACAGTaGATGGCTGTGGCTGTGAGT +
Preference number: 2 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITLWKRQ*MAVAVS
Trigger: ACTCACAGCCACAGCCATGCACTGTCGTTTCCACAG...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATTCTGGAGCCCAGGAGTaGTCTGGAACTGTACATCTA +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDSGAQE*SGTVHL
Trigger: TAGATGTACAGTTCCAGACCACTCCTGGGCTCCAGA...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 90 bp ACTTGGGTTCCTATGCAACAGTGTAACTGGATCATCTGTAACAGTTaGTGGGTGGCCAGACAGTGCTGCCATTGTTCAATACATTCCTCA +
Preference number: 2 (lower is better)
Translates to: TWVPMQQCNWIICNS*WVARQCCHCSIHSS
Trigger: TGAGGAATGTATTGAACAATGGCAGCACTGTCTGGCCACCCACAAACTGTTACAGATGATCCAGTTACACTGTTGCATAGGAACCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGCATCCCCTCGAGGATTaGTCTGTTAGGGATCTGGGC +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLHPLED*SVRDLG
Trigger: GCCCAGATCCCTAACAGAGCAATCCTCGAGGGGATG...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTAGCCATGGACAGACATaGACTCTGTCTTCTTTCCAC +
Preference number: 2 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGSHGQT*TLSSFH
Trigger: GTGGAAAGAAGACAGAGTCCATGTCTGTCCATGGCT...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTTTCCCTTTTTGCAGGTaGGAGCAGTTTGGGCATTAC +
Preference number: 2 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGFPFCR*EQFGHY
Trigger: GTAATGCCCAAACTGCTCCCACCTGCAAAAAGGGAA...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGGGGCACAGAGGTGAGTaGAGAGGCTGCCTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLGHRGE*RGCLWK
Trigger: TTTCCAAAGGCAGCCTCTCCACTCACCTCTGTGCCC...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATACAATACATGGCAGGTaGTCATATGCGTTAACCCCA +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDTIHGR*SYALTP
Trigger: TGGGGTTAACGCATATGAGCACCTGCCATGTATTGT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAATGTTCCCAGTACCACTaGCAGCTTGAATGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMECSQYH*QLEWKG
Trigger: CCCTTTCCATTCAAGCTGGCAGTGGTACTGGGAACA...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTACCCTATGGGGTGGGTaGGTTTATACAAAGGGCAAA +
Preference number: 2 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITTLWGG*VYTKGK
Trigger: TTTGCCCTTTGTATAAACCCACCCACCCCATAGGGT...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAAACACCCGAGACTGTaGAAACGACAGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEKHPRL*KRQCMA
Trigger: AGCCATGCACTGTCGTTTCCACAGTCTCGGGTGTTT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACCCAGATCTCTGGGATaGGAAATTCAGCAGGTAGTG +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEPRSLG*EIQQVV
Trigger: CACTACCTGCTGAATTTCCCATCCCAGAGATCTGGG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTTCTATGGCTCCAAACTaGCTTCTATTGTACCCACCT +
Preference number: 2 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITSMAPN*LLLYPP
Trigger: AGGTGGGTACAATAGAAGTCAGTTTGGAGCCATAGA...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCATCAGATTTTTAGTTaGTTCATTGTGGCCTTCTTA +
Preference number: 2 (lower is better)
Translates to: STYLGWEMKMEAMGLGELHQIFS*FIVAFL
Trigger: TAAGAAGGCCACAATGAAGCAACTAAAAATCTGATG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGTGGCAGGTGCTCATATaGGTTAACCCCAGGCTAATG +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLWQVLI*VNPRLM
Trigger: CATTAGCCTGGGGTTAACGCATATGAGCACCTGCCA...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAGTCATAAAGGACAATaGAGCTTCCACCCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMESHKGQ*SFHPAV
Trigger: GACAGCAGGGTGGAAGCTGCATTGTCCTTTATGACT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATACATCCTTCCTTCATTaGGACCCTCCATCAATCATA +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDTSFLH*DPPSII
Trigger: TATGATTGATGGAGGGTCGCAATGAAGGAAGGATGT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGATCTGTAACAGTTTGTaGGTGGCCAGACAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLICNSL*VARQCC
Trigger: GCAGCACTGTCTGGCCACCCACAAACTGTTACAGAT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTCATCTCAGCCAACTGTaGTCACCTTATTTCTGGCCC +
Preference number: 2 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSHLSQL*SPYFWP
Trigger: GGGCCAGAAATAAGGTGATCACAGTTGGCTGAGATG...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACTAAAACGTACCCTGTaGATAGCTAATGCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMELKRTL*IANASP
Trigger: TGGAGAGGCATTAGCTATTCACAGGGTACGTTTTAG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTATAGGCATAATGCCCTaGTATCATAAAGGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGIGIMP*YHKGQK
Trigger: CTTTTGCCCTTTATGATATCAGGGCATTATGCCTAT...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATACGGTGTTGGTATTATaGCATCAAGTTCAGAGCTTT +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDTVLVL*HQVQSF
Trigger: AAAGCTCTGAACTTGATGTCATAATACCAACACCGT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATGAAGGCAGAATAATGTaGGATGAAGTTAGAGAGACA +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDEGRIM*DEVRET
Trigger: TGTCTCTCTAACTTCATCTCACATTATTCTGCCTTC...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGTCAGCAAAGTTGTACTaGGCACCTGCTGTAGCAAAG +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLSAKLY*APAVAK
Trigger: CTTTGCTACAGCAGGTGCTCAGTACAACTTTGCTGA...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATGAGTTTGAACTACTCTaGTTAAAGGTATGTTGGTGC +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDEFELL*LKVCWC
Trigger: GCACCAACATACCTTTAAGCAGAGTAGTTCAAACTC...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATCTAAGCCTACTTCTATaGCTCCAAACTGACTTCTAT +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDLSLLL*LQTDFY
Trigger: ATAGAAGTCAGTTTGGAGCCATAGAAGTAGGCTTAG...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAGTTCTAGTGTAGGTTaGCTATTTTCCCCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMESSSVG*LFSPVS
Trigger: GGAGACTGGGGAAAATAGCCAACCTACACTAGAACT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGTTACTGCTTGTAATGTaGCACTGTCTGCCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLLLLVM*HCLPLS
Trigger: TGACAGGGGCAGACAGTGCCACATTACAAGCAGTAA...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAACTTTCACCACATCTTaGTTTATGCTCCCAGTGAAC +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMETFTTS*FMLPVN
Trigger: GTTCACTGGGAGCATAAAGCAAGATGTGGTGAAAGT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGGAGAGCATCCCCAAGTaGACAAGTGTGAGCATAATT +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLESIPK*TSVSII
Trigger: AATTATGCTCACACTTGTGCACTTGGGGATGCTCTC...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGGCTCTGTTAGGGATCTaGGCCAATTTGGTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLALLGI*ANLVFF
Trigger: GAAAAACACCAAATTGGCCCAGATCCCTAACAGAGC...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATATGCAACAGTGTAACTaGATCATCTGTAACAGTTTG +
Preference number: 2 (lower is better)
Translates to: CYSERTDSRASYSAVLHDMQQCN*IICNSL
Trigger: CAAACTGTTACAGATGATCCAGTTACACTGTTGCAT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTTCAACAAGCATTTATTaGGCATATGAAGGGTACAGA +
Preference number: 2 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGSTSIY*AYEGYR
Trigger: TCTGTACCCTTCATATGCCCAATAAATGCTTGTTGA...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGGAAATATGGCTCCACTaGGAGGCTAGAGCAAAAGAT +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLEIWLH*EARAKD
Trigger: ATCTTTTGCTCTAGCCTCCCAGTGGAGCCATATTTC...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 90 bp CATTGCGAATTACTGCTGATAAATCCCCTGTTGGTTGAAAGACACTaGCCTGGATCACTTTGCTACATGCAATTTCTTTGTAGTGAACTA +
Preference number: 2 (lower is better)
Translates to: HCELLLINPLLVERH*PGSLCYMQFLCSEL
Trigger: TAGTTCACTACAAAGAAATTGCATGTAGCAAAGTGATCCAGGCAAGTGTCTTTCAACCAACAGGGGATTTATCAGCAGTAATTCGCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACCAAGGAATGAGCACTaGGAAAATCTACCATTTCAA +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEPRNEH*ENLPFQ
Trigger: TTGAAATGGTAGATTTTCTCAGTGCTCATTCCTTGG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTGAGGTTTTAGGTAGATaGAGACTGCATAAAATGGAA +
Preference number: 2 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITEVLGR*RLHKME
Trigger: TTCCATTTTATGCAGTCTGCATCTACCTAAAACCTC...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGCACACCCAAAGACATTaGAGAAAGTCCAGTAGCAAT +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLHTQRH*RKSSSN
Trigger: ATTGCTACTGGACTTTCTGCAATGTCTTTGGGTGTG...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGAGTTCAATGAGTTCCTaGTGTGCCCAGGTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLSSMSS*CAQVLK
Trigger: TTTTAGAACCTGGGCACACCAGGAACTCATTGAACT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGTATAAATCAGTGGAGTaGGGGTGTTGTAATTGCCCA +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLYKSVE*GCCNCP
Trigger: TGGGCAATTACAACACCCCCACTCCACTGATTTATA...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGATTGTTAGGCAGGGTTaGGTGATTCAATCTAAGGTT +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLIVRQG*VIQSKV
Trigger: AACCTTAGATTGAATCACTCAACCCTGCCTAACAAT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTGCATTCCACAGGGATTaGTCATCTATTTGTATTTTA +
Preference number: 2 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITAFHRD*SSICIL
Trigger: TAAAATACAAATAGATGAGCAATCCCTGTGGAATGC...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTTGTCTTCTTTCCACTTaGGTTCCTATGCAACAGTGT +
Preference number: 2 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTCLLST*VPMQQC
Trigger: ACACTGTTGCATAGGAACCCAAGTGGAAAGAAGACA...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGAATGACACCACCTCCTaGTATTCATATCCTTGTGTA +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLNDTTS*YSYPCV
Trigger: TACACAAGGATATGAATACCAGGAGGTGGTGTCATT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGTTCATCCATAGCAGATaGGAAAACAGCATTCATTGG +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLFIHSR*ENSIHW
Trigger: CCAATGAATGCTGTTTTCCCATCTGCTATGGATGAA...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 90 bp GCTGTTAAAAATAAACATTGCGAATTACTGCTGATAAATCCCCTGTaGGTTGAAAGACACTTGCCTGGATCACTTTGCTACATGCAATTT +
Preference number: 2 (lower is better)
Translates to: AVKNKHCELLLINPL*VERHLPGSLCYMQF
Trigger: AAATTGCATGTAGCAAAGTGATCCAGGCAAGTGTCTTTCAACCAACAGGGGATTTATCAGCAGTAATTCGCAATGTTTATTTTTAACAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR TCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGGCAAAAGCTTCTTTATaGCAGAAAAGACTCCAAACA +
Preference number: 2 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLAKASL*QKRLQT
Trigger: TGTTTGGAGTCTTTTCTGTCATAAAGAAGCTTTTGC...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCGAGGAGCGCTTTGTATaGTTGAATTTAATCCTCAAA +
Preference number: 2 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGEERFV*LNLILK
Trigger: TTTGAGGATTAAATTCAAGCATACAAAGCGCTCCTC...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAGATCACTTTGCTACATaGAATTTCTTTGTAGTGAAC +
Preference number: 2 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEDHFAT*NFFVVN
Trigger: GTTCACTACAAAGAAATTGCATGTAGCAAAGTGATC...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTCGATATTCACGGTGTTaGTATTATGACATCAAGTTC +
Preference number: 2 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTRYSRC*YYDIKF
Trigger: GAACTTGATGTCATAATACCAACACCGTGAATATCG...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 90 bp CAATCCAAGAACCTATTCTTAAGTAGCAATTTGAAGAGCCAATGTTaGGCACCAGATATCACTGTACACATTTTAAAACCCATGTTTCTT +
Preference number: 2 (lower is better)
Translates to: QSKNLFLSSNLKSQC*APDITVHILKPMFL
Trigger: AAGAAACATGGGTTTTAAAATGTGTACAGTGATATCTGGTGCCAAACATTGGCTCTTCAAATTGCTACTTAAGAATAGGTTCTTGGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp CTGGCCCATCGTGGCCCAATGACTGCGGCCGAAGGATaGAAGTCCTGTGAGCGGTCAGGCCTGCATGTGGAG +
Preference number: 3 (lower is better)
Translates to: LAHRGPMTAAEG*KSCERSGLHVE
Trigger: CTCCACATGCAGGCCTGACCGCTCACAGGACTTCCATCCTTCGGCCGCAGTCATTGGGCCACGATGGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp GGAGGATCACCTGAGCCCAGGAGGGCACTGCAGCAGTaGGCTGTGTCCACAGTGCTACACTTCAGCCTGGTC +
Preference number: 3 (lower is better)
Translates to: GGSPEPRRALQQ*AVSTVLHFSLV
Trigger: GACCAGGCTGAAGTGTAGCACTGTGGACACAGCTCACTGCTGCAGTGCCCTCCTGGGCTCAGGTGATCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp TCCTCTCCTTCAGGTAGGAGGACCCTGAAGAGGAGCTaGACCAAGCGCCTGTCCTCCCCAGAGAAGCAATCC +
Preference number: 3 (lower is better)
Translates to: SSPSGRRTLKRS*TKRLSSPEKQS
Trigger: GGATTGCTTCTCTGGGGAGGACAGGCGCTTGGTGCAGCTCCTCTTCAGGGTCCTCCTACCTGAAGGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp CACGGGGTAGGATCACCTGTACCCAGGAGTGGACTGTaGACATGGCACACCAGGACATGCTGCGATTCCTGG +
Preference number: 3 (lower is better)
Translates to: HGVGSPVPRSGL*TWHTRTCCDSW
Trigger: CCAGGAATCGCAGCATGTCCTGGTGTGCCATGTCCACAGTCCACTCCTGGGTACAGGTGATCCTACCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp AGAAAGGCTGAAAGGATGACGCTGACTGGCCCATCGTaGCCCAATGACTGCGGCCGAAGGATGGAAGTCCTG +
Preference number: 3 (lower is better)
Translates to: RKAERMTLTGPS*PNDCGRRMEVL
Trigger: CAGGACTTCCATCCTTCGGCCGCAGTCATTGGGCCACGATGGGCCAGTCAGCGTCATCCTTTCAGCCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp TGGAAACCACGGGGTAGGATCACCTGTACCCAGGAGTaGACTGTGGACATGGCACACCAGGACATGCTGCGA +
Preference number: 3 (lower is better)
Translates to: WKPRGRITCTQE*TVDMAHQDMLR
Trigger: TCGCAGCATGTCCTGGTGTGCCATGTCCACAGTCCACTCCTGGGTACAGGTGATCCTACCCCGTGGTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp AGCAGGGGCACCAGTGGCCCTATAATGATGTCTAATTaGGTCAGAGCTGGGGCGTGGCATTCTGCAGGCAAC +
Preference number: 3 (lower is better)
Translates to: SRGTSGPIMMSN*VRAGAWHSAGN
Trigger: GTTGCCTGCAGAATGCCACGCCCCAGCTCTGACCCAATTAGACATCATTATAGGGCCACTGGTGCCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp GAGGTAGCAGTGCTGGGTGGCTTCTGCCCAGACCTCTaGGAGCATCCCCAAGTGCACAAGTGTGAGCATAAT +
Preference number: 3 (lower is better)
Translates to: EVAVLGGFCPDL*EHPQVHKCEHN
Trigger: ATTATGCTCACACTTGTGCACTTGGGGATGCTCTCAGAGGTCTGGGCAGAAGCCACCCAGCACTGCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp CCAAGCGCCTGTCCTCCCCAGAGAAGCAATCCTAGCTaGAAGGGTTTCTCTAAACCTGCTCTGGGAGAAAGG +
Preference number: 3 (lower is better)
Translates to: PSACPPQRSNPS*KGFSKPALGER
Trigger: CCTTTCTCCCAGAGCAGGTTTAGAGAAACCCTTTCAGCTAGGATTGCTTCTCTGGGGAGGACAGGCGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp GTAGGATCACCTGTACCCAGGAGTGGACTGTGGACATaGCACACCAGGACATGCTGCGATTCCTGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: VGSPVPRSGLWT*HTRTCCDSWRK
Trigger: TTTTCTCCAGGAATCGCAGCATGTCCTGGTGTGCCATGTCCACAGTCCACTCCTGGGTACAGGTGATCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACGCAGGTGGGAGCAGTTaGGGCATTACCTTTAGGTTC +
Preference number: 3 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNAGGSS*GITFRF
Trigger: GAACCTAAAGGTAATGCCCAAACTGCTCCCACCTGC...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp TGTGGCACTGTCTGCCCCTGTCACCAGAAACGGCACTaGGGACATCCAAGAAGTATTTCCAACAGGCTTTCC +
Preference number: 3 (lower is better)
Translates to: CGTVCPCHQKRH*GHPRSISNRLS
Trigger: GGAAAGCCTGTTGGAAATACTTCTTGGATGTCCTCAGTGCCGTTTCTGGTGACAGGGGCAGACAGTGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp ACCCTATGGGGTGGGTGGGTTTATACAAAGGGCAAATaGAGTCAGTCCCAGCTCCCAAGTGAGGAAGCTAAG +
Preference number: 3 (lower is better)
Translates to: TLWGGWVYTKGK*SQSQLPSEEAK
Trigger: CTTAGCTTCCTCACTTGGGAGCTGGGACTGACTGCATTTGCCCTTTGTATAAACCCACCCACCCCATAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp GCCACCATCCCCTCGAGGATTGCTCTGTTAGGGATCTaGGCCAATTTGGTGTTTTTCACACGCATTCAAGCC +
Preference number: 3 (lower is better)
Translates to: ATIPSRIALLGI*ANLVFFTRIQA
Trigger: GGCTTGAATGCGTGTGAAAAACACCAAATTGGCCCAGATCCCTAACAGAGCAATCCTCGAGGGGATGGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp GCTGGAGTGGGAGACAGTAACAGAATTGGGGAGATATaGAAGCAGGAATGTGGTAGCCAGGTTCCACGTTGG +
Preference number: 3 (lower is better)
Translates to: AGVGDSNRIGEI*KQECGSQVPRW
Trigger: CCAACGTGGAACCTGGCTACCACATTCCTGCTTCCATATCTCCCCAATTCTGTTACTGTCTCCCACTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTCGAATCCAAGGCCCTTaGGCGAGTCCCATCTCCCCC +
Preference number: 3 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGRIQGP*ASPISP
Trigger: GGGGGAGATGGGACTCGCCAAAGGGCCTTGGATTCG...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp GGGAGCCCTGTAAGAATTTGGGGTGGGAGAGGATTATaGATTCCACTTTGGCTACACTGGCTGACAGGTGCA +
Preference number: 3 (lower is better)
Translates to: GSPVRIWGGRGL*IPLWLHWLTGA
Trigger: TGCACCTGTCAGCCAGTGTAGCCAAAGTGGAATTCATAATCCTCTCCCACCCCAAATTCTTACAGGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp TGCCTCTCCAGCAATAGCCACCATCCCCTCGAGGATTaGTCTGTTAGGGATCTGGGCCAATTTGGTGTTTTT +
Preference number: 3 (lower is better)
Translates to: CLSSNSHHPLED*SVRDLGQFGVF
Trigger: AAAAACACCAAATTGGCCCAGATCCCTAACAGAGCAATCCTCGAGGGGATGGTGGCTATTGCTGGAGAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp CCCAGGAGTGGACTGTGGACATGGCACACCAGGACATaGTGCGATTCCTGGAGAAAAATCGAACTTAAAGGA +
Preference number: 3 (lower is better)
Translates to: PRSGLWTWHTRT*CDSWRKIELKG
Trigger: TCCTTTAAGTTCGATTTTTCTCCAGGAATCGCAGCATGTCCTGGTGTGCCATGTCCACAGTCCACTCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp CAGACCGCTCTTCCCTTTTTGCAGGTGGGAGCAGTTTaGGCATTACCTTTAGGTTCCAATACAGGGCTCCTT +
Preference number: 3 (lower is better)
Translates to: QTALPFLQVGAV*ALPLGSNTGLL
Trigger: AAGGAGCCCTGTATTGGAACCTAAAGGTAATGCCCAAACTGCTCCCACCTGCAAAAAGGGAAGAGCGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp GGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTaGGCTCACCTAGGGAGAAAGTATGGTATTAGAACA +
Preference number: 3 (lower is better)
Translates to: GLGDENGGHGLR*AHLGRKYGIRT
Trigger: TGTTCTAATACCATACTTTCTCCCTAGGTGAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp GGAGAGGATTATGAATTCCACTTTGGCTACACTGGCTaGCAGGTGCATGTGGGACATCCATGTGGAGTTGCA +
Preference number: 3 (lower is better)
Translates to: GEDYEFHFGYTG*QVHVGHPCGVA
Trigger: TGCAACTCCACATGGATGTCCCACATGCACCTGTCAGCCAGTGTAGCCAAAGTGGAATTCATAATCCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp GACAATGCAGCTTCCACCCTGCTGTCTTGGATGACCTaGTCTGGGGATGAGGATATTCAAGCAGTTCTAGAA +
Preference number: 3 (lower is better)
Translates to: DNAASTLLSWMT*SGDEDIQAVLE
Trigger: TTCTAGAACTGCTTGAATATCCTCATCCCCAGAGCAGGTCATCCAAGACAGCAGGGTGGAAGCTGCATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp GTGGCTTCTGCCCAGACCTCTGAGAGCATCCCCAAGTaGACAAGTGTGAGCATAATTTTATTGTTAGGCAGG +
Preference number: 3 (lower is better)
Translates to: VASAQTSESIPK*TSVSIILLLGR
Trigger: CCTGCCTAACAATAAAATTATGCTCACACTTGTGCACTTGGGGATGCTCTCAGAGGTCTGGGCAGAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp ACAGGGCTCCTTGTTGCTCACACATCCTTCCTTCATTaGGACCCTCCATCAATCATATGGATAACCTCCCAC +
Preference number: 3 (lower is better)
Translates to: TGLLVAHTSFLH*DPPSIIWITSH
Trigger: GTGGGAGGTTATCCATATGATTGATGGAGGGTCGCAATGAAGGAAGGATGTGTGAGCAACAAGGAGCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp AGGAGTGGACTGTGGACATGGCACACCAGGACATGCTaGGATTCCTGGAGAAAAATCGAACTTAAAGGACCT +
Preference number: 3 (lower is better)
Translates to: RSGLWTWHTRTC*DSWRKIELKGP
Trigger: AGGTCCTTTAAGTTCGATTTTTCTCCAGGAATCGCAGCATGTCCTGGTGTGCCATGTCCACAGTCCACTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp GTATTGTCCCTTGGCAGTCTGAGCAGAAGCTCACAGTaGAGAACTTACCTCAGAGATTTGTGGGTGTGGCTT +
Preference number: 3 (lower is better)
Translates to: VLSLGSLSRSSQ*RTYLRDLWVWL
Trigger: AAGCCACACCCACAAATCTCTGAGGTAAGTTCTCCACTGTGAGCTTCTGCTCAGACTGCCAAGGGACAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp ATATGGAAGCAGGAATGTGGTAGCCAGGTTCCACGTTaGCCTCCAATGACACCACCTCCTGGTATTCATATC +
Preference number: 3 (lower is better)
Translates to: IWKQECGSQVPR*PPMTPPPGIHI
Trigger: GATATGAATACCAGGAGGTGGTGTCATTGGAGGCCAACGTGGAACCTGGCTACCACATTCCTGCTTCCATAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp GAGAATGGACTGAAGGAAGGAGGGTGTGGATATGGGTaGAAGAGCAAATGGGCTACTAGTGGAATCTATGGG +
Preference number: 3 (lower is better)
Translates to: ENGLKEGGCGYG*KSKWATSGIYG
Trigger: CCCATAGATTCCACTAGTAGCCCATTTGCTCTTCCACCCATATCCACACCCTCCTTCCTTCAGTCCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp ACATCCTTCCTTCATTGCGACCCTCCATCAATCATATaGATAACCTCCCACACACTCCTCAGAAGCCATGGG +
Preference number: 3 (lower is better)
Translates to: TSFLHCDPPSII*ITSHTLLRSHG
Trigger: CCCATGGCTTCTGAGGAGTGTGTGGGAGGTTATCCATATGATTGATGGAGGGTCGCAATGAAGGAAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCGAGACAGTAACAGAATaGGGGAGATATGGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: STYLGWEMKMEAMGLGELETVTE*GRYGSR
Trigger: CCTGCTTCCATATCTCCCCAATTCTGTTACTGTCTC...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACGACATCCATGTGGAGTaGCAGAAGTACTTAGATATG +
Preference number: 3 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNDIHVE*QKYLDM
Trigger: CATATCTAAGTACTTCTGCAACTCCACATGGATGTC...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATACCGCTCTTCCCTTTTaGCAGGTGGGAGCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: CYSERTDSRASYSAVLHDTALPF*QVGAVW
Trigger: CCAAACTGCTCCCACCTGCAAAAAGGGAAGAGCGGT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp GAAGTACTTTCACCACATCTTGCTTTATGCTCCCAGTaGACCCTATGGGGTGGGTGGGTTTATACAAAGGGC +
Preference number: 3 (lower is better)
Translates to: EVLSPHLALCSQ*TLWGGWVYTKG
Trigger: GCCCTTTGTATAAACCCACCCACCCCATAGGGTTCACTGGGAGCATAAAGCAAGATGTGGTGAAAGTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp TTCCACCCTGCTGTCTTGGATGACCTGCTCTGGGGATaGGGATATTCAAGCAGTTCTAGAACAATACATGGC +
Preference number: 3 (lower is better)
Translates to: FHPAVLDDLLWG*GYSSSSRTIHG
Trigger: GCCATGTATTGTTCTAGAACTGCTTGAATATCCTCATCCCCAGAGCAGGTCATCCAAGACAGCAGGGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp ACATCTTGCTTTATGCTCCCAGTGAACCCTATGGGGTaGGTGGGTTTATACAAAGGGCAAATGCAGTCAGTC +
Preference number: 3 (lower is better)
Translates to: TSCFMLPVNPMG*VGLYKGQMQSV
Trigger: GACTGACTGCATTTGCCCTTTGTATAAACCCACCCACCCCATAGGGTTCACTGGGAGCATAAAGCAAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp AAGGAAGGAGGGTGTGGATATGGGTGGAAGAGCAAATaGGCTACTAGTGGAATCTATGGGAGAGAAGGTACA +
Preference number: 3 (lower is better)
Translates to: KEGGCGYGWKSK*ATSGIYGREGT
Trigger: TGTACCTTCTCTCCCATAGATTCCACTAGTAGCCCATTTGCTCTTCCACCCATATCCACACCCTCCTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACAATACGGAAATACCTTaGTGTATTTCCTTCCCCTAC +
Preference number: 3 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNNTEIP*CISFPY
Trigger: GTAGGGGAAGGAAATACACAAAGGTATTTCCGTATT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATATCCAAATACACTTGTaGCAGGCTCTGAGGGCACAC +
Preference number: 3 (lower is better)
Translates to: CYSERTDSRASYSAVLHDIQIHL*QALRAH
Trigger: GTGTGCCCTCAGAGCCTGCAACAAGTGTATTTGGAT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGTTCCACCCTGCTGTCTaGGATGACCTGCTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLFHPAV*DDLLWG
Trigger: TCCCCAGAGCAGGTCATCCAAGACAGCAGGGTGGAA...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTAAAGACGACCCCCGTTaGAAAGAAAGAGGGCACAGA +
Preference number: 3 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGKDDPR*KERGHR
Trigger: TCTGTGCCCTCTTTCTTTCAAACGGGGGTCGTCTTT...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp CTGGTATTCATATCCTTGTGTAGTCTCCTCCCACACTaGATACGGCTAACCTGTGTAAACACCCGAGACTGT +
Preference number: 3 (lower is better)
Translates to: LVFISLCSLLPH*IRLTCVNTRDC
Trigger: ACAGTCTCGGGTGTTTACACAGGTTAGCCGTATTCAGTGTGGGAGGAGACTACACAAGGATATGAATACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp ATTATGAATTCCACTTTGGCTACACTGGCTGACAGGTaGATGTGGGACATCCATGTGGAGTTGCAGAAGTAC +
Preference number: 3 (lower is better)
Translates to: IMNSTLATLADR*MWDIHVELQKY
Trigger: GTACTTCTGCAACTCCACATGGATGTCCCACATGCACCTGTCAGCCAGTGTAGCCAAAGTGGAATTCATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp CCAGACAGTGCTGCCATTGTTCAATACATTCCTCATTaGAAGCTGTCTTCAGAGAGCCAATCTTCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: PDSAAIVQYIPH*KLSSESQSSSQ
Trigger: CTGGGAAGAAGATTGGCTCTCTGAAGACAGCTTCCAATGAGGAATGTATTGAACAATGGCAGCACTGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp CTTCTTTCCACTTGGGTTCCTATGCAACAGTGTAACTaGATCATCTGTAACAGTTTGTGGGTGGCCAGACAG +
Preference number: 3 (lower is better)
Translates to: LLSTWVPMQQCN*IICNSLWVARQ
Trigger: CTGTCTGGCCACCCACAAACTGTTACAGATGATCCAGTTACACTGTTGCATAGGAACCCAAGTGGAAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp CCCCTTGTAATGTTCCCATACTATCCTTTCTGTAGCTaGAGCCATGGACAGACATGGACTCTGTCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: PLVMFPYYPFCS*SHGQTWTLSSF
Trigger: GAAAGAAGACAGAGTCCATGTCTGTCCATGGCTCCAGCTACAGAAAGGATAGTATGGGAACATTACAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp AAAAGCTTTGTAGCTGGAAATGTGGGCAACGTTTCATaGAAAAGGAAGGATGACTCACATCGGGCCAAGAGC +
Preference number: 3 (lower is better)
Translates to: KSFVAGNVGNVS*KRKDDSHRAKS
Trigger: GCTCTTGGCCCGATGTGAGTCATCCTTCCTTTTCCATGAAACGTTGCCCACATTTCCAGCTACAAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp GTCTGGAACTGTACATCTAGTAGTACATATTTGGGCTaGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAG +
Preference number: 3 (lower is better)
Translates to: VWNCTSSSTYLG*EMKMEAMGLGE
Trigger: CTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACTACTAGATGTACAGTTCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp TCTAAAGTGAGATATGCTGGTGAACAGCACACAACCTaGTGTGCCATCTCTAAGCAAGAGATGCTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: SKVRYAGEQHTT*CAISKQEMLVK
Trigger: CTTCACCAGCATCTCTTGCTTAGAGATGGCACACCAGGTTGTGTGCTGTTCACCAGCATATCTCACTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAGAGCCTCTCAGCATCTaGCAAGGGAGCCAGTGTTTA +
Preference number: 3 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEEPLSI*QGSQCL
Trigger: TAAACACTGGCTCCCTTGCAAGATGCTGAGAGGCTC...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp GTAGCAGGAGCACCAATCTTAAATTGCTGGGATCAGTaGAGGCCTCTAGAAAGAGACTTAACAAGAGACACG +
Preference number: 3 (lower is better)
Translates to: VAGAPILNCWDQ*RPLERDLTRDT
Trigger: CGTGTCTCTTGTTAAGTCTCTTTCTAGAGGCCTTCACTGATCCCAGCAATTTAAGATTGGTGCTCCTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp TCACCAAAAAGGAGCATGGGGTATCATTCTCTAAAGTaGGATATGCTGGTGAACAGCACACAACCTGGTGTG +
Preference number: 3 (lower is better)
Translates to: SPKRSMGYHSLK*DMLVNSTQPGV
Trigger: CACACCAGGTTGTGTGCTGTTCACCAGCATATCTCACTTTAGAGAATGATACCCCATGCTCCTTTTTGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp CTTCATGTTGAACATTCCCAGAAGCTAAATCCCCTATaGAAGGCACAGGACTATAAATCAGTGGAGTGGGGG +
Preference number: 3 (lower is better)
Translates to: LHVEHSQKLNPL*KAQDYKSVEWG
Trigger: CCCCCACTCCACTGATTTATAGTCCTGTGCCTTTCATAGGGGATTTAGCTTCTGGGAATGTTCAACATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp ATCATCTGTAACAGTTTGTGGGTGGCCAGACAGTGCTaGCATTGTTCAATACATTCCTCATTGGAAGCTGTC +
Preference number: 3 (lower is better)
Translates to: IICNSLWVARQC*HCSIHSSLEAV
Trigger: GACAGCTTCCAATGAGGAATGTATTGAACAATGGCAGCACTGTCTGGCCACCCACAAACTGTTACAGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp TGGATCATCTGTAACAGTTTGTGGGTGGCCAGACAGTaGTGCCATTGTTCAATACATTCCTCATTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: WIICNSLWVARQ*CHCSIHSSLEA
Trigger: AGCTTCCAATGAGGAATGTATTGAACAATGGCAGCACTGTCTGGCCACCCACAAACTGTTACAGATGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp GCAAAGAGCCATCAGCAGCGAATAATACTTGGGCTCTaGTCTCAAGATACTGATTTAGAGGAGAGACTAGGA +
Preference number: 3 (lower is better)
Translates to: AKSHQQRIILGL*SQDTDLEERLG
Trigger: TCCTAGTCTCTCCTCTAAATCAGTATCTTGAGAGCAGAGCCCAAGTATTATTCGCTGCTGATGGCTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCGGAAATAAGTATATCTaGCCCTCTCAGAAATTCAAG +
Preference number: 3 (lower is better)
Translates to: STYLGWEMKMEAMGLGELGNKYI*PSQKFK
Trigger: CTTGAATTTCTGAGAGGGCAAGATATACTTATTTCC...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTAGTACCACTGCCAGCTaGAATGGAAAGGGATATAGT +
Preference number: 3 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGSTTAS*NGKGYS
Trigger: ACTATATCCCTTTCCATTCAAGCTGGCAGTGGTACT...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAGAGCCCTGTAAGAATTaGGGGTGGGAGAGGATTATG +
Preference number: 3 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEEPCKN*GWERIM
Trigger: CATAATCCTCTCCCACCCCAAATTCTTACAGGGCTC...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp AAGTATGGTATTAGAACAGGGCCAAGGAATGAGCACTaGGAAAATCTACCATTTCAAGCTGGAGTGGGAGAC +
Preference number: 3 (lower is better)
Translates to: KYGIRTGPRNEH*ENLPFQAGVGD
Trigger: GTCTCCCACTCCAGCTTGAAATGGTAGATTTTCTCAGTGCTCATTCCTTGGCCCTGTTCTAATACCATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp AGTGTGAGCATAATTTTATTGTTAGGCAGGGTTGAGTaGTTCAATCTAAGGTTGAGGCAAGGTGAGGGCAGC +
Preference number: 3 (lower is better)
Translates to: SVSIILLLGRVE*FNLRLRQGEGS
Trigger: GCTGCCCTCACCTTGCCTCAACCTTAGATTGAATCACTCAACCCTGCCTAACAATAAAATTATGCTCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp CAGCCTCCAAGATCGCCTTTGACCATCTCCCTCTTCTaGTATAATACGGAAATACCTTTGTGTATTTCCTTC +
Preference number: 3 (lower is better)
Translates to: QPPRSPLTISLF*YNTEIPLCISF
Trigger: GAAGGAAATACACAAAGGTATTTCCGTATTATACCAGAAGAGGGAGATGGTCAAAGGCGATCTTGGAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp GCAGAAGTACTTAGATATGAGTCTGGAGCCCAGGAGTaGTCTGGAACTGTACATCTAGTAGTACATATTTGG +
Preference number: 3 (lower is better)
Translates to: AEVLRYESGAQE*SGTVHLVVHIW
Trigger: CCAAATATGTACTACTAGATGTACAGTTCCAGACCACTCCTGGGCTCCAGACTCATATCTAAGTACTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATTTGAAGAGCCAATGTTaGGCACCAGATATCACTGTA +
Preference number: 3 (lower is better)
Translates to: CYSERTDSRASYSAVLHDLKSQC*APDITV
Trigger: TACAGTGATATCTGGTGCCAAACATTGGCTCTTCAA...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATTCAATACATTCCTCATaGGAAGCTGTCTTCAGAGAG +
Preference number: 3 (lower is better)
Translates to: CYSERTDSRASYSAVLHDSIHSS*EAVFRE
Trigger: CTCTCTGAAGACAGCTTCCAATGAGGAATGTATTGA...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp ACATTGCGAATTACTGCTGATAAATCCCCTGTTGGTTaGAAGACACTTGCCTGGATCACTTTGCTACATGCA +
Preference number: 3 (lower is better)
Translates to: TLRITADKSPVG*KTLAWITLLHA
Trigger: TGCATGTAGCAAAGTGATCCAGGCAAGTGTCTTTCAACCAACAGGGGATTTATCAGCAGTAATTCGCAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp GTTGCAATTTATATTAGAAGTACTTTCACCACATCTTaGTTTATGCTCCCAGTGAACCCTATGGGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: VAIYIRSTFTTS*FMLPVNPMGWV
Trigger: CACCCACCCCATAGGGTTCACTGGGAGCATAAAGCAAGATGTGGTGAAAGTACTTCTAATATAAATTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp AGATGGGCATCTCCAACTCAACTAAGCCTACTTCTATaGCTCCAAACTGACTTCTATTGTACCCACCTAAAA +
Preference number: 3 (lower is better)
Translates to: RWASPTQLSLLL*LQTDFYCTHLK
Trigger: TTTTAGGTGGGTACAATAGAAGTCAGTTTGGAGCCATAGAAGTAGGCTTAGTTGAGTTGGAGATGCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp AGACATGGTTCCTGCTCTCATGGGGCGTTTATGTTCTaGGGAGCAAATCACTTCATCAAACAATTTCCATAT +
Preference number: 3 (lower is better)
Translates to: RHGSCSHGAFMF*GANHFIKQFPY
Trigger: ATATGGAAATTGTTTGATGAAGTGATTTGCTCCCCAGAACATAAACGCCCCATGAGAGCAGGAACCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCGAATGGCTATGTGTGTaGAGGAGCGCTTTGTATGCT +
Preference number: 3 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGEWLCV*RSALYA
Trigger: AGCATACAAAGCGCTCCTCAACACACATAGCCATTC...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTATCATCTGTAACAGTTaGTGGGTGGCCAGACAGTGC +
Preference number: 3 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTIICNS*WVARQC
Trigger: GCACTGTCTGGCCACCCACAAACTGTTACAGATGAT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp ACTGTGAGGTGGGAGACAGTAGTATGGGGAAAGACATaGACACCACAGCCCTGTTTTCTATACAAATATATA +
Preference number: 3 (lower is better)
Translates to: TVRWETVVWGKT*TPQPCFLYKYI
Trigger: TATATATTTGTATAGAAAACAGGGCTGTGGTGTTCATGTCTTTCCCCATACTACTGTCTCCCACCTCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp ACTAATATCAATAGATCACCATGCTGTACTATTGAGTaGGAAACCGTAGTAGCAGAAGGAACTGTGAGGTGG +
Preference number: 3 (lower is better)
Translates to: TNINRSPCCTIE*ETVVAEGTVRW
Trigger: CCACCTCACAGTTCCTTCTGCTACTACGGTTTCTCACTCAATAGTACAGCATGGTGATCTATTGATATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp GTCTGCATTTTTAATTTAGGCCTTGAATGTTCTTATTaGCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCA +
Preference number: 3 (lower is better)
Translates to: VCIFNLGLECSY*LRLGVSGVKEA
Trigger: TGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTCAAGGCCTAAATTAAAAATGCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR GCA 72 bp CTCACCTCCTTGTTGAAAGATAAGAAACACCTAGAGTaGAGATTACCAACCAACACAGACTTTCTCAATCAG +
Preference number: 3 (lower is better)
Translates to: LTSLLKDKKHLE*RLPTNTDFLNQ
Trigger: CTGATTGAGAAAGTCTGTGTTGGTTGGTAATCTGCACTCTAGGTGTTTCTTATCTTTCAACAAGGAGGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTGGGATCTGGGCCAATTaGGTGTTTTTCACACGCATT +
Preference number: 3 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTGIWAN*VFFTRI
Trigger: AATGCGTGTGAAAAACACCAAATTGGCCCAGATCCC...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATGAGCGCTTTGTATGCTaGAATTTAATCCTCAAAAGA +
Preference number: 3 (lower is better)
Translates to: CYSERTDSRASYSAVLHDERFVC*NLILKR
Trigger: TCTTTTGAGGATTAAATTCAAGCATACAAAGCGCTC...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTCTGTCTTCTTTCCACTaGGGTTCCTATGCAACAGTG +
Preference number: 3 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTLSSFH*GSYATV
Trigger: CACTGTTGCATAGGAACCCAAGTGGAAAGAAGACAG...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGGAGTTCCTGAAATCATaGGTTCTGATCATTCCCCTG +
Preference number: 3 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLEFLKS*VLIIPL
Trigger: CAGGGGAATGATCAGAACCAATGATTTCAGGAACTC...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTAGCATTCCACAGGGATaGCTCATCTATTTGTATTTT +
Preference number: 3 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITSIPQG*LIYLYF
Trigger: AAAATACAAATAGATGAGCAATCCCTGTGGAATGCT...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAATGTAGTGAACTAGATTaGGCCTCGGTCATAATTACT +
Preference number: 3 (lower is better)
Translates to: SGLLSMALTSMLLTKYMECSELD*ASVIIT
Trigger: AGTAATTATGACCGAGGCCAAATCTAGTTCACTACA...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp AGTAATTATGAACGCAACTTGAGTTCAATGAGTTCCTaGTGTGCCCAGGTTCTAAAATACAGAAGGGTAACA +
Preference number: 3 (lower is better)
Translates to: SNYERNLSSMSS*CAQVLKYRRVT
Trigger: TGTTACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTGCGTTCATAATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CCA 72 bp TATCAGTATTTGATTAGGTACACAAACAAGTCTTCCTaGAGGATGTCCTCTGGGCTATTAAGTATGGCTCTA +
Preference number: 3 (lower is better)
Translates to: YQYLIRYTNKSS*RMSSGLLSMAL
Trigger: TAGAGCCATACTTAATAGCCCAGAGGACATCCTCCAGGAAGACTTGTTTGTGTACCTAATCAAATACTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp TTAAGGCCACACACGATATTCACGGTGTTGGTATTATaGCATCAAGTTCAGAGCTTTTCTGAAAATATCCAG +
Preference number: 3 (lower is better)
Translates to: LRPHTIFTVLVL*HQVQSFSENIQ
Trigger: CTGGATATTTTCAGAAAAGCTCTGAACTTGATGTCATAATACCAACACCGTGAATATCGTGTGTGGCCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp AATACGGAAATACCTTTGTGTATTTCCTTCCCCTACTaGATAGGATTGACCTGCATAACCAATATACTGTGG +
Preference number: 3 (lower is better)
Translates to: NTEIPLCISFPY*IGLTCITNILW
Trigger: CCACAGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAAGGTATTTCCGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp AGAAGGTACACCTATACCTTGGGCAGTTTTAAGGCATaGTTACAAGTAAAAATCAACTGGCTTAAACATGGG +
Preference number: 3 (lower is better)
Translates to: RRYTYTLGSFKA*LQVKINWLKHG
Trigger: CCCATGTTTAAGCCAGTTGATTTTTACTTGTAATCATGCCTTAAAACTGCCCAAGGTATAGGTGTACCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCTTCTTAAGTAGCAATTaGAAGAGCCAATGTTTGGCA +
Preference number: 3 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGFLSSN*KSQCLA
Trigger: TGCCAAACATTGGCTCTTCAAATTGCTACTTAAGAA...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGCTGCTTAAAGGTATGTaGGTGCCAAATATACATGAT +
Preference number: 3 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLLLKGM*VPNIHD
Trigger: ATCATGTATATTTGGCACCAACATACCTTTAAGCAG...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp CAAACATTACCATGTGTTCACATAGGCATAATGCCCTaGTATCATAAAGGGCAAAAGTTAACACCTAAAACG +
Preference number: 3 (lower is better)
Translates to: QTLPCVHIGIMP*YHKGQKLTPKT
Trigger: CGTTTTAGGTGTTAACTTTTGCCCTTTATGATATCAGGGCATTATGCCTATGTGAACACATGGTAATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp CATGACAATTCTGATAAAAAGAATGGCTATGTGTGTTaGGGAGCGCTTTGTATGCTTGAATTTAATCCTCAA +
Preference number: 3 (lower is better)
Translates to: HDNSDKKNGYVC*GALCMLEFNPQ
Trigger: TTGAGGATTAAATTCAAGCATACAAAGCGCTCCTCAACACACATAGCCATTCTTTTTATCAGAATTGTCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR TCA 72 bp TTTTCAAACTACAGTCTTATGTTGCTAATTAGTTACTaGACATTCCATTTGAACGTCTCAAACTCCACTAGC +
Preference number: 3 (lower is better)
Translates to: FSNYSLMLLISY*TFHLNVSNSTS
Trigger: GCTAGTGGAGTTTGAGACGTTCAAATGGAATGTTCAGTAACTAATTAGCAACATAAGACTGTAGTTTGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTACCCATCGTGGCCCAATaGCTGCGGCCGAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLPIVAQ*LRPKDG
Trigger: TCCATCCTTCGGCCGCAGTCATTGGGCCACGATGGG...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCTGACTGGCCCATCGTaGCCCAATGACTGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELLTGPS*PNDCGR
Trigger: TCGGCCGCAGTCATTGGGCCACGATGGGCCAGTCAG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCCCTGCTGTCTTGGATaGCCTGCTCTGGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELPCCLG*PALGMR
Trigger: CCTCATCCCCAGAGCAGGTCATCCAAGACAGCAGGG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCTCAGAAGCCATGGGTaGGGTAGCAGTGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELLRSHG*GSSAGW
Trigger: CCACCCAGCACTGCTACCTCACCCATGGCTTCTGAG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACCATCCCCTCGAGGATTaGTCTGTTAGGGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNHPLED*SVRDLG
Trigger: GCCCAGATCCCTAACAGAGCAATCCTCGAGGGGATG...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACCAAAGAACTGGGCCCTaGATAAAGGAGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNQRTGP*IKEQVG
Trigger: CCCCACCTGCTCCTTTATGCAGGGCCCAGTTCTTTG...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACAGCCAGGTTCCACGTTaGCCTCCAATGACACCACCT +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNSQVPR*PPMTPP
Trigger: AGGTGGTGTCATTGGAGGCCAACGTGGAACCTGGCT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACACCTGTACCCAGGAGTaGACTGTGGACATGGCACAC +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNTCTQE*TVDMAH
Trigger: GTGTGCCATGTCCACAGTCCACTCCTGGGTACAGGT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACAGCCGGTTGTGGTGGTaGGCGCCTGTAATCCTATTG +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNSRLWW*APVILL
Trigger: CAATAGGATTACAGGCGCCCACCACCACAACCGGCT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTTTGGCTACACTGGCTaGCAGGTGCATGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNFGYTG*QVHVGH
Trigger: ATGTCCCACATGCACCTGTCAGCCAGTGTAGCCAAA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTACCGCTCTTCCCTTTTTaGAGGTGGGAGCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLPLFPF*RWEQFG
Trigger: CCCAAACTGCTCCCACCTGCAAAAAGGGAAGAGCGG...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCGGTGAGTGGAGAGGCTaGCTTTGGAAACCACGGGGT +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELGEWRG*LWKPRG
Trigger: ACCCCGTGGTTTCCAAAGGCAGCCTCTCCACTCACC...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAGTAGACCAAGGTCAATaGCAGGCGGGTAGACGGGAA +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLVDQGQ*QAGRRE
Trigger: TTCCCGTCTACCCGCCTGCCATTGACCTTGGTCTAC...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCGCCCCACGAAAGGGCTaGGAGGGACTTTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELAPRKG*EGLFVT
Trigger: GGTGACAAAAAGTCCCTCCCAGCCCTTTCGTGGGGC...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp CTGGCTGACAGGTGCATGTGGGACATCCATGTGGAGTaGCAGAAGTACTTAGATATGAGTCTGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LADRCMWDIHVE*QKYLDMSLEPR
Trigger: CCTGGGCTCCAGACTCATATCTAAGTACTTCTGCAACTCCACATGGATGTCCCACATGCACCTGTCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp CCAGACCGCTCTTCCCTTTTTGCAGGTGGGAGCAGTTaGGGCATTACCTTTAGGTTCCAATACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PDRSSLFAGGSS*GITFRFQYRAP
Trigger: AGGAGCCCTGTATTGGAACCTAAAGGTAATGCCCAAACTGCTCCCACCTGCAAAAAGGGAAGAGCGGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp GAAGAGCCAAGCAGAAGTCAGGAGCCTCTCAGCATCTaGCAAGGGAGCCAGTGTTTAGTATCTGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: EEPSRSQEPLSI*QGSQCLVSGTS
Trigger: ACTGGTGCCAGATACTAAACACTGGCTCCCTTGCAAGATGCTGAGAGGCTCCTGACTTCTGCTTGGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTGGCAGGTGCTCATATaGGTTAACCCCAGGCTAATG +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNWQVLI*VNPRLM
Trigger: CATTAGCCTGGGGTTAACGCATATGAGCACCTGCCA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACAAACACCCGAGACTGTaGAAACGACAGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNKHPRL*KRQCMA
Trigger: AGCCATGCACTGTCGTTTCCACAGTCTCGGGTGTTT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACCAGGTGGGAGCAGTTTaGGCATTACCTTTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNQVGAV*ALPLGS
Trigger: GGAACCTAAAGGTAATGCCCAAACTGCTCCCACCTG...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCAGTGGACTGTGGACATaGCACACCAGGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELSGLWT*HTRTCC
Trigger: GCAGCATGTCCTGGTGTGCCATGTCCACAGTCCACT...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTGAGGAGCAGGGAGCCTaGGAAGCTTGGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITEEQGA*EAWSPG
Trigger: TCCTGGGCTCCAAGCTTCTCAGGCTCCCTGCTCCTC...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTATGGTGTAAACTAACCTaGGCACCCTTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLWCKLT*APFSFG
Trigger: GCCAAAGGAGAAGGGTGCCCAGGTTAGTTTACACCA...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACCTAAAACGTACCCTGTaGATAGCTAATGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNLKRTL*IANASP
Trigger: TGGAGAGGCATTAGCTATTCACAGGGTACGTTTTAG...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCGCCTCCAGCACCTTCTaGTCTGCAATTGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELASSTF*SAIDFV
Trigger: GACAAAGTCAATTGCAGAGCAGAAGGTGCTGGAGGC...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACACAATACATGGCAGGTaGTCATATGCGTTAACCCCA +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNTIHGR*SYALTP
Trigger: TGGGGTTAACGCATATGAGCACCTGCCATGTATTGT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACGAGAGCATCCCCAAGTaGACAAGTGTGAGCATAATT +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNESIPK*TSVSII
Trigger: AATTATGCTCACACTTGTGCACTTGGGGATGCTCTC...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCATCTGTAACAGTTTGTaGGTGGCCAGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELICNSL*VARQCC
Trigger: GCAGCACTGTCTGGCCACCCACAAACTGTTACAGAT...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAAGCCATGGACAGACATaGACTCTGTCTTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLSHGQT*TLSSFH
Trigger: GTGGAAAGAAGACAGAGTCCATGTCTGTCCATGGCT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCCCAGATCTCTGGGATaGGAAATTCAGCAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELPRSLG*EIQQVV
Trigger: CACTACCTGCTGAATTTCCCATCCCAGAGATCTGGG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTATTCCCTTTTTGCAGGTaGGAGCAGTTTGGGCATTAC +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLFPFCR*EQFGHY
Trigger: GTAATGCCCAAACTGCTCCCACCTGCAAAAAGGGAA...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATACTGCGGCCGAAGGATaGAAGTCCTGTGAGCGGTCA +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDTAAEG*KSCERS
Trigger: TGACCGCTCACAGGACTTCCATCCTTCGGCCGCAGT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCCAGTGTTTAGTATCTaGCACCAGTGCTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELPVFSI*HQCSPP
Trigger: AGGAGGTGAGCACTGGTGCCAGATACTAAACACTGG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp CACATCGGGCCAAGAGCTCAGCCTCCAAGATCGCCTTaGACCATCTCCCTCTTCTGGTATAATACGGAAATA +
Preference number: 4 (lower is better)
Translates to: HIGPRAQPPRSP*TISLFWYNTEI
Trigger: TATTTCCGTATTATACCAGAAGAGGGAGATGGTCAAAGGCGATCTTGGAGGCTGAGCTCTTGGCCCGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATTGTCCCTTGGCAGTCTaGGCAGAAGCTCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDCPLAV*AEAHSG
Trigger: TCCACTGTGAGCTTCTGCTCAGACTGCCAAGGGACA...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTGGTTGAAAGACACTTaGCTGGATCACTTTGCTACA +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNWLKDT*LDHFAT
Trigger: TGTAGCAAAGTGATCCAGGCAAGTGTCTTTCAACCA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAGGATCTGGGCCAATTTaGTGTTTTTCACACGCATTC +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLGSGPI*CFSHAF
Trigger: GAATGCGTGTGAAAAACACCAAATTGGCCCAGATCC...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAGCTCTGTTAGGGATCTaGGCCAATTTGGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLALLGI*ANLVFF
Trigger: GAAAAACACCAAATTGGCCCAGATCCCTAACAGAGC...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTACCTCCATCAATCATATaGATAACCTCCCACACACTC +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLPPSII*ITSHTL
Trigger: GAGTGTGTGGGAGGTTATCCATATGATTGATGGAGG...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTCCCAGGAGTGGACTGTaGACATGGCACACCAGGACA +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITPRSGL*TWHTRT
Trigger: TGTCCTGGTGTGCCATGTCCACAGTCCACTCCTGGG...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCTTGGATCTGAAATATaGCTCCACTGGGAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELLGSEI*LHWEAR
Trigger: TCTAGCCTCCCAGTGGAGCCATATTTCAGATCCAAG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCTGGAGGATGTCCTCTaGGCTATTAAGTATGGCTCT +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELLEDVL*AIKYGS
Trigger: AGAGCCATACTTAATAGCCCAGAGGACATCCTCCAG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACATTGCAAATAAGAGATaGCTCCAGGACAGGCATAAG +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNIANKR*LQDRHK
Trigger: CTTATGCCTGTCCTGGAGCCATCTCTTATTTGCAAT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACCCATTTCTGATAACTTaGCCTCCAAAGATGACATTG +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNPFLIT*PPKMTL
Trigger: CAATGTCATCTTTGGAGGTCAAGTTATCAGAAATGG...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTATCATTCTCTAAAGTaGGATATGCTGGTGAACAGC +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNYHSLK*DMLVNS
Trigger: GCTGTTCACCAGCATATCTCACTTTAGAGAATGATA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCTGCTCTCAAGATACTaGTTTAGAGGAGAGACTAGG +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELLLSRY*FRGETR
Trigger: CCTAGTCTCTCCTCTAAATCAGTATCTTGAGAGCAG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTATCTCCACTTTACAGATaGGAGGCATTTGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLSPLYR*EAFAQS
Trigger: ACTTTGAGCAAATGCCTCTCATCTGTAAAGTGGAGA...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAGGGCACTGCAGCAGTaGGCTGTGTCCACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMERALQQ*AVSTVL
Trigger: TAGCACTGTGGACACAGCTCACTGCTGCAGTGCCCT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTGTGAGCGGTCAGGCCTaGATGTGGAGGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTVSGQA*MWRSAP
Trigger: TGGGGCTGACCTCCACATGCAGGCCTGACCGCTCAC...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCACCCTGAAGAGGAGCTaGACCAAGCGCCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGTLKRS*TKRLSS
Trigger: GGAGGACAGGCGCTTGGTGCAGCTCCTCTTCAGGGT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAGGTACACCTATACCTTaGGCAGTTTTAAGGCATGAT +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLGTPIP*AVLRHD
Trigger: ATCATGCCTTAAAACTGCCCAAGGTATAGGTGTACC...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTCGTGAGAGGACGATCTaGAATGATGAGCGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITRERTI*NDERPA
Trigger: TGCGGGACGCTCATCATTCCAGATCGTCCTCTCACG...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTCCCCGTAGACAAACTTaGACAGACCCTTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGPRRQT*TDPSRC
Trigger: ACATCGAGAAGGGTCTGTTCAAGTTTGTCTACGGGG...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACGCAAAAGCTTCTTTATaGCAGAAAAGACTCCAAACA +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNAKASL*QKRLQT
Trigger: TGTTTGGAGTCTTTTCTGTCATAAAGAAGCTTTTGC...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCAAGGTTGAGGCAAGGTaGGGGCAGCTGGGAACCCTA +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGKVEAR*GQLGTL
Trigger: TAGGGTTCCCAGCTGCCCTCACCTTGCCTCAACCTT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTCAGGTAGGAGGACCCTaGAGAGGAGCTGCACCAAGC +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTQVGGP*RGAAPS
Trigger: GCTTGGTGCAGCTCCTCTTCAGGGTCCTCCTACCTG...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTCTCTGCCGTTTTACATaGTGTCACCCTTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGLCRFT*CHPSGV
Trigger: GACTCCAGAAGGGTGACATCATGTAAAACGGCAGAG...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTGGTAGGACAATCATTTaGGCCCAGGAGTTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITGRTII*AQEFEP
Trigger: TGGCTCGAACTCCTGGGCTCAAATGATTGTCCTACC...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAATGAAACATTTTCACTaGACCATCTCTACCCGCATA +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLMKHFH*TISTRI
Trigger: TATGCGGGTAGAGATGGTTCAGTGAAAATGTTTCAT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACGAGGTTTTAGGTAGATaGAGACTGCATAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNEVLGR*RLHKME
Trigger: TTCCATTTTATGCAGTCTGCATCTACCTAAAACCTC...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTTGTTCCCAGTACCACTaGCAGCTTGAATGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGCSQYH*QLEWKG
Trigger: CCCTTTCCATTCAAGCTGGCAGTGGTACTGGGAACA...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAGAGTTTGAACTACTCTaGTTAAAGGTATGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLEFELL*LKVCWC
Trigger: GCACCAACATACCTTTAAGCAGAGTAGTTCAAACTC...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCTTTTTATTAGGTCTGTaGTCCACGCCCAGAATAGTG +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELFLLGL*STPRIV
Trigger: CACTATTCTGGGCGTGGAGCACAGACCTAATAAAAA...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAACTTCCACTGTGAAGTaGTTTGTAAAAAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLTSTVK*FVKSSP
Trigger: GGGTGAACTTTTTACAAAGCACTTCACAGTGGAAGT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTGTGACGTCTGCATCCTaGAAGGCTTTCTCTACGTCA +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGVTSAS*KAFSTS
Trigger: TGACGTAGAGAAAGCCTTCCAGGATGCAGACGTCAC...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTACTAAGCCTACTTCTATaGCTCCAAACTGACTTCTAT +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLLSLLL*LQTDFY
Trigger: ATAGAAGTCAGTTTGGAGCCATAGAAGTAGGCTTAG...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATGTAACAGTTTGTGGGTaGCCAGACAGTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDVTVCG*PDSAAI
Trigger: AATGGCAGCACTGTCTGGCCACCCACAAACTGTTAC...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAACCATCTCCCTCTTCTaGTATAATACGGAAATACCT +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLTISLF*YNTEIP
Trigger: AGGTATTTCCGTATTATACCAGAAGAGGGAGATGGT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACAGAAAGGCCTGATGTaGCACCCCAGAGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEQKGLM*HPRELF
Trigger: GAACAGCTCTCTGGGGTGCCACATCAGGCCTTTCTG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTATGTAAGAATTTGGGGTaGGAGAGGATTATGAATTCC +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLCKNLG*ERIMNS
Trigger: GGAATTCATAATCCTCTCCCACCCCAAATTCTTACA...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCAAAGGTCAGTGTAATTaGGGCAGAGAAGGCAGAATA +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELKGQCN*GREGRI
Trigger: TATTCTGCCTTCTCTGCCCCAATTACACTGACCTTT...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTCAACAAGCATTTATTaGGCATATGAAGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNSTSIY*AYEGYR
Trigger: TCTGTACCCTTCATATGCCCAATAAATGCTTGTTGA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCCCAGCCTGGCCAACATaGCGAAACCCCAAATCACCG +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGPAWPT*RNPKSP
Trigger: CGGTGATTTGGGGTTTCGCCATGTTGGCCAGGCTGG...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp GGAGTGGTCTGGAACTGTACATCTAGTAGTACATATTaGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTA +
Preference number: 4 (lower is better)
Translates to: GVVWNCTSSSTY*GWEMKMEAMGL
Trigger: TAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACTACTAGATGTACAGTTCCAGACCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCCAAGGAATGAGCACTaGGAAAATCTACCATTTCAA +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELPRNEH*ENLPFQ
Trigger: TTGAAATGGTAGATTTTCTCAGTGCTCATTCCTTGG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTAATTGCTGGGATCAGTaGAGGCCTCTAGAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGNCWDQ*RPLERD
Trigger: GTCTCTTTCTAGAGGCCTTCACTGATCCCAGCAATT...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATAAAGGCAGGAAGCTATaGCAGGCCTGTAGCATCATT +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDKGRKL*QACSII
Trigger: AATGATGCTACAGGCCTGTCATAGCTTCCTGCCTTT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTTTCTGCCCAGACCTCTaGGAGCATCCCCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTFCPDL*EHPQVH
Trigger: GTGCACTTGGGGATGCTCTCAGAGGTCTGGGCAGAA...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTCACCAGAAACGGCACTaGGGACATCCAAGAAGTATT +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGHQKRH*GHPRSI
Trigger: AATACTTCTTGGATGTCCTCAGTGCCGTTTCTGGTG...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTAGGATGGAAGTCCTGTaGGCGGTCAGGCCTGCATGT +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTRMEVL*AVRPAC
Trigger: ACATGCAGGCCTGACCGCTCACAGGACTTCCATCCT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTTTCTGGTTGTTACAGTaGAAGGACCGATTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGFWLLQ*KDRFQS
Trigger: GCTCTGGAATCGGTCCTTTCACTGTAACAACCAGAA...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATAAATCCCCTGTTGGTTaGAAGACACTTGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDKSPVG*KTLAWI
Trigger: GATCCAGGCAAGTGTCTTTCAACCAACAGGGGATTT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCTAGCATGGTGTAATTaGCTCTGCAATCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELLAWCN*LCNLKK
Trigger: TTTCTTGAGATTGCAGAGTCAATTACACCATGCTAG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATGTATGGGGAAAGACATaGACACCACAGCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDVWGKT*TPQPCF
Trigger: AAAACAGGGCTGTGGTGTTCATGTCTTTCCCCATAC...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACTGTGGAAACGACAGTaGATGGCTGTGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMELWKRQ*MAVAVS
Trigger: ACTCACAGCCACAGCCATGCACTGTCGTTTCCACAG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAACACTGGCTGACAGGTaGATGTGGGACATCCATGTG +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMETLADR*MWDIHV
Trigger: CACATGGATGTCCCACATGCACCTGTCAGCCAGTGT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTACAGTTATGAGCAATaGTATAAAAGAAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNYSYEQ*YKRKAG
Trigger: TCCTGCCTTTCTTTTATAGCATTGCTCATAACTGTA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTTCGTGGCCCAATGACTaGGGCCGAAGGATGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSSWPND*GRRMEV
Trigger: GACTTCCATCCTTCGGCCGCAGTCATTGGGCCACGA...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAATGTTGGTAGAATACTaGTACATACCCAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLMLVEY*YIPRIQ
Trigger: CTGAATTCTGGGTATGTAGCAGTATTCTACCAACAT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCAATGACACCACCTCCTaGTATTCATATCCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELNDTTS*YSYPCV
Trigger: TACACAAGGATATGAATACCAGGAGGTGGTGTCATT...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTTCTGGAGCCCAGGAGTaGTCTGGAACTGTACATCTA +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITSGAQE*SGTVHL
Trigger: TAGATGTACAGTTCCAGACCACTCCTGGGCTCCAGA...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCCCACTTTGGCTACACTaGCTGACAGGTGCATGTGGG +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGPLWLH*LTGACG
Trigger: CCCACATGCACCTGTCAGCCAGTGTAGCCAAAGTGG...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATTTACTGCTTGTAATGTaGCACTGTCTGCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDLLLVM*HCLPLS
Trigger: TGACAGGGGCAGACAGTGCCACATTACAAGCAGTAA...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGTCAGAGCTGGGGCGTaGCATTCTGCAGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSVRAGA*HSAGNF
Trigger: GAAGTTGCCTGCAGAATGCCACGCCCCAGCTCTGAC...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTGAATCCAAGGCCCTTTaGCGAGTCCCATCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTESKAL*RVPSPP
Trigger: AGGGGGAGATGGGACTCGCCAAAGGGCCTTGGATTC...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATACAAACAAGTCTTCCTaGAGGATGTCCTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDTNKSS*RMSSGL
Trigger: TAGCCCAGAGGACATCCTCCAGGAAGACTTGTTTGT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp CCTATGCAACAGTGTAACTGGATCATCTGTAACAGTTaGTGGGTGGCCAGACAGTGCTGCCATTGTTCAATA +
Preference number: 4 (lower is better)
Translates to: PMQQCNWIICNS*WVARQCCHCSI
Trigger: TATTGAACAATGGCAGCACTGTCTGGCCACCCACAAACTGTTACAGATGATCCAGTTACACTGTTGCATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCGCCCCTCCTTCACAGTaGCAGAATCACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGAPPSQ*QNHRRR
Trigger: CCTTCTTCTGTGATTCTGTCACTGTGAAGGAGGGGC...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTTGGACAAATACTTATTaGACTCCTGCACTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITWTNTY*TPALCR
Trigger: CCGGCACAGTGCAGGAGTTCAATAAGTATTTGTCCA...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTTTAGGCAGGGTTGAGTaGTTCAATCTAAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGLGRVE*FNLRLR
Trigger: CCTCAACCTTAGATTGAATCACTCAACCCTGCCTAA...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCTCATTAGCTTCATGTTaGACATTCCCAGAAGCTAAA +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELSLASC*TFPEAK
Trigger: TTTAGCTTCTGGGAATGTTCAACATGAAGCTAATGA...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCAGGACATGTGCAATGTaGCCAATATCAGTATTTGAT +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELRTCAM*PISVFD
Trigger: ATCAAATACTGATATTGGTCACATTGCACATGTCCT...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCGAGTCCCTTGAGCACTaGAGGGCTATAATCACCCAC +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGESLEH*RAIITH
Trigger: GTGGGTGATTATAGCCCTTCAGTGCTCAAGGGACTC...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAGTGGGACTACAGGCATaGAACCAGAACTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEVGLQA*NQNCLR
Trigger: CCTAAGACAGTTCTGGTTTCATGCCTGTAGTCCCAC...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAGGTTTCGATTGAGTTaGTCCCGCCCTGACATACCA +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMERFRLS*SRPDIP
Trigger: TGGTATGTCAGGGCGGGAGCAACTCAATCGAAACCT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCTGGGGCGTGGCATTCTaGAGGCAACTTCTACCCTTT +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGWGVAF*RQLLPF
Trigger: AAAGGGTAGAAGTTGCCTGCAGAATGCCACGCCCCA...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAATGGCACACCAGGACATaGTGCGATTCCTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEWHTRT*CDSWRK
Trigger: TTTTCTCCAGGAATCGCAGCATGTCCTGGTGTGCCA...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATCTTGAATGTTCTTATTaGCTCAGGCTGGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDLECSY*LRLGVS
Trigger: TGAGACTCCCAGCCTGAGGCAATAAGAACATTCAAG...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCCCTTGGGCAAGGTACTaGATCTCCCTAAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGPWARY*ISLSLS
Trigger: ACTGAGGCTTAGGGAGATGCAGTACCTTGCCCAAGG...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTGAGCTGTGTCCACAGTaGTACACTTCAGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTELCPQ*YTSAWS
Trigger: CGACCAGGCTGAAGTGTAGCACTGTGGACACAGCTC...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTCAGTCAAAAGATAACTaGACAGCTGCAGGAACAAGG +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGQSKDN*TAAGTR
Trigger: CCTTGTTCCTGCAGCTGTCCAGTTATCTTTTGACTG...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTTCCACCCTGCTGTCTTaGATGACCTGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTSTLLS*MTCSGD
Trigger: ATCCCCAGAGCAGGTCATCCAAGACAGCAGGGTGGA...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATGTGGGCAACGTTTCATaGAAAAGGAAGGATGACTCA +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDVGNVS*KRKDDS
Trigger: TGAGTCATCCTTCCTTTTCCATGAAACGTTGCCCAC...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTATTATCCCAGATCTCTaGGATGGGAAATTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGIIPDL*DGKFSR
Trigger: CCTGCTGAATTTCCCATCCCAGAGATCTGGGATAAT...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAGGGTGTGGATATGGGTaGAAGAGCAAATGGGCTACT +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEGCGYG*KSKWAT
Trigger: AGTAGCCCATTTGCTCTTCCACCCATATCCACACCC...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCACATGCTGCGATTCCTaGAGAAAAATCGAACTTAAA +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELTCCDS*RKIELK
Trigger: TTTAAGTTCGATTTTTCTCCAGGAATCGCAGCATGT...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTTGGAGAGGCTGCCTTTaGAAACCACGGGGTAGGATC +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSWRGCL*KPRGRI
Trigger: GATCCTACCCCGTGGTTTCCAAAGGCAGCCTCTCCA...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATGAAATATGGCTCCACTaGGAGGCTAGAGCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDEIWLH*EARAKD
Trigger: ATCTTTTGCTCTAGCCTCCCAGTGGAGCCATATTTC...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACCAGAACTTCTGCCATaGCCATGGGCTTTAAACCAT +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEPELLP*PWALNH
Trigger: ATGGTTTAAAGCCCATGGTCATGGCAGAAGTTCTGG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGCATCTCAGCCAACTGTaGTCACCTTATTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLHLSQL*SPYFWP
Trigger: GGGCCAGAAATAAGGTGATCACAGTTGGCTGAGATG...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTACTTGTTGCAGGCTCTaGGGGCACACCCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSTCCRL*GHTQRH
Trigger: ATGTCTTTGGGTGTGCCCTCAGAGCCTGCAACAAGT...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCATGGAAAAGGAAGGATaGCTCACATCGGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGMEKEG*LTSGQE
Trigger: CTCTTGGCCCGATGTGAGTCATCCTTCCTTTTCCAT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCAGTGAGATATGCTGGTaGACAGCACACAACCTGGTG +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGSEICW*TAHNLV
Trigger: CACCAGGTTGTGTGCTGTTCACCAGCATATCTCACT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATTTTTACTCTTGGATCTaGAATATGGCTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDFYSWI*NMAPLG
Trigger: TCCCAGTGGAGCCATATTTCAGATCCAAGAGTAAAA...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATCACACCCAAAGACATTaGAGAAAGTCCAGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDHTQRH*RKSSSN
Trigger: ATTGCTACTGGACTTTCTGCAATGTCTTTGGGTGTG...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCGCTGTAGCAAAGCACTaGAAAGGGAAGAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGAVAKH*KGKSQA
Trigger: TGCTTGGCTCTTCCCTTTGCAGTGCTTTGCTACAGC...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCGATCACTTTGCTACATaGAATTTCTTTGTAGTGAAC +
Preference number: 4 (lower is better)
Translates to: STYLGWEMKMEAMGLGELDHFAT*NFFVVN
Trigger: GTTCACTACAAAGAAATTGCATGTAGCAAAGTGATC...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAAGCCCAGGAGTGGTCTaGAACTGTACATCTAGTAGT +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMESPGVV*NCTSSS
Trigger: ACTACTAGATGTACAGTTCCAGACCACTCCTGGGCT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTTTCTTAACACATAGCTaGACCCAGCAGCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITFLTHS*TQQPKH
Trigger: ATGTTTGGGCTGCTGGGTCCAGCTATGTGTTAAGAA...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTTGGTTCCTGCTCTCATaGGGCGTTTATGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSWFLLS*GVYVLG
Trigger: CCCCAGAACATAAACGCCCCATGAGAGCAGGAACCA...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATAGTTCAATGAGTTCCTaGTGTGCCCAGGTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDSSMSS*CAQVLK
Trigger: TTTTAGAACCTGGGCACACCAGGAACTCATTGAACT...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTTATAAATCAGTGGAGTaGGGGTGTTGTAATTGCCCA +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGYKSVE*GCCNCP
Trigger: TGGGCAATTACAACACCCCCACTCCACTGATTTATA...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTACAGAAAATAAAAGCTaGATGTGGTGGCATGCACCT +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGTENKS*MWWHAP
Trigger: AGGTGCATGCCACCACATCCAGCTTTTATTTTCTGT...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp TGTAGCATCATTTGTAGCAGGAGCACCAATCTTAAATaGCTGGGATCAGTGAAGGCCTCTAGAAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: CSIICSRSTNLK*LGSVKASRKRL
Trigger: AAGTCTCTTTCTAGAGGCCTTCACTGATCCCAGCAATTTAAGATTGGTGCTCCTGCTACAAATGATGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGAACAGGGCCAAGGAATaGGCACTGAGAAAATCTACC +
Preference number: 4 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLNRAKE*ALRKST
Trigger: GGTAGATTTTCTCAGTGCTCATTCCTTGGCCCTGTT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCAGTCATAAAGGACAATaGAGCTTCCACCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGSHKGQ*SFHPAV
Trigger: GACAGCAGGGTGGAAGCTGCATTGTCCTTTATGACT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTCAATACATTCCTCATTaGAAGCTGTCTTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITQYIPH*KLSSES
Trigger: GCTCTCTGAAGACAGCTTCCAATGAGGAATGTATTG...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGACCCTATGGGGTGGGTaGGTTTATACAAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLTLWGG*VYTKGK
Trigger: TTTGCCCTTTGTATAAACCCACCCACCCCATAGGGT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCATAATGATGTCTAATTaGGTCAGAGCTGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGIMMSN*VRAGAW
Trigger: CCACGCCCCAGCTCTGACCCAATTAGACATCATTAT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTCAACACACACCGCTATaGGTGTTTATAGACATCAAA +
Preference number: 4 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGQHTPL*VFIDIK
Trigger: TTTGATGTCTATAAACACCCATAGCGGTGTGTGTTG...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTCGACCCAAAATGAAGTaGACCATCTCTGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITRPKMK*TISVRK
Trigger: TTTTCTAACAGAGATGGTTCACTTCATTTTGGGTCG...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCTCTATGGCTCCAAACTaGCTTCTATTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGSMAPN*LLLYPP
Trigger: AGGTGGGTACAATAGAAGTCAGTTTGGAGCCATAGA...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGTGTGGCTTTTGTGAGTaGACTGCAATAAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLCGFCE*TAIRLR
Trigger: CCTGAGTCTTATTGCAGTTCACTCACAAAAGCCACA...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTATTGTTAGGCAGGGTTaGGTGATTCAATCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITIVRQG*VIQSKV
Trigger: AACCTTAGATTGAATCACTCAACCCTGCCTAACAAT...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTTCAGCAAAGTTGTACTaGGCACCTGCTGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSSAKLY*APAVAK
Trigger: CTTTGCTACAGCAGGTGCTCAGTACAACTTTGCTGA...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTTCACGGCTGACATGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTSRLTW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCATGTCAGCCGTGA...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAATGCTGTACTATTGAGTaGGAAACCGTAGTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMECCTIE*ETVVAE
Trigger: TTCTGCTACTACGGTTTCTCACTCAATAGTACAGCA...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAATTTAAACCATTCCACTaGTTCCTGGAGGTCAAATGG +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEFKPFH*FLEVKW
Trigger: CCATTTGACCTCCAGGAAGCAGTGGAATGGTTTAAA...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTCACACCAGGACATGCTaGGATTCCTGGAGAAAAATC +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTHTRTC*DSWRKI
Trigger: GATTTTTCTCCAGGAATCGCAGCATGTCCTGGTGTG...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTAACAGACATGGTTCCTaGTCTCATGGGGCGTTTATG +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSNRHGS*SHGAFM
Trigger: CATAAACGCCCCATGAGAGCAGGAACCATGTCTGTT...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTTATCCTTTCTGTAGCTaGAGCCATGGACAGACATGG +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSYPFCS*SHGQTW
Trigger: CCATGTCTGTCCATGGCTCCAGCTACAGAAAGGATA...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCAGTACATATTTGGGCTaGGAGATGAAAATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGSTYLG*EMKMEA
Trigger: GGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCAGTTCTAGTGTAGGTTaGCTATTTTCCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGSSSVG*LFSPVS
Trigger: GGAGACTGGGGAAAATAGCCAACCTACACTAGAACT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGCATCAGGGAAGAGTCTaGAGTCTGTATATCGAGGTA +
Preference number: 4 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLHQGRV*SLYIEV
Trigger: TACCTCGATATACAGACTCCAGACTCTTCCCTGATG...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTGTGTCAACAAAGAACTaGGCCCTGCATAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTVSTKN*ALHKGA
Trigger: TGCTCCTTTATGCAGGGCCCAGTTCTTTGTTGACAC...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTGTAATCTCACCACTTTaGGAGACTGAGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTVISPL*ETEEGG
Trigger: TCCTCCTTCCTCAGTCTCCCAAAGTGGTGAGATTAC...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCATACCAGGGACTGGTTaGCTCTATTTCTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGIPGTG*LYFWFD
Trigger: ATCAAACCAGAAATAGAGTCAACCAGTCCCTGGTAT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTTACACAGAAGCACTCTaGATGTGTAGAAATAAAAGC +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITYTEAL*MCRNKS
Trigger: GCTTTTATTTCTACACATTCAGAGTGCTTCTGTGTA...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTACCATGCTGTACTATTaGGTGAGAAACCGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTTMLYY*VRNRSS
Trigger: GCTACTACGGTTTCTCACTCAATAGTACAGCATGGT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCTCTTTATATACCCGGTaGCCTCCTATGTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGSLYTR*PPMSAN
Trigger: ATTTGCTGACATAGGAGGTCACCGGGTATATAAAGA...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTCCACTTGGGTTCCTATaGAACAGTGTAACTGGATCA +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSPLGFL*NSVTGS
Trigger: TGATCCAGTTACACTGTTGCATAGGAACCCAAGTGG...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTACAGGCATAAGGAAGTaGAAGCAAATGCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTTGIRK*KQMHES
Trigger: GGACTCATGCATTTGCTTGCACTTCCTTATGCCTGT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGTGTCTTCTTTCCACTTaGGTTCCTATGCAACAGTGT +
Preference number: 4 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLCLLST*VPMQQC
Trigger: ACACTGTTGCATAGGAACCCAAGTGGAAAGAAGACA...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTCCCCTAAAATCCTTCTaGCAAGAAGCAGGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSPLKSF*QEAGRK
Trigger: TTTTCTGCCTGCTTCTTGCCAGAAGGATTTTAGGGG...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTAGCAGAAGCTCACAGTaGAGAACTTACCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTSRSSQ*RTYLRD
Trigger: ATCTCTGAGGTAAGTTCTCCACTGTGAGCTTCTGCT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTAGAATTGGGGAGATATaGAAGCAGGAATGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTRIGEI*KQECGS
Trigger: GCTACCACATTCCTGCTTCCATATCTCCCCAATTCT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATTACAGAAGGGTAACATaGTATGAATTTGCACAACTT +
Preference number: 4 (lower is better)
Translates to: CYSERTDSRASYSAVLHDYRRVT*YEFAQL
Trigger: AAGTTGTGCAAATTCATACCATGTTACCCTTCTGTA...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp TTACTGCTGATAAATCCCCTGTTGGTTGAAAGACACTaGCCTGGATCACTTTGCTACATGCAATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LLLINPLLVERH*PGSLCYMQFLC
Trigger: ACAAAGAAATTGCATGTAGCAAAGTGATCCAGGCAAGTGTCTTTCAACCAACAGGGGATTTATCAGCAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp AATAAACATTGCGAATTACTGCTGATAAATCCCCTGTaGGTTGAAAGACACTTGCCTGGATCACTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: NKHCELLLINPL*VERHLPGSLCY
Trigger: GTAGCAAAGTGATCCAGGCAAGTGTCTTTCAACCAACAGGGGATTTATCAGCAGTAATTCGCAATGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp AGACTAGGACATGTGCAATGTGACCAATATCAGTATTaGATTAGGTACACAAACAAGTCTTCCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: RLGHVQCDQYQY*IRYTNKSSWRM
Trigger: CATCCTCCAGGAAGACTTGTTTGTGTACCTAATCAAATACTGATATTGGTCACATTGCACATGTCCTAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTAGAGTCGACCCAAAATaGAGTGAACCATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTRVDPK*SEPSLL
Trigger: TAACAGAGATGGTTCACTTCATTTTGGGTCGACTCT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCATAGGCATAATGCCCTaGTATCATAAAGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGIGIMP*YHKGQK
Trigger: CTTTTGCCCTTTATGATATCAGGGCATTATGCCTAT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGAAAATGGCATCAGCTTaGTTGACTCCCTTAATCATC +
Preference number: 4 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLKMASA*LTPLII
Trigger: GATGATTAAGGGAGTCAATCAAGCTGATGCCATTTT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTATTTCCTTCCCCTACTaGATAGGATTGACCTGCATA +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTISFPY*IGLTCI
Trigger: TATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAAT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTAGAAGCAATCCTAGCTaGAAGGGTTTCTCTAAACCT +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTRSNPS*KGFSKP
Trigger: AGGTTTAGAGAAACCCTTTCAGCTAGGATTGCTTCT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCAAGCTAAATCCCCTATaGAAGGCACAGGACTATAAA +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGKLNPL*KAQDYK
Trigger: TTTATAGTCCTGTGCCTTTCATAGGGGATTTAGCTT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAATGGCAGGAAATCAATaGAACATTTTCACTGAACCA +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEMAGNQ*NIFTEP
Trigger: TGGTTCAGTGAAAATGTTTCATTGATTTCCTGCCAT...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAAGAGGAGCGCTTTGTATaGTTGAATTTAATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEEERFV*LNLILK
Trigger: TTTGAGGATTAAATTCAAGCATACAAAGCGCTCCTC...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCCACCCTTCTGGAGTCTaGATTTTTAATTTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGHPSGV*IFNLGL
Trigger: AAGGCCTAAATTAAAAATGCAGACTCCAGAAGGGTG...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTAATGAGTTCCTGGTGTaGCCAGGTTCTAAAATACAG +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSNEFLV*PGSKIQ
Trigger: CTGTATTTTAGAACCTGGGCACACCAGGAACTCATT...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCCAGATGAGAGGCATTTaGTCAAAGTCACATTGCAAA +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGQMRGI*SKSHCK
Trigger: TTTGCAATGTGACTTTGAGCAAATGCCTCTCATCTG...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCAAAAAGCTTTGTAGCTaGAAATGTGGGCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGKKLCS*KCGQRF
Trigger: GAAACGTTGCCCACATTTCCAGCTACAAAGCTTTTT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTCAAGTAAAAATCAACTaGCTTAAACATGGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITQVKIN*LKHGLG
Trigger: ACCTAACCCATGTTTAAGCCAGTTGATTTTTACTTG...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTAGAGATACCAGGGACTaGTTGACTCTATTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTRDTRD*LTLFLV
Trigger: AACCAGAAATAGAGTCAACCAGTCCCTGGTATCTCT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTACGGTGTTGGTATTATaGCATCAAGTTCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSTVLVL*HQVQSF
Trigger: AAAGCTCTGAACTTGATGTCATAATACCAACACCGT...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTAAGAAACACCTAGAGTaGAGATTACCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTKKHLE*RLPTNT
Trigger: TGTGTTGGTTGGTAATCTGCACTCTAGGTGTTTCTT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTCTCAAATTTAAGTTTTaGCACTTCCTAGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTLKFKF*HFLAGD
Trigger: GTCACCAGCTAGGAAGTGGCAAAACTTAAATTTGAG...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTTTCATCCATAGCAGATaGGAAAACAGCATTCATTGG +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTFIHSR*ENSIHW
Trigger: CCAATGAATGCTGTTTTCCCATCTGCTATGGATGAA...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTAGATCATATAGACAATaGCTTCCCTTACTCACTAGA +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTRSYRQ*LPLLTR
Trigger: TCTAGTGAGTAAGGGAAGTCATTGTCTATATGATCT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR TCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTACTGAATTGAGTAATTaGAAACCATGGTATCAAGCC +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSTELSN*KPWYQA
Trigger: GGCTTGATACCATGGTTTTCAATTACTCAATTCAGT...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGCATCAGATTTTTAGTTaGTTCATTGTGGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLHQIFS*FIVAFL
Trigger: TAAGAAGGCCACAATGAAGCAACTAAAAATCTGATG...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR GCA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCATAATACTTGGGCTCTaGTCTCAAGATACTGATTTA +
Preference number: 4 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGIILGL*SQDTDL
Trigger: TAAATCAGTATCTTGAGAGCAGAGCCCAAGTATTAT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTCGATATTCACGGTGTTaGTATTATGACATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSRYSRC*YYDIKF
Trigger: GAACTTGATGTCATAATACCAACACCGTGAATATCG...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGAAAAGAAGCAATAACTaGGGAATCAGCTGTAATTTC +
Preference number: 4 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLKRSNN*GISCNF
Trigger: GAAATTACAGCTGATTCCCCAGTTATTGCTTCTTTT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CCA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTATTCCCCTTAAAACCTaGGCAACATTTCAGACTTAT +
Preference number: 4 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTIPLKT*ATFQTY
Trigger: ATAAGTCTGAAATGTTGCCCAGGTTTTAAGGGGAAT...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328945.7
3UTR CAA 72 bp AACCTATTCTTAAGTAGCAATTTGAAGAGCCAATGTTaGGCACCAGATATCACTGTACACATTTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: NLFLSSNLKSQC*APDITVHILKP
Trigger: GGGTTTTAAAATGTGTACAGTGATATCTGGTGCCAAACATTGGCTCTTCAAATTGCTACTTAAGAATAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACCGAATCCAAGGCCCTTaGGCGAGTCCCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNRIQGP*ASPISP
Trigger: GGGGGAGATGGGACTCGCCAAAGGGCCTTGGATTCG...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS TCA 90 bp CCAGGCAATCAAGGTGGGGCTGATCCAAGTCTTCTTGGCTCATCCTaGGCCCCTCACTATGCATGTTCCTTGGTGCAAGCCTCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: PGNQGGADPSLLGSS*APHYACSLVQASLL
Trigger: AAGAAGCGAGGCTTGCACCAAGGAACATGCATAGTGAGGGGCTCAGGATGAGCCAAGAAGACTTGGATCAGCCCCACCTTGATTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532128.5
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACCACATGGACTCCATTTaGGTTCAGGGCACAGCCCAG +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNHMDSI*VQGTAQ
Trigger: CTGGGCTGTGCCCTGAACCAAAATGGAGTCCATGTG...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTACAAACCTGGAGGATGTaGTCTGTGCCCCTGACGTTG +
Preference number: 5 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLQTWRM*SVPLTL
Trigger: CAACGTCAGGGGCACAGACAACATCCTCCAGGTTTG...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAACCGCTCTTCCCTTTTaGCAGGTGGGAGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLTALPF*QVGAVW
Trigger: CCAAACTGCTCCCACCTGCAAAAAGGGAAGAGCGGT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACACAAAAATTAGCCGGTaGTGGTGGTGGGCGCCTGTA +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNTKISR*WWWAPV
Trigger: TACAGGCGCCCACCACCACAACCGGCTAATTTTTGT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACGAGCCCTGTAAGAATTaGGGGTGGGAGAGGATTATG +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNEPCKN*GWERIM
Trigger: CATAATCCTCTCCCACCCCAAATTCTTACAGGGCTC...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS CCA 90 bp TCTGCAACCTCATTGTGGTTCCTGCAGTTCCCAGAGAAAATGAATTaGAGGTGGCCCATCTTCTCCCATGTGGCACAGGTAGCACTGATG +
Preference number: 5 (lower is better)
Translates to: SATSLWFLQFPEKMN*RWPIFSHVAQVALM
Trigger: CATCAGTGCTACCTGTGCCACATGGGAGAAGATGGGCCACCTCCAATTCATTTTCTCTGGGAACTGCAGGAACCACAATGAGGTTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534209.1
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTCTGTGCCCCTGACGTaGACTTCTTTGATCAGGTTT +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNSVPLT*TSLIRF
Trigger: AAACCTGATCAAAGAAGTCAACGTCAGGGGCACAGA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACGAGACAGTAACAGAATaGGGGAGATATGGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNETVTE*GRYGSR
Trigger: CCTGCTTCCATATCTCCCCAATTCTGTTACTGTCTC...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCCCAATACAGGGCTCCTaGTTGCTCACACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: STYLGWEMKMEAMGLGELPIQGS*LLTHPS
Trigger: GGAAGGATGTGTGAGCAACAAGGAGCCCTGTATTGG...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACGAGGACACTTTCCTTTaGAGATCTTTTGGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNEDTFL*RSFGVH
Trigger: ATGGACCCCAAAAGATCTCAAAAGGAAAGTGTCCTC...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAGGGATCTGGGCCAATTaGGTGTTTTTCACACGCATT +
Preference number: 5 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLGIWAN*VFFTRI
Trigger: AATGCGTGTGAAAAACACCAAATTGGCCCAGATCCC...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAAAAAGAGGCTCTAGGTaGGCTGGAAAAGTCAGCACT +
Preference number: 5 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLKRGSR*AGKVST
Trigger: AGTGCTGACTTTTCCAGCCAACCTAGAGCCTCTTTT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACCTGATAAATCCCCTGTaGGTTGAAAGACACTTGCCT +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNLINPL*VERHLP
Trigger: AGGCAAGTGTCTTTCAACCAACAGGGGATTTATCAG...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACTCAATACATTCCTCATaGGAAGCTGTCTTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNSIHSS*EAVFRE
Trigger: CTCTCTGAAGACAGCTTCCAATGAGGAATGTATTGA...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTAAGTACCACTGCCAGCTaGAATGGAAAGGGATATAGT +
Preference number: 5 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLSTTAS*NGKGYS
Trigger: ACTATATCCCTTTCCATTCAAGCTGGCAGTGGTACT...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS TCA 90 bp TCCCAAACAAAACACTCCGAGTCACGACTTCCAGAACTTCTGCCATaGCCATGGGCTTTAAACCATTCCACTGCTTCCTGGAGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: SQTKHSESRLPELLP*PWALNHSTASWRSN
Trigger: ATTTGACCTCCAGGAAGCAGTGGAATGGTTTAAAGCCCATGGTCATGGCAGAAGTTCTGGAAGTCGTGACTCGGAGTGTTTTGTTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS TCA 90 bp TCTCAGCCAACTGTGATCACCTTATTTCTGGCCCCTCCTTCACAGTaGCAGAATCACAGAAGAAGGCAGCCACATGAGAACTGCTATAAT +
Preference number: 5 (lower is better)
Translates to: SQPTVITLFLAPPSQ*QNHRRRQPHENCYN
Trigger: ATTATAGCAGTTCTCATGTGGCTGCCTTCTTCTGTGATTCTGTCACTGTGAAGGAGGGGCCAGAAATAAGGTGATCACAGTTGGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTATCCAAATACACTTGTaGCAGGCTCTGAGGGCACAC +
Preference number: 5 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGIQIHL*QALRAH
Trigger: GTGTGCCCTCAGAGCCTGCAACAAGTGTATTTGGAT...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTATCATCTGTAACAGTTaGTGGGTGGCCAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGIICNS*WVARQC
Trigger: GCACTGTCTGGCCACCCACAAACTGTTACAGATGAT...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGTACATATTTGGGCTGGGAGATGAAAATGGAGGCCATGGGCTTAGGTGAGCTCGACATCCATGTGGAGTaGCAGAAGTACTTAGATATG +
Preference number: 5 (lower is better)
Translates to: STYLGWEMKMEAMGLGELDIHVE*QKYLDM
Trigger: CATATCTAAGTACTTCTGCAACTCCACATGGATGTC...GAGCTCACCTAAGCCCATGGCCTCCATTTTCATCTCCCAGCCCAAATATGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTGCTGGGAGGGACTTTTaGTCACCAAAAAGGAGCATG +
Preference number: 5 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGAGRDF*SPKRSM
Trigger: CATGCTCCTTTTTGGTGACAAAAAGTCCCTCCCAGC...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGCAACAAGGTAAGAGTTaGGGCCAGGCTCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLQQGKS*GQARWL
Trigger: GAGCCACCGAGCCTGGCCCAAACTCTTACCTTGTTG...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CTTAAACATGGGTTAGGTGTGTCAAGTCTGGGAGAGGGCAGGGGTCAGGGATTATCTACAGGCTGGACTTaGCATTTTCATTACTTCGAA +
Preference number: 5 (lower is better)
Translates to: LKHGLGVSSLGEGRGQGLSTGWT*HFHYFE
Trigger: TTCGAAGTAATGAAAATGCAAAGTCCAGCCTGTAGA...TAATCCCTGACCCCTGCCCTCTCCCAGACTTGACACACCTAACCCATGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGGCTGGGCGAACCGGAGATTTGGAAAGCAATACAAGGTAGAAGCAGCCCCAACATATTTCTTTTCCACTaGGGCCCAAACTTAAGGTAT +
Preference number: 5 (lower is better)
Translates to: RLGEPEIWKAIQGRSSPNIFLFH*GPNLRY
Trigger: ATACCTTAAGTTTGGGCCCAAGTGGAAAAGAAATAT...GTTGGGGCTGCTTCTACCTTGTATTGCTTTCCAAATCTCCGGTTCGCCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATGAATGGCTATGTGTGTaGAGGAGCGCTTTGTATGCT +
Preference number: 5 (lower is better)
Translates to: CYSERTDSRASYSAVLHDEWLCV*RSALYA
Trigger: AGCATACAAAGCGCTCCTCAACACACATAGCCATTC...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTTTCCACCCTGCTGTCTaGGATGACCTGCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSFHPAV*DDLLWG
Trigger: TCCCCAGAGCAGGTCATCCAAGACAGCAGGGTGGAA...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTAAAGACGACCCCCGTTaGAAAGAAAGAGGGCACAGA +
Preference number: 5 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITKDDPR*KERGHR
Trigger: TCTGTGCCCTCTTTCTTTCAAACGGGGGTCGTCTTT...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTCACATCCTTCCTTCATaGCGACCCTCCATCAATCAT +
Preference number: 5 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITHILPS*RPSINH
Trigger: ATGATTGATGGAGGGTCGCAATGAAGGAAGGATGTG...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CAACTTGAGTTCAATGAGTTCCTGGTGTGCCCAGGTTCTAAAATACAGAAGGGTGAGTTCCTGAAATCATaGGTTCTGATCATTCCCCTG +
Preference number: 5 (lower is better)
Translates to: QLEFNEFLVCPGSKIQKGEFLKS*VLIIPL
Trigger: CAGGGGAATGATCAGAACCAATGATTTCAGGAACTC...ACCCTTCTGTATTTTAGAACCTGGGCACACCAGGAACTCATTGAACTCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGATACAGGGCTCCTTGTaGCTCACACATCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLIQGSL*LTHPSF
Trigger: GAAGGAAGGATGTGTGAGCAACAAGGAGCCCTGTAT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTGAGCCTCTCAGCATCTaGCAAGGGAGCCAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTEPLSI*QGSQCL
Trigger: TAAACACTGGCTCCCTTGCAAGATGCTGAGAGGCTC...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGGCTCTGCAATTGACTTaGTCCGAGAGTAGTGATCAG +
Preference number: 5 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLALQLT*SESSDQ
Trigger: CTGATCACTACTCTCGGACAAAGTCAATTGCAGAGC...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGCCTTCTGCTCTGCAATaGACTTTGTCCGAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLPSALQ*TLSESS
Trigger: ACTACTCTCGGACAAAGTCAATTGCAGAGCAGAAGG...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTACGACAAAGCAACACTaGCCTCTTTTATACACCATG +
Preference number: 5 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITTTKQH*PLLYTM
Trigger: CATGGTGTATAAAAGAGGCAAGTGTTGCTTTGTCGT...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACTGACGTTGACTTCTTaGATCAGGTTTCGATTGAGT +
Preference number: 5 (lower is better)
Translates to: SGLLSMALTSMLLTKYMELTLTS*IRFRLS
Trigger: ACTCAATCGAAACCTGATCAAAGAAGTCAACGTCAG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp TGTTACAGTGAAAGGACCGATTCCAGAGCTTCCTACTCTGCCGTTTTACATGATGGAAATAAGTATATCTaGCCCTCTCAGAAATTCAAG +
Preference number: 5 (lower is better)
Translates to: CYSERTDSRASYSAVLHDGNKYI*PSQKFK
Trigger: CTTGAATTTCTGAGAGGGCAAGATATACTTATTTCC...ATCATGTAAAACGGCAGAGTAGGAAGCTCTGGAATCGGTCCTTTCACTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTCTGTCTTCTTTCCACTaGGGTTCCTATGCAACAGTG +
Preference number: 5 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSLSSFH*GSYATV
Trigger: CACTGTTGCATAGGAACCCAAGTGGAAAGAAGACAG...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTAGCACCAATCTTAAATaGCTGGGATCAGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSSTNLK*LGSVKA
Trigger: GGCCTTCACTGATCCCAGCAATTTAAGATTGGTGCT...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCCCAGTGCTCACCTCCTaGTTGAAAGATAAGAAACAC +
Preference number: 5 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGPVLTS*LKDKKH
Trigger: GTGTTTCTTATCTTTCAACAAGGAGGTGAGCACTGG...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp CTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTGAGGGCAAAAGCTTGATGATTTaGGGTTGGCTTTCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: LNFTNRVYPNTLVAGSEGKSLMI*GWLSSP
Trigger: GGGGCTAGAAAGCCAACCCAAAATCATCAAGCTTTT...GCCCTCAGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACCCATTTCTGATAACTaGACCTCCAAAGATGACATT +
Preference number: 5 (lower is better)
Translates to: SGLLSMALTSMLLTKYMEPISDN*TSKDDI
Trigger: AATGTCATCTTTGGAGGTCAAGTTATCAGAAATGGG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGTTGAAGAGCCAATGTTaGGCACCAGATATCACTGTA +
Preference number: 5 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLLKSQC*APDITV
Trigger: TACAGTGATATCTGGTGCCAAACATTGGCTCTTCAA...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp GAATGTTCTTATTGCCTCAGGCTGGGAGTCTCAGGTGTAAAAGAAGCAATAACTTTCTTAAGTAGCAATTaGAAGAGCCAATGTTTGGCA +
Preference number: 5 (lower is better)
Translates to: ECSYCLRLGVSGVKEAITFLSSN*KSQCLA
Trigger: TGCCAAACATTGGCTCTTCAAATTGCTACTTAAGAA...AGTTATTGCTTCTTTTACACCTGAGACTCCCAGCCTGAGGCAATAAGAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGCCAAACTTAAGGTATTaGCTGTGCTCAGAGACACTT +
Preference number: 5 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLPNLRY*LCSETL
Trigger: AAGTGTCTCTGAGCACAGCAAATACCTTAAGTTTGG...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGACAGATGAGAGGCATTaGCTCAAAGTCACATTGCAA +
Preference number: 5 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLTDERH*LKVTLQ
Trigger: TTGCAATGTGACTTTGAGCAAATGCCTCTCATCTGT...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp TCTGGGCTATTAAGTATGGCTCTAACATCCATGCTCCTCACAAAATACATGGAACTGCTTAAAGGTATGTaGGTGCCAAATATACATGAT +
Preference number: 5 (lower is better)
Translates to: SGLLSMALTSMLLTKYMELLKGM*VPNIHD
Trigger: ATCATGTATATTTGGCACCAACATACCTTTAAGCAG...TTCCATGTATTTTGTGAGGAGCATGGATGTTAGAGCCATACTTAATAGCCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTCTTGCCTGGATCACTTaGCTACATGCAATTTCTTTG +
Preference number: 5 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSLAWIT*LHAISL
Trigger: CAAAGAAATTGCATGTAGCAAAGTGATCCAGGCAAG...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGGACAGTATTTTACTCTaGGATCTGAAATATGGCTCC +
Preference number: 5 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLDSILL*DLKYGS
Trigger: GGAGCCATATTTCAGATCCAAGAGTAAAATACTGTC...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTAATACGGAAATACCTTaGTGTATTTCCTTCCCCTAC +
Preference number: 5 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSNTEIP*CISFPY
Trigger: GTAGGGGAAGGAAATACACAAAGGTATTTCCGTATT...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTAATTATGAACGCAACTaGAGTTCAATGAGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSNYERN*SSMSSW
Trigger: CCAGGAACTCATTGAACTCAAGTTGCGTTCATAATT...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTTGTAGTGAACTAGATTaGGCCTCGGTCATAATTACT +
Preference number: 5 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTCSELD*ASVIIT
Trigger: AGTAATTATGACCGAGGCCAAATCTAGTTCACTACA...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp ACTGATTTAGAGGAGAGACTAGGACATGTGCAATGTGACCAATATCAGTATTTGGGTGACAGGTTAATATaGATCATTAGCTTCATGTTG +
Preference number: 5 (lower is better)
Translates to: TDLEERLGHVQCDQYQYLGDRLI*IISFML
Trigger: CAACATGAAGCTAATGATCAATATTAACCTGTCACC...CAAATACTGATATTGGTCACATTGCACATGTCCTAGTCTCTCCTCTAAATCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp TTTGTGTATTTCCTTCCCCTACTGAATAGGATTGACCTGCATAACCAATATACTGAGCGCTTTGTATGCTaGAATTTAATCCTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: FVYFLPLLNRIDLHNQYTERFVC*NLILKR
Trigger: TCTTTTGAGGATTAAATTCAAGCATACAAAGCGCTC...AGTATATTGGTTATGCAGGTCAATCCTATTCAGTAGGGGAAGGAAATACACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS-3UTR CAA 90 bp AGAGGCCTAAACTTTACAAATAGAGTATATCCAAATACACTTGTTGCAGGCTCTAGCATTCCACAGGGATaGCTCATCTATTTGTATTTT +
Preference number: 5 (lower is better)
Translates to: RGLNFTNRVYPNTLVAGSSIPQG*LIYLYF
Trigger: AAAATACAAATAGATGAGCAATCCCTGTGGAATGCT...AGAGCCTGCAACAAGTGTATTTGGATATACTCTATTTGTAAAGTTTAGGCCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS TCA 72 bp CAAGGTGGGGCTGATCCAAGTCTTCTTGGCTCATCCTaGGCCCCTCACTATGCATGTTCCTTGGTGCAAGCC +
Preference number: 6 (lower is better)
Translates to: QGGADPSLLGSS*APHYACSLVQA
Trigger: GGCTTGCACCAAGGAACATGCATAGTGAGGGGCTCAGGATGAGCCAAGAAGACTTGGATCAGCCCCACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532128.5
CDS TCA 72 bp TGTAGCATTCGCCTCCAGCACCTTCTGCTCTGCAATTaGCTTTGTCCGAGAGTAGTGATCAGGGTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: CSIRLQHLLLCN*LCPRVVIRVEV
Trigger: CACCTCCACCCTGATCACTACTCTCGGACAAAGTCAATTGCAGAGCAGAAGGTGCTGGAGGCGAATGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328945.7
ENST00000532128.5
ENST00000534209.1
CDS CAA 90 bp TTCTGCAACCTCATTGTGGTTCCTGCAGTTCCCAGAGAAAATGAATaGGAGGTGGCCCATCTTCTCCCATGTGGCACAGGTAGCACTGAT +
Preference number: 6 (lower is better)
Translates to: FCNLIVVPAVPRENE*EVAHLLPCGTGSTD
Trigger: ATCAGTGCTACCTGTGCCACATGGGAGAAGATGGGCCACCTCCAATTCATTTTCTCTGGGAACTGCAGGAACCACAATGAGGTTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534209.1
CDS TCA 72 bp AAACACTCCGAGTCACGACTTCCAGAACTTCTGCCATaGCCATGGGCTTTAAACCATTCCACTGCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: KHSESRLPELLP*PWALNHSTASW
Trigger: CCAGGAAGCAGTGGAATGGTTTAAAGCCCATGGTCATGGCAGAAGTTCTGGAAGTCGTGACTCGGAGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS GCA 72 bp TCCAAGTCTTCTTGGCTCATCCTGAGCCCCTCACTATaGATGTTCCTTGGTGCAAGCCTCGCTTCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: SKSSWLILSPSL*MFLGASLASSN
Trigger: ATTTGAAGAAGCGAGGCTTGCACCAAGGAACATGCATAGTGAGGGGCTCAGGATGAGCCAAGAAGACTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532128.5
CDS TCA 72 bp ACTGTGATCACCTTATTTCTGGCCCCTCCTTCACAGTaGCAGAATCACAGAAGAAGGCAGCCACATGAGAAC +
Preference number: 6 (lower is better)
Translates to: TVITLFLAPPSQ*QNHRRRQPHEN
Trigger: GTTCTCATGTGGCTGCCTTCTTCTGTGATTCTGTCACTGTGAAGGAGGGGCCAGAAATAAGGTGATCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS CAA 72 bp GTTAAGACTCCCAGTTTGGAAATCTGGGCATTAGACTaGGCTCTTCCACCAATTCCCTGTGTTACCCTAGGC +
Preference number: 6 (lower is better)
Translates to: VKTPSLEIWALD*ALPPIPCVTLG
Trigger: GCCTAGGGTAACACAGGGAATTGGTGGAAGAGCCAAGTCTAATGCCCAGATTTCCAAACTGGGAGTCTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534209.1
CDS TCA 72 bp AAACCCATGTTTCTTGAGAACCATCTCAGCCAACTGTaGTCACCTTATTTCTGGCCCCTCCTTCACAGTGAC +
Preference number: 6 (lower is better)
Translates to: KPMFLENHLSQL*SPYFWPLLHSD
Trigger: GTCACTGTGAAGGAGGGGCCAGAAATAAGGTGATCACAGTTGGCTGAGATGGTTCTCAAGAAACATGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328945.7
CDS CAA 72 bp CAGGTAGGGCAGAGATTCATCCCCATTTCTGATAACTaGACCTCCAAAGATGACATTGAAAGTGCTGGTGTA +
Preference number: 6 (lower is better)
Translates to: QVGQRFIPISDN*TSKDDIESAGV
Trigger: TACACCAGCACTTTCAATGTCATCTTTGGAGGTCAAGTTATCAGAAATGGGGATGAATCTCTGCCCTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328945.7
ENST00000532128.5
ENST00000534209.1