RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SDR39U1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100445

Ensembl transcript IDs: ENST00000399395.7, ENST00000399395.8, ENST00000538105.6, ENST00000544691.6, ENST00000553343.5, ENST00000553546.1, ENST00000553930.5, ENST00000553937.1, ENST00000554698.5, ENST00000554947.5, ENST00000555225.5, ENST00000555355.5, ENST00000555365.5, ENST00000555561.5, ENST00000555778.1, ENST00000555830.1, ENST00000556175.1, ENST00000556249.1, ENST00000556262.5, ENST00000556523.1, ENST00000556548.5, ENST00000556707.5

Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGGAGCAACAGAACAATaGGAAAGAGGACTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPGATEQ*ERGLGE
Trigger: CTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCC...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399395.7
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR TCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCCGCTGGGGAGAGGGATaGAGGCTCGGCGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTRWGEG*RLGGPG
Trigger: CCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGCG...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCGCTCGGCAGCCCCGATaGAGCGAGCTCATCCCACGT +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTARQPR*SELIPR
Trigger: ACGTGGGATGAGCTCGCTGCATCGGGGCTGCCGAGC...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp TTCACAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGCAGCATGTGGCCCATaGCACCACCCCCACGGCCCA +
Preference number: 4 (lower is better)
Translates to: FTVPNLEACEEQASGPCHAACGP*HHPHGP
Trigger: TGGGCCGTGGGGGTGGTGCCATGGGCCACATGCTGC...GTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCAAGGGCAGCAGCATGTaGCCCATGGCACCACCCCCA +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTKGSSM*PMAPPP
Trigger: TGGGGGTGGTGCCATGGGCCACATGCTGCTGCCCTT...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCCCCGTGCACGTGGTTTaGTTCAAGGGCATGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTPVHVV*FKGMGQ
Trigger: CTGACCCATGCCCTTGAAGCAAACCACGTGCACGGG...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCCAGGCCTCAGGCCCTTaGCACGACCTACTTAGGCTA +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTQASGP*HDLLRL
Trigger: TAGCCTAAGTAGGTCGTGGCAAGGGCCTGAGGCCTG...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCGCAGCATGTGGCCCATaGCACCACCCCCACGGCCCA +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEAAACGP*HHPHGP
Trigger: TGGGCCGTGGGGGTGGTGCCATGGGCCACATGCTGC...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR TCA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGACGCTGGGGAGAGGGATaGAGGCTCGGCGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRRWGEG*RLGGPG
Trigger: CCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGCG...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCCCATTCAGGACCCCGTaGACGTGGTTTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTPFRTP*TWFASR
Trigger: CCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGG...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCACCAACGTCACTTCGTaGCCTCTGGCATTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTTNVTS*PLAFSS
Trigger: GCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGT...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp TTCACAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACATATTCCCGTGGAGTTaGGGTGGGGGCGCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: FTVPNLEACEEQASGPCHIFPWS*GGGAFR
Trigger: ACGGAAGGCGCCCCCACCCCAACTCCACGGGAATAT...GTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR TCA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCGAGCTCATCCCACGTaGTCCGGCCGGGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQRAHPT*SGRARA
Trigger: AGCCCGGGCCCGGCCGGATCACGTGGGATGAGCTCG...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR GCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCGAGAAGTGGGGCAGCTaGAGGACATGTAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTEKWGS*RTCRET
Trigger: GGTTTCTCTACATGTCCTGCAGCTGCCCCACTTCTC...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCTTTGCTTCAAGGGCATaGGTCAGGATTCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTFASRA*VRIPAR
Trigger: CCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAA...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCATTAGTGGCGGAGGATaGAGCCACTCCATTCAGGAC +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTISGGG*SHSIQD
Trigger: GTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAAT...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR TCA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCCGGCGCCATCCCATCTaGCACCAGGCTTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSARRHPI*HQASPH
Trigger: GTGGGGAGAAGCCTGGTGTCAGATGGGATGGCGCCG...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR TCA 90 bp CCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGATGCTGACTTGGCTCTaGGCGCACCACCACCTGGCG +
Preference number: 4 (lower is better)
Translates to: PDGFSSLEELSLFTVPNLMLTWL*AHHHLA
Trigger: CGCCAGGTGGTGGTGCGCTCAGAGCCAAGTCAGCAT...CAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS-3UTR TCA 90 bp GAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGTCTCTCCGGCCAGGTTaGCGGCGGCATCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: EQQNNGKEDWERNLRTRWSLRPG*RRHRSS
Trigger: CGAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGA...CCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR TCA 90 bp AACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTCTCCGGCCAGGTTaGCGGCGGCATCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: NNGKEDWERNLRTRWLQLSLRPG*RRHRSS
Trigger: CGAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGA...GAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR TCA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGATTCATTCCATCCACGTaGTCCGGCCGGGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRFIPST*SGRARA
Trigger: AGCCCGGGCCCGGCCGGATCACGTGGATGGAATGAA...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555365.5
CDS-3UTR GCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCCAGGCCTCAGGCCCTTaGCACGACCTACTTAGGCTA +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEAQASGP*HDLLRL
Trigger: TAGCCTAAGTAGGTCGTGGCAAGGGCCTGAGGCCTG...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGCTAAGACCCAGGCCTTaGGGGGTTGTGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PDGFSSLEELSLFTVPNLLRPRP*GVVGLW
Trigger: CCAAAGCCCCACAACCCCCCAAGGCCTGGGTCTTAG...CAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553930.5
ENST00000555365.5
CDS-3UTR CCA 90 bp AACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCGCAGCATGTGGCCCATaGCACCACCCCCACGGCCCA +
Preference number: 4 (lower is better)
Translates to: NNGKEDWERNLRTRWLQLAACGP*HHPHGP
Trigger: TGGGCCGTGGGGGTGGTGCCATGGGCCACATGCTGC...GAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGGCAGCATGTGGCCCATaGCACCACCCCCACGGCCCA +
Preference number: 4 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQAACGP*HHPHGP
Trigger: TGGGCCGTGGGGGTGGTGCCATGGGCCACATGCTGC...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCATCCAGGGGAAGAATTaGTGGCCTGAGCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEAIQGKN*WPEPMG
Trigger: CCCCATCGGCTCAGGCCACCAATTCTTCCCCTGGAT...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp TTCACAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGCAGCACCCAAGGTCTaGGCAAACTCAGCATTAGTG +
Preference number: 4 (lower is better)
Translates to: FTVPNLEACEEQASGPCHAAPKV*ANSALV
Trigger: CACTAATGCTGAGTTTGCCCAGACCTTGGGTGCTGC...GTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp TTCACAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACAATACTGGTAGCCAGTaGCCAGTGTTCGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: FTVPNLEACEEQASGPCHNTGSQ*PVFAVG
Trigger: TCCCACAGCGAACACTGGCCACTGGCTACCAGTATT...GTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTTCCGTCCCCGCTGTaGCACCCTCTTCCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: EQWERGLGEESKNQMASALPSPL*HPLPAP
Trigger: TGGCGCCGGAAGAGGGTGCCACAGCGGGGACGGAAG...AGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR TCA 90 bp GCTGCAGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGCGCTGGGGAGAGGGATaGAGGCTCGGCGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAGHVEKPNWEILQGVEKRWGEG*RLGGPG
Trigger: CCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGCG...CTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR GCA 90 bp CCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGCAGGCCTCAGGCCCTTaGCACGACCTACTTAGGCTA +
Preference number: 4 (lower is better)
Translates to: PDGFSSLEELSLFTVPNLQASGP*HDLLRL
Trigger: TAGCCTAAGTAGGTCGTGGCAAGGGCCTGAGGCCTG...CAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCCTGGCATTCAGCAGCTaGGTTAGGGCTGTCCCAATG +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEALAFSS*VRAVPM
Trigger: CATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAG...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAGCGCACCACCACCTaGCGTGTAGAATCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PDGFSSLEELSLFTVPNLERTTT*RVESPG
Trigger: TCCTGGAGATTCTACACGCCAGGTGGTGGTGCGCTC...CAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCGGCCAGTGTTCGCTGTaGGATCACCTTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSAGQCSL*DHLLAL
Trigger: GAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCC...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGGCCAGTGTTCGCTGTaGGATCACCTTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: DGFSSLEELSLFTVPNLEGQCSL*DHLLAL
Trigger: GAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCC...TTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCACTCCGCAGTCAGACTaGGCTGGTAGTAAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEATPQSD*AGSKLR
Trigger: CCGAAGCTTACTACCAGCCCAGTCTGACTGCGGAGT...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538105.6
CDS-3UTR TCA 90 bp TCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGGCCTTGCGAGCTCATCCCACGTaGTCCGGCCGGGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: SYKELKRLMSQPDEITALRAHPT*SGRARA
Trigger: AGCCCGGGCCCGGCCGGATCACGTGGGATGAGCTCG...CAAGGCCGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR GCA 90 bp GATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAACAGGCCTCAGGCCCTTaGCACGACCTACTTAGGCTA +
Preference number: 4 (lower is better)
Translates to: DGFSSLEELSLFTVPNLEQASGP*HDLLRL
Trigger: TAGCCTAAGTAGGTCGTGGCAAGGGCCTGAGGCCTG...TTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCGAGAAGTGGGGCAGCTaGAGGACATGTAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEAEKWGS*RTCRET
Trigger: GGTTTCTCTACATGTCCTGCAGCTGCCCCACTTCTC...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR GCA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCAGGCCAAGGCCAGGTTaGCTGTGCACTAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSARPRPG*LCTRQC
Trigger: GCACTGTCTAGTGCACAGGCAACCTGGCCTTGGCCT...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR CCA 90 bp CCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGCTGGCATTCAGCAGCTaGGTTAGGGCTGTCCCAATG +
Preference number: 4 (lower is better)
Translates to: PDGFSSLEELSLFTVPNLLAFSS*VRAVPM
Trigger: CATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAG...CAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGAAGGGCAGCAGCATGTaGCCCATGGCACCACCCCCA +
Preference number: 4 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQKGSSM*PMAPPP
Trigger: TGGGGGTGGTGCCATGGGCCACATGCTGCTGCCCTT...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGAAAGGGCAGCAGCATGTaGCCCATGGCACCACCCCCA +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRKGSSM*PMAPPP
Trigger: TGGGGGTGGTGCCATGGGCCACATGCTGCTGCCCTT...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCATCCAGGGGAAGAATTaGTGGCCTGAGCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSAIQGKN*WPEPMG
Trigger: CCCCATCGGCTCAGGCCACCAATTCTTCCCCTGGAT...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCTTTGCTTCAAGGGCATaGGTCAGGATTCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEAFASRA*VRIPAR
Trigger: CCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAA...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCAGGACCCCGTGCACGTaGTTTGCTTCAAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSARTPCT*FASRAW
Trigger: CCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCT...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCGCAGCACCCAAGGTCTaGGCAAACTCAGCATTAGTG +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEAAAPKV*ANSALV
Trigger: CACTAATGCTGAGTTTGCCCAGACCTTGGGTGCTGC...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCAATCTAAGAACCAGATaGCTTCAGCTCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTNLRTR*LQLSRG
Trigger: TCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAGATT...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCCTTGAGACAATAAGGTaGAGCAACAGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTLETIR*SNRTMG
Trigger: TCCCATTGTTCTGTTGCTCCACCTTATTGTCTCAAG...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR TCA 90 bp GCAGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTCGAGCTCATCCCACGTaGTCCGGCCGGGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: AGHVEKPNWEILQGVEKIRAHPT*SGRARA
Trigger: AGCCCGGGCCCGGCCGGATCACGTGGGATGAGCTCG...AATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR TCA 90 bp GATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAACTCGCGATGCAGAGGTaGCACAGGTCACAGGGATTA +
Preference number: 4 (lower is better)
Translates to: DGFSSLEELSLFTVPNLELAMQR*HRSQGL
Trigger: TAATCCCTGTGACCTGTGTCACCTCTGCATCGCGAG...TTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR TCA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGAACCTTCGGAGAGGGTTaGGGATGTTCTCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRTFGEG*GCSLRP
Trigger: TGGCCGGAGAGAACATCCTCAACCCTCTCCGAAGGT...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR GCA 90 bp CCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGTCCAGGAAGCCTGGCTaGAGCTTCCCATTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: PDGFSSLEELSLFTVPNLSRKPG*SFPFGY
Trigger: GTAACCAAATGGGAAGCTGCAGCCAGGCTTCCTGGA...CAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp GCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTAGGCCAGGTTGCCTGTaGACTAGACAGTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ATEQWERGLGEESKNQMARPGCL*TRQCPP
Trigger: GGGAGGGCACTGTCTAGTGCACAGGCAACCTGGCCT...AGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR GCA 90 bp CCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGCACTGTCCTCCCTGTaGTCTAGTGGGTATCAGCTT +
Preference number: 4 (lower is better)
Translates to: PDGFSSLEELSLFTVPNLALSSL*SSGYQL
Trigger: AAGCTGATACCCACTAGAGCACAGGGAGGACAGTGC...CAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR CCA 90 bp GATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAACTGGCATTCAGCAGCTaGGTTAGGGCTGTCCCAATG +
Preference number: 4 (lower is better)
Translates to: DGFSSLEELSLFTVPNLELAFSS*VRAVPM
Trigger: CATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAG...TTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCGTCAAAGTCCCCTCCTaGGCTGTCTTCATCATACTC +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEAVKVPS*AVFIIL
Trigger: GAGTATGATGAAGACAGCCCAGGAGGGGACTTTGAC...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAATGTGGGATCACCTTCTaGCCCTCCAGCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: DGFSSLEELSLFTVPNLECGITF*PSSSMM
Trigger: CATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACA...TTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGAGGCCAGTGTTCGCTGTaGGATCACCTTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRGQCSL*DHLLAL
Trigger: GAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCC...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTGGCCAGTGTTCGCTGTaGGATCACCTTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EQWERGLGEESKNQMASAGQCSL*DHLLAL
Trigger: GAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCC...AGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCGGAGCAACAGAACAATaGGAAAGAGGACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GFSSLEELSLFTVPNLEAGATEQ*ERGLGE
Trigger: CTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCC...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCATGGGTCAGGATTCCTaGCAGGTCCCCGATGTGTAT +
Preference number: 4 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSAMGQDS*QVPDVY
Trigger: ATACACATCGGGGACCTGGCAGGAATCCTGACCCAT...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp GAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCCCGTGCACGTGGTTTaGTTCAAGGGCATGGGTCAG +
Preference number: 4 (lower is better)
Translates to: EQQNNGKEDWERNLRTRWPVHVV*FKGMGQ
Trigger: CTGACCCATGCCCTTGAAGCAAACCACGTGCACGGG...CCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGACCATTCAGGACCCCGTaGACGTGGTTTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRPFRTP*TWFASR
Trigger: CCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGG...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCTTTTATTGCCTAAACTaGAGAGCATTCTCTACACAG +
Preference number: 4 (lower is better)
Translates to: QCLTWKPVRNRPQALATTFYCLN*RAFSTQ
Trigger: CTGTGTAGAGAATGCTCTGCAGTTTAGGCAATAAAA...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538105.6
ENST00000553930.5
CDS-3UTR CCA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGAACCAACGTCACTTCGTaGCCTCTGGCATTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRTNVTS*PLAFSS
Trigger: GCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGT...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGAGCTTTAGCCAGCAATTaGGTGGTCTCTAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRALASN*VVSRRL
Trigger: CAGCCGCCTAGAGACCACCCAATTGCTGGCTAAAGC...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553930.5
ENST00000555365.5
CDS-3UTR CCA 90 bp AATCTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTCTAAGACCCAGGCCTTaGGGGGTTGTGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: NLRTRWLQLSRGAEPIHSLRPRP*GVVGLW
Trigger: CCAAAGCCCCACAACCCCCCAAGGCCTGGGTCTTAG...ACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553930.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTGAGCGCACCACCACCTaGCGTGTAGAATCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ATEQWERGLGEESKNQMAERTTT*RVESPG
Trigger: TCCTGGAGATTCTACACGCCAGGTGGTGGTGCGCTC...AGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGGAGCGCACCACCACCTaGCGTGTAGAATCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EQQNNGKEDWERNLRTRWERTTT*RVESPG
Trigger: TCCTGGAGATTCTACACGCCAGGTGGTGGTGCGCTC...CCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTATCCAGGGGAAGAATTaGTGGCCTGAGCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: ATEQWERGLGEESKNQMAIQGKN*WPEPMG
Trigger: CCCCATCGGCTCAGGCCACCAATTCTTCCCCTGGAT...AGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTTTGCTTCAAGGGCATaGGTCAGGATTCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSAFASRA*VRIPAR
Trigger: CCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAA...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGAAGGACCCCGTGCACGTaGTTTGCTTCAAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRRTPCT*FASRAW
Trigger: CCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCT...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTAGGACCCCGTGCACGTaGTTTGCTTCAAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: ATEQWERGLGEESKNQMARTPCT*FASRAW
Trigger: CCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCT...AGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAATTAGTGGCGGAGGATaGAGCCACTCCATTCAGGAC +
Preference number: 4 (lower is better)
Translates to: DGFSSLEELSLFTVPNLEISGGG*SHSIQD
Trigger: GTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAAT...TTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCAATACTGGTAGCCAGTaGCCAGTGTTCGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSANTGSQ*PVFAVG
Trigger: TCCCACAGCGAACACTGGCCACTGGCTACCAGTATT...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp TTCACAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACAATCTAAGAACCAGATaGCTTCAGCTCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: FTVPNLEACEEQASGPCHNLRTR*LQLSRG
Trigger: TCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAGATT...GTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR TCA 90 bp GAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTATCTTCGGAGAGGGTTaGGGATGTTCTCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: EQWERGLGEESKNQMASAIFGEG*GCSLRP
Trigger: TGGCCGGAGAGAACATCCTCAACCCTCTCCGAAGAT...AGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS-3UTR GCA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCCATTCAGGACCCCGTaGACGTGGTTTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQPFRTP*TWFASR
Trigger: CCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGG...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTGGCATTCAGCAGCTaGGTTAGGGCTGTCCCAATG +
Preference number: 4 (lower is better)
Translates to: EQWERGLGEESKNQMASALAFSS*VRAVPM
Trigger: CATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAG...AGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp AACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCGCTTTAGCCAGCAATTaGGTGGTCTCTAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: NNGKEDWERNLRTRWLQLALASN*VVSRRL
Trigger: CAGCCGCCTAGAGACCACCCAATTGCTGGCTAAAGC...GAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553930.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGTGGGATCACCTTCTaGCCCTCCAGCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRCGITF*PSSSMM
Trigger: CATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACA...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp AACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTGTGGGATCACCTTCTaGCCCTCCAGCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: NNGKEDWERNLRTRWLQLCGITF*PSSSMM
Trigger: CATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACA...GAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTGTGGGATCACCTTCTaGCCCTCCAGCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: ATEQWERGLGEESKNQMACGITF*PSSSMM
Trigger: CATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACA...AGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGGAGCAACAGAACAATaGGAAAGAGGACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: DGFSSLEELSLFTVPNLEGATEQ*ERGLGE
Trigger: CTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCC...TTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR TCA 90 bp GAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGAGTAAGCTACACCTGTaGCTAAGACCCAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EQQNNGKEDWERNLRTRWSKLHL*LRPRPW
Trigger: CCAAGGCCTGGGTCTTAGTCACAGGTGTAGCTTACT...CCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553930.5
ENST00000555365.5
CDS-3UTR GCA 90 bp GAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTTCCAGGAAGCCTGGCTaGAGCTTCCCATTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: EQWERGLGEESKNQMASASRKPG*SFPFGY
Trigger: GTAACCAAATGGGAAGCTGCAGCCAGGCTTCCTGGA...AGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGTCCAGGAAGCCTGGCTaGAGCTTCCCATTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQSRKPG*SFPFGY
Trigger: GTAACCAAATGGGAAGCTGCAGCCAGGCTTCCTGGA...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp GCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTATGGGTCAGGATTCCTaGCAGGTCCCCGATGTGTAT +
Preference number: 4 (lower is better)
Translates to: ATEQWERGLGEESKNQMAMGQDS*QVPDVY
Trigger: ATACACATCGGGGACCTGGCAGGAATCCTGACCCAT...AGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATCACTTCGTGGCCTCTaGCATTCAGCAGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRSLRGL*HSAAGL
Trigger: TAACCCAGCTGCTGAATGCCAGAGGCCACGAAGTGA...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGAACTCCGCAGTCAGACTaGGCTGGTAGTAAGCTACAC +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRTPQSD*AGSKLH
Trigger: GTGTAGCTTACTACCAGCCCAGTCTGACTGCGGAGT...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553930.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGATTAGTGGCGGAGGATaGAGCCACTCCATTCAGGAC +
Preference number: 4 (lower is better)
Translates to: EQQNNGKEDWERNLRTRWISGGG*SHSIQD
Trigger: GTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAAT...CCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGAGCAGCACCCAAGGTCTaGGCAAACTCAGCATTAGTG +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRAAPKV*ANSALV
Trigger: CACTAATGCTGAGTTTGCCCAGACCTTGGGTGCTGC...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGAAATACTGGTAGCCAGTaGCCAGTGTTCGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRNTGSQ*PVFAVG
Trigger: TCCCACAGCGAACACTGGCCACTGGCTACCAGTATT...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGCTCGGCAGCCCCGATaGAGCGAGCTCATCCCACGT +
Preference number: 4 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPARQPR*SELIPR
Trigger: ACGTGGGATGAGCTCGCTGCATCGGGGCTGCCGAGC...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR GCA 90 bp AACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGCTCGGCAGCCCCGATaGAGCGAGCTCATCCCACGT +
Preference number: 4 (lower is better)
Translates to: NQTGKSYKELKRLMSQPDARQPR*SELIPR
Trigger: ACGTGGGATGAGCTCGCTGCATCGGGGCTGCCGAGC...ATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR GCA 90 bp GAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGTGGTCTCTAGGCGGCTaGCGATTACCTCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: EQQNNGKEDWERNLRTRWWSLGG*RLPLFG
Trigger: TCCAAAAAGAGGTAATCGGCAGCCGCCTAGAGACCA...CCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553930.5
ENST00000555365.5
CDS-3UTR GCA 90 bp GAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTTGGTCTCTAGGCGGCTaGCGATTACCTCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: EQWERGLGEESKNQMASAWSLGG*RLPLFG
Trigger: TCCAAAAAGAGGTAATCGGCAGCCGCCTAGAGACCA...AGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553930.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGAGTCAAAGTCCCCTCCTaGGCTGTCTTCATCATACTC +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRVKVPS*AVFIIL
Trigger: GAGTATGATGAAGACAGCCCAGGAGGGGACTTTGAC...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR TCA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGAATGAGATTACGGCCTTaGGACAATAAGGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRMRLRP*DNKVEQ
Trigger: TTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCAT...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp GGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGTCCCCCTCCTCGCGATaGAGAGGTGACACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GKSYKELKRLMSQPDEITSPSSR*RGDTGH
Trigger: GTGACCTGTGTCACCTCTGCATCGCGAGGAGGGGGA...CGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR CCA 90 bp AATCTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGTCAAAGTCCCCTCCTaGGCTGTCTTCATCATACTC +
Preference number: 4 (lower is better)
Translates to: NLRTRWLQLSRGAEPIHSVKVPS*AVFIIL
Trigger: GAGTATGATGAAGACAGCCCAGGAGGGGACTTTGAC...ACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp TCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGGCCTTGATCCAGGGGAAGAATTaGTGGCCTGAGCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: SYKELKRLMSQPDEITALIQGKN*WPEPMG
Trigger: CCCCATCGGCTCAGGCCACCAATTCTTCCCCTGGAT...CAAGGCCGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp GCTGCAGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGACAGGTTCTCATCAGTaGGGCACTGTCCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: AAGHVEKPNWEILQGVEKTGSHQ*GTVLPV
Trigger: CACAGGGAGGACAGTGCCCCACTGATGAGAACCTGT...CTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR TCA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGATGAGATTACGGCCTTaGGACAATAAGGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQMRLRP*DNKVEQ
Trigger: TTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCAT...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR GCA 90 bp GGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGCCCGTGCACGTGGTTTaGTTCAAGGGCATGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GKSYKELKRLMSQPDEITPVHVV*FKGMGQ
Trigger: CTGACCCATGCCCTTGAAGCAAACCACGTGCACGGG...CGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR GCA 90 bp GCAGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTCCCGTGCACGTGGTTTaGTTCAAGGGCATGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AGHVEKPNWEILQGVEKIPVHVV*FKGMGQ
Trigger: CTGACCCATGCCCTTGAAGCAAACCACGTGCACGGG...AATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp TCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGGCCTTGACCAACGTCACTTCGTaGCCTCTGGCATTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SYKELKRLMSQPDEITALTNVTS*PLAFSS
Trigger: GCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGT...CAAGGCCGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCATTTGGTTACGAGGTTaGAGAAAAAGTCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSAIWLRG*RKSQSP
Trigger: GGGACTTTGACTTTTTCTCCAACCTCGTAACCAAAT...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTGCAGCTTCCCATTTaGTTACGAGGTTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQLQLPI*LRGWRK
Trigger: TTTTCTCCAACCTCGTAACCAAATGGGAAGCTGCAG...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GCTGCAGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGTTTGCTTCAAGGGCATaGGTCAGGATTCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: AAGHVEKPNWEILQGVEKFASRA*VRIPAR
Trigger: CCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAA...CTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGACTTGAGACAATAAGGTaGAGCAACAGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRLETIR*SNRTMG
Trigger: TCCCATTGTTCTGTTGCTCCACCTTATTGTCTCAAG...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR TCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTAGCTTCGGAGAGGGTTaGGGATGTTCTCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPSFGEG*GCSLRP
Trigger: TGGCCGGAGAGAACATCCTCAACCCTCTCCGAAGCT...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538105.6
CDS-3UTR GCA 90 bp TCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGGCCTTGTCCAGGAAGCCTGGCTaGAGCTTCCCATTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: SYKELKRLMSQPDEITALSRKPG*SFPFGY
Trigger: GTAACCAAATGGGAAGCTGCAGCCAGGCTTCCTGGA...CAAGGCCGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR GCA 90 bp GGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGCCATTCAGGACCCCGTaGACGTGGTTTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GKSYKELKRLMSQPDEITPFRTP*TWFASR
Trigger: CCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGG...CGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGAATTTGGTTACGAGGTTaGAGAAAAAGTCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRIWLRG*RKSQSP
Trigger: GGGACTTTGACTTTTTCTCCAACCTCGTAACCAAAT...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp AATCTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTCTGCAGCTTCCCATTTaGTTACGAGGTTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NLRTRWLQLSRGAEPIHSLQLPI*LRGWRK
Trigger: TTTTCTCCAACCTCGTAACCAAATGGGAAGCTGCAG...ACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGAGCGCACCACCACCTaGCGTGTAGAATCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPERTTT*RVESPG
Trigger: TCCTGGAGATTCTACACGCCAGGTGGTGGTGCGCTC...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTAGGACCCCGTGCACGTaGTTTGCTTCAAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPRTPCT*FASRAW
Trigger: CCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCT...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp TCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGGCCTTGAATACTGGTAGCCAGTaGCCAGTGTTCGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SYKELKRLMSQPDEITALNTGSQ*PVFAVG
Trigger: TCCCACAGCGAACACTGGCCACTGGCTACCAGTATT...CAAGGCCGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGAATCTAAGAACCAGATaGCTTCAGCTCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQNLRTR*LQLSRG
Trigger: TCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAGATT...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGAAATCTAAGAACCAGATaGCTTCAGCTCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRNLRTR*LQLSRG
Trigger: TCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAGATT...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CCA 90 bp GCTGCAGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGGGAGCAACAGAACAATaGGAAAGAGGACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: AAGHVEKPNWEILQGVEKGATEQ*ERGLGE
Trigger: CTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCC...CTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR TCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTAGTAAGCTACACCTGTaGCTAAGACCCAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPSKLHL*LRPRPW
Trigger: CCAAGGCCTGGGTCTTAGTCACAGGTGTAGCTTACT...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS-3UTR GCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTATGGGTCAGGATTCCTaGCAGGTCCCCGATGTGTAT +
Preference number: 4 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPMGQDS*QVPDVY
Trigger: ATACACATCGGGGACCTGGCAGGAATCCTGACCCAT...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR GCA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATTTTATTGCCTAAACTaGAGAGCATTCTCTACACAG +
Preference number: 4 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRFYCLN*RAFSTQ
Trigger: CTGTGTAGAGAATGCTCTGCAGTTTAGGCAATAAAA...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538105.6
ENST00000553930.5
CDS-3UTR CCA 90 bp GAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCCGATTACCTCTTTTTaGAAGGTTTCATTCCATCTT +
Preference number: 4 (lower is better)
Translates to: EQWERGLGEESKNQMASAPITSF*KVSFHL
Trigger: AAGATGGAATGAAACCTTCCAAAAAGAGGTAATCGG...AGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS-3UTR CCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTACTCCGCAGTCAGACTaGGCTGGTAGTAAGCTACAC +
Preference number: 4 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPTPQSD*AGSKLH
Trigger: GTGTAGCTTACTACCAGCCCAGTCTGACTGCGGAGT...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS-3UTR TCA 90 bp AACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGCCTGTCCCGCCACCTaGTCGGAAAATACAAATTGT +
Preference number: 4 (lower is better)
Translates to: NQTGKSYKELKRLMSQPDACPAT*SENTNC
Trigger: ACAATTTGTATTTTCCGATCAGGTGGCGGGACAGGC...ATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR CCA 90 bp GCTGCAGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGCTTGAGACAATAAGGTaGAGCAACAGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: AAGHVEKPNWEILQGVEKLETIR*SNRTMG
Trigger: TCCCATTGTTCTGTTGCTCCACCTTATTGTCTCAAG...CTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR TCA 90 bp GCAGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTATGAGATTACGGCCTTaGGACAATAAGGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: AGHVEKPNWEILQGVEKIMRLRP*DNKVEQ
Trigger: TTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCAT...AATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR TCA 90 bp AACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATATGAGATTACGGCCTTaGGACAATAAGGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: NQTGKSYKELKRLMSQPDMRLRP*DNKVEQ
Trigger: TTGCTCCACCTTATTGTCTCAAGGCCGTAATCTCAT...ATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTCTGCAGCTTCCCATTTaGTTACGAGGTTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPLQLPI*LRGWRK
Trigger: TTTTCTCCAACCTCGTAACCAAATGGGAAGCTGCAG...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CCA 90 bp AGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTATTTGGTTACGAGGTTaGAGAAAAAGTCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RNQTGKSYKELKRLMSQPIWLRG*RKSQSP
Trigger: GGGACTTTGACTTTTTCTCCAACCTCGTAACCAAAT...AGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS CCA 90 bp CGCCCTGCGCCGCCCAACTCTGCCCTCCCACCCGCTTCCAGAGGATaGACTTACCCACGTGATCCGGCCGGGCCCGGGCTTTCGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RPAPPNSALPPASRG*TYPRDPAGPGLSGD
Trigger: GTCTCCCGAAAGCCCGGGCCCGGCCGGATCACGTGGGTAAGTCCATCCTCTGGAAGCGGGTGGGAGGGCAGAGTTGGGCGGCGCAGGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS GCA 90 bp CCGATGCAGCGAGCTCATCCTGTCGGAGAAAGCACACAGTGCCCCTaGCCCGCCCTGCGCCGCCCAACTCTGCCCTCCCACCCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: PMQRAHPVGESTQCP*PALRRPTLPSHPLP
Trigger: TGGAAGCGGGTGGGAGGGCAGAGTTGGGCGGCGCAGGGCGGGGCAGGGGCACTGTGTGCTTTCTCCGACAGGATGAGCTCGCTGCATCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS GCA 90 bp GAGCTCATCCTGTCGGAGAAAGCACACAGTGCCCCTGCCCCGCCCTaGGCCGCCCAACTCTGCCCTCCCACCCGCTTCCAGAGGATGGAC +
Preference number: 5 (lower is better)
Translates to: ELILSEKAHSAPAPP*AAQLCPPTRFQRMD
Trigger: GTCCATCCTCTGGAAGCGGGTGGGAGGGCAGAGTTGGGCGGCGCAGGGCGGGGCAGGGGCACTGTGTGCTTTCTCCGACAGGATGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS GCA 90 bp CTCTCCGGCCAGGTTGACGGCGGCATCGCAGCTCGGCAGCCCCGATaGAGCGAGCTCATCCTGTCGGAGAAAGCACACAGTGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: LSGQVDGGIAARQPR*SELILSEKAHSAPA
Trigger: GGCAGGGGCACTGTGTGCTTTCTCCGACAGGATGAGCTCGCTGCATCGGGGCTGCCGAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS GCA 90 bp TGGCCCTCCAGCAGCATGATGGCACGCTGTCGCCCAAAGACAGCTTaGACCACAGCGCTGGGGAGAGGGATGAAGGCTCGGCGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: WPSSSMMARCRPKTA*TTALGRGMKARRPR
Trigger: CCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555365.5
ENST00000555561.5
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS TCA 90 bp CAACTCTGCCCTCCCACCCGCTTCCAGAGGATGGACTTACCCACGTaGTCCGGCCGGGCCCGGGCTTTCGGGAGACCAACGTCACTTCGT +
Preference number: 5 (lower is better)
Translates to: QLCPPTRFQRMDLPT*SGRARAFGRPTSLR
Trigger: ACGAAGTGACGTTGGTCTCCCGAAAGCCCGGGCCCGGCCGGATCACGTGGGTAAGTCCATCCTCTGGAAGCGGGTGGGAGGGCAGAGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS CCA 90 bp GTGATCCGGCCGGGCCCGGGCTTTCGGGAGACCAACGTCACTTCGTaGCCTCTGGCATTCAGCAGCTGGGTTAGGGCTGTCCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: VIRPGPGFRETNVTS*PLAFSSWVRAVPMK
Trigger: CTTCATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGTCTCCCGAAAGCCCGGGCCCGGCCGGATCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553930.5
ENST00000553937.1
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555365.5
ENST00000555830.1
ENST00000556175.1
ENST00000556249.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS-3UTR CAA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCTCGCCCAAAGACAGCTaGCACCACAGCGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: QCLTWKPVRNRPQALATTSPKDS*HHSAGE
Trigger: CTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGA...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS TCA 90 bp TGGCCAGTGTTCGCTGTGGGATCACCTTCTGGCCCTCCAGCAGCATaGTGGCACGCTGTCGCCCAAAGACAGCTTGCACCACAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: WPVFAVGSPSGPPAA*WHAVAQRQLAPQRW
Trigger: CCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555365.5
ENST00000555561.5
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS GCA 90 bp GGCGGAGGATGGAGCCACTCCATTCAGGACCCCGTGCACGTGGTTTaGTTCAAGGGCATGGGTCAGGATTCCTGCCAGGTCCCCGATGTG +
Preference number: 5 (lower is better)
Translates to: GGGWSHSIQDPVHVV*FKGMGQDSCQVPDV
Trigger: CACATCGGGGACCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS GCA 90 bp AAGCCTGTCCCGCCACCTCAGACGCGACTACGACCTCTCTGCGCATaGCCCTTTCGGGAAGCGCGTTCCAATCGAGGTCGCAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: KPVPPPQTRLRPLCA*PFREARSNRGRNPV
Trigger: CACAGGATTGCGACCTCGATTGGAACGCGCTTCCCGAAAGGGGCATGCGCAGAGAGGTCGTAGTCGCGTCTGAGGTGGCGGGACAGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553937.1
ENST00000555830.1
CDS GCA 90 bp TCTCGGGCTAGGAGGCCAAGGCCAGGTTGCCTGTGCACTAGACAGTaGCCTCCCGGAAGCGGATTCCCAGTCCTCAATCTCCGACTAAGC +
Preference number: 5 (lower is better)
Translates to: SRARRPRPGCLCTRQ*PPGSGFPVLNLRLS
Trigger: GCTTAGTCGGAGATTGAGGACTGGGAATCCGCTTCCGGGAGGGCACTGTCTAGTGCACAGGCAACCTGGCCTTGGCCTCCTAGCCCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000544691.6
ENST00000554947.5
ENST00000556262.5
CDS GCA 90 bp GGAGATTCGGCTTCTCGGGCTAGGAGGCCAAGGCCAGGTTGCCTGTaGACTAGACAGTGCCCTCCCGGAAGCGGATTCCCAGTCCTCAAT +
Preference number: 5 (lower is better)
Translates to: GDSASRARRPRPGCL*TRQCPPGSGFPVLN
Trigger: ATTGAGGACTGGGAATCCGCTTCCGGGAGGGCACTGTCTAGTGCACAGGCAACCTGGCCTTGGCCTCCTAGCCCGAGAAGCCGAATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000544691.6
ENST00000554947.5
ENST00000556262.5
CDS GCA 90 bp CCAATGAAGCCTGTCCCGCCACCTCAGACGCGACTACGACCTCTCTaGGCATGCCCCTTTCGGGAAGCGCGTTCCAATCGAGGTCGCAAT +
Preference number: 5 (lower is better)
Translates to: PMKPVPPPQTRLRPL*ACPFREARSNRGRN
Trigger: ATTGCGACCTCGATTGGAACGCGCTTCCCGAAAGGGGCATGCGCAGAGAGGTCGTAGTCGCGTCTGAGGTGGCGGGACAGGCTTCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553937.1
ENST00000555830.1
CDS CCA 90 bp TTAGTGGCGGAGGATGGAGCCACTCCATTCAGGACCCCGTGCACGTaGTTTGCTTCAAGGGCATGGGTCAGGATTCCTGCCAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: LVAEDGATPFRTPCT*FASRAWVRIPARSP
Trigger: CGGGGACCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS-3UTR CAA 90 bp CAGTGCCTAACCTGGAAGCCTGTGAGGAACAGGCCTCAGGCCCTTGCCACGACCCATCTTCGGAGAGGGTaGAGGATGTTCTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: QCLTWKPVRNRPQALATTHLRRG*RMFSPA
Trigger: GGCCGGAGAGAACATCCTCAACCCTCTCCGAAGATG...GGTCGTGGCAAGGGCCTGAGGCCTGTTCCTCACAGGCTTCCAGGTTAGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS CCA 90 bp TTTCGGGAGACCAACGTCACTTCGTGGCCTCTGGCATTCAGCAGCTaGGTTAGGGCTGTCCCAATGAAGCCTGTCCCGCCACCCACAAGC +
Preference number: 5 (lower is better)
Translates to: FRETNVTSWPLAFSS*VRAVPMKPVPPPTS
Trigger: GCTTGTGGGTGGCGGGACAGGCTTCATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGTCTCCCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399395.8
ENST00000555365.5
ENST00000556548.5
CDS CCA 90 bp TTTCGGGAGACCAACGTCACTTCGTGGCCTCTGGCATTCAGCAGCTaGGTTAGGGCTGTCCCAATGAAGCCTGTCCCGCCACCTGATCGG +
Preference number: 5 (lower is better)
Translates to: FRETNVTSWPLAFSS*VRAVPMKPVPPPDR
Trigger: CCGATCAGGTGGCGGGACAGGCTTCATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGTCTCCCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000544691.6
ENST00000554698.5
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
CDS CCA 90 bp TTTCGGGAGACCAACGTCACTTCGTGGCCTCTGGCATTCAGCAGCTaGGTTAGGGCTGTCCCAATGAAGCCTGTCCCGCCACCTCAGACG +
Preference number: 5 (lower is better)
Translates to: FRETNVTSWPLAFSS*VRAVPMKPVPPPQT
Trigger: CGTCTGAGGTGGCGGGACAGGCTTCATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGTCTCCCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553937.1
ENST00000555830.1
CDS CCA 90 bp TTTCGGGAGACCAACGTCACTTCGTGGCCTCTGGCATTCAGCAGCTaGGTTAGGGCTGTCCCAATGAAGCCTGTCCCGCCACCTCACCTC +
Preference number: 5 (lower is better)
Translates to: FRETNVTSWPLAFSS*VRAVPMKPVPPPHL
Trigger: GAGGTGAGGTGGCGGGACAGGCTTCATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGTCTCCCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS GCA 90 bp TCAGCATTAGTGGCGGAGGATGGAGCCACTCCATTCAGGACCCCGTaGACGTGGTTTGCTTCAAGGGCATGGGTCAGGATTCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: SALVAEDGATPFRTP*TWFASRAWVRIPAR
Trigger: CCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAATGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS CCA 90 bp GGCAGCACCCAAGGTCTGGGCAAACTCAGCATTAGTGGCGGAGGATaGAGCCACTCCATTCAGGACCCCGTGCACGTGGTTTGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: GSTQGLGKLSISGGG*SHSIQDPVHVVCFK
Trigger: CTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAATGCTGAGTTTGCCCAGACCTTGGGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS CCA 90 bp CCTTTAAGGCAGCCCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTaGCCAGTGTTCGCTGTGGGATCACCTTCTGGCCCTCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PLRQPLALGRNTGSQ*PVFAVGSPSGPPAA
Trigger: TGCTGCTGGAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGGCTGCCTTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS CCA 90 bp CTGTCTGATACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTaGCGTGTAGAATCTCCAGGAAGCCTGGCTGCAGCTTCCCATTTG +
Preference number: 5 (lower is better)
Translates to: LSDTQARFSPERTTT*RVESPGSLAAASHL
Trigger: CAAATGGGAAGCTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGTATCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555355.5
CDS-3UTR CAA 90 bp GGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAAGCCTATATTCCCGTGGAGTaGGGGTGGGGGCGCCTTCCG +
Preference number: 5 (lower is better)
Translates to: GFSSLEELSLFTVPNLEAYIPVE*GWGRLP
Trigger: CGGAAGGCGCCCCCACCCCAACTCCACGGGAATATA...GGCTTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR CAA 90 bp GATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTAACCTGGAATCGCCCAAAGACAGCTaGCACCACAGCGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: DGFSSLEELSLFTVPNLESPKDS*HHSAGE
Trigger: CTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGA...TTCCAGGTTAGGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CAA 90 bp CTAAGAACCAGATGGCTTCAGCTCTCTAGAGGAGCTGAGCCTATTCACAGTGCCTCGCCCAAAGACAGCTaGCACCACAGCGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LRTRWLQLSRGAEPIHSASPKDS*HHSAGE
Trigger: CTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGA...GGCACTGTGAATAGGCTCAGCTCCTCTAGAGAGCTGAAGCCATCTGGTTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CAA 90 bp AACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCGCCCAAAGACAGCTaGCACCACAGCGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: NNGKEDWERNLRTRWLQLSPKDS*HHSAGE
Trigger: CTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGA...GAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CAA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGGGGGGTTGTGGGGCTTaGGTGATGGCTTTAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQGGCGA*VMALAS
Trigger: GCTGGCTAAAGCCATCACCAAAGCCCCACAACCCCC...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000553930.5
ENST00000555365.5
CDS-3UTR CAA 90 bp GCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTCCCCGTGCACGTGGTTaGCTTCAAGGGCATGGGTCA +
Preference number: 5 (lower is better)
Translates to: ATEQWERGLGEESKNQMAPRARG*LQGHGS
Trigger: TGACCCATGCCCTTGAAGCAAACCACGTGCACGGGG...AGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CAA 90 bp CAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCCCCGTGCACGTGGTTaGCTTCAAGGGCATGGGTCA +
Preference number: 5 (lower is better)
Translates to: QNNGKEDWERNLRTRWLQPRARG*LQGHGS
Trigger: TGACCCATGCCCTTGAAGCAAACCACGTGCACGGGG...CTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CAA 90 bp AACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCCCCCGTGCACGTGGTTaGCTTCAAGGGCATGGGTCA +
Preference number: 5 (lower is better)
Translates to: NNGKEDWERNLRTRWLQLPRARG*LQGHGS
Trigger: TGACCCATGCCCTTGAAGCAAACCACGTGCACGGGG...GAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CAA 90 bp TATTGCCTAAACTGCAGAGCATTCTCTACACAGCGTAAAGGAGAAGTGGGGCAGGACCTTCGGAGAGGGTaGAGGATGTTCTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: YCLNCRAFSTQRKGEVGQDLRRG*RMFSPA
Trigger: GGCCGGAGAGAACATCCTCAACCCTCTCCGAAGGTC...CTGCCCCACTTCTCCTTTACGCTGTGTAGAGAATGCTCTGCAGTTTAGGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554698.5
CDS-3UTR CAA 90 bp GCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCTCCCCATGCTGACTaGGCTCTGAGCGCACCACCA +
Preference number: 5 (lower is better)
Translates to: ATEQWERGLGEESKNQMASPHAD*ALSAPP
Trigger: TGGTGGTGCGCTCAGAGCCAAGTCAGCATGGGGAGA...AGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS-3UTR CAA 90 bp GCTGCAGGACATGTAGAGAAACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGTTCTCTCCGGCCAGGTaGACGGCGGCATCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: AAGHVEKPNWEILQGVEKFSPAR*TAASQL
Trigger: GAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGAA...CTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTTTCTCTACATGTCCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CAA 90 bp AACCAAACTGGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATTTCTCTCCGGCCAGGTaGACGGCGGCATCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: NQTGKSYKELKRLMSQPDFSPAR*TAASQL
Trigger: GAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGAA...ATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCCAGTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CAA 90 bp TCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGGCCTTGCCCCGTGCACGTGGTTaGCTTCAAGGGCATGGGTCA +
Preference number: 5 (lower is better)
Translates to: SYKELKRLMSQPDEITALPRARG*LQGHGS
Trigger: TGACCCATGCCCTTGAAGCAAACCACGTGCACGGGG...CAAGGCCGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS GCA 90 bp GAAGTGAGCAGTATGGCTGTCTTTAAGACCTCACACCTTCTCATCTaGAGGTTGGCTAGAAGTGGTGGCATCCTCTCACTCTGTAATTGT +
Preference number: 5 (lower is better)
Translates to: EVSSMAVFKTSHLLI*RLARSGGILSLCNC
Trigger: ACAATTACAGAGTGAGAGGATGCCACCACTTCTAGCCAACCTGCAGATGAGAAGGTGTGAGGTCTTAAAGACAGCCATACTGCTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555355.5
CDS-3UTR CAA 90 bp GGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGGGGGGTTGTGGGGCTTaGGTGATGGCTTTAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GKSYKELKRLMSQPDEITGGCGA*VMALAS
Trigger: GCTGGCTAAAGCCATCACCAAAGCCCCACAACCCCC...CGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS CCA 90 bp GCAGTATGGCTGTCTTTAAGACCTCACACCTTCTCATCTGCAGGTTaGCTAGAAGTGGTGGCATCCTCTCACTCTGTAATTGTAATCTCA +
Preference number: 5 (lower is better)
Translates to: AVWLSLRPHTFSSAG*LEVVASSHSVIVIS
Trigger: TGAGATTACAATTACAGAGTGAGAGGATGCCACCACTTCTAGCCAACCTGCAGATGAGAAGGTGTGAGGTCTTAAAGACAGCCATACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555355.5
CDS-3UTR CAA 90 bp GGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGATGGCTTCAGCTCTCTAGACATTTGGTTACGAGGTaGGAGAAAAAGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: GKEDWERNLRTRWLQLSRHLVTR*EKKSKS
Trigger: GGACTTTGACTTTTTCTCCAACCTCGTAACCAAATG...TCTAGAGAGCTGAAGCCATCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS-3UTR CAA 90 bp GTGGAGCAACAGAACAATGGGAAAGAGGACTGGGAGAGGAATCTAAGAACCAGACATTTGGTTACGAGGTaGGAGAAAAAGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: VEQQNNGKEDWERNLRTRHLVTR*EKKSKS
Trigger: GGACTTTGACTTTTTCTCCAACCTCGTAACCAAATG...TCTGGTTCTTAGATTCCTCTCCCAGTCCTCTTTCCCATTGTTCTGTTGCTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
CDS GCA 90 bp GGGTCTCAATTTCTTAGTGAAAGTACACAAAGGTTAGGAGAAACATaGATGGATCAAGGGCCTAGGAAGTCATTTTGCCTGGAAAAGACC +
Preference number: 5 (lower is better)
Translates to: GSQFLSESTQRLGET*MDQGPRKSFCLEKT
Trigger: GGTCTTTTCCAGGCAAAATGACTTCCTAGGCCCTTGATCCATGCATGTTTCTCCTAACCTTTGTGTACTTTCACTAAGAAATTGAGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555778.1
ENST00000556548.5
CDS-3UTR CAA 90 bp TCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGGCCTTGCATTTGGTTACGAGGTaGGAGAAAAAGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: SYKELKRLMSQPDEITALHLVTR*EKKSKS
Trigger: GGACTTTGACTTTTTCTCCAACCTCGTAACCAAATG...CAAGGCCGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS-3UTR CAA 90 bp GGGAAATCTTACAAGGAGTTGAAAAGATTAATGTCCCAACCTGATGAGATTACGCATTTGGTTACGAGGTaGGAGAAAAAGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: GKSYKELKRLMSQPDEITHLVTR*EKKSKS
Trigger: GGACTTTGACTTTTTCTCCAACCTCGTAACCAAATG...CGTAATCTCATCAGGTTGGGACATTAATCTTTTCAACTCCTTGTAAGATTTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538105.6
ENST00000553930.5
ENST00000554698.5
CDS TCA 90 bp ACCAGGCGCCTGAATTTTAATCAGCTCCCTCATTTATTAACTCTCTaGCTTGATGCAAGTTACTTAACCTCTCTGTATAGAATTTTCACA +
Preference number: 5 (lower is better)
Translates to: TRRLNFNQLPHLLTL*LDASYLTSLYRIFT
Trigger: TGTGAAAATTCTATACAGAGAGGTTAAGTAACTTGCATCAAGTCAGAGAGTTAATAAATGAGGGAGCTGATTAAAATTCAGGCGCCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556548.5
CDS GCA 72 bp CAGGTTGACGGCGGCATCGCAGCTCGGCAGCCCCGATaGAGCGAGCTCATCCCACGTGATCCGGCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: QVDGGIAARQPR*SELIPRDPAGP
Trigger: GGGCCCGGCCGGATCACGTGGGATGAGCTCGCTGCATCGGGGCTGCCGAGCTGCGATGCCGCCGTCAACCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553930.5
ENST00000554698.5
ENST00000555225.5
ENST00000555830.1
ENST00000556523.1
CDS GCA 72 bp CGAGCTCATCCTGTCGGAGAAAGCACACAGTGCCCCTaGCCCGCCCTGCGCCGCCCAACTCTGCCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: RAHPVGESTQCP*PALRRPTLPSH
Trigger: GTGGGAGGGCAGAGTTGGGCGGCGCAGGGCGGGGCAGGGGCACTGTGTGCTTTCTCCGACAGGATGAGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp CCGCCCAACTCTGCCCTCCCACCCGCTTCCAGAGGATaGACTTACCCACGTGATCCGGCCGGGCCCGGGCTT +
Preference number: 6 (lower is better)
Translates to: PPNSALPPASRG*TYPRDPAGPGL
Trigger: AAGCCCGGGCCCGGCCGGATCACGTGGGTAAGTCCATCCTCTGGAAGCGGGTGGGAGGGCAGAGTTGGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS TCA 72 bp CCTCCCACCCGCTTCCAGAGGATGGACTTACCCACGTaGTCCGGCCGGGCCCGGGCTTTCGGGAGACCAACG +
Preference number: 6 (lower is better)
Translates to: PPTRFQRMDLPT*SGRARAFGRPT
Trigger: CGTTGGTCTCCCGAAAGCCCGGGCCCGGCCGGATCACGTGGGTAAGTCCATCCTCTGGAAGCGGGTGGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS CAA 90 bp CGGGCTGACCTTCGGAGAGGGTTGAGGATGTTCTCTCCGGCCAGGTaGACGGCGGCATCGCAGCTCGGCAGCCCCGATGCAGCGAGCTCA +
Preference number: 6 (lower is better)
Translates to: RADLRRGLRMFSPAR*TAASQLGSPDAASS
Trigger: TGAGCTCGCTGCATCGGGGCTGCCGAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGAACATCCTCAACCCTCTCCGAAGGTCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553343.5
ENST00000554698.5
ENST00000556175.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS GCA 72 bp CCGCCACCTCAGACGCGACTACGACCTCTCTGCGCATaGCCCTTTCGGGAAGCGCGTTCCAATCGAGGTCGC +
Preference number: 6 (lower is better)
Translates to: PPPQTRLRPLCA*PFREARSNRGR
Trigger: GCGACCTCGATTGGAACGCGCTTCCCGAAAGGGGCATGCGCAGAGAGGTCGTAGTCGCGTCTGAGGTGGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553937.1
ENST00000555830.1
CDS CCA 72 bp CCGGGCCCGGGCTTTCGGGAGACCAACGTCACTTCGTaGCCTCTGGCATTCAGCAGCTGGGTTAGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: PGPGFRETNVTS*PLAFSSWVRAV
Trigger: GACAGCCCTAACCCAGCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGTCTCCCGAAAGCCCGGGCCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553930.5
ENST00000553937.1
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555365.5
ENST00000555830.1
ENST00000556175.1
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS CAA 72 bp CTTCGGAGAGGGTTGAGGATGTTCTCTCCGGCCAGGTaGACGGCGGCATCGCAGCTCGGCAGCCCCGATGCA +
Preference number: 6 (lower is better)
Translates to: LRRGLRMFSPAR*TAASQLGSPDA
Trigger: TGCATCGGGGCTGCCGAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGAACATCCTCAACCCTCTCCGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555778.1
ENST00000555830.1
ENST00000556175.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS GCA 72 bp GCTTCTCGGGCTAGGAGGCCAAGGCCAGGTTGCCTGTaGACTAGACAGTGCCCTCCCGGAAGCGGATTCCCA +
Preference number: 6 (lower is better)
Translates to: ASRARRPRPGCL*TRQCPPGSGFP
Trigger: TGGGAATCCGCTTCCGGGAGGGCACTGTCTAGTGCACAGGCAACCTGGCCTTGGCCTCCTAGCCCGAGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000544691.6
ENST00000554947.5
ENST00000556262.5
CDS GCA 72 bp CAGGTTGACGGCGGCATCGCAGCTCGGCAGCCCCGATaGAGCGAGCTCATCCTGTCGGAGAAAGCACACAGT +
Preference number: 6 (lower is better)
Translates to: QVDGGIAARQPR*SELILSEKAHS
Trigger: ACTGTGTGCTTTCTCCGACAGGATGAGCTCGCTGCATCGGGGCTGCCGAGCTGCGATGCCGCCGTCAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000554947.5
ENST00000555778.1
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS GCA 72 bp CCTGTCCCGCCACCTCAGACGCGACTACGACCTCTCTaGGCATGCCCCTTTCGGGAAGCGCGTTCCAATCGA +
Preference number: 6 (lower is better)
Translates to: PVPPPQTRLRPL*ACPFREARSNR
Trigger: TCGATTGGAACGCGCTTCCCGAAAGGGGCATGCGCAGAGAGGTCGTAGTCGCGTCTGAGGTGGCGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553937.1
ENST00000555830.1
CDS CAA 90 bp GGTAGTAAGCTTCGGAGAGGGTTGAGGATGTTCTCTCCGGCCAGGTaGACGGCGGCATCGCAGCTCGGCAGCCCCGATGCAGCGAGCTCA +
Preference number: 6 (lower is better)
Translates to: GSKLRRGLRMFSPAR*TAASQLGSPDAASS
Trigger: TGAGCTCGCTGCATCGGGGCTGCCGAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGAACATCCTCAACCCTCTCCGAAGCTTACTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538105.6
ENST00000555830.1
CDS CAA 90 bp TCATTCCATCTTCGGAGAGGGTTGAGGATGTTCTCTCCGGCCAGGTaGACGGCGGCATCGCAGCTCGGCAGCCCCGATGCAGCGAGCTCA +
Preference number: 6 (lower is better)
Translates to: SFHLRRGLRMFSPAR*TAASQLGSPDAASS
Trigger: TGAGCTCGCTGCATCGGGGCTGCCGAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGAACATCCTCAACCCTCTCCGAAGATGGAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399395.8
ENST00000544691.6
ENST00000553930.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555778.1
CDS CAA 90 bp CTAGTGGGTATCAGCTTTAGGGCCCGGGCTGACCTTCGGAGAGGGTaGAGGATGTTCTCTCCGGCCAGGTTGACGGCGGCATCGCAGCTC +
Preference number: 6 (lower is better)
Translates to: LVGISFRARADLRRG*RMFSPARLTAASQL
Trigger: GAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGAACATCCTCAACCCTCTCCGAAGGTCAGCCCGGGCCCTAAAGCTGATACCCACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553343.5
ENST00000554698.5
ENST00000556175.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp CTCCTGGGCTGTCTTCATCATACTCCGCAGTCAGACTaGGCTGGTAGTAAGCCACGTGATCCGGCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: LLGCLHHTPQSD*AGSKPRDPAGP
Trigger: GGGCCCGGCCGGATCACGTGGCTTACTACCAGCCCAGTCTGACTGCGGAGTATGATGAAGACAGCCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556249.1
CDS CCA 72 bp ACCCAGGCCCGTTTCTCACCTGAGCGCACCACCACCTaGCGTGTAGAATCTCCAGGAAGCCTGGCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: TQARFSPERTTT*RVESPGSLAAA
Trigger: AGCTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555355.5
CDS CAA 72 bp ATCAGCTTTAGGGCCCGGGCTGACCTTCGGAGAGGGTaGAGGATGTTCTCTCCGGCCAGGTTGACGGCGGCA +
Preference number: 6 (lower is better)
Translates to: ISFRARADLRRG*RMFSPARLTAA
Trigger: TGCCGCCGTCAACCTGGCCGGAGAGAACATCCTCAACCCTCTCCGAAGGTCAGCCCGGGCCCTAAAGCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553343.5
ENST00000554698.5
ENST00000556175.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS TCA 72 bp CTCTGGCATTCAGCAGCTGGGTTAGGGCTGTCCCAATaGAGCCTGTCCCGCCACCTCAGACGCGACTACGAC +
Preference number: 6 (lower is better)
Translates to: LWHSAAGLGLSQ*SLSRHLRRDYD
Trigger: GTCGTAGTCGCGTCTGAGGTGGCGGGACAGGCTTCATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553937.1
ENST00000555830.1
CDS TCA 72 bp CTCTGGCATTCAGCAGCTGGGTTAGGGCTGTCCCAATaGAGCCTGTCCCGCCACCTCACCTCAGACGCGACT +
Preference number: 6 (lower is better)
Translates to: LWHSAAGLGLSQ*SLSRHLTSDAT
Trigger: AGTCGCGTCTGAGGTGAGGTGGCGGGACAGGCTTCATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553930.5
CDS GCA 72 bp TGGAGCCACTCCATTCAGGACCCCGTGCACGTGGTTTaGTTCAAGGGCATGGGTCAGGATTCCTGCCAGGTC +
Preference number: 6 (lower is better)
Translates to: WSHSIQDPVHVV*FKGMGQDSCQV
Trigger: GACCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS GCA 72 bp GTGGCGGAGGATGGAGCCACTCCATTCAGGACCCCGTaGACGTGGTTTGCTTCAAGGGCATGGGTCAGGATT +
Preference number: 6 (lower is better)
Translates to: VAEDGATPFRTP*TWFASRAWVRI
Trigger: AATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp ACCAACGTCACTTCGTGGCCTCTGGCATTCAGCAGCTaGGTTAGGGCTGTCCCAATGAAGCCTGTCCCGCCA +
Preference number: 6 (lower is better)
Translates to: TNVTSWPLAFSS*VRAVPMKPVPP
Trigger: TGGCGGGACAGGCTTCATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAGAGGCCACGAAGTGACGTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000399395.8
ENST00000544691.6
ENST00000553930.5
ENST00000553937.1
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555365.5
ENST00000555830.1
ENST00000556175.1
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp GAGGATGGAGCCACTCCATTCAGGACCCCGTGCACGTaGTTTGCTTCAAGGGCATGGGTCAGGATTCCTGCC +
Preference number: 6 (lower is better)
Translates to: EDGATPFRTPCT*FASRAWVRIPA
Trigger: GGCAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp CAGCCCCTAGCTCTGGGAAGGAATACTGGTAGCCAGTaGCCAGTGTTCGCTGTGGGATCACCTTCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: QPLALGRNTGSQ*PVFAVGSPSGP
Trigger: AGGGCCAGAAGGTGATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
ENST00000555561.5
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp TTCAGGACCCCGTGCACGTGGTTTGCTTCAAGGGCATaGGTCAGGATTCCTGCCAGGTCCCCGATGTGTATC +
Preference number: 6 (lower is better)
Translates to: FRTPCTWFASRA*VRIPARSPMCI
Trigger: GATACACATCGGGGACCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp CAAGGTCTGGGCAAACTCAGCATTAGTGGCGGAGGATaGAGCCACTCCATTCAGGACCCCGTGCACGTGGTT +
Preference number: 6 (lower is better)
Translates to: QGLGKLSISGGG*SHSIQDPVHVV
Trigger: AACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAATGCTGAGTTTGCCCAGACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp GAAGGAATACTGGTAGCCAGTGGCCAGTGTTCGCTGTaGGATCACCTTCTGGCCCTCCAGCAGCATGATGGC +
Preference number: 6 (lower is better)
Translates to: EGILVASGQCSL*DHLLALQQHDG
Trigger: GCCATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000555365.5
ENST00000555561.5
ENST00000556262.5
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp CTCCGCAGTCAGACTGGGCTGGTAGTAAGCTGCCGGTaGAACACAATCATTTGCCCTGGGTGTCCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: LRSQTGLVVSCR*NTIICPGCPWS
Trigger: GGACCAAGGACACCCAGGGCAAATGATTGTGTTCCACCGGCAGCTTACTACCAGCCCAGTCTGACTGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553546.1
CDS TCA 72 bp TTCTCCCCACTTATCCCCCTCCTCGCGATGCAGAGGTaGCACAGGTCACAGGGATTAGGGAGATTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: FSPLIPLLAMQR*HRSQGLGRFGF
Trigger: GAAGCCGAATCTCCCTAATCCCTGTGACCTGTGTCACCTCTGCATCGCGAGGAGGGGGATAAGTGGGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000544691.6
ENST00000554698.5
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
CDS CCA 72 bp TGGGTGGTCTCTAGGCGGCTGCCGATTACCTCTTTTTaGAAGGTTTCATTCCATCCACGTGATCCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: WVVSRRLPITSF*KVSFHPRDPAG
Trigger: CCCGGCCGGATCACGTGGATGGAATGAAACCTTCCAAAAAGAGGTAATCGGCAGCCGCCTAGAGACCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555365.5
CDS GCA 72 bp CACGTGGTTTGCTTCAAGGGCATGGGTCAGGATTCCTaGCAGGTCCCCGATGTGTATCCAGGGGAAGAATTG +
Preference number: 6 (lower is better)
Translates to: HVVCFKGMGQDS*QVPDVYPGEEL
Trigger: CAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp CTCCTGGGCTGTCTTCATCATACTCCGCAGTCAGACTaGGCTGGTAGTAAGAGGTTCTCATCAGTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: LLGCLHHTPQSD*AGSKRFSSVGH
Trigger: GTGCCCCACTGATGAGAACCTCTTACTACCAGCCCAGTCTGACTGCGGAGTATGATGAAGACAGCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553343.5
CDS TCA 72 bp CTCTGGCATTCAGCAGCTGGGTTAGGGCTGTCCCAATaGAGCCTGTCCCGCCACCTGATCGGAAAATACAAA +
Preference number: 6 (lower is better)
Translates to: LWHSAAGLGLSQ*SLSRHLIGKYK
Trigger: TTTGTATTTTCCGATCAGGTGGCGGGACAGGCTTCATTGGGACAGCCCTAACCCAGCTGCTGAATGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000544691.6
ENST00000554698.5
ENST00000554947.5
ENST00000556175.1
ENST00000556262.5
CDS GCA 72 bp ATCATACTCCGCAGTCAGACTGGGCTGGTAGTAAGCTaGCGGTGGAACACAATCATTTGCCCTGGGTGTCCT +
Preference number: 6 (lower is better)
Translates to: IILRSQTGLVVS*RWNTIICPGCP
Trigger: AGGACACCCAGGGCAAATGATTGTGTTCCACCGGCAGCTTACTACCAGCCCAGTCTGACTGCGGAGTATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553546.1
CDS CCA 72 bp GGTTGTGGGGCTTTGGTGATGGCTTTAGCCAGCAATTaGGTGGTCTCTAGGCGGCTGCCGATTACCTCTTTT +
Preference number: 6 (lower is better)
Translates to: GCGALVMALASN*VVSRRLPITSF
Trigger: AAAAGAGGTAATCGGCAGCCGCCTAGAGACCACCCAATTGCTGGCTAAAGCCATCACCAAAGCCCCACAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399395.8
ENST00000544691.6
ENST00000553930.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555778.1
ENST00000556175.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
CDS CCA 72 bp CTCCTGGGCTGTCTTCATCATACTCCGCAGTCAGACTaGGCTGGTAGTAAGCTGCCGGTGGAACACAATCAT +
Preference number: 6 (lower is better)
Translates to: LLGCLHHTPQSD*AGSKLPVEHNH
Trigger: ATGATTGTGTTCCACCGGCAGCTTACTACCAGCCCAGTCTGACTGCGGAGTATGATGAAGACAGCCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553546.1
CDS CCA 72 bp CTCCTGGGCTGTCTTCATCATACTCCGCAGTCAGACTaGGCTGGTAGTAAGCTTCTCTGGCCCTTAGGATCT +
Preference number: 6 (lower is better)
Translates to: LLGCLHHTPQSD*AGSKLLWPLGS
Trigger: AGATCCTAAGGGCCAGAGAAGCTTACTACCAGCCCAGTCTGACTGCGGAGTATGATGAAGACAGCCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556548.5
CDS CAA 72 bp GGAAGCCTGGCTGCAGCTTCCCATTTGGTTACGAGGTaGGAGAAAAAGTCAAAGTCCCCTCCTGGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: GSLAAASHLVTR*EKKSKSPPGLS
Trigger: AGACAGCCCAGGAGGGGACTTTGACTTTTTCTCCAACCTCGTAACCAAATGGGAAGCTGCAGCCAGGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000555830.1
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS CCA 72 bp TGGGTGGTCTCTAGGCGGCTGCCGATTACCTCTTTTTaGAAGGTTTCATTCCATCTTCGGAGAGGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: WVVSRRLPITSF*KVSFHLRRGLR
Trigger: CCTCAACCCTCTCCGAAGATGGAATGAAACCTTCCAAAAAGAGGTAATCGGCAGCCGCCTAGAGACCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399395.8
ENST00000544691.6
ENST00000553930.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555778.1
CDS CCA 72 bp GAAGCCTGGCTGCAGCTTCCCATTTGGTTACGAGGTTaGAGAAAAAGTCAAAGTCCCCTCCTGGGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: EAWLQLPIWLRG*RKSQSPLLGCL
Trigger: AAGACAGCCCAGGAGGGGACTTTGACTTTTTCTCCAACCTCGTAACCAAATGGGAAGCTGCAGCCAGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000399395.8
ENST00000538105.6
ENST00000544691.6
ENST00000553343.5
ENST00000553546.1
ENST00000553930.5
ENST00000554698.5
ENST00000554947.5
ENST00000555225.5
ENST00000555355.5
ENST00000555365.5
ENST00000555561.5
ENST00000555830.1
ENST00000556249.1
ENST00000556262.5
ENST00000556523.1
ENST00000556548.5
ENST00000556707.5
CDS GCA 72 bp AGTATGGCTGTCTTTAAGACCTCACACCTTCTCATCTaGAGGTTGGCTAGAAGTGGTGGCATCCTCTCACTC +
Preference number: 6 (lower is better)
Translates to: SMAVFKTSHLLI*RLARSGGILSL
Trigger: GAGTGAGAGGATGCCACCACTTCTAGCCAACCTGCAGATGAGAAGGTGTGAGGTCTTAAAGACAGCCATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555355.5
CDS CCA 72 bp CTAGGAAGTCATTTTGCCTGGAAAAGACCAGTGCTCTaGTGTGTGCATAGCTACAGAGGTCTGAGTTACCCC +
Preference number: 6 (lower is better)
Translates to: LGSHFAWKRPVL*CVHSYRGLSYP
Trigger: GGGGTAACTCAGACCTCTGTAGCTATGCACACACCAGAGCACTGGTCTTTTCCAGGCAAAATGACTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555778.1
ENST00000556548.5
CDS CAA 90 bp AGCAGTATGGCTGTCTTTAAGACCTCACACCTTCTCATCTGCAGGTaGGCTAGAAGTGGTGGCATCCTCTCACTCTGTAATTGTAATCTC +
Preference number: 6 (lower is better)
Translates to: SSMAVFKTSHLLICR*ARSGGILSLCNCNL
Trigger: GAGATTACAATTACAGAGTGAGAGGATGCCACCACTTCTAGCCAACCTGCAGATGAGAAGGTGTGAGGTCTTAAAGACAGCCATACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555355.5
CDS GCA 72 bp TTTCTTAGTGAAAGTACACAAAGGTTAGGAGAAACATaGATGGATCAAGGGCCTAGGAAGTCATTTTGCCTG +
Preference number: 6 (lower is better)
Translates to: FLSESTQRLGET*MDQGPRKSFCL
Trigger: CAGGCAAAATGACTTCCTAGGCCCTTGATCCATGCATGTTTCTCCTAACCTTTGTGTACTTTCACTAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555778.1
ENST00000556548.5
CDS CAA 72 bp AAAACACTTCAAATAGTGGCTGGTGTGTATAATTGTTaGCAATTACTTGGTCCCAAAGGTGACCAGGAACTC +
Preference number: 6 (lower is better)
Translates to: KTLQIVAGVYNC*QLLGPKGDQEL
Trigger: GAGTTCCTGGTCACCTTTGGGACCAAGTAATTGCAAACAATTATACACACCAGCCACTATTTGAAGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555778.1
ENST00000556548.5