RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SDK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000069188

Ensembl transcript IDs: ENST00000392650.8, ENST00000410094.5, ENST00000424778.1, ENST00000479356.1, ENST00000585283.1

Found 989 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGCAGGGCCAGCAGCGCCTGTACACAGTGCACAGAGGGAGCCCTaGTCCACGAAGGGGCTCACGCTGAATCAGACAGGCCCCTGTGGG +
Preference number: 1 (lower is better)
Translates to: WAGPAAPVHSAQREP*STKGLTLNQTGPCG
Trigger: CCCACAGGGGCCTGTCTGATTCAGCGTGAGCCCCTTCGTGGAGCAGGGCTCCCTCTGTGCACTGTGTACAGGCGCTGCTGGCCCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR TCA 90 bp TGGGAAGCTGAGGGAAGCCCCTGCCCAGCCAGAGTGGCACTGTGGTaGGGCTCTGGCACCTTTAGAAGCACTGCCCAGGGAGGCGTGGGC +
Preference number: 1 (lower is better)
Translates to: WEAEGSPCPARVALW*GSGTFRSTAQGGVG
Trigger: GCCCACGCCTCCCTGGGCAGTGCTTCTAAAGGTGCCAGAGCCTCACCACAGTGCCACTCTGGCTGGGCAGGGGCTTCCCTCAGCTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp CTCTGGGTATTCCAGCCTCTGGACCAGGGACTTGGGCCACCCCTCTaGGCTCCTGTGCCTCTGTGCTTAGGAGGCTGCCGGGTGGCAGTG +
Preference number: 1 (lower is better)
Translates to: LWVFQPLDQGLGPPL*APVPLCLGGCRVAV
Trigger: CACTGCCACCCGGCAGCCTCCTAAGCACAGAGGCACAGGAGCCCAGAGGGGTGGCCCAAGTCCCTGGTCCAGAGGCTGGAATACCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp AGAAAGCTGTGCGGCACGATCACAGGCCGGCAGCTGCAGATGTGCTaGCATGGAGATGCCAGATGCTGCAGAGGGTGGGGGCGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: RKLCGTITGRQLQMC*HGDARCCRGWGRRW
Trigger: CCACCTCCGCCCCCACCCTCTGCAGCATCTGGCATCTCCATGGCAGCACATCTGCAGCTGCCGGCCTGTGATCGTGCCGCACAGCTTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp TGTGGTGAGGCTCTGGCACCTTTAGAAGCACTGCCCAGGGAGGCGTaGGCAGCAACAGAAGGCCTTGAGGCAGCGTGCACCAGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: CGEALAPLEALPREA*AATEGLEAACTRWG
Trigger: CCCCCACCTGGTGCACGCTGCCTCAAGGCCTTCTGTTGCTGCCCACGCCTCCCTGGGCAGTGCTTCTAAAGGTGCCAGAGCCTCACCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTaGATAGGGCCATACAGAGGCACTGGGGAGCGGGTGGCGGCTGCT +
Preference number: 1 (lower is better)
Translates to: RWWSGLPCAHAHGCP*IGPYRGTGERVAAA
Trigger: AGCAGCCGCCACCCGCTCCCCAGTGCCTCTGTATGGCCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp GGGGGCACCTGTGCTCAGGTGGTGGTCAGGATTGCCATGTGCGCATaGCCATGGGTGTCCCTGGATAGGGCCATACAGAGGCACTGGGGA +
Preference number: 1 (lower is better)
Translates to: GGTCAQVVVRIAMCA*PWVSLDRAIQRHWG
Trigger: TCCCCAGTGCCTCTGTATGGCCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCTGAGCACAGGTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp TCCCGAGGGGGCACCTGTGCTCAGGTGGTGGTCAGGATTGCCATGTaGGCATGCCCATGGGTGTCCCTGGATAGGGCCATACAGAGGCAC +
Preference number: 1 (lower is better)
Translates to: SRGGTCAQVVVRIAM*ACPWVSLDRAIQRH
Trigger: GTGCCTCTGTATGGCCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCTGAGCACAGGTGCCCCCTCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp TGCGCATGCCCATGGGTGTCCCTGGATAGGGCCATACAGAGGCACTaGGGAGCGGGTGGCGGCTGCTCAGATGGTCTCCCCTTTACCTTC +
Preference number: 1 (lower is better)
Translates to: CACPWVSLDRAIQRH*GAGGGCSDGLPFTF
Trigger: GAAGGTAAAGGGGAGACCATCTGAGCAGCCGCCACCCGCTCCCCAGTGCCTCTGTATGGCCCTATCCAGGGACACCCATGGGCATGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp AAAAGAAAGCTGTGCGGCACGATCACAGGCCGGCAGCTGCAGATGTaGTGCCATGGAGATGCCAGATGCTGCAGAGGGTGGGGGCGGAGG +
Preference number: 1 (lower is better)
Translates to: KRKLCGTITGRQLQM*CHGDARCCRGWGRR
Trigger: CCTCCGCCCCCACCCTCTGCAGCATCTGGCATCTCCATGGCAGCACATCTGCAGCTGCCGGCCTGTGATCGTGCCGCACAGCTTTCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp AGGCAATGCCAAAGGTGCCAGGTGTGTCCTGGTGTGAACCTGCTTTaGGTGGAGTCCCACAGGCAGGGGCCCTGGCATCACTGGCACGGA +
Preference number: 1 (lower is better)
Translates to: RQCQRCQVCPGVNLL*VESHRQGPWHHWHG
Trigger: TCCGTGCCAGTGATGCCAGGGCCCCTGCCTGTGGGACTCCACCCAAAGCAGGTTCACACCAGGACACACCTGGCACCTTTGGCATTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp ACCTGTGCTCAGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATaGGTGTCCCTGGATAGGGCCATACAGAGGCACTGGGGAGCGGGT +
Preference number: 1 (lower is better)
Translates to: TCAQVVVRIAMCACP*VSLDRAIQRHWGAG
Trigger: ACCCGCTCCCCAGTGCCTCTGTATGGCCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCTGAGCACAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp ACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGTaGACAGAGGGAGCCCTGCTCCACGAAGGGGCTCACGCTGAATCA +
Preference number: 1 (lower is better)
Translates to: TEHHLLGRASSACTQ*TEGALLHEGAHAES
Trigger: TGATTCAGCGTGAGCCCCTTCGTGGAGCAGGGCTCCCTCTGTGCACTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTaGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGGCTGTGCCAG +
Preference number: 1 (lower is better)
Translates to: PTLSTKGRAHHPFLM*PGFWEDGWEPRLCQ
Trigger: CTGGCACAGCCGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR TCA 90 bp TGGGCCCCAGACCCTGACTTCCCTTCCCGGTCACCATTAGCACAGTaGCTGACTTGGGGCTGTAGGAGAGTGGTCCAGGCTCTCTCTTAC +
Preference number: 1 (lower is better)
Translates to: WAPDPDFPSRSPLAQ*LTWGCRRVVQALSY
Trigger: GTAAGAGAGAGCCTGGACCACTCTCCTACAGCCCCAAGTCAGTCACTGTGCTAATGGTGACCGGGAAGGGAAGTCAGGGTCTGGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp GAGGAAAGAAAAGAAAGCTGTGCGGCACGATCACAGGCCGGCAGCTaGAGATGTGCTGCCATGGAGATGCCAGATGCTGCAGAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: EERKESCAARSQAGS*RCAAMEMPDAAEGG
Trigger: CCCACCCTCTGCAGCATCTGGCATCTCCATGGCAGCACATCTGCAGCTGCCGGCCTGTGATCGTGCCGCACAGCTTTCTTTTCTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR TCA 90 bp GAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTaGCTTCCCTTCCCGGTCACCATTAGCACAGTGACTGACTTGGGG +
Preference number: 1 (lower is better)
Translates to: EKLMAGCARSLGPRP*LPFPVTISTVTDLG
Trigger: CCCCAAGTCAGTCACTGTGCTAATGGTGACCGGGAAGGGAAGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp TCCCAGGCCTCCTTATTGGAGAAACCGCTTTTTGGACACTGGAGCTaGGCTGGCCTGTCTGCTGAGCCATCTTCCAGCATCTCCCCGTTC +
Preference number: 1 (lower is better)
Translates to: SQASLLEKPLFGHWS*AGLSAEPSSSISPF
Trigger: GAACGGGGAGATGCTGGAAGATGGCTCAGCAGACAGGCCAGCCCAGCTCCAGTGTCCAAAAAGCGGTTTCTCCAATAAGGAGGCCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp GTCAAGTGCTTCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTaGGCCCCAGACCCTGACTTCCCTTCCCGGTCACCATTAGCACAG +
Preference number: 1 (lower is better)
Translates to: VKCFRKNSWLGVPVL*APDPDFPSRSPLAQ
Trigger: CTGTGCTAATGGTGACCGGGAAGGGAAGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGAAGCACTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp GGCGGAGCCCAGCCTGGAAGCTGTTACTGGGGGTTAGGGTGTCTTTaGCTTTTTGCCTGTAAACTGGGTGCTAGGCTGACTGAGCAAACT +
Preference number: 1 (lower is better)
Translates to: GGAQPGSCYWGLGCL*LFACKLGARLTEQT
Trigger: AGTTTGCTCAGTCAGCCTAGCACCCAGTTTACAGGCAAAAAGGCAAAGACACCCTAACCCCCAGTAACAGCTTCCAGGCTGGGCTCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp CCTTGGCATGTTTCCCAAATCTCCTACTTGGGCTTCCTTGAACTCTaGTCACCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGC +
Preference number: 1 (lower is better)
Translates to: PWHVSQISYLGFLEL*SPTPTEHHLLGRAS
Trigger: GCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGGTGAGCAGAGTTCAAGGAAGCCCAAGTAGGAGATTTGGGAAACATGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp CATTCCCTCCCATCAGCTATTCTTGTCACTTGGTCCCATCTGACCTaGCCCTGCTGGGCGTGCAATTCAAATGCTGGGTCCACTTTGGAC +
Preference number: 1 (lower is better)
Translates to: HSLPSAILVTWSHLT*PCWACNSNAGSTLD
Trigger: GTCCAAAGTGGACCCAGCATTTGAATTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCAAGTGACAAGAATAGCTGATGGGAGGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp TTCTCCTTTGGGGAAGATTGTGCTTCCCTTCCCAGGCCTCCTTATTaGAGAAACCGCTTTTTGGACACTGGAGCTGGGCTGGCCTGTCTG +
Preference number: 1 (lower is better)
Translates to: FSFGEDCASLPRPPY*RNRFLDTGAGLACL
Trigger: CAGACAGGCCAGCCCAGCTCCAGTGTCCAAAAAGCGGTTTCTCCAATAAGGAGGCCTGGGAAGGGAAGCACAATCTTCCCCAAAGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp GCCTGGGTTTGCAAACTCTCTGGAGCCCTAGGAGGATGGTGGTTCTaGAGCCCAGAGCATCTTTTTGGTTTGTCTTGGCAGTGTGGGTGT +
Preference number: 1 (lower is better)
Translates to: AWVCKLSGALGGWWF*SPEHLFGLSWQCGC
Trigger: ACACCCACACTGCCAAGACAAACCAAAAAGATGCTCTGGGCTCCAGAACCACCATCCTCCTAGGGCTCCAGAGAGTTTGCAAACCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp ATTCCCAAGGGAGCAGTGAACCCCACCATCTCAAAGCTGAAGAGCTaGTGGCCACACACATCCTCTCACGGTTTTCTCCCTCCTTCTGAA +
Preference number: 1 (lower is better)
Translates to: IPKGAVNPTISKLKS*WPHTSSHGFLPPSE
Trigger: TTCAGAAGGAGGGAGAAAACCGTGAGAGGATGTGTGTGGCCAGCAGCTCTTCAGCTTTGAGATGGTGGGGTTCACTGCTCCCTTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR TCA 90 bp AAAAGCATTCCCTCCCATCAGCTATTCTTGTCACTTGGTCCCATCTaGCCTGCCCCTGCTGGGCGTGCAATTCAAATGCTGGGTCCACTT +
Preference number: 1 (lower is better)
Translates to: KSIPSHQLFLSLGPI*PAPAGRAIQMLGPL
Trigger: AAGTGGACCCAGCATTTGAATTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCAAGTGACAAGAATAGCTGATGGGAGGGAATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp CCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATaGTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTCAGTTG +
Preference number: 1 (lower is better)
Translates to: PYLHLCSPDFTFPCP*SGKSIPAQGGRGQL
Trigger: CAACTGACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp GTCCAGGCTCTCTCTTACCTTGGCATGTTTCCCAAATCTCCTACTTaGGCTTCCTTGAACTCTGCTCACCCACCCCAACAGAGCATCATC +
Preference number: 1 (lower is better)
Translates to: VQALSYLGMFPKSPT*ASLNSAHPPQQSII
Trigger: GATGATGCTCTGTTGGGGTGGGTGAGCAGAGTTCAAGGAAGCCCAAGTAGGAGATTTGGGAAACATGCCAAGGTAAGAGAGAGCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR TCA 90 bp TCTCTTACCTTGGCATGTTTCCCAAATCTCCTACTTGGGCTTCCTTaGACTCTGCTCACCCACCCCAACAGAGCATCATCTCTTGGGCAG +
Preference number: 1 (lower is better)
Translates to: SLTLACFPNLLLGLP*TLLTHPNRASSLGQ
Trigger: CTGCCCAAGAGATGATGCTCTGTTGGGGTGGGTGAGCAGAGTTCAAGGAAGCCCAAGTAGGAGATTTGGGAAACATGCCAAGGTAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp CATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTaGCAAGGCCAGTCGCCTTATTTACACCTCTGCTCCCCAGACTTC +
Preference number: 1 (lower is better)
Translates to: HSYLAHNALNLIIPQ*QGQSPYLHLCSPDF
Trigger: GAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACTGGCCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 90 bp GGGAAGATCCTGGCCACTGGATGTGGCTTTTTGCAGAACACTCCTTaGAGCAGATTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: GKILATGCGFLQNTP*SRLCMCMCVCVCVC
Trigger: ACACACACACACACACACACACATACACATACACAATCTGCTCCAAGGAGTGTTCTGCAAAAAGCCACATCCAGTGGCCAGGATCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 90 bp ATGAGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTaGATGGGAGATGTGTGTGTGTGTGTGTGTGTGGTGAGGATCTAT +
Preference number: 1 (lower is better)
Translates to: MSLFWRGSLDPVPCK*MGDVCVCVCVVRIY
Trigger: ATAGATCCTCACCACACACACACACACACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTTTTCTCCCTCCTTCTaGACGCCGGCTTTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLFSPSF*TPALLA
Trigger: GGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAA...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR CAA 90 bp GGGGGTGGTCCCGAGGGGGCACCTGTGCTCAGGTGGTGGTCAGGATaGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCCATAC +
Preference number: 2 (lower is better)
Translates to: GGGPEGAPVLRWWSG*PCAHAHGCPWIGPY
Trigger: GTATGGCCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCTGAGCACAGGTGCCCCCTCGGGACCACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCCCCCTGTGGGCCATCTaGCACCCATCTCAGCGGTGG +
Preference number: 2 (lower is better)
Translates to: TPQVQATQATCASQGRDGPLWAI*HPSQRW
Trigger: CCACCGCTGAGATGGGTGGCAGATGGCCCACAGGGG...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCCGAAGGGGCTCACGCTaGATCAGACAGGCCCCTGTG +
Preference number: 2 (lower is better)
Translates to: TPQVQATQATCASQGRDGRRGSR*IRQAPV
Trigger: CACAGGGGCCTGTCTGATTCAGCGTGAGCCCCTTCG...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCAAGCTGAAGAGCTGCTaGCCACACACATCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLKLKSC*PHTSSH
Trigger: GTGAGAGGATGTGTGTGGCCAGCAGCTCTTCAGCTT...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTCGGCCACGCCTGCCTaGCGGCCTCCAGTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGSATPA*RPPVLS
Trigger: GCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGGGGAAAGCCCTGGTGTaGCCAGCATGGGCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGGKALV*PAWAPG
Trigger: CCCAGGAGCCCATGCTGGGCACACCAGGGCTTTCCC...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGTCACTTGGTCCCATCTaGCCTGCCCCTGCTGGGCGT +
Preference number: 2 (lower is better)
Translates to: PPPLSNVARFLGGRLGASSLGPI*PAPAGR
Trigger: ACGCCCAGCAGGGGCAGGTCAGATGGGACCAAGTGA...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTCTGAACGCCGGCTTTaGTGGCCCTGGAATCTCTGG +
Preference number: 2 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGSERRL*WPWNLW
Trigger: CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCTGTGCTTAGGAGGCTaGCGGGTGGCAGTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGLCLGG*RVAVRG
Trigger: CCCTCTCACTGCCACCCGGCAGCCTCCTAAGCACAG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCGGGGCTGTAGGAGAGTaGTCCAGGCTCTCTCTTACC +
Preference number: 2 (lower is better)
Translates to: TPQVQATQATCASQGRDGGAVGE*SRLSLT
Trigger: GGTAAGAGAGAGCCTGGACCACTCTCCTACAGCCCC...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 90 bp GGCTTCCTTGAACTCTGCTCACCCACCCCAACAGAGCATCATCTCTaGGGCAGGGCCAGCAGCGCCTGTACACAGTGCACAGAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: GFLELCSPTPTEHHL*GRASSACTQCTEGA
Trigger: GGCTCCCTCTGTGCACTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGGTGAGCAGAGTTCAAGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGGCTGCCGGGTGGCAGTaGGAGGGACACAGATCTGAA +
Preference number: 2 (lower is better)
Translates to: PPPLSNVARFLGGRLGASAAGWQ*EGHRSE
Trigger: TTCAGATCTGTGTCCCTCTCACTGCCACCCGGCAGC...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTCCCCTTTACCTTCCTaGCCACCAGCCCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGSPLPS*PPAPHP
Trigger: TGGGTGAGGGGCTGGTGGGCAGGAAGGTAAAGGGGA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATTTCCCAAGGGAGCAGTaGACCCCACCATCTCAAAGC +
Preference number: 2 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHFPREQ*TPPSQS
Trigger: GCTTTGAGATGGTGGGGTTCACTGCTCCCTTGGGAA...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR-3UTR TCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTGGCAGGGGGTCTGGATaGGGCTGTCCGATGCCTGCC +
Preference number: 2 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGGRGSG*GCPMPA
Trigger: GGCAGGCATCGGACAGCCTCATCCAGACCCCCTGCC...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGAAGGAGGAGTTTGGTaGCATTTCTCTTTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLEGGVW*HFSFCF
Trigger: AAAGCAGAAAGAGAAATGGCACCAAACTCCTCCTTC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR-3UTR GCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGTCTGAACGCCGGCTTTaGTGGCCCTGGAATCTCTGG +
Preference number: 2 (lower is better)
Translates to: DEAVRCLPATVMVHGGKESERRL*WPWNLW
Trigger: CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGA...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR-3UTR GCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCAAGAAAAGAAAGCTGTaGGGCACGATCACAGGCCGG +
Preference number: 2 (lower is better)
Translates to: TPQVQATQATCASQGRDGKKRKL*GTITGR
Trigger: CCGGCCTGTGATCGTGCCGCACAGCTTTCTTTTCTT...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCTGGAAGGGGGCAGCTaGCTGGACATCCAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: DEAVRCLPATVMVHGGKELEGGS*LDIQKL
Trigger: AAGCTTCTGGATGTCCAGCCAGCTGCCCCCTTCCAG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR-3UTR CCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGGAGCACCTTACTTCCTaGAGGGGCAGAACCTCAGCC +
Preference number: 2 (lower is better)
Translates to: PPPLSNVARFLGGRLGASEHLTS*RGRTSA
Trigger: GGCTGAGGTTCTGCCCCTCCAGGAAGTAAGGTGCTC...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGAACTGGGTGCTAGGCTaGCTGAGCAAACTCTGGGTA +
Preference number: 2 (lower is better)
Translates to: PTPTEHHLLGRASSACTQNWVLG*LSKLWV
Trigger: TACCCAGAGTTTGCTCAGTCAGCCTAGCACCCAGTT...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCTTTGGGGAAGATTGTaGTTCCCTTCCCAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGLWGRL*FPSQAS
Trigger: GGAGGCCTGGGAAGGGAAGCACAATCTTCCCCAAAG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGGAACGCCGGCTTTGCTaGCCCTGGAATCTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: PPPLSNVARFLGGRLGASERRLC*PWNLWK
Trigger: TTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTC...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGTGTGTGTGTGTGTGGTaGGGATCTATCCAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: PTPTEHHLLGRASSACTQCVCVW*GSIQWR
Trigger: TCTCCACTGGATAGATCCTCACCACACACACACACA...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCCCTGTTCCTTGTAAGTaGATGGGAGATGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: TPQVQATQATCASQGRDGPVPCK*MGDVCV
Trigger: CACACACACATCTCCCATGCACTTACAAGGAACAGG...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTTGGTCCCATCTGACCTaGCCCTGCTGGGCGTGCAAT +
Preference number: 2 (lower is better)
Translates to: GIRKYQVDGKILATGCGFWSHLT*PCWACN
Trigger: ATTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCA...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTTTCCCAAGGGAGCAGTaGACCCCACCATCTCAAAGC +
Preference number: 2 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGFPREQ*TPPSQS
Trigger: GCTTTGAGATGGTGGGGTTCACTGCTCCCTTGGGAA...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGCCCTTGGTTCTCCTTTaGGGAAGATTGTGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: PPPLSNVARFLGGRLGASPLVLL*GRLCFP
Trigger: AGGGAAGCACAATCTTCCCCAAAGGAGAACCAAGGG...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTCTGGAAGGGGGCAGCTaGCTGGACATCCAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGLEGGS*LDIQKL
Trigger: AAGCTTCTGGATGTCCAGCCAGCTGCCCCCTTCCAG...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGGGTCCTGGAGGGGCTaGAAGGGGGCAGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPGSWRG*KGAAGW
Trigger: CCAGCCAGCTGCCCCCTTCCAGCCCCTCCAGGACCC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTCCTGGAAGCTGTTACTaGGGGTTAGGGTGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTPGSCY*GLGCLC
Trigger: GCAAAGACACCCTAACCCCCAGTAACAGCTTCCAGG...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTTGGACGGGAAGATCCTaGCCACTGGATGTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTWTGRS*PLDVAF
Trigger: AAAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCA...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTTCAGGAAAAACTCATaGCTGGGTGTGCCCGTTCTT +
Preference number: 2 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGFRKNS*LGVPVL
Trigger: AAGAACGGGCACACCCAGCCATGAGTTTTTCCTGAA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 90 bp CCAGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTaGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PVALFTPLLPRLHLS*SMLRKVNSSTGRQG
Trigger: CCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 90 bp GTTCTCCTTTGGGGAAGATTGTGCTTCCCTTCCCAGGCCTCCTTATaGGAGAAACCGCTTTTTGGACACTGGAGCTGGGCTGGCCTGTCT +
Preference number: 2 (lower is better)
Translates to: VLLWGRLCFPSQASL*EKPLFGHWSWAGLS
Trigger: AGACAGGCCAGCCCAGCTCCAGTGTCCAAAAAGCGGTTTCTCCAATAAGGAGGCCTGGGAAGGGAAGCACAATCTTCCCCAAAGGAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 90 bp CACCTTACTTCCTGGAGGGGCAGAACCTCAGCCCTTGGTTCTCCTTaGGGGAAGATTGTGCTTCCCTTCCCAGGCCTCCTTATTGGAGAA +
Preference number: 2 (lower is better)
Translates to: HLTSWRGRTSALGSP*GKIVLPFPGLLIGE
Trigger: TTCTCCAATAAGGAGGCCTGGGAAGGGAAGCACAATCTTCCCCAAAGGAGAACCAAGGGCTGAGGTTCTGCCCCTCCAGGAAGTAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGCCTTATTTACACCTCTaGTCCCCAGACTTCACCTTT +
Preference number: 2 (lower is better)
Translates to: PPPLSNVARFLGGRLGASPYLHL*SPDFTF
Trigger: AAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGG...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGGTGAAGGAGGAGTTTaGTGCCATTTCTCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWGEGGV*CHFSFC
Trigger: GCAGAAAGAGAAATGGCACCAAACTCCTCCTTCACC...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR-3UTR CCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATACAGGGCAGGGGGTCTaGATGAGGCTGTCCGATGCC +
Preference number: 2 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDTGQGV*MRLSDA
Trigger: GGCATCGGACAGCCTCATCCAGACCCCCTGCCCTGT...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTTCTGGACCAGGGACTTaGGCCACCCCTCTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLSGPGT*ATPLGS
Trigger: GGAGCCCAGAGGGGTGGCCCAAGTCCCTGGTCCAGA...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCTATCCAGTGGAGAGTaGCGTGTCTGCCCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCLSSGE*RVCPEG
Trigger: TCCCTCTGGGCAGACACGTCACTCTCCACTGGATAG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCTGGCCCTGGAATCTCTaGAAAAATAAACTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLWPWNL*KNKLRR
Trigger: CCTCCTGAGTTTATTTTTCCAGAGATTCCAGGGCCA...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR CAA 90 bp GGTCCAGGCTCTCTCTTACCTTGGCATGTTTCCCAAATCTCCTACTaGGGCTTCCTTGAACTCTGCTCACCCACCCCAACAGAGCATCAT +
Preference number: 2 (lower is better)
Translates to: GPGSLLPWHVSQISY*GFLELCSPTPTEHH
Trigger: ATGATGCTCTGTTGGGGTGGGTGAGCAGAGTTCAAGGAAGCCCAAGTAGGAGATTTGGGAAACATGCCAAGGTAAGAGAGAGCCTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCCACCATCTCAAAGCTaGAGAGCTGCTGGCCACACA +
Preference number: 2 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCPPSQS*RAAGHT
Trigger: TGTGTGGCCAGCAGCTCTTCAGCTTTGAGATGGTGG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 90 bp TGTGTGTGTGTAAAAGCATTCCCTCCCATCAGCTATTCTTGTCACTaGGTCCCATCTGACCTGCCCCTGCTGGGCGTGCAATTCAAATGC +
Preference number: 2 (lower is better)
Translates to: CVCVKAFPPISYSCH*VPSDLPLLGVQFKC
Trigger: GCATTTGAATTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCAAGTGACAAGAATAGCTGATGGGAGGGAATGCTTTTACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 90 bp CTCTCTTACCTTGGCATGTTTCCCAAATCTCCTACTTGGGCTTCCTaGAACTCTGCTCACCCACCCCAACAGAGCATCATCTCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LSYLGMFPKSPTWAS*NSAHPPQQSIISWA
Trigger: TGCCCAAGAGATGATGCTCTGTTGGGGTGGGTGAGCAGAGTTCAAGGAAGCCCAAGTAGGAGATTTGGGAAACATGCCAAGGTAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTTTTTCTCCCTCCTTCTaGACGCCGGCTTTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLFSPSF*TPALLA
Trigger: GGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAA...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATTCCCTCGGCCACGCCTaGCTGGCGGCCTCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNSLGHA*LAASSP
Trigger: AGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGA...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTACCTTTCCTTGTCCATaGTCAGGAAAGTCAATTCCA +
Preference number: 2 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTTFPCP*SGKSIP
Trigger: TGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTCGGCAGCTGCAGATGTaGTGCCATGGAGATGCCAGA +
Preference number: 2 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLRQLQM*CHGDAR
Trigger: TCTGGCATCTCCATGGCAGCACATCTGCAGCTGCCG...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCTTCCTTGTAAGTGCATaGGAGATGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: FSLNPGIRKYQVDGKILAFLVSA*EMCVCV
Trigger: CACACACACACACATCTCCCATGCACTTACAAGGAA...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 90 bp CGGGAAGATCCTGGCCACTGGATGTGGCTTTTTGCAGAACACTCCTaGGAGCAGATTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: REDPGHWMWLFAEHS*EQIVYVYVCVCVCV
Trigger: CACACACACACACACACACACATACACATACACAATCTGCTCCAAGGAGTGTTCTGCAAAAAGCCACATCCAGTGGCCAGGATCTTCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCAATAAACTCAGGAGGTaGAAAGTTGACTTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLNKLRR*KVDLVS
Trigger: AGAAACCAAGTCAACTTTTCACCTCCTGAGTTTATT...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR-3UTR GCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGCGTGGCCTCCGGGATaGCCATTCTTTTTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPAWPPG*PFFLQR
Trigger: TCTCTGCAAAAAGAATGGGCATCCCGGAGGCCACGC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGGTTGAGCAGGGGAGATaGGCAGTAGAGGTTGCCAAG +
Preference number: 2 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRVEQGR*AVEVAK
Trigger: CTTGGCAACCTCTACTGCCCATCTCCCCTGCTCAAC...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR GCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATAGAAGGAGGAGTTTGGTaGCATTTCTCTTTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIEGGVW*HFSFCF
Trigger: AAAGCAGAAAGAGAAATGGCACCAAACTCCTCCTTC...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGAGGCGGAGCCCAGCCTaGAAGCTGTTACTGGGGGTT +
Preference number: 2 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQRRSPA*KLLLGV
Trigger: AACCCCCAGTAACAGCTTCCAGGCTGGGCTCCGCCT...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGGGTGAAGGAGGAGTTTaGTGCCATTTCTCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRGEGGV*CHFSFC
Trigger: GCAGAAAGAGAAATGGCACCAAACTCCTCCTTCACC...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTTGGCCCTGGAATCTCTaGAAAAATAAACTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLWPWNL*KNKLRR
Trigger: CCTCCTGAGTTTATTTTTCCAGAGATTCCAGGGCCA...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGCGGCTTTGCTGGCCCTaGAATCTCTGGAAAAATAAA +
Preference number: 2 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRRLCWP*NLWKNK
Trigger: TTTATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCG...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGTCCGTAAGTACCAAGTaGACGGGAAGATCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQSVSTK*TGRSWP
Trigger: TGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGA...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGTTGCAGAACACTCCTTaGAGCAGATTGTGTATGTGT +
Preference number: 2 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQLQNTP*SRLCMC
Trigger: ACACATACACAATCTGCTCCAAGGAGTGTTCTGCAA...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR TCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGAATAAACTCAGGAGGTaGAAAGTTGACTTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQNKLRR*KVDLVS
Trigger: AGAAACCAAGTCAACTTTTCACCTCCTGAGTTTATT...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp GAGGCGTGGGCAGCAACAGAAGGCCTTGAGGCAGCGTaGACCAGGTGGGGGCAGCCCCCGCTGTGTCCTTGT +
Preference number: 3 (lower is better)
Translates to: EAWAATEGLEAA*TRWGQPPLCPC
Trigger: ACAAGGACACAGCGGGGGCTGCCCCCACCTGGTGCACGCTGCCTCAAGGCCTTCTGTTGCTGCCCACGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp CCATGGGTGTCCCTGGATAGGGCCATACAGAGGCACTaGGGAGCGGGTGGCGGCTGCTCAGATGGTCTCCCC +
Preference number: 3 (lower is better)
Translates to: PWVSLDRAIQRH*GAGGGCSDGLP
Trigger: GGGGAGACCATCTGAGCAGCCGCCACCCGCTCCCCAGTGCCTCTGTATGGCCCTATCCAGGGACACCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp GGGGGTGGTCCCGAGGGGGCACCTGTGCTCAGGTGGTaGTCAGGATTGCCATGTGCGCATGCCCATGGGTGT +
Preference number: 3 (lower is better)
Translates to: GGGPEGAPVLRW*SGLPCAHAHGC
Trigger: ACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCTGAGCACAGGTGCCCCCTCGGGACCACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp CATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGTaGACAGAGGGAGCCCTGCTCCACGAAGGGGCTCAC +
Preference number: 3 (lower is better)
Translates to: HLLGRASSACTQ*TEGALLHEGAH
Trigger: GTGAGCCCCTTCGTGGAGCAGGGCTCCCTCTGTGCACTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp TGCGGCACGATCACAGGCCGGCAGCTGCAGATGTGCTaGCATGGAGATGCCAGATGCTGCAGAGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: CGTITGRQLQMC*HGDARCCRGWG
Trigger: CCCCCACCCTCTGCAGCATCTGGCATCTCCATGGCAGCACATCTGCAGCTGCCGGCCTGTGATCGTGCCGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp CCAGCAGCGCCTGTACACAGTGCACAGAGGGAGCCCTaGTCCACGAAGGGGCTCACGCTGAATCAGACAGGC +
Preference number: 3 (lower is better)
Translates to: PAAPVHSAQREP*STKGLTLNQTG
Trigger: GCCTGTCTGATTCAGCGTGAGCCCCTTCGTGGAGCAGGGCTCCCTCTGTGCACTGTGTACAGGCGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp CTGTGCGGCACGATCACAGGCCGGCAGCTGCAGATGTaGTGCCATGGAGATGCCAGATGCTGCAGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: LCGTITGRQLQM*CHGDARCCRGW
Trigger: CCACCCTCTGCAGCATCTGGCATCTCCATGGCAGCACATCTGCAGCTGCCGGCCTGTGATCGTGCCGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp GCTCTGGCACCTTTAGAAGCACTGCCCAGGGAGGCGTaGGCAGCAACAGAAGGCCTTGAGGCAGCGTGCACC +
Preference number: 3 (lower is better)
Translates to: ALAPLEALPREA*AATEGLEAACT
Trigger: GGTGCACGCTGCCTCAAGGCCTTCTGTTGCTGCCCACGCCTCCCTGGGCAGTGCTTCTAAAGGTGCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp CAAGACAGGGCAGGGGGTCTGGATGAGGCTGTCCGATaGCTGCCAGCCACAGTGATGGTGCATGGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: QDRAGGLDEAVR*LPATVMVHGGK
Trigger: CTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGCCCTGTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR CCA 72 bp ATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTaGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: IQKLFLPSATPA*RPPVLSLRSLS
Trigger: AGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR CCA 72 bp TCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTaGATAGGGCCATACAGAGGCACTGGGGAGCGGGTG +
Preference number: 3 (lower is better)
Translates to: SGLPCAHAHGCP*IGPYRGTGERV
Trigger: CACCCGCTCCCCAGTGCCTCTGTATGGCCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp TCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTaGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGG +
Preference number: 3 (lower is better)
Translates to: STKGRAHHPFLM*PGFWEDGWEPR
Trigger: CCGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp CAGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATaGGTGTCCCTGGATAGGGCCATACAGAGGCACTGG +
Preference number: 3 (lower is better)
Translates to: QVVVRIAMCACP*VSLDRAIQRHW
Trigger: CCAGTGCCTCTGTATGGCCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR TCA 72 bp ATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTaGCTTCCCTTCCCGGTCACCATTAGCACAGTGACT +
Preference number: 3 (lower is better)
Translates to: MAGCARSLGPRP*LPFPVTISTVT
Trigger: AGTCACTGTGCTAATGGTGACCGGGAAGGGAAGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp TGTGCTCAGGTGGTGGTCAGGATTGCCATGTGCGCATaGCCATGGGTGTCCCTGGATAGGGCCATACAGAGG +
Preference number: 3 (lower is better)
Translates to: CAQVVVRIAMCA*PWVSLDRAIQR
Trigger: CCTCTGTATGGCCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCTGAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR TCA 72 bp GACCCTGACTTCCCTTCCCGGTCACCATTAGCACAGTaGCTGACTTGGGGCTGTAGGAGAGTGGTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: DPDFPSRSPLAQ*LTWGCRRVVQA
Trigger: AGCCTGGACCACTCTCCTACAGCCCCAAGTCAGTCACTGTGCTAATGGTGACCGGGAAGGGAAGTCAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp CCATCTGACCTGCCCCTGCTGGGCGTGCAATTCAAATaGTGGGTCCACTTTGGACTGAGCTTCCTGACCTGC +
Preference number: 3 (lower is better)
Translates to: PSDLPLLGVQFK*WVHFGLSFLTC
Trigger: GCAGGTCAGGAAGCTCAGTCCAAAGTGGACCCAGCATTTGAATTGCACGCCCAGCAGGGGCAGGTCAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp AAAGAAAGCTGTGCGGCACGATCACAGGCCGGCAGCTaGAGATGTGCTGCCATGGAGATGCCAGATGCTGCA +
Preference number: 3 (lower is better)
Translates to: KESCAARSQAGS*RCAAMEMPDAA
Trigger: TGCAGCATCTGGCATCTCCATGGCAGCACATCTGCAGCTGCCGGCCTGTGATCGTGCCGCACAGCTTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp CCCTGGCCAGGCGGAGCCCAGCCTGGAAGCTGTTACTaGGGGTTAGGGTGTCTTTGCCTTTTTGCCTGTAAA +
Preference number: 3 (lower is better)
Translates to: PWPGGAQPGSCY*GLGCLCLFACK
Trigger: TTTACAGGCAAAAAGGCAAAGACACCCTAACCCCCAGTAACAGCTTCCAGGCTGGGCTCCGCCTGGCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp TTCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTaGGCCCCAGACCCTGACTTCCCTTCCCGGTCACCA +
Preference number: 3 (lower is better)
Translates to: FRKNSWLGVPVL*APDPDFPSRSP
Trigger: TGGTGACCGGGAAGGGAAGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp CCTGGAGGGGCAGAACCTCAGCCCTTGGTTCTCCTTTaGGGAAGATTGTGCTTCCCTTCCCAGGCCTCCTTA +
Preference number: 3 (lower is better)
Translates to: PGGAEPQPLVLL*GRLCFPSQASL
Trigger: TAAGGAGGCCTGGGAAGGGAAGCACAATCTTCCCCAAAGGAGAACCAAGGGCTGAGGTTCTGCCCCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp AGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATaGCTTCAGCCATCAGAGGGAGTTCAGGAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: SNPGHLCLTGER*LQPSEGVQESL
Trigger: AAGAGACTCCTGAACTCCCTCTGATGGCTGAAGCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp CACAAGGAGGCAATGCCAAAGGTGCCAGGTGTGTCCTaGTGTGAACCTGCTTTGGGTGGAGTCCCACAGGCA +
Preference number: 3 (lower is better)
Translates to: HKEAMPKVPGVS*CEPALGGVPQA
Trigger: TGCCTGTGGGACTCCACCCAAAGCAGGTTCACACCAGGACACACCTGGCACCTTTGGCATTGCCTCCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp GGGTCAAGTGCTTCAGGAAAAACTCATGGCTGGGTGTaGCCGTTCTTTGGGCCCCAGACCCTGACTTCCCTT +
Preference number: 3 (lower is better)
Translates to: GSSASGKTHGWV*PFFGPQTLTSL
Trigger: AAGGGAAGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGAAGCACTTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CAA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTGGATGCCCATTCTTTTaGCAGAGAGCAGCGGCAGTG +
Preference number: 3 (lower is better)
Translates to: GIRKYQVDGKILATGCGFGCPFF*QRAAAV
Trigger: CACTGCCGCTGCTCTCTGCAAAAAGAATGGGCATCC...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR-3UTR CAA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTTGGGCTTGTCTAAATTaGCGTGGTGTCCTCACCCTC +
Preference number: 3 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGWACLN*RGVLTL
Trigger: GAGGGTGAGGACACCACGCAAATTTAGACAAGCCCA...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR TCA 72 bp CCCTCCCATCAGCTATTCTTGTCACTTGGTCCCATCTaGCCTGCCCCTGCTGGGCGTGCAATTCAAATGCTG +
Preference number: 3 (lower is better)
Translates to: PSHQLFLSLGPI*PAPAGRAIQML
Trigger: CAGCATTTGAATTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCAAGTGACAAGAATAGCTGATGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp CACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATaGTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: HLCSPDFTFPCP*SGKSIPAQGGR
Trigger: CCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp CCATCAGCTATTCTTGTCACTTGGTCCCATCTGACCTaGCCCTGCTGGGCGTGCAATTCAAATGCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: PSAILVTWSHLT*PCWACNSNAGS
Trigger: GGACCCAGCATTTGAATTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCAAGTGACAAGAATAGCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp GCTATTCTTGTCACTTGGTCCCATCTGACCTGCCCCTaGTGGGCGTGCAATTCAAATGCTGGGTCCACTTTG +
Preference number: 3 (lower is better)
Translates to: AILVTWSHLTCP*WACNSNAGSTL
Trigger: CAAAGTGGACCCAGCATTTGAATTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCAAGTGACAAGAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp TGCTGTCTGGCTAGGAGGGCCCAGATGAGTTTGTTCTaGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGC +
Preference number: 3 (lower is better)
Translates to: CCLARRAQMSLF*RGSLDPVPCKC
Trigger: GCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACTCATCTGGGCCCTCCTAGCCAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp ATTCTTGTCACTTGGTCCCATCTGACCTGCCCCTGCTaGGCGTGCAATTCAAATGCTGGGTCCACTTTGGAC +
Preference number: 3 (lower is better)
Translates to: ILVTWSHLTCPC*ACNSNAGSTLD
Trigger: GTCCAAAGTGGACCCAGCATTTGAATTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCAAGTGACAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTaGCCCTGGAATCTCTGGAAAAATAAACTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: HGFLPPSERRLC*PWNLWKNKLRR
Trigger: CCTCCTGAGTTTATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR CCA 72 bp GTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTaGCTTTTTGCAGAACACTCCTTGGAGCAGATTGTG +
Preference number: 3 (lower is better)
Translates to: VPSGREDPGHWM*LFAEHSLEQIV
Trigger: CACAATCTGCTCCAAGGAGTGTTCTGCAAAAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp TGCAAACTCTCTGGAGCCCTAGGAGGATGGTGGTTCTaGAGCCCAGAGCATCTTTTTGGTTTGTCTTGGCAG +
Preference number: 3 (lower is better)
Translates to: CKLSGALGGWWF*SPEHLFGLSWQ
Trigger: CTGCCAAGACAAACCAAAAAGATGCTCTGGGCTCCAGAACCACCATCCTCCTAGGGCTCCAGAGAGTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp TCTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTaGTGGCCCTGGAATCTCTGGAAAAATAAACTCAGG +
Preference number: 3 (lower is better)
Translates to: SHGFLPPSERRL*WPWNLWKNKLR
Trigger: CCTGAGTTTATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
3UTR GCA 72 bp CTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTaGCAAGGCCAGTCGCCTTATTTACACCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: LAHNALNLIIPQ*QGQSPYLHLCS
Trigger: GGAGCAGAGGTGTAAATAAGGCGACTGGCCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTaGATGGGAGATGTGTGTGTGTGTGTGTGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: FWRGSLDPVPCK*MGDVCVCVCVV
Trigger: CACCACACACACACACACACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp TGTGGCTGGGGCTGTGGAGACAATATTCCAGATGAGTaGGTATTGACTAAGTGTGGGACTTTCACCATGGGC +
Preference number: 3 (lower is better)
Translates to: CGWGCGDNIPDE*VLTKCGTFTMG
Trigger: GCCCATGGTGAAAGTCCCACACTTAGTCAATACCCACTCATCTGGAATATTGTCTCCACAGCCCCAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CCA 72 bp GCTGACTACCCCTTTAAAGAGAGGACGGATGGAACCTaGATTGGAAGAAAGAGAACAGTCAAAGTGTCATTC +
Preference number: 3 (lower is better)
Translates to: ADYPFKERTDGT*IGRKRTVKVSF
Trigger: GAATGACACTTTGACTGTTCTCTTTCTTCCAATCCAGGTTCCATCCGTCCTCTCTTTAAAGGGGTAGTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR GCA 72 bp CAATATATACACAGACACAATGTTTTTACTCACTCCTaGTTCCTCCCAAATAATCCCTCACTGGGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: QYIHRHNVFTHS*FLPNNPSLGWA
Trigger: AGCCCAGCCCAGTGAGGGATTATTTGGGAGGAAGCAGGAGTGAGTAAAAACATTGTGTCTGTGTATATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR TCA 72 bp TGGCCCTGGAATCTCTGGAAAAATAAACTCAGGAGGTaGAAAGTTGACTTGGTTTCTTGGTGTTTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: WPWNLWKNKLRR*KVDLVSWCFCF
Trigger: AAAACAAAAACACCAAGAAACCAAGTCAACTTTTCACCTCCTGAGTTTATTTTTCCAGAGATTCCAGGGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGGAGGCCGAGTGCAGTaGCCACCTGCCGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLGGRVQ*PPAAGQ
Trigger: CTGCCCAGCGGCAGGTGGGCACTGCACTCGGCCTCC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCTCCGGGGCCCGTGGTaGCGTTGGCTTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLLRGPW*RWLRSP
Trigger: CGGAGATCGAAGCCAACGTCACCACGGGCCCCGGAG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGGCAGGGGGTCTGGATaGGGCTGTCCGATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLGRGSG*GCPMPA
Trigger: GGCAGGCATCGGACAGCCTCATCCAGACCCCCTGCC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCAGTGCAGTGCCCACCTaGCGCTGGGCAGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSSAVPT*RWAARG
Trigger: CCCGCGAGCTGCCCAGCGGCAGGTGGGCACTGCACT...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCGGCCTTGGGTGGGGGTaGTCCGAGGCCCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSGLGWG*SEAHPQ
Trigger: CTGGGGATGGGCCTCGGAGCACCCCCACCCAAGGCC...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCCCAGCTCGTACTGCGTaGGGCTGGGCCGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSPARTA*GWAGSG
Trigger: ACCTGAGCCGGCCCAGCCTCACGCAGTACGAGCTGG...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCAGCTGTACCGCACGATaGTGGGCACGCCAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLSCTAR*WARQAV
Trigger: GACCGCCTGGCGTGCCCATCATCGTGCGGTACAGCT...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCCCCTGTGGGCCATCTaGCACCCATCTCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLPLWAI*HPSQRW
Trigger: CCACCGCTGAGATGGGTGGCAGATGGCCCACAGGGG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGGTCGGGCACCTCCATaGAGCGGGCATCGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLGRAPP*SGHRAH
Trigger: ATGAGCCCGATGCCCGCTCCATGGAGGTGCCCGACC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGTGGCCGTGGCGCCGTaGACGACCACGTTACGAGGT +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLVAVAP*TTTLRG
Trigger: ACCTCGTAACGTGGTCGTCCACGGCGCCACGGCCAC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGCTGCTTGCTGGGTCTaGCCTTGGGTGGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLAACWV*PWVGVL
Trigger: GAGCACCCCCACCCAAGGCCAGACCCAGCAAGCAGC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGGAGAGGATGGTGGGTaGTTCATCGGGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLGEDGG*FIGGSL
Trigger: CAGGCTGCCCCCGATGAAGCACCCACCATCCTCTCC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCTCTCTCTCTCCAGATaGCCGCCCCACTCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLLSLSR*PPHSVS
Trigger: GGACACGGAGTGGGGCGGGCATCTGGAGAGAGAGAG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCCCCAGAGGAGATGGTaGAGGCGGACACTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLPQRRW*RRTLGP
Trigger: AGGGCCAAGTGTCCGCCTCCACCATCTCCTCTGGGG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGCACCAGCATGCTGCTaGAGGTGGTGGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLAPACC*RWWPVQ
Trigger: CTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCCCAAGCCGGTGAGCTaGGCACTGCGAGACGAGTTG +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLPKPVS*ALRDEL
Trigger: CAACTCGTCTCGCAGTGCCCAGCTCACCGGCTTGGG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGTGGGTGCGCACCAGCTaGGGGGTGCTGCGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAWVRTS*GVLRGP
Trigger: CGGGCCACGCAGCACCCCGCAGCTGGTGCGCACCCA...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCCCCGTGGCTGTGTACTaGCGGGCGCTGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASPVAVY*RALGAS
Trigger: GCTGGCACCCAGCGCCCGGCAGTACACAGCCACGGG...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGCTCTCACATCCTCCTaGTGCACCATCGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLALTSS*CTIGLL
Trigger: CAGCAGGCCGATGGTGCAGCAGGAGGATGTGAGAGC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCATGCCGTTGATGAACTaGGGGCTGGGGGCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLMPLMN*GLGAFQ
Trigger: CTGGAACGCCCCCAGCCCCCAGTTCATCAACGGCAT...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCAGCCAGAATCGGGGCTaGGTGTCCGAGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLSQNRG*VSESFS
Trigger: GGAGAAGGACTCGGACACCCAGCCCCGATTCTGGCT...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCGGATGGGAGGGTGGCTaGGGCTGCCGTCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASGWEGG*GCRPRC
Trigger: GCATCGGGGACGGCAGCCCCAGCCACCCTCCCATCC...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCCCTCCAGGATGCCATTaGGGAACTGCGGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSPPGCH*GTAGLP
Trigger: GGGAAGCCCCGCAGTTCCCCAATGGCATCCTGGAGG...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCGGGCACCAGGCCGCTaGTCTGCAGGCCCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGRAPGR*SAGPRR
Trigger: ACGACGGGGGCCTGCAGATCAGCGGCCTGGTGCCCG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCTGGTCCACGTCAGGTTaGTGGCTCGCCTTTCCACGG +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSWSTSG*WLAFPR
Trigger: CCGTGGAAAGGCGAGCCATCAACCTGACGTGGACCA...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCCTGACTCCCGGGTCCTaGCCACCACCGTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASLTPGS*PPPSGS
Trigger: GGAGCCAGACGGTGGTGGGCAGGACCCGGGAGTCAG...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGGGCGGCAGGGGGCTaGCAGATCAGCCGCACAGAC +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHGAAGG*QISRTD
Trigger: GTCTGTGCGGCTGATCTGGCAGCCCCCTGCCGCCCC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCTGCCGGGCGCTGGGTaGCAGCACCTCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGLPGAG*QHLHSG
Trigger: GCCACTGTGGAGGTGCTGGCACCCAGCGCCCGGCAG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGGAGGCCGAGTGCAGTaGCCACCTGCCGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGGGRVQ*PPAAGQ
Trigger: CTGCCCAGCGGCAGGTGGGCACTGCACTCGGCCTCC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGTCCCTCGGCCACGCCTaGCTGGCGGCCTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLASLGHA*LAASSP
Trigger: AGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGA...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCTAGAGTTCCACAGCTaGAGGCCTGGGCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLLEFHS*RPGLPA
Trigger: AGCTGGAAGCCCAGGCCTGCAGCTGTGGAACTCTAG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGGCCTTGAGGCAGCGTaGACCAGGTGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAGLEAA*TRWGQP
Trigger: GGGCTGCCCCCACCTGGTGCACGCTGCCTCAAGGCC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGCATGCTGCTGGAGGTaGTGGCCAGTGCAGACACAT +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLACCWR*WPVQTH
Trigger: ATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGATGGGAGGGTGGCTaGGGCTGCCGTCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHGWEGG*GCRPRC
Trigger: GCATCGGGGACGGCAGCCCCAGCCACCCTCCCATCC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCTCAGCCGCACAGACGTaGTCCGCACCTCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSSAAQT*SAPLGT
Trigger: TGTTCCCAGAGGTGCGGACCACGTCTGTGCGGCTGA...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGTGCCCACCTGCCGCTaGGCAGCTCGCGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQVPTCR*AARGSG
Trigger: TCCAGACCCGCGAGCTGCCCAGCGGCAGGTGGGCAC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCAAGCTGGAGGCATTGTaGCTCACGGAGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSKLEAL*LTEAEC
Trigger: GCACTCGGCCTCCGTGAGCCACAATGCCTCCAGCTT...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCCCGAGCTGGGAGCGCTaGGGGCTGCTTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASPSWER*GLLAGS
Trigger: AGACCCAGCAAGCAGCCCCCAGCGCTCCCAGCTCGG...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCACGCCAGGCGGTCCTaGGGCACCTTCTCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGHARRS*GTFSGA
Trigger: GGCCCCGGAGAAGGTGCCCCAGGACCGCCTGGCGTG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCGCTGGACCAGTGAATaGCGATGGCAGAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLRWTSE*RWQSCT
Trigger: GGTACAGCTCTGCCATCGCCATTCACTGGTCCAGCG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGGTCCTGGAGGGGCTaGAAGGGGGCAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHGSWRG*KGAAGW
Trigger: CCAGCCAGCTGCCCCCTTCCAGCCCCTCCAGGACCC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGGGTCCTGGAGGGGCTaGAAGGGGGCAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQGSWRG*KGAAGW
Trigger: CCAGCCAGCTGCCCCCTTCCAGCCCCTCCAGGACCC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGTGCGCGGGGCACGGATaGCAGCTGCTTCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLACAGHG*QLLLRG
Trigger: CCCACGGAGAAGCAGCTGTCATCCGTGCCCCGCGCA...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTGGGGTTGGGGATGGTaGGCCGGCGGTTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGWGWGW*AGGCGH
Trigger: GTGACCACAACCGCCGGCTCACCATCCCCAACCCCA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCAGCTGTACCGCACGATaGTGGGCACGCCAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGSCTAR*WARQAV
Trigger: GACCGCCTGGCGTGCCCATCATCGTGCGGTACAGCT...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCTTTTCTCCCTCCTTCTaGACGCCGGCTTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSFSPSF*TPALLA
Trigger: GGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAA...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGAGCAGGTGTCCAGCTaGCTCCACTGCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGEQVSS*LHCSPQ
Trigger: CTGGGGGCTGCAGTGGAGTCAGCTGGACACCTGCTC...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCCAGAGGGGACGCTGCTaGTGCGCAGGACAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGQRGRC*CAGQPH
Trigger: GTGAGGCTGTCCTGCGCAGCAGCAGCGTCCCCTCTG...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCCCCCCGTCGTTGCGCTaGCGGAAGCGGGTCAACTTC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASPPSLR*RKRVNF
Trigger: GAAGTTGACCCGCTTCCGGCAGCGCAACGACGGGGG...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGACCAGGCCGCTGATCTaGAGGCCCCCGTCGTTGCGC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLATRPLI*RPPSLR
Trigger: GCGCAACGACGGGGGCCTGCAGATCAGCGGCCTGGT...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGGCGCGTGGGGCAGTTaGCTGACTCGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQGAWGS*LTRRWA
Trigger: TGCCCACCTGCGAGTCAGGCAACTGCCCCACGCGCC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCGCTCCACACGGTCCTaGACCACGTGGCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGRSTRS*TTWLSV
Trigger: GACGCTGAGCCACGTGGTGCAGGACCGTGTGGAGCG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCCCGTGGCTGTGTACTaGCGGGCGCTGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGPVAVY*RALGAS
Trigger: GCTGGCACCCAGCGCCCGGCAGTACACAGCCACGGG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATCTCACGGAGGCCGAGTaGAGTGCCCACCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHLTEAE*SAHLPL
Trigger: CAGCGGCAGGTGGGCACTGCACTCGGCCTCCGTGAG...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGGCCTTGGGTGGGGGTaGTCCGAGGCCCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEGLGWG*SEAHPQ
Trigger: CTGGGGATGGGCCTCGGAGCACCCCCACCCAAGGCC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCCCTGTGCCCTCGAGATaGCCTTCTGCTGTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGPVPSR*PSAVAA
Trigger: GGCGGCGACAGCAGAAGGGCATCTCGAGGGCACAGG...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTGGGCCGAAAGAGGCTaGCCTGCTGGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGWAERG*PAGCWC
Trigger: GCACCAGCACCCAGCAGGGCAGCCTCTTTCGGCCCA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCCGGCAGCTGCAGATGTaGTGCCATGGAGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSRQLQM*CHGDAR
Trigger: TCTGGCATCTCCATGGCAGCACATCTGCAGCTGCCG...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCGGGAGGGGCAGCGCTTaGCTACCCCAACCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGGRGSA*LPQPFL
Trigger: GAGGAAGGGTTGGGGTAGCCAAGCGCTGCCCCTCCC...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCTCTCCGTGCCCAGGGTaGCCCCGTCCTTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASSPCPG*PRPSPR
Trigger: TCTGGGAGAAGGACGGGGCCACCCTGGGCACGGAGA...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCGGGCATCGGGCTCATTaGAGAGCTGGTGGATCAGCA +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSGHRAH*RAGGSA
Trigger: TGCTGATCCACCAGCTCTCCAATGAGCCCGATGCCC...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCATGGCGTTGAAGGCCTaGACCTGGACGCGGTACTCT +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSMALKA*TWTRYS
Trigger: AGAGTACCGCGTCCAGGTCCAGGCCTTCAACGCCAT...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTGTACTGCCGGGCGCTaGGTGCCAGCACCTCCACAG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGCTAGR*VPAPPQ
Trigger: CTGTGGAGGTGCTGGCACCCAGCGCCCGGCAGTACA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGTGGCCGTGGCGCCGTaGACGACCACGTTACGAGGT +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGVAVAP*TTTLRG
Trigger: ACCTCGTAACGTGGTCGTCCACGGCGCCACGGCCAC...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCTCACGTCCAGCTGTGTaGCCGTGGCGCCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASSRPAV*PWRRGR
Trigger: TCGTCCACGGCGCCACGGCCACACAGCTGGACGTGA...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCTGGGGGCTGCTTGCTaGGTCTGGCCTTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLALGAAC*VWPWVG
Trigger: CCCCACCCAAGGCCAGACCCAGCAAGCAGCCCCCAG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGCTGGGGGCTGCTTGCTaGGTCTGGCCTTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQLGAAC*VWPWVG
Trigger: CCCCACCCAAGGCCAGACCCAGCAAGCAGCCCCCAG...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCACAGTGATGGTGCATaGAGGGAAGGAGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLHSDGA*REGGAE
Trigger: CTCTGCTCCTCCTTCCCTCCATGCACCATCACTGTG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGTCTTTCTGGCTCCTTaGCAAACTGAGGCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLVFLAP*QTEAVP
Trigger: TGGAACCGCCTCAGTTTGTCAAGGAGCCAGAAAGAC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGTTGGCCCTGGCCCTTTaGGGTCATGGCGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLALALAL*GHGGHL
Trigger: GAGGTGGCCGCCATGACCTCAAAGGGCCAGGGCCAA...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGACCTCGGTTTGCCGCTaGAGCAGGGCCCCCATTCGG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQTSVCR*SRAPIR
Trigger: CCGAATGGGGGCCCTGCTGCAGCGGCAAACCGAGGT...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGAGTAGCCGGCGTCACTaGCGGTGGGGTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQSSRRH*RWGWGW
Trigger: CCATCCCCAACCCCACCGGCAGTGACGCCGGCTACT...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGAGGATGGCTCTCCGTaGCCAGGGTGGCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEEDGSP*PGWPRP
Trigger: AGGACGGGGCCACCCTGGGCACGGAGAGCCATCCTC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCACATCCTCATGGGTaGGCACCAGCTGCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAAHPHG*APAAGC
Trigger: GCACCCCGCAGCTGGTGCGCACCCATGAGGATGTGC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGCGTGGCTCAGCGTCTTaGCATGCCCGTCTGACCGGC +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQRGSAS*HARLTG
Trigger: GCCGGTCAGACGGGCATGGCAAGACGCTGAGCCACG...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCTGACTCCCGGGTCCTaGCCACCACCGTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKELTPGS*PPPSGS
Trigger: GGAGCCAGACGGTGGTGGGCAGGACCCGGGAGTCAG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCTCATCGGGGGCAGCCTaGAGGGTGGTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASSSGAA*RVVSDS
Trigger: GGAGTCACTGACCACCCTGCAGGCTGCCCCCGATGA...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCTCCATCCACGGGGCTaGAGGGCTCGTACACCAGCC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLALHPRG*RARTPA
Trigger: GGCTGGTGTACGAGCCCTGCAGCCCCGTGGATGGAG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATCCTGTGCCCTCGAGATaGCCTTCTGCTGTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHPVPSR*PSAVAA
Trigger: GGCGGCGACAGCAGAAGGGCATCTCGAGGGCACAGG...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCGCTCCTGTGCCTCTGTaGTTAGGAGGCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGAPVPL*LGGCRV
Trigger: CACCCGGCAGCCTCCTAAGCACAGAGGCACAGGAGC...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGCTGAGGGAAGCCCCTaGCCAGCCAGAGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHAEGSP*PARVAL
Trigger: CAGTGCCACTCTGGCTGGGCAGGGGCTTCCCTCAGC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCCGAGGGGGCACCTGTaGTCAGGTGGTGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGPRGHL*SGGGQD
Trigger: ATCCTGACCACCACCTGAGCACAGGTGCCCCCTCGG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGCAGGTCACCTGTGGCTaGGGGAAGCTGGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQQVTCG*GKLAMR
Trigger: GCGCATCGCCAGCTTCCCCCAGCCACAGGTGACCTG...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGCCAGGCACATCCTCATaGGTGCGCACCAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQPGTSS*VRTSCG
Trigger: CCCGCAGCTGGTGCGCACCCATGAGGATGTGCCTGG...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCGGGTCACACGGGTGTTaGTTCGATTGTACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSGSHGC*FDCTPP
Trigger: GGGAGGAGTACAATCGAACCAACACCCGTGTGACCC...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCGCGGACACTTGGCCCTaGCCCTTTGAGGTCATGGCG +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASADTWP*PFEVMA
Trigger: CGCCATGACCTCAAAGGGCCAGGGCCAAGTGTCCGC...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCGTGGAGGCGGACACTTaGCCCTGGCCCTTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASVEADT*PWPFEV
Trigger: GACCTCAAAGGGCCAGGGCCAAGTGTCCGCCTCCAC...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGGTCGGGCACCTCCATaGAGCGGGCATCGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGGRAPP*SGHRAH
Trigger: ATGAGCCCGATGCCCGCTCCATGGAGGTGCCCGACC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCGGTCCTGCACCACGTaGCTCAGCGTCTTGCCATGC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGRSCTT*LSVLPC
Trigger: GCATGGCAAGACGCTGAGCCACGTGGTGCAGGACCG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCCCAAGCCGGTGAGCTaGGCACTGCGAGACGAGTTG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGPKPVS*ALRDEL
Trigger: CAACTCGTCTCGCAGTGCCCAGCTCACCGGCTTGGG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCGCCCATGGGTGGTCCTaGGACATCATCCAGCGTCCG +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASAHGWS*DIIQRP
Trigger: CGGACGCTGGATGATGTCCCAGGACCACCCATGGGC...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGCTGTCCAGCGGAGGTaGCTCCCAAGTCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGAVQRR*LPSHVQ
Trigger: CTGGACGTGACTTGGGAGCCACCTCCGCTGGACAGC...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTGCTTGCTGGGTCTaGCCTTGGGTGGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAAACWV*PWVGVL
Trigger: GAGCACCCCCACCCAAGGCCAGACCCAGCAAGCAGC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTCACGCCAGGCGGTCCTaGGGCACCTTCTCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISHARRS*GTFSGA
Trigger: GGCCCCGGAGAAGGTGCCCCAGGACCGCCTGGCGTG...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCAAGGAGTGGGCCTTCTaGTGGTTTGAGTCGACCTCG +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSKEWAF*WFESTS
Trigger: CGAGGTCGACTCAAACCACCAGAAGGCCCACTCCTT...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGGGGTTCTGGGGCGTTaGAGTCCGACTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAGVLGR*SPTGLG
Trigger: CCCAAGGCCAGTCGGACTCCAACGCCCCAGAACCCC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGGGGTTCTGGGGCGTTaGAGTCCGACTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGGVLGR*SPTGLG
Trigger: CCCAAGGCCAGTCGGACTCCAACGCCCCAGAACCCC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCACAGGGCAGGGGGTCTaGATGAGGCTGTCCGATGCC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGTGQGV*MRLSDA
Trigger: GGCATCGGACAGCCTCATCCAGACCCCCTGCCCTGT...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCGGTGGGGCAGGTGTTaGGCTGGCCTTACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGRWGRC*AGLTGL
Trigger: CAGCCCTGTAAGGCCAGCCCAACACCTGCCCCACCG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCGAAGGGGAGGCAGCCTaGGTTTGCAAACTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSEGEAA*VCKLSG
Trigger: TCCAGAGAGTTTGCAAACCCAGGCTGCCTCCCCTTC...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 72 bp CCCGAGGGGGCACCTGTGCTCAGGTGGTGGTCAGGATaGCCATGTGCGCATGCCCATGGGTGTCCCTGGATA +
Preference number: 4 (lower is better)
Translates to: PEGAPVLRWWSG*PCAHAHGCPWI
Trigger: TATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCTGAGCACAGGTGCCCCCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCCGACTCCAGGGGTGTaGAGCGAGGCAGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEPTPGV*SEAAAQ
Trigger: CTGTGCAGCTGCCTCGCTTCACACCCCTGGAGTCGG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCCCGGCTCTTGCCAGCTaGCCTTCAGCGATGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASPALAS*PSAMCP
Trigger: TGGACACATCGCTGAAGGTCAGCTGGCAAGAGCCGG...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCTCTTCACTCGCTCTGTaGGGTTCCCCCGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASSSLAL*GSPAGL
Trigger: AAGCCCAGCGGGGGAACCTCACAGAGCGAGTGAAGA...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCTCCGGGGCCCGTGGTaGCGTTGGCTTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLLRGPW*RWLRSP
Trigger: CGGAGATCGAAGCCAACGTCACCACGGGCCCCGGAG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTGCTGGTGCTGTTGGTaGCGGTGGTGTGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGCWCCW*RWCGLA
Trigger: AGCCAGACCACACCACCGTCACCAACAGCACCAGCA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCAGCATGGGTGCGAATaGGCGTGTGGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGQHGCE*ACGEWG
Trigger: CCCCCACTCCCCACACGCTCATTCGCACCCATGCTG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGTGTGGGTGTGGAGCTaGCGTCAACTCTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAVWVWS*RQLWRR
Trigger: GCGCCTCCAGAGTTGACGTCAGCTCCACACCCACAC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAGAGTGGCCACTGGGTaGTCGGGCGCGTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWRVATG*SGAWGS
Trigger: ACTGCCCCACGCGCCCGAGCACCCAGTGGCCACTCT...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCACCGTGGGAACTCCCTaGAGCGTCCACTCGGTGACT +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASTVGTP*SVHSVT
Trigger: AGTCACCGAGTGGACGCTGCAGGGAGTTCCCACGGT...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGGCCATGTCAGGGGGTaGCTGCAGGGTCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGGHVRG*LQGLDL
Trigger: AAGATCCAGACCCTGCAGGCACCCCCTGACATGGCC...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCCTCAGCGTCTTGCCATaGCCGTCTGACCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASLSVLP*PSDRLY
Trigger: GTACAGCCGGTCAGACGGGCATGGCAAGACGCTGAG...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTGGGGCGGCAGGGGGCTaGCAGATCAGCCGCACAGAC +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTGAAGG*QISRTD
Trigger: GTCTGTGCGGCTGATCTGGCAGCCCCCTGCCGCCCC...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCAGCAGCACGCTGCGTaGTCTCACATCCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGQQHAA*SHILLL
Trigger: CAGCAGGAGGATGTGAGAGCACGCAGCGTGCTGCTG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGGAGAGGATGGTGGGTaGTTCATCGGGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGGEDGG*FIGGSL
Trigger: CAGGCTGCCCCCGATGAAGCACCCACCATCCTCTCC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCCCAGGGCAGGGAAGCTaGTTTCATCCAAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSPGQGS*FHPSSS
Trigger: TGATGAGCTTGGATGAAAGCAGCTTCCCTGCCCTGG...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCTCTCTCTCTCCAGATaGCCGCCCCACTCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLALSLSR*PPHSVS
Trigger: GGACACGGAGTGGGGCGGGCATCTGGAGAGAGAGAG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGGGGGACACATCATCTTaGGCTCTGGCCGCGCGGATC +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQGDTSS*ALAARI
Trigger: GATCCGCGCGGCCAGAGCCCAAGATGATGTGTCCCC...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGAGGCGGATACGAGGATaGCTCTCCGTGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLARRIRG*LSVPRV
Trigger: CACCCTGGGCACGGAGAGCCATCCTCGTATCCGCCT...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGTGCTCGGGCGCGTaGGGCAGTTGCCTGACTCGC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISGCSGA*GSCLTR
Trigger: GCGAGTCAGGCAACTGCCCCACGCGCCCGAGCACCC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCTGCCCGGAGGGACCGTaGGAACTCCCTGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLCPEGP*ELPAAS
Trigger: GGACGCTGCAGGGAGTTCCCACGGTCCCTCCGGGCA...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCCAGGCACATCCTCATaGGTGCGCACCAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEPGTSS*VRTSCG
Trigger: CCCGCAGCTGGTGCGCACCCATGAGGATGTGCCTGG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGTGGAGGCGGACACTTaGCCCTGGCCCTTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGVEADT*PWPFEV
Trigger: GACCTCAAAGGGCCAGGGCCAAGTGTCCGCCTCCAC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGCACCCCAGAGGAGATaGTGGAGGCGGACACTTGGC +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHAPQRR*WRRTLG
Trigger: GCCAAGTGTCCGCCTCCACCATCTCCTCTGGGGTGC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGGGCCCTGGGAGTTCTaGGGGCACCCCAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEGPWEF*GHPRGD
Trigger: ATCTCCTCTGGGGTGCCCCCAGAACTCCCAGGGCCC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCCTCCAGGTCCTCGATaGTGTAGTCCCGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGPPGPR*CSPAPH
Trigger: GTGTGGAGCGGGACTACACCATCGAGGACCTGGAGG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATCGTGGTCCGCACCTCTaGGAACAGGATGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHRGPHL*EQDAHG
Trigger: CCCATGGGCATCCTGTTCCCAGAGGTGCGGACCACG...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGCACCATCGGCCTGCTaGGGGGCTGCGGACGGTCTC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISAPSAC*GAADGL
Trigger: GAGACCGTCCGCAGCCCCCCAGCAGGCCGATGGTGC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTCACGGAGAGGATGGTaGGTGCTTCATCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGSRRGW*VLHRGQ
Trigger: CTGCCCCCGATGAAGCACCCACCATCCTCTCCGTGA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGTCACGGAGAGGATaGTGGGTGCTTCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAASRRG*WVLHRG
Trigger: CCCCCGATGAAGCACCCACCATCCTCTCCGTGACGC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGCGTCACGGAGAGGATaGTGGGTGCTTCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHASRRG*WVLHRG
Trigger: CCCCCGATGAAGCACCCACCATCCTCTCCGTGACGC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATACGGAGGTGGTGGTGTaGGGCGTCACGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHTEVVV*GVTERM
Trigger: CATCCTCTCCGTGACGCCCCACACCACCACCTCCGT...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCTTAGCACGGAGGTGGTaGTGTGGGGCGTCACGGAGA +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASLARRW*CGASRR
Trigger: TCTCCGTGACGCCCCACACCACCACCTCCGTGCTAA...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGGATTAGCACGGAGGTaGTGGTGTGGGGCGTCACGG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAGLARR*WCGASR
Trigger: CCGTGACGCCCCACACCACCACCTCCGTGCTAATCC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGCCAGCTGTGTGGCCGTaGCGCCGTGGACGACCACGT +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWPAVWP*RRGRPR
Trigger: ACGTGGTCGTCCACGGCGCCACGGCCACACAGCTGG...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGCTGTCCAGCGGAGGTaGCTCCCAAGTCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHAVQRR*LPSHVQ
Trigger: CTGGACGTGACTTGGGAGCCACCTCCGCTGGACAGC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCCTCCAGGATGCCATTaGGGAACTGCGGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAPPGCH*GTAGLP
Trigger: GGGAAGCCCCGCAGTTCCCCAATGGCATCCTGGAGG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATTGCCCGGGTCTCCGCTaGACCAGTGAATGGCGATGG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHCPGLR*TSEWRW
Trigger: CCATCGCCATTCACTGGTCCAGCGGAGACCCGGGCA...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCACTGGGAGGGGCTGCTaGGGGTGCCGAAACCATAGT +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGTGRGC*GCRNHS
Trigger: ACTATGGTTTCGGCACCCCCAGCAGCCCCTCCCAGT...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCCCGAGTCTGTCTTCTTaGCGTACTTCTTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSPSLSS*RTSCSG
Trigger: GCCAGAGCAAGAAGTACGCCAAGAAGACAGACTCGG...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGGCGTTGGAGTCCGACTaGCCTTGGGCCGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQALESD*PWAERG
Trigger: GCCTCTTTCGGCCCAAGGCCAGTCGGACTCCAACGC...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGCGTTGGAGTCCGACTaGCCTTGGGCCGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQALESD*PWAERG
Trigger: GCCTCTTTCGGCCCAAGGCCAGTCGGACTCCAACGC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGACAGGGCAGGGGGTCTaGATGAGGCTGTCCGATGCC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLATGQGV*MRLSDA
Trigger: GGCATCGGACAGCCTCATCCAGACCCCCTGCCCTGT...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTCTGGACCAGGGACTTaGGCCACCCCTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGSGPGT*ATPLGS
Trigger: GGAGCCCAGAGGGGTGGCCCAAGTCCCTGGTCCAGA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCTCCGTAAGTACCAAGTaGACGGGAAGATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSSVSTK*TGRSWP
Trigger: TGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGA...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCCACCGTTGACAGGATaGCAAGGGTGTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGPPLTG*QGCSPA
Trigger: CGCTGGAGAACACCCTTGTCATCCTGTCAACGGTGG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCTCCAAGGTAACCTCTaGGGTGCCGGCCACCACGCT +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGLQGNL*GAGHHA
Trigger: AGCGTGGTGGCCGGCACCTCAGAGGTTACCTTGGAG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCGGCTCCTTGACAAACTaGGGCGGTTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGGSLTN*GGSSTE
Trigger: CTCAGTGCTGGAACCGCCTCAGTTTGTCAAGGAGCC...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGTCCCGACCACGTCTGTaGGATGTGCAGGGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGSRPRL*DVQGAV
Trigger: AACGGCTCCCTGCACATCTCACAGACGTGGTCGGGA...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGTGGGGGCGTTCCAGGTaGAGCGGATGGTCGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQWGRSR*SGWSWN
Trigger: ATTCCACGACCATCCGCTTCACCTGGAACGCCCCCA...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCTGTCCAGGATCTCACTaGAGCTCAGGTGTCCCACGG +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASCPGSH*SSGVPR
Trigger: CCGTGGGACACCTGAGCTTCAGTGAGATCCTGGACA...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCCGGCTCTTGCCAGCTaGCCTTCAGCGATGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAPALAS*PSAMCP
Trigger: TGGACACATCGCTGAAGGTCAGCTGGCAAGAGCCGG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCCATCGTAGCCTGGCCTaGACTGCAAGGTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASHRSLA*TARSQS
Trigger: GCTCTGTGACCTTGCAGTTCAGGCCAGGCTACGATG...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGACAGACTCTGGCTTaGGGCCCGTGGCTGTGTACT +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASRQTLA*GPWLCT
Trigger: AGTACACAGCCACGGGCCTCAAGCCAGAGTCTGTCT...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGTGCGGGTCTGGGCCGTaGTGCGGAACAGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: PPPLSNVARFLGGRLGASCGSGP*CGTGRQ
Trigger: CTGTCTACCTGTTCCGCATCACGGCCCAGACCCGCA...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCTGCAGGGTGGTCAGTaGCTCCGACTCCTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLALQGGQ*LRLLAE
Trigger: TTCAGCGAGGAGTCGGAGTCACTGACCACCCTGCAG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCTGCAGGGTGGTCAGTaGCTCCGACTCCTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGLQGGQ*LRLLAE
Trigger: TTCAGCGAGGAGTCGGAGTCACTGACCACCCTGCAG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCCAGGAGGATGCCATTaGTCTTGTCCTCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGPGGCH*SCPLLA
Trigger: CGCCAGCAGAGGACAAGATCAATGGCATCCTCCTGG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGTGCTGGTGCTGTTGGTaGCGGTGGTGTGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQCWCCW*RWCGLA
Trigger: AGCCAGACCACACCACCGTCACCAACAGCACCAGCA...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTGGCAGGGGGTCTGGATaGGGCTGTCCGATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTGRGSG*GCPMPA
Trigger: GGCAGGCATCGGACAGCCTCATCCAGACCCCCTGCC...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGCTGCCGGGTGGCAGTaGGAGGGACACAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGAAGWQ*EGHRSE
Trigger: TTCAGATCTGTGTCCCTCTCACTGCCACCCGGCAGC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGGGCACGGATGACAGCTaGTTCTCCGTGGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQGTDDS*FSVGDA
Trigger: AGCGTCTCCCACGGAGAAGCAGCTGTCATCCGTGCC...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGAGGGGACGCTGCTGCTaGGCAGGACAGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGRGRCC*AGQPHT
Trigger: AGTGTGAGGCTGTCCTGCGCAGCAGCAGCGTCCCCT...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCTTCCGCGTGCACATTaGCCGGAGGGACCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGLPRAH*PEGPWE
Trigger: TTCCCACGGTCCCTCCGGGCAATGTGCACGCGGAAG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGCCATGTCAGGGGGTaGCTGCAGGGTCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHGHVRG*LQGLDL
Trigger: AAGATCCAGACCCTGCAGGCACCCCCTGACATGGCC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCGCTCCACACGGTCCTaGACCACGTGGCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLRSTRS*TTWLSV
Trigger: GACGCTGAGCCACGTGGTGCAGGACCGTGTGGAGCG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCCAGCACGAGCCCGTTaGGATCAGCCTCGGGGACCT +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLPARAR*DQPRGP
Trigger: AGGTCCCCGAGGCTGATCGCAACGGGCTCGTGCTGG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTCTCACATCCTCCTaGTGCACCATCGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAALTSS*CTIGLL
Trigger: CAGCAGGCCGATGGTGCAGCAGGAGGATGTGAGAGC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCAGCAGCACGCTGCGTaGTCTCACATCCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGQQHAA*SHILLL
Trigger: CAGCAGGAGGATGTGAGAGCACGCAGCGTGCTGCTG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCAGTGCAGTGCCCACCTaGCGCTGGGCAGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: FSLNPGIRKYQVDGKILASAVPT*RWAARG
Trigger: CCCGCGAGCTGCCCAGCGGCAGGTGGGCACTGCACT...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCACGTTACGAGGTGCTaGTGTGGGCACTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEHVTRC*CGHCLP
Trigger: GGGGAGGCAGTGCCCACAGCAGCACCTCGTAACGTG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGACCACGTTACGAGGTaGTGCTGTGGGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLADHVTR*CCGHCL
Trigger: GAGGCAGTGCCCACAGCAGCACCTCGTAACGTGGTC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATCTCGAGATGCCCTTCTaGTGTCGCCGCCACGAGTTG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHLEMPF*CRRHEL
Trigger: CAACTCGTGGCGGCGACAGCAGAAGGGCATCTCGAG...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCGAAAGAGGCTGCCCTaGTGGGTGCTGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLARKRLP*WVLVLL
Trigger: CAACAGCACCAGCACCCAGCAGGGCAGCCTCTTTCG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCTCTGAACGCCGGCTTTaGTGGCCCTGGAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASSERRL*WPWNLW
Trigger: CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGA...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGGAGATGCCAGATGCTaGAGAGGGTGGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWGDARC*RGWGRR
Trigger: CCTCCGCCCCCACCCTCTGCAGCATCTGGCATCTCC...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGTCACAGGCCGGCAGCTaGAGATGTGCTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGSQAGS*RCAAME
Trigger: CTCCATGGCAGCACATCTGCAGCTGCCGGCCTGTGA...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGTCCCCTTTACCTTCCTaGCCACCAGCCCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLASPLPS*PPAPHP
Trigger: TGGGTGAGGGGCTGGTGGGCAGGAAGGTAAAGGGGA...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCGTCAGGATTGCCATGTaGGCATGCCCATGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASVRIAM*ACPWVS
Trigger: GGACACCCATGGGCATGCGCACATGGCAATCCTGAC...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGCGGCGGCACACCTTTaGCCTGACAGGGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEAAAHL*PDRGCP
Trigger: TGGACATCCCCTGTCAGGCCAAAGGTGTGCCGCCGC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCACTCCAGGGTCACGTTaGGCAGGTAGTGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGTPGSR*AGSGSH
Trigger: GTGTGACCCACTACCTGCCCAACGTGACCCTGGAGT...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGGCCCTTTGAGGTCATaGCGGCCACCTCGATGGTGT +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAGPLRS*RPPRWC
Trigger: ACACCATCGAGGTGGCCGCCATGACCTCAAAGGGCC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCCCCAGAGGAGATGGTaGAGGCGGACACTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEPQRRW*RRTLGP
Trigger: AGGGCCAAGTGTCCGCCTCCACCATCTCCTCTGGGG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATTGCGCAGAGACACATTaGCTGGGGCCATGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHCAETH*LGPCQG
Trigger: CCCCTGACATGGCCCCAGCCAATGTGTCTCTGCGCA...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCGGTCCTGCACCACGTaGCTCAGCGTCTTGCCATGC +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKERSCTT*LSVLPC
Trigger: GCATGGCAAGACGCTGAGCCACGTGGTGCAGGACCG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCCTCCAGGTCCTCGATaGTGTAGTCCCGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAPPGPR*CSPAPH
Trigger: GTGTGGAGCGGGACTACACCATCGAGGACCTGGAGG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCGTGCAGACACATTGGTaGGGCCGGAAGAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASVQTHW*GRKREL
Trigger: CAGTTCCCTCTTCCGGCCCCACCAATGTGTCTGCAC...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCCAGTGCAGACACATTaGTGGGGCCGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGPVQTH*WGRKRE
Trigger: TTCCCTCTTCCGGCCCCACCAATGTGTCTGCACTGG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGCAGCCCTTGCGGGTCTaGGCCGTGATGCGGAACAGG +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWQPLRV*AVMRNR
Trigger: CCTGTTCCGCATCACGGCCCAGACCCGCAAGGGCTG...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGGTCTCTCTTCTCGGTaGTCACCACCAAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQGLSSR*SPPRPR
Trigger: CCGAGGCCTTGGTGGTGACCACCGAGAAGAGAGACC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGAAGCTGGAGGCATTGTaGCTCACGGAGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQKLEAL*LTEAEC
Trigger: GCACTCGGCCTCCGTGAGCCACAATGCCTCCAGCTT...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGTGCCCGGGTCTCCGCTaGACCAGTGAATGGCGATGG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKECPGLR*TSEWRW
Trigger: CCATCGCCATTCACTGGTCCAGCGGAGACCCGGGCA...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGACTGGGAGGGGCTGCTaGGGGTGCCGAAACCATAGT +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLATGRGC*GCRNHS
Trigger: ACTATGGTTTCGGCACCCCCAGCAGCCCCTCCCAGT...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGTTGGCTTTCTGGGCTaGCACAGACTGGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAVGFLG*HRLGGA
Trigger: AGCCCCTCCCAGTCTGTGCCAGCCCAGAAAGCCAAC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGTTGGCTTTCTGGGCTaGCACAGACTGGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGVGFLG*HRLGGA
Trigger: AGCCCCTCCCAGTCTGTGCCAGCCCAGAAAGCCAAC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGACGGTGGTGTGGTCTaGCTCACCCGAGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEDGGVV*LTRVAL
Trigger: GAGAGCGACTCGGGTGAGCCAGACCACACCACCGTC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCCCCACTCCCCAGCCTTaGGAAGCTGACTACCCCTTT +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGPTPQP*EADYPF
Trigger: AAAGGGGTAGTCAGCTTCCCAAGGCTGGGGAGTGGG...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGGGTATTCCAGCCTCTaGACCAGGGACTTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAGYSSL*TRDLGH
Trigger: GTGGCCCAAGTCCCTGGTCCAGAGGCTGGAATACCC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGGTGTGCCCGTTCTTTaGGCCCCAGACCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGGVPVL*APDPDF
Trigger: GAAGTCAGGGTCTGGGGCCCAAAGAACGGGCACACC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCCCAGCATGGGCTCCTaGGTGCAACACTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGPSMGS*VQHWEI
Trigger: AATCTCCCAGTGTTGCACCCAGGAGCCCATGCTGGG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGCTGGCCGCGCGGATCTaGTGCAGAGCTAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWLAARI*CRASSV
Trigger: GACACTGCTAGCTCTGCATCAGATCCGCGCGGCCAG...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTAGGCGGTTCCAGCACTaGGAGGTAGGCGCCCCGGAC +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFRRFQH*EVGAPD
Trigger: GTCCGGGGCGCCTACCTCTCAGTGCTGGAACCGCCT...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCCTTTCCCCACGTCGTTaGCGGCACAAAGACGGAACT +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASLSPRR*RHKDGT
Trigger: AGTTCCGTCTTTGTGCCGTCAACGACGTGGGGAAAG...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTTGGCCCTGGCCCTTTaGGGTCATGGCGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISLALAL*GHGGHL
Trigger: GAGGTGGCCGCCATGACCTCAAAGGGCCAGGGCCAA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAGACAGACTCTGGCTTaGGGCCCGTGGCTGTGTACT +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGRQTLA*GPWLCT
Trigger: AGTACACAGCCACGGGCCTCAAGCCAGAGTCTGTCT...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCTGCGGGTCTGGGCCGTaGTGCGGAACAGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLCGSGP*CGTGRQ
Trigger: CTGTCTACCTGTTCCGCATCACGGCCCAGACCCGCA...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGACTCCGACTCCTCGCTaGACTCGCTGTCGCCAATGT +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLATPTPR*TRCRQC
Trigger: ACATTGGCGACAGCGAGTTCAGCGAGGAGTCGGAGT...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCTTCCCAAGGGAGCAGTaGACCCCACCATCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGFPREQ*TPPSQS
Trigger: GCTTTGAGATGGTGGGGTTCACTGCTCCCTTGGGAA...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTTTGGGCCCCAGACCCTaGCTTCCCTTCCCGGTCACC +
Preference number: 4 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGLGPRP*LPFPVT
Trigger: GGTGACCGGGAAGGGAAGTCAGGGTCTGGGGCCCAA...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATCGGTTTCCTTCCAAGTaGACCTGTGTCCGCACAGGC +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHRFPSK*TCVRTG
Trigger: GCCTGTGCGGACACAGGTGCACTTGGAAGGAAACCG...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACCTGGACCTCGGTTTaGCGCTGCAGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: FSLNPGIRKYQVDGKILATWTSV*RCSRAP
Trigger: GGGGGCCCTGCTGCAGCGGCAAACCGAGGTCCAGGT...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGCACTGCGAGAGTCGTTaGCTCCTGCTGAGATCACCC +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQHCESR*LLLRSP
Trigger: GGGTGATCTCAGCAGGAGGCAACGACTCTCGCAGTG...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCACTGCGAGACGAGTTaGCTTCCACCAGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGHCETS*LPPARI
Trigger: GATTCTGGCTGGTGGAAGGCAACTCGTCTCGCAGTG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGCACGTTACGAGGTGCTaGTGTGGGCACTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWHVTRC*CGHCLP
Trigger: GGGGAGGCAGTGCCCACAGCAGCACCTCGTAACGTG...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGGACCACGTTACGAGGTaGTGCTGTGGGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGDHVTR*CCGHCL
Trigger: GAGGCAGTGCCCACAGCAGCACCTCGTAACGTGGTC...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATATGCCATTGGGGAACTaGGGGGCTTCCCAGGACACA +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHMPLGN*GASQDT
Trigger: TGTGTCCTGGGAAGCCCCGCAGTTCCCCAATGGCAT...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGTAGCTGTAGGCCTGTaGCCTCGAGATGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHVAVGL*PRDALL
Trigger: CAGAAGGGCATCTCGAGGGCACAGGCCTACAGCTAC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGTAGCTGTAGGCCTGTaGCCTCGAGATGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQVAVGL*PRDALL
Trigger: CAGAAGGGCATCTCGAGGGCACAGGCCTACAGCTAC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGACTCATGGCTGGGTGTaGCCGTTCTTTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKETHGWV*PFFGPQ
Trigger: CTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGT...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTGGGAAAGCCCTGGTGTaGCCAGCATGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTGKALV*PAWAPG
Trigger: CCCAGGAGCCCATGCTGGGCACACCAGGGCTTTCCC...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCATCATCTTGGGCTCTaGCCGCGCGGATCTGATGCA +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGHHLGL*PRGSDA
Trigger: TGCATCAGATCCGCGCGGCCAGAGCCCAAGATGATG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGGCTGCACAGAGCCACTaGCCAAGATGCGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PPPLSNVARFLGGRLGASAAQSH*PRCAPL
Trigger: AAGGGGAGCGCATCTTGGCCAGTGGCTCTGTGCAGC...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGCTTTGGGGTCCACACTaGCCAGGAGTACAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQLWGPH*PGVQSR
Trigger: CCTGGACTGTACTCCTGGCCAGTGTGGACCCCAAAG...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTGGTCGTGGAATTGGTaGCTTCCGCGTGCACATTGC +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGWSWNW*LPRAHC
Trigger: GCAATGTGCACGCGGAAGCCACCAATTCCACGACCA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCCAGCCAGCGGGAGATaGAGGTTTTCCCATCGTAGC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAPASGR*RFSHRS
Trigger: GCTACGATGGGAAAACCTCCATCTCCCGCTGGCTGG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGGTGCAGACACATTGGTaGGGCCGGAAGAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQVQTHW*GRKREL
Trigger: CAGTTCCCTCTTCCGGCCCCACCAATGTGTCTGCAC...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCGCACCAGCATGCTGCTaGAGGTGGTGGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLAPACC*RWWPVQ
Trigger: CTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGC...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTCCAGCACCTCCACAGTaGCGGTGTTGGCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISPAPPQ*RCWPWW
Trigger: CCACCACGGCCAACACCGCCACTGTGGAGGTGCTGG...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATCAGGTAGACAGACTCTaGCTTGAGGCCCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHQVDRL*LEARGC
Trigger: ACAGCCACGGGCCTCAAGCCAGAGTCTGTCTACCTG...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGGGTCTCTCTTCTCGGTaGTCACCACCAAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGGLSSR*SPPRPR
Trigger: CCGAGGCCTTGGTGGTGACCACCGAGAAGAGAGACC...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTCACGGAGAGGATGGTaGGTGCTTCATCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGSRRGW*VLHRGQ
Trigger: CTGCCCCCGATGAAGCACCCACCATCCTCTCCGTGA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCACGGAGGTGGTGGTGTaGGGCGTCACGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLTEVVV*GVTERM
Trigger: CATCCTCTCCGTGACGCCCCACACCACCACCTCCGT...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGTACGAGGTGCTGCTGTaGGCACTGCCTCCCCAACAA +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAYEVLL*ALPPQQ
Trigger: TTGTTGGGGAGGCAGTGCCCACAGCAGCACCTCGTA...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCGCTGGACCAGTGAATaGCGATGGCAGAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLARWTSE*RWQSCT
Trigger: GGTACAGCTCTGCCATCGCCATTCACTGGTCCAGCG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGGCGTACTTCTTGCTCTaGCCCCGGATGATGAGCACG +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQAYFLL*PRMMST
Trigger: CGTGCTCATCATCCGGGGCCAGAGCAAGAAGTACGC...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGCGTACTTCTTGCTCTaGCCCCGGATGATGAGCACG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQAYFLL*PRMMST
Trigger: CGTGCTCATCATCCGGGGCCAGAGCAAGAAGTACGC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCTAGGGCTCCAGACTTaGCACTGTTCCCCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLALGLQT*HCSPSL
Trigger: CAGACTCGGGGAACAGTGCCAAGTCTGGAGCCCTAG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCGAGTGGGCCTTCTGGTaGTTTGAGTCGACCTCGTAC +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGEWAFW*FESTSY
Trigger: GTACGAGGTCGACTCAAACCACCAGAAGGCCCACTC...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCGAGTGGGCCTTCTGGTaGTTTGAGTCGACCTCGTAC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASEWAFW*FESTSY
Trigger: GTACGAGGTCGACTCAAACCACCAGAAGGCCCACTC...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCGAGTCCGACTGGCCTTaGGCCGAAAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLESDWP*AERGCP
Trigger: AGGGCAGCCTCTTTCGGCCCAAGGCCAGTCGGACTC...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGATGAAAATCCTGCTATaGGAGCCCGGGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGMKILL*EPGSLG
Trigger: CCCCAGGCTCCCGGGCTCCCATAGCAGGATTTTCAT...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCTGGAAGGGGGCAGCTaGCTGGACATCCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGLEGGS*LDIQKL
Trigger: AAGCTTCTGGATGTCCAGCCAGCTGCCCCCTTCCAG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGTTGAGCAGGGGAGATaGGCAGTAGAGGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGVEQGR*AVEVAK
Trigger: CTTGGCAACCTCTACTGCCCATCTCCCCTGCTCAAC...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCGTGGGACTTTCACCATaGGCCCAGCCTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGVGLSP*AQPDLM
Trigger: CATGAGATCAGGCTGGGCCCATGGTGAAAGTCCCAC...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTCCACAGCTGCAGGCCTaGGCTTCCAGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISPQLQA*ASSCGW
Trigger: CCAGCCACAGCTGGAAGCCCAGGCCTGCAGCTGTGG...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTGTTGTGGAGCCACTTaGACTCCAGTGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGCCGAT*TPVASC
Trigger: GCAGCTGGCCACTGGAGTTCAAGTGGCTCCACAACA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGGTCAGGGGCCACCGTTaGCAGGATGACAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PPPLSNVARFLGGRLGASVRGHR*QDDKGV
Trigger: AACACCCTTGTCATCCTGTCAACGGTGGCCCCTGAC...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCCGTCCTTGTACCAGGTaGTGGAGGGCGGCGGCACAC +
Preference number: 4 (lower is better)
Translates to: FSLNPGIRKYQVDGKILARPCTR*WRAAAH
Trigger: GTGTGCCGCCGCCCTCCATCACCTGGTACAAGGACG...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGCAGCGTCCACTCGGTaGCTTTACTGCTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEAASTR*LYCCRP
Trigger: GGGTCTACAGCAGTAAAGTCACCGAGTGGACGCTGC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGTGTCCAGGATCTCACTaGAGCTCAGGTGTCCCACGG +
Preference number: 4 (lower is better)
Translates to: PPPLSNVARFLGGRLGASCPGSH*SSGVPR
Trigger: CCGTGGGACACCTGAGCTTCAGTGAGATCCTGGACA...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATCTTGCCATGCCCGTCTaGCCGGCTGTACTTGATCTT +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHLAMPV*PAVLDL
Trigger: AAGATCAAGTACAGCCGGTCAGACGGGCATGGCAAG...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGCTTGCCATGCCCGTCTaGCCGGCTGTACTTGATCTT +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQLAMPV*PAVLDL
Trigger: AAGATCAAGTACAGCCGGTCAGACGGGCATGGCAAG...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGTCAGCCTGTCCACAATaGAGCTGGAGGCATTGTGGC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLASACPQ*SWRHCG
Trigger: GCCACAATGCCTCCAGCTTCATTGTGGACAGGCTGA...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGGGAACTTGTAGGACGTaGAGGGCTTCAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQGTCRT*RASACP
Trigger: TGGACAGGCTGAAGCCCTTCACGTCCTACAAGTTCC...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGTCTCCGCTGGACCAGTaGATGGCGATGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWSPLDQ*MAMAEL
Trigger: CAGCTCTGCCATCGCCATTCACTGGTCCAGCGGAGA...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGGCAGAAAGAGTTCTTaGCGGAGAGCCGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGGRKSS*RRAACC
Trigger: ACAACAGGCGGCTCTCCGTCAAGAACTCTTTCTGCC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGAGAGTCGGAGATTTCTaGGGGCTTCTCCGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLARVGDF*GLLRQA
Trigger: AGCCTGACGGAGAAGCCCTCAGAAATCTCCGACTCT...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGAGAGTCGGAGATTTCTaGGGGCTTCTCCGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQRVGDF*GLLRQA
Trigger: AGCCTGACGGAGAAGCCCTCAGAAATCTCCGACTCT...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCAACTGGGTGCTAGGCTaGCTGAGCAAACTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGNWVLG*LSKLWV
Trigger: TACCCAGAGTTTGCTCAGTCAGCCTAGCACCCAGTT...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCGAAGCACTGGAACATaGCGGTATCATCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGRSTGT*RYHRAP
Trigger: TGGTGCCCGATGATACCGGCATGTTCCAGTGCTTCG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTTGGTGGCTTCCGCGTaGACATTGCCCGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISLVASA*TLPGGT
Trigger: GGTCCCTCCGGGCAATGTGCACGCGGAAGCCACCAA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTAGCGCACCAGCATGCTaGTGGAGGTGGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISSAPAC*WRWWPV
Trigger: CACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTCATCGGGGGCAGCCTaGAGGGTGGTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISSSGAA*RVVSDS
Trigger: GGAGTCACTGACCACCCTGCAGGCTGCCCCCGATGA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGTGTAGCCCTCCAGGATaGCATTGGGGAACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWCSPPG*HWGTAG
Trigger: CCCCGCAGTTCCCCAATGGCATCCTGGAGGGCTACA...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCTGTAGCCCTCCAGGATaGCATTGGGGAACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLCSPPG*HWGTAG
Trigger: CCCCGCAGTTCCCCAATGGCATCCTGGAGGGCTACA...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGCAGGCTGCTGCTCTCTaGAGGGATGAGGTCGTTGTA +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQQAAAL*RDEVVV
Trigger: TACAACGACCTCATCCCTGCAGAGAGCAGCAGCCTG...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATCAGGCTGCTGCTCTCTaGAGGGATGAGGTCGTTGTA +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHQAAAL*RDEVVV
Trigger: TACAACGACCTCATCCCTGCAGAGAGCAGCAGCCTG...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCTCGAGATGCCCTTCTaGTGTCGCCGCCACGAGTTG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLLEMPF*CRRHEL
Trigger: CAACTCGTGGCGGCGACAGCAGAAGGGCATCTCGAG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCGAAAGAGGCTGCCCTaGTGGGTGCTGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLRKRLP*WVLVLL
Trigger: CAACAGCACCAGCACCCAGCAGGGCAGCCTCTTTCG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGTGGCCTCCGGGATaGCCATTCTTTTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAAWPPG*PFFLQR
Trigger: TCTCTGCAAAAAGAATGGGCATCCCGGAGGCCACGC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGATGAGGCTGTCCGATaGCTGCCAGCCACAGTGATG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEDEAVR*LPATVM
Trigger: CATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTCTGTGCTTAGGAGGCTaGCGGGTGGCAGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTLCLGG*RVAVRG
Trigger: CCCTCTCACTGCCACCCGGCAGCCTCCTAAGCACAG...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGTGGTCCCATCTGACCTaGCCCTGCTGGGCGTGCAAT +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWWSHLT*PCWACN
Trigger: ATTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCA...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCGCAACACTGGGAGATTaGTTAGGGCACAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGATLGD*LGHKEA
Trigger: TGCCTCCTTGTGCCCTAAGCAATCTCCCAGTGTTGC...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATATTGCCATGTGCGCATaGCCATGGGTGTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHIAMCA*PWVSLD
Trigger: ATCCAGGGACACCCATGGGCATGCGCACATGGCAAT...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTGTGAGCCGGCGGTTGTaGTCACTGATGCCGCCCGAC +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFVSRRL*SLMPPD
Trigger: GTCGGGCGGCATCAGTGACCACAACCGCCGGCTCAC...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCAGCGGGGGCCGATGTTaGAAATGCCCAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLSGGRC*KCPGWW
Trigger: CCACCAACCTGGGCATTTCCAACATCGGCCCCCGCT...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGTTGAAGGCCTGGACCTaGACGCGGTACTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PPPLSNVARFLGGRLGASLKAWT*TRYSVH
Trigger: GTGGACAGAGTACCGCGTCCAGGTCCAGGCCTTCAA...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGTTGAAGGCCTGGACCTaGACGCGGTACTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKELKAWT*TRYSVH
Trigger: GTGGACAGAGTACCGCGTCCAGGTCCAGGCCTTCAA...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGATGGCGTTGAAGGCCTaGACCTGGACGCGGTACTCT +
Preference number: 4 (lower is better)
Translates to: PPPLSNVARFLGGRLGASMALKA*TWTRYS
Trigger: AGAGTACCGCGTCCAGGTCCAGGCCTTCAACGCCAT...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCCAGTGCAGACACATTaGTGGGGCCGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGPVQTH*WGRKRE
Trigger: TTCCCTCTTCCGGCCCCACCAATGTGTCTGCACTGG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGTGCTGCTGGAGGTGGTaGCCAGTGCAGACACATTGG +
Preference number: 4 (lower is better)
Translates to: PPPLSNVARFLGGRLGASCCWRW*PVQTHW
Trigger: CCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCA...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGTGCTGCTGGAGGTGGTaGCCAGTGCAGACACATTGG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKECCWRW*PVQTHW
Trigger: CCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCA...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCAGCCAGAATCGGGGCTaGGTGTCCGAGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLSQNRG*VSESFS
Trigger: GGAGAAGGACTCGGACACCCAGCCCCGATTCTGGCT...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGTCAGCCGCACAGACGTaGTCCGCACCTCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWSAAQT*SAPLGT
Trigger: TGTTCCCAGAGGTGCGGACCACGTCTGTGCGGCTGA...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCCCAGCACCTCCACAGTaGCGGTGTTGGCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FSLNPGIRKYQVDGKILAPAPPQ*RCWPWW
Trigger: CCACCACGGCCAACACCGCCACTGTGGAGGTGCTGG...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATAGTGCCCACCTGCCGCTaGGCAGCTCGCGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIVPTCR*AARGSG
Trigger: TCCAGACCCGCGAGCTGCCCAGCGGCAGGTGGGCAC...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGATTAGCACGGAGGTaGTGGTGTGGGGCGTCACGG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISGLARR*WCGASR
Trigger: CCGTGACGCCCCACACCACCACCTCCGTGCTAATCC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGAAGGGGTTGGCTTTCTaGGCTGGCACAGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEKGLAF*AGTDWE
Trigger: CTCCCAGTCTGTGCCAGCCCAGAAAGCCAACCCCTT...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGCCTCATAGAAGGGGTTaGCTTTCTGGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQPHRRG*LSGLAQ
Trigger: CTGTGCCAGCCCAGAAAGCCAACCCCTTCTATGAGG...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCTTGGTGACGGTGGTGTaGTCTGGCTCACCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLLVTVV*SGSPES
Trigger: CGACTCGGGTGAGCCAGACCACACCACCGTCACCAA...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCTGGCCCTGGAATCTCTaGAAAAATAAACTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSWPWNL*KNKLRR
Trigger: CCTCCTGAGTTTATTTTTCCAGAGATTCCAGGGCCA...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCACAGTGATGGTGCATaGAGGGAAGGAGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGHSDGA*REGGAE
Trigger: CTCTGCTCCTCCTTCCCTCCATGCACCATCACTGTG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGGGGGCTGTAGGAGAGTaGTCCAGGCTCTCTCTTACC +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGGAVGE*SRLSLT
Trigger: GGTAAGAGAGAGCCTGGACCACTCTCCTACAGCCCC...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGGAGAAACCGCTTTTTaGACACTGGAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQGETAF*TLELGW
Trigger: CCAGCCCAGCTCCAGTGTCCAAAAAGCGGTTTCTCC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGTGCCAGGTGTGTCCTaGTGTGAACCTGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHVPGVS*CEPALG
Trigger: ACCCAAAGCAGGTTCACACCAGGACACACCTGGCAC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGTTCAGATGTGCACTCTaGGAAGCTGAGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQFRCAL*EAEGSP
Trigger: GGGGCTTCCCTCAGCTTCCCAGAGTGCACATCTGAA...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCCTGTGCTCAGGTGGTaGTCAGGATTGCCATGTGCG +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGPVLRW*SGLPCA
Trigger: CGCACATGGCAATCCTGACCACCACCTGAGCACAGG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTCTCCCAGATGTACCTaGTGGTTACTCGGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGSPRCT*WLLGGR
Trigger: ACGACCCCCGAGTAACCATCAGGTACATCTGGGAGA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGTCTCGGTGTCTTTGCTaGACTGTCCTTTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGSRCLC*TVLSPR
Trigger: ACGTGGGGAAAGGACAGTTCAGCAAAGACACCGAGA...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGATCCGGTACCCTGTaGGGATGCCATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASRSGTL*GCHFSL
Trigger: GAGAGAAAAATGGCATCCTCACAGGGTACCGGATCT...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGTCAGCCTGTCCACAATaGAGCTGGAGGCATTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPPLSNVARFLGGRLGASSACPQ*SWRHCG
Trigger: GCCACAATGCCTCCAGCTTCATTGTGGACAGGCTGA...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGGAACTTGTAGGACGTaGAGGGCTTCAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEGTCRT*RASACP
Trigger: TGGACAGGCTGAAGCCCTTCACGTCCTACAAGTTCC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGGCCTTCTGGTGGTTTaGGTCGACCTCGTACTCGCT +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWGLLVV*VDLVLA
Trigger: AGCGAGTACGAGGTCGACTCAAACCACCAGAAGGCC...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATATGCTGGGCGGGATCTTaGGGCCGTCCCGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKICWAGS*GRPGTR
Trigger: CCTGGTTCCGGGACGGCCGCAAGATCCCGCCCAGCA...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCACGTCTGTGAGATGTaGAGGGAGCCGTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEHVCEM*REPFLS
Trigger: GGACAGAAACGGCTCCCTGCACATCTCACAGACGTG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTGGTCTCACTGGCTGTaGGCAGAGACACATTGGCTG +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGWSHWL*AETHWL
Trigger: CAGCCAATGTGTCTCTGCGCACAGCCAGTGAGACCA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCAGGACAGCAGCACGCTaGGTGCTCTCACATCCTCCT +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLRTAAR*VLSHPP
Trigger: AGGAGGATGTGAGAGCACGCAGCGTGCTGCTGTCCT...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATATTGATCTTGTCCTCTaGTGGCGGCTGCCATCGGAT +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHIDLVL*WRLPSD
Trigger: ATCCGATGGCAGCCGCCAGCAGAGGACAAGATCAAT...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCGAAGGAGGAGTTTGGTaGCATTTCTCTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSEGGVW*HFSFCF
Trigger: AAAGCAGAAAGAGAAATGGCACCAAACTCCTCCTTC...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCCTAATCATCCCACAGTaGCAAGGCCAGTCGCCTTAT +
Preference number: 4 (lower is better)
Translates to: TPQVQATQATCASQGRDGLIIPQ*QGQSPY
Trigger: ATAAGGCGACTGGCCTTGGCACTGTGGGATGATTAG...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCATCTGACCTGCCCCTaGTGGGCGTGCAATTCAAAT +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAHLTCP*WACNSN
Trigger: ATTTGAATTGCACGCCCAGCAGGGGCAGGTCAGATG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGGGCACAAGGAGGCAATaGCAAAGGTGCCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGGTRRQ*QRCQVC
Trigger: ACACACCTGGCACCTTTGGCATTGCCTCCTTGTGCC...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTGGAGCGGGTGGCGGCTaGTCAGATGGTCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFGAGGG*SDGLPF
Trigger: AAAGGGGAGACCATCTGAGCAGCCGCCACCCGCTCC...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCGGTGGTGGTCAGGATTaGCATGTGCGCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLGGGQD*HVRMPM
Trigger: CATGGGCATGCGCACATGGCAATCCTGACCACCACC...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGACAGCTGCTTCTCCGTaGGAGACGCTCTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWTAASP*ETLWCF
Trigger: GAAGCACCAGAGCGTCTCCCACGGAGAAGCAGCTGT...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTGTGGCTGGGGGAAGCTaGCGATGCGCGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHAVAGGS*RCAGHG
Trigger: TCCGTGCCCCGCGCATCGCCAGCTTCCCCCAGCCAC...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTTGGCTATGCGGCTGCTaGGCGGGATCTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGWLCGC*AGSCGR
Trigger: ACGGCCGCAAGATCCCGCCCAGCAGCCGCATAGCCA...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGTTACTCGGGGGTCGTaGGTCACTCCGCACACCATG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISVTRGS*VTPHTM
Trigger: CATGGTGTGCGGAGTGACCCACGACCCCCGAGTAAC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGTTGAGAATTCCATTCTaGTGGCTCTCAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGLRIPF*WLSGGG
Trigger: GCCGCCTCCTGAGAGCCACCAGAATGGAATTCTCAA...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTGGCCCTTTGAGGTCATaGCGGCCACCTCGATGGTGT +
Preference number: 4 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGGPLRS*RPPRWC
Trigger: ACACCATCGAGGTGGCCGCCATGACCTCAAAGGGCC...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTGGGCCCTGGGAGTTCTaGGGGCACCCCAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGGPWEF*GHPRGD
Trigger: ATCTCCTCTGGGGTGCCCCCAGAACTCCCAGGGCCC...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTAGCGGGGGCCGATGTTaGAAATGCCCAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISSGGRC*KCPGWW
Trigger: CCACCAACCTGGGCATTTCCAACATCGGCCCCCGCT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGTTTCCCATCGTAGCCTaGCCTGAACTGCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQFPIVA*PELQGH
Trigger: GTGACCTTGCAGTTCAGGCCAGGCTACGATGGGAAA...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCAGGATGCCCATGGGTaGTCCTGGGACATCATCCAG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLQDAHG*SWDIIQ
Trigger: CTGGATGATGTCCCAGGACCACCCATGGGCATCCTG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTGCACCATCGGCCTGCTaGGGGGCTGCGGACGGTCTC +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHAAPSAC*GAADGL
Trigger: GAGACCGTCCGCAGCCCCCCAGCAGGCCGATGGTGC...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACCGAGCTGGGAGCGCTaGGGGCTGCTTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIPSWER*GLLAGS
Trigger: AGACCCAGCAAGCAGCCCCCAGCGCTCCCAGCTCGG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGAAGGAGTGGGCCTTCTaGTGGTTTGAGTCGACCTCG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEKEWAF*WFESTS
Trigger: CGAGGTCGACTCAAACCACCAGAAGGCCCACTCCTT...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCTGGTTGACAAAGGAGTaGGCCTTCTGGTGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AGHPEAFSSLGHACLAASWLTKE*AFWWFE
Trigger: CTCAAACCACCAGAAGGCCCACTCCTTTGTCAACCA...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTGACGGTGGTGTGGTCTaGCTCACCCGAGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFDGGVV*LTRVAL
Trigger: GAGAGCGACTCGGGTGAGCCAGACCACACCACCGTC...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGATGAAAATCCTGCTATaGGAGCCCGGGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWMKILL*EPGSLG
Trigger: CCCCAGGCTCCCGGGCTCCCATAGCAGGATTTTCAT...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATATCGGCCACGCCTGCCTaGCGGCCTCCAGTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKISATPA*RPPVLS
Trigger: GCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGA...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGATGCTGGGTCCACTTTaGACTGAGCTTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGMLGPL*TELPDL
Trigger: CAGGTCAGGAAGCTCAGTCCAAAGTGGACCCAGCAT...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCTTTGGACACTGGAGCTaGGCTGGCCTGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLFGHWS*AGLSAE
Trigger: CTCAGCAGACAGGCCAGCCCAGCTCCAGTGTCCAAA...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTCGGAGGTGGCAGGGGTaGAGCAGGTGTCCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGRRWQG*SRCPAD
Trigger: GTCAGCTGGACACCTGCTCCACCCCTGCCACCTCCG...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAGCACAGGCGTGCATaGGCACCATCCCGCATGTAC +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWKHRRA*APSRMY
Trigger: GTACATGCGGGATGGTGCCCATGCACGCCTGTGCTT...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGCCCTGGCATCACTaGCACGGAAAATCACAGGCC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISGPWHH*HGKSQA
Trigger: GGCCTGTGATTTTCCGTGCCAGTGATGCCAGGGCCC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGGTTTGCAAACTCTCTaGAGCCCTAGGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGGLQTL*SPRRMV
Trigger: CACCATCCTCCTAGGGCTCCAGAGAGTTTGCAAACC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTATGTGCGCATGCCCATaGGTGTCCCTGGATAGGGCC +
Preference number: 4 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGMCACP*VSLDRA
Trigger: GGCCCTATCCAGGGACACCCATGGGCATGCGCACAT...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTACGTGGATGCTGTCTTaGAAGTTAGGCCGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISTWMLS*KLGRAV
Trigger: GACCGCCCGGCCTAACTTTCAAGACAGCATCCACGT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTCATCGTAGCCTGGCCTaGACTGCAAGGTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTHRSLA*TARSQS
Trigger: GCTCTGTGACCTTGCAGTTCAGGCCAGGCTACGATG...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGTCTGGTAAGCAAGAATaGTGCCATTGGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWSGKQE*CHWGRQ
Trigger: CTGCCGCCCCCAATGGCATCATTCTTGCTTACCAGA...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGTCAGGATGTCCATGCTaGACGTGTAGGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKESGCPC*TCRSSP
Trigger: AGGTGAGCTCCTACACGTTCAGCATGGACATCCTGA...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGCCACCATCTCAAAGCTaGAGAGCTGCTGGCCACACA +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWPPSQS*RAAGHT
Trigger: TGTGTGGCCAGCAGCTCTTCAGCTTTGAGATGGTGG...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTCTACTTGGGCTTCCTTaGACTCTGCTCACCCACCCC +
Preference number: 4 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGLLGLP*TLLTHP
Trigger: GGGGTGGGTGAGCAGAGTTCAAGGAAGCCCAAGTAG...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCAGGTGTGTCCTGGTGTaGACCTGCTTTGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLRCVLV*TCFGWS
Trigger: ACTCCACCCAAAGCAGGTTCACACCAGGACACACCT...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGAACTGGTAGGAGCGTaGAGGAACCAGGCCCTTGAC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISELVGA*RNQALD
Trigger: GTCAAGGGCCTGGTTCCTGCACGCTCCTACCAGTTC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGTTCTCTCCCGGCTCTTaGCAGCTGACCTTCAGCGAT +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWFSPGS*QLTFSD
Trigger: ATCGCTGAAGGTCAGCTGGCAAGAGCCGGGAGAGAA...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCTCACGGAGGCCGAGTaGAGTGCCCACCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCLTEAE*SAHLPL
Trigger: CAGCGGCAGGTGGGCACTGCACTCGGCCTCCGTGAG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGCGTGGCCTCCGGGATaGCCATTCTTTTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWAWPPG*PFFLQR
Trigger: TCTCTGCAAAAAGAATGGGCATCCCGGAGGCCACGC...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTGATGAGGCTGTCCGATaGCTGCCAGCCACAGTGATG +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTDEAVR*LPATVM
Trigger: CATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCGTGTCATTCTTATCTTaGCCACAATGCGTTAAACCT +
Preference number: 4 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSVSFLS*PQCVKP
Trigger: AGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCTTTGGGGAAGATTGTaGTTCCCTTCCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLLWGRL*FPSQAS
Trigger: GGAGGCCTGGGAAGGGAAGCACAATCTTCCCCAAAG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGTCCGATACCCCGTaGCTTAGTCCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISGSDTP*LSPRKQ
Trigger: CTGTTTCCTGGGACTAAGCCACGGGGTATCGGACCC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGAGCTCCCTGTTGTTGTaGAGCCACTTGAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQSSLLL*SHLNSS
Trigger: ACTGGAGTTCAAGTGGCTCCACAACAACAGGGAGCT...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGTGATGTTCTTAAACTaGTACCCCACGGGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWVMFLN*YPTGSP
Trigger: CGGGCTGCCCGTGGGGTACCAGTTTAAGAACATCAC...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTACTCCAGGGTCACGTTaGGCAGGTAGTGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTTPGSR*AGSGSH
Trigger: GTGTGACCCACTACCTGCCCAACGTGACCCTGGAGT...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGGCTCATTGGAGAGCTaGTGGATCAGCAACCACTCC +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWGSLES*WISNHS
Trigger: GGAGTGGTTGCTGATCCACCAGCTCTCCAATGAGCC...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTGGGCATCGGGCTCATTaGAGAGCTGGTGGATCAGCA +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTGHRAH*RAGGSA
Trigger: TGCTGATCCACCAGCTCTCCAATGAGCCCGATGCCC...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTCAGGTAGACAGACTCTaGCTTGAGGCCCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISQVDRL*LEARGC
Trigger: ACAGCCACGGGCCTCAAGCCAGAGTCTGTCTACCTG...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGTGTCGCCAATGTCATTaGTCGCCTTCACTCGGAACT +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGCRQCH*SPSLGT
Trigger: AGTTCCGAGTGAAGGCGACCAATGACATTGGCGACA...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTAGCCCATGTGGCCCCTaGGTTGTTGATGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISSPCGP*VVDASK
Trigger: CTTCGAGGCATCAACAACCCAGGGGCCACATGGGCT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTACGAGGTGCTGCTGTaGGCACTGCCTCCCCAACAA +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISYEVLL*ALPPQQ
Trigger: TTGTTGGGGAGGCAGTGCCCACAGCAGCACCTCGTA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTCCAGCTGTGTGGCCGTaGCGCCGTGGACGACCACGT +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHAPAVWP*RRGRPR
Trigger: ACGTGGTCGTCCACGGCGCCACGGCCACACAGCTGG...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGACCAGTGAATGGCGATaGCAGAGCTGTACCGCACGA +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWTSEWR*QSCTAR
Trigger: TCGTGCGGTACAGCTCTGCCATCGCCATTCACTGGT...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGTGGACGGGAAGATCCTaGCCACTGGATGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEWTGRS*PLDVAF
Trigger: AAAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCA...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCCCAGGCCTCCTTATTaGAGAAACCGCTTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAPRPPY*RNRFLD
Trigger: GTCCAAAAAGCGGTTTCTCCAATAAGGAGGCCTGGG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTCTGCCCAGGGAGGCGTaGGCAGCAACAGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGLPREA*AATEGL
Trigger: AAGGCCTTCTGTTGCTGCCCACGCCTCCCTGGGCAG...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTGCCATACAGAGGCACTaGGGAGCGGGTGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHAAIQRH*GAGGGC
Trigger: GCAGCCGCCACCCGCTCCCCAGTGCCTCTGTATGGC...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCTCTCCATCTCCGCAGTaGTGTGTCTTTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLSPSPQ*CVFLAP
Trigger: AGGAGCCAGAAAGACACATCACTGCGGAGATGGAGA...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTTTCGACCGCTGGCGATaGCGTTCTGTGGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCFDRWR*RSVEGP
Trigger: CGGCCCCTCCACAGAACGTCATCGCCAGCGGTCGAA...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTCTGGTAAGCAAGAATaGTGCCATTGGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISSGKQE*CHWGRQ
Trigger: CTGCCGCCCCCAATGGCATCATTCTTGCTTACCAGA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTGGCAGAAAGAGTTCTTaGCGGAGAGCCGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTGRKSS*RRAACC
Trigger: ACAACAGGCGGCTCTCCGTCAAGAACTCTTTCTGCC...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCGGCCTTCTGGTGGTTTaGGTCGACCTCGTACTCGCT +
Preference number: 4 (lower is better)
Translates to: FSLNPGIRKYQVDGKILAGLLVV*VDLVLA
Trigger: AGCGAGTACGAGGTCGACTCAAACCACCAGAAGGCC...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCTTTTCTCCCTCCTTCTaGACGCCGGCTTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FSLNPGIRKYQVDGKILAFSPSF*TPALLA
Trigger: GGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAA...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTTCCCAAGGGAGCAGTaGACCCCACCATCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISFPREQ*TPPSQS
Trigger: GCTTTGAGATGGTGGGGTTCACTGCTCCCTTGGGAA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATATTGCACCTCGCCGGCTaGATTGCGGGCGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKILHLAG*IAGEAL
Trigger: CAGTGCTTCGCCCGCAATGCAGCCGGCGAGGTGCAA...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTCCCGGCAGGTGTACGTaGCGATGTCTCCCGACCACG +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHAPGRCT*RCLPTT
Trigger: CGTGGTCGGGAGACATCGGCACGTACACCTGCCGGG...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCATGGGTGCGCACCAGCTaGGGGGTGCTGCGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPWVRTS*GVLRGP
Trigger: CGGGCCACGCAGCACCCCGCAGCTGGTGCGCACCCA...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTGCACATCCTCATGGGTaGGCACCAGCTGCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCAHPHG*APAAGC
Trigger: GCACCCCGCAGCTGGTGCGCACCCATGAGGATGTGC...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTTTCTCTCCCGGCTCTTaGCAGCTGACCTTCAGCGAT +
Preference number: 4 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGFSPGS*QLTFSD
Trigger: ATCGCTGAAGGTCAGCTGGCAAGAGCCGGGAGAGAA...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGATGTCAGGGGGTGCCTaGAGGGTCTGGATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWMSGGA*RVWIFL
Trigger: TAGAAAGATCCAGACCCTGCAGGCACCCCCTGACAT...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTGGTCTCACTGGCTGTaGGCAGAGACACATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISWSHWL*AETHWL
Trigger: CAGCCAATGTGTCTCTGCGCACAGCCAGTGAGACCA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATATTGTCCAGCTCGTACTaGGTGAGGCTGGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKILSSSY*VRLGRL
Trigger: GAGCCGGCCCAGCCTCACGCAGTACGAGCTGGACAA...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGGCGTGCAATTCAAATaGTGGGTCCACTTTGGACTG +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEGVQFK*WVHFGL
Trigger: CAGTCCAAAGTGGACCCAGCATTTGAATTGCACGCC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTTGCCCCTGCTGGGCGTaGAATTCAAATGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFCPCWA*NSNAGS
Trigger: GGACCCAGCATTTGAATTGCACGCCCAGCAGGGGCA...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGTTCCCAGGGGTCAAGTaGTTCAGGAAAAACTCATGG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQFPGVK*FRKNSW
Trigger: CCATGAGTTTTTCCTGAAGCACTTGACCCCTGGGAA...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTAGGCAATGCCAAAGGTaGCAGGTGTGTCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISRQCQR*QVCPGV
Trigger: CACACCAGGACACACCTGGCACCTTTGGCATTGCCT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTGAGGCAGCCTGGGTTTaGAAACTCTCTGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTEAAWV*KLSGAL
Trigger: TAGGGCTCCAGAGAGTTTGCAAACCCAGGCTGCCTC...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTGAACCAGGTCACCTGTaGCTGGGGGAAGCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGEPGHL*LGEAGD
Trigger: ATCGCCAGCTTCCCCCAGCCACAGGTGACCTGGTTC...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGATGGTCGTGGAATTaGTGGCTTCCGCGTGCACAT +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISGWSWN*WLPRAH
Trigger: ATGTGCACGCGGAAGCCACCAATTCCACGACCATCC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAACAGGATGCCCATaGGTGGTCCTGGGACATCAT +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISGTGCP*VVLGHH
Trigger: ATGATGTCCCAGGACCACCCATGGGCATCCTGTTCC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTACCAGTGAATGGCGATaGCAGAGCTGTACCGCACGA +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISTSEWR*QSCTAR
Trigger: TCGTGCGGTACAGCTCTGCCATCGCCATTCACTGGT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTCTCATCATCTCGCTGTaGCCTAGGGCTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISLIISL*PRAPDL
Trigger: CAAGTCTGGAGCCCTAGGCCACAGCGAGATGATGAG...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTGGCCCTGGAATCTCTaGAAAAATAAACTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGWPWNL*KNKLRR
Trigger: CCTCCTGAGTTTATTTTTCCAGAGATTCCAGGGCCA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGAACGCCGGCTTTGCTaGCCCTGGAATCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISERRLC*PWNLWK
Trigger: TTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTC...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCAAGCTGAAGAGCTGCTaGCCACACACATCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLKLKSC*PHTSSH
Trigger: GTGAGAGGATGTGTGTGGCCAGCAGCTCTTCAGCTT...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCAGGACGGATGGAACCTaGATTGGAAGAAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGRTDGT*IGRKRT
Trigger: TGTTCTCTTTCTTCCAATCCAGGTTCCATCCGTCCT...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGAAGATCCTGGCCACTaGATGTGGCTTTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGEDPGH*MWLFAE
Trigger: TTCTGCAAAAAGCCACATCCAGTGGCCAGGATCTTC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCAGAACCTCAGCCCTTaGTTCTCCTTTGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGQNLSP*FSFGED
Trigger: ATCTTCCCCAAAGGAGAACCAAGGGCTGAGGTTCTG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTGCCTTTCCACGGTGCTaGGAGTGGCCACTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCAFPRC*EWPLGA
Trigger: AGCACCCAGTGGCCACTCTCAGCACCGTGGAAAGGC...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAGATCCGGTACCCTGTaGGGATGCCATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWRSGTL*GCHFSL
Trigger: GAGAGAAAAATGGCATCCTCACAGGGTACCGGATCT...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGGTCGTTGTATTTGGTaGCATCCTCATCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEGRCIW*HPHPSS
Trigger: ACTACTCGGATGAGGATGTCACCAAATACAACGACC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTTCGGTTCCGCACGATaGAACGGTAAAAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISFGSAR*NGKSQR
Trigger: ACGCTGGCTTTTACCGTTGCATCGTGCGGAACCGAA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCAACAGAGGGGACGCTaGTGCTGCGCAGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCQQRGR*CCAGQP
Trigger: AGGCTGTCCTGCGCAGCAGCAGCGTCCCCTCTGTTG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCCTCGCCGGCTGCATTaGGGGCGAAGCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCPRRLH*GRSTGT
Trigger: TGTTCCAGTGCTTCGCCCGCAATGCAGCCGGCGAGG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTTGCCATCGATCACCGTaGTGTCCAGGGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHACHRSP*CPGGLW
Trigger: CCAGAGGCCCCCTGGACAGCACGGTGATCGATGGCA...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTATGTCAGGGGGTGCCTaGAGGGTCTGGATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISMSGGA*RVWIFL
Trigger: TAGAAAGATCCAGACCCTGCAGGCACCCCCTGACAT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTAGCGCACCAGCATGCTaGTGGAGGTGGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHASAPAC*WRWWPV
Trigger: CACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCT...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATCCAGCACGAGCCCGTTaGGATCAGCCTCGGGGACCT +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDPARAR*DQPRGP
Trigger: AGGTCCCCGAGGCTGATCGCAACGGGCTCGTGCTGG...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTATTGATCTTGTCCTCTaGTGGCGGCTGCCATCGGAT +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISIDLVL*WRLPSD
Trigger: ATCCGATGGCAGCCGCCAGCAGAGGACAAGATCAAT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTATCTCGTACCGCCTGTaGTTGTTCAGGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISISYRL*LFRLSS
Trigger: GCTGGACAACCTGAACAAGCACAGGCGGTACGAGAT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGCCTTATTTACACCTCTaGTCCCCAGACTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQPYLHL*SPDFTF
Trigger: AAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGG...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTGCATGGGCTCCTGGGTaGAACACTGGGAGATTGCTT +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFAWAPG*NTGRLL
Trigger: AAGCAATCTCCCAGTGTTGCACCCAGGAGCCCATGC...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATCTGCCAAGTGATAGCTaGTCGGGGCGCCCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDLPSDS*SGRPRG
Trigger: ACCTCGGGGGCGCCCCGACCAGCTATCACTTGGCAG...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTCAGGATGCCCATGGGTaGTCCTGGGACATCATCCAG +
Preference number: 4 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGQDAHG*SWDIIQ
Trigger: CTGGATGATGTCCCAGGACCACCCATGGGCATCCTG...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTGGAACAGGATGCCCATaGGTGGTCCTGGGACATCAT +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFGTGCP*VVLGHH
Trigger: ATGATGTCCCAGGACCACCCATGGGCATCCTGTTCC...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATTCACGTCCAGCTGTGTaGCCGTGGCGCCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDSRPAV*PWRRGR
Trigger: TCGTCCACGGCGCCACGGCCACACAGCTGGACGTGA...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTCCTCATAGAAGGGGTTaGCTTTCTGGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFPHRRG*LSGLAQ
Trigger: CTGTGCCAGCCCAGAAAGCCAACCCCTTCTATGAGG...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCTGGTTGACAAAGGAGTaGGCCTTCTGGTGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLWLTKE*AFWWFE
Trigger: CTCAAACCACCAGAAGGCCCACTCCTTTGTCAACCA...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGGTGAAGGAGGAGTTTaGTGCCATTTCTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEGEGGV*CHFSFC
Trigger: GCAGAAAGAGAAATGGCACCAAACTCCTCCTTCACC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTTCGGCCACGCCTGCCTaGCGGCCTCCAGTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLSATPA*RPPVLS
Trigger: GCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGA...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGTTCCTTGTAAGTGCATaGGAGATGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGFLVSA*EMCVCV
Trigger: CACACACACACACATCTCCCATGCACTTACAAGGAA...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTCCTGGAAGCTGTTACTaGGGGTTAGGGTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISPGSCY*GLGCLC
Trigger: GCAAAGACACCCTAACCCCCAGTAACAGCTTCCAGG...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGTTCAGGAAAAACTCATaGCTGGGTGTGCCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEFRKNS*LGVPVL
Trigger: AAGAACGGGCACACCCAGCCATGAGTTTTTCCTGAA...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGCCCTTGGTTCTCCTTTaGGGAAGATTGTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWPLVLL*GRLCFP
Trigger: AGGGAAGCACAATCTTCCCCAAAGGAGAACCAAGGG...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGTTGTCTAAATTTGCGTaGTGTCCTCACCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: PTPTEHHLLGRASSACTQLSKFA*CPHPLR
Trigger: TCTGAGAGGGTGAGGACACCACGCAAATTTAGACAA...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACACAGGCAGGGGCCCTaGCATCACTGGCACGGAAAA +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIHRQGP*HHWHGK
Trigger: TTTTCCGTGCCAGTGATGCCAGGGCCCCTGCCTGTG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTTCTTCACTCGCTCTGTaGGGTTCCCCCGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCSSLAL*GSPAGL
Trigger: AAGCCCAGCGGGGGAACCTCACAGAGCGAGTGAAGA...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTTCTCCGCTGGACCAGTaGATGGCGATGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHASPLDQ*MAMAEL
Trigger: CAGCTCTGCCATCGCCATTCACTGGTCCAGCGGAGA...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATCAAAGAGACGTGTCCTaGAAAAATCTAGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHQRDVS*KNLEFH
Trigger: GTGGAACTCTAGATTTTTTCAGGACACGTCTCTTTG...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACTCTCAGGAGGCGGCTaGCACTGGATCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKILSGGG*HWIMMD
Trigger: GTCCATCATGATCCAGTGGCAGCCGCCTCCTGAGAG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATAAGGACAGCAGCACGCTaGGTGCTCTCACATCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIRTAAR*VLSHPP
Trigger: AGGAGGATGTGAGAGCACGCAGCGTGCTGCTGTCCT...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGGGGTTAGGGTGTCTTTaGCTTTTTGCCTGTAAACTG +
Preference number: 4 (lower is better)
Translates to: PPPLSNVARFLGGRLGASGLGCL*LFACKL
Trigger: CAGTTTACAGGCAAAAAGGCAAAGACACCCTAACCC...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTGCACAGAGGGAGCCCTaGTCCACGAAGGGGCTCACG +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLAQREP*STKGLT
Trigger: CGTGAGCCCCTTCGTGGAGCAGGGCTCCCTCTGTGC...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGTTTTTACTCACTCCTaGTTCCTCCCAAATAATCCC +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQVFTHS*FLPNNP
Trigger: GGGATTATTTGGGAGGAAGCAGGAGTGAGTAAAAAC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGATTCCAGGGAGAACTTaGTCAGCTCCCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWIPGRT*SAPCCC
Trigger: ACAACAACAGGGAGCTGACCAAGTTCTCCCTGGAAT...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTTGGATCATGATGGACTaGTTGGTTCGACCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGWIMMD*LVRPLA
Trigger: CGCCAGCGGTCGAACCAACCAGTCCATCATGATCCA...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTCATTGGAGAGCTGGTaGATCAGCAACCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISSLESW*ISNHSS
Trigger: AGAGGAGTGGTTGCTGATCCACCAGCTCTCCAATGA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTTGCGCAGAGACACATTaGCTGGGGCCATGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCCAETH*LGPCQG
Trigger: CCCCTGACATGGCCCCAGCCAATGTGTCTCTGCGCA...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTCAGCCCTTGCGGGTCTaGGCCGTGATGCGGAACAGG +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLQPLRV*AVMRNR
Trigger: CCTGTTCCGCATCACGGCCCAGACCCGCAAGGGCTG...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTTGTCGCCAATGTCATTaGTCGCCTTCACTCGGAACT +
Preference number: 4 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGCRQCH*SPSLGT
Trigger: AGTTCCGAGTGAAGGCGACCAATGACATTGGCGACA...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATATGGATGTCTCCATTCTaGCTGTCCAGCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIWMSPF*LSSGGG
Trigger: GCCACCTCCGCTGGACAGCCAGAATGGAGACATCCA...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTAAGCTGAAGAGCTGCTaGCCACACACATCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFKLKSC*PHTSSH
Trigger: GTGAGAGGATGTGTGTGGCCAGCAGCTCTTCAGCTT...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTGGAAAAACTCATGGCTaGGTGTGCCCGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFGKTHG*VCPFFG
Trigger: CCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCC...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTGCCCATGGGTGTCCCTaGATAGGGCCATACAGAGGC +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCAHGCP*IGPYRG
Trigger: GCCTCTGTATGGCCCTATCCAGGGACACCCATGGGC...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGTTTCTGGAGTCTAGATaGATGGAGAAAGGTAACACG +
Preference number: 4 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQFLESR*MEKGNT
Trigger: CGTGTTACCTTTCTCCATCCATCTAGACTCCAGAAA...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 72 bp GTAAAAGCATTCCCTCCCATCAGCTATTCTTGTCACTaGGTCCCATCTGACCTGCCCCTGCTGGGCGTGCAA +
Preference number: 4 (lower is better)
Translates to: VKAFPPISYSCH*VPSDLPLLGVQ
Trigger: TTGCACGCCCAGCAGGGGCAGGTCAGATGGGACCAAGTGACAAGAATAGCTGATGGGAGGGAATGCTTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 72 bp GGGGCTGTAGGAGAGTGGTCCAGGCTCTCTCTTACCTaGGCATGTTTCCCAAATCTCCTACTTGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GAVGEWSRLSLT*ACFPNLLLGLP
Trigger: AGGAAGCCCAAGTAGGAGATTTGGGAAACATGCCAAGGTAAGAGAGAGCCTGGACCACTCTCCTACAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 72 bp TGGGGAAGATTGTGCTTCCCTTCCCAGGCCTCCTTATaGGAGAAACCGCTTTTTGGACACTGGAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WGRLCFPSQASL*EKPLFGHWSWA
Trigger: AGCCCAGCTCCAGTGTCCAAAAAGCGGTTTCTCCAATAAGGAGGCCTGGGAAGGGAAGCACAATCTTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTGGCACACCTTTGGCCTaGCAGGGGATGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLGTPLA*QGMSTT
Trigger: GGTGGTGGACATCCCCTGTCAGGCCAAAGGTGTGCC...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCCAGGAGGATGCCATTaGTCTTGTCCTCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCPGGCH*SCPLLA
Trigger: CGCCAGCAGAGGACAAGATCAATGGCATCCTCCTGG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCACCTCCACCACGGCTaGGTCCTTGTACCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCHLHHG*VLVPGD
Trigger: ATCACCTGGTACAAGGACGCAGCCGTGGTGGAGGTG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTGGATCAGGGGGCTGTTaGCATCAAAGGGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHAGSGGC*HQRAWS
Trigger: GGACCAAGCCCTTTGATGGCAACAGCCCCCTGATCC...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACACTGCGAGACGAGTTaGCTTCCACCAGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIHCETS*LPPARI
Trigger: GATTCTGGCTGGTGGAAGGCAACTCGTCTCGCAGTG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR GCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGCTCCATCCACGGGGCTaGAGGGCTCGTACACCAGCC +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRLHPRG*RARTPA
Trigger: GGCTGGTGTACGAGCCCTGCAGCCCCGTGGATGGAG...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTCCTGTTCCTTGTAAGTaGATGGGAGATGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTPVPCK*MGDVCV
Trigger: CACACACACATCTCCCATGCACTTACAAGGAACAGG...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATATTGCGGGCGAAGCACTaGAACATGCCGGTATCATCG +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKILRAKH*NMPVSS
Trigger: CGATGATACCGGCATGTTCCAGTGCTTCGCCCGCAA...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTTCATTGGAGAGCTGGTaGATCAGCAACCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFSLESW*ISNHSS
Trigger: AGAGGAGTGGTTGCTGATCCACCAGCTCTCCAATGA...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTCGTGGTCCGCACCTCTaGGAACAGGATGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLRGPHL*EQDAHG
Trigger: CCCATGGGCATCCTGTTCCCAGAGGTGCGGACCACG...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCATGTACTGCCGGGCGCTaGGTGCCAGCACCTCCACAG +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPCTAGR*VPAPPQ
Trigger: CTGTGGAGGTGCTGGCACCCAGCGCCCGGCAGTACA...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATTTAGCACGGAGGTGGTaGTGTGGGGCGTCACGGAGA +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDLARRW*CGASRR
Trigger: TCTCCGTGACGCCCCACACCACCACCTCCGTGCTAA...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTTGGATGTCTCCATTCTaGCTGTCCAGCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCWMSPF*LSSGGG
Trigger: GCCACCTCCGCTGGACAGCCAGAATGGAGACATCCA...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTGAGTCCGACTGGCCTTaGGCCGAAAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLESDWP*AERGCP
Trigger: AGGGCAGCCTCTTTCGGCCCAAGGCCAGTCGGACTC...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTTTTCTCCCCTACCCTTaGGCTCTCTTCCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: GIRKYQVDGKILATGCGFFLPYP*ALFLGF
Trigger: GAATCCAAGGAAGAGAGCCCAAGGGTAGGGGAGAAA...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTTGCAGAACACTCCTTaGAGCAGATTGTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGLQNTP*SRLCMC
Trigger: ACACATACACAATCTGCTCCAAGGAGTGTTCTGCAA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 72 bp CATGGGCCCAGCCTGATCTCATGGGCTTGTCTAAATTaGCGTGGTGTCCTCACCCTCTCAGACAATAGATCC +
Preference number: 4 (lower is better)
Translates to: HGPSLISWACLN*RGVLTLSDNRS
Trigger: GGATCTATTGTCTGAGAGGGTGAGGACACCACGCAAATTTAGACAAGCCCATGAGATCAGGCTGGGCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTGTCGTTGCCTCCTGCTaGGATCACCCGGCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLVVASC*DHPAGV
Trigger: TACACCTGCCGGGTGATCTCAGCAGGAGGCAACGAC...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATACGTGGATGCTGTCTTaGAAGTTAGGCCGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDTWMLS*KLGRAV
Trigger: GACCGCCCGGCCTAACTTTCAAGACAGCATCCACGT...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTGCTTTTGGTTATTCTaGTGGAAACAAAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGCFWLF*WKQREG
Trigger: CCCTTCTCTTTGTTTCCATCAGAATAACCAAAAGCA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTATGCGCTCCCCTTTCTaGCAAGTGATAGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHAMRSPF*QVIAGR
Trigger: CCGACCAGCTATCACTTGGCAGAAAGGGGAGCGCAT...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGCTGCCATGGAGATaGCAGATGCTGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDVLPWR*QMLQRV
Trigger: CACCCTCTGCAGCATCTGGCATCTCCATGGCAGCAC...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTAGTGATGTGTCTTTCTaGCTCCTTGACAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGSDVSF*LLDKLR
Trigger: CCTCAGTTTGTCAAGGAGCCAGAAAGACACATCACT...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTAGAATTCCATTCTGGTaGCTCTCAGGAGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHARIPFW*LSGGGC
Trigger: GCAGCCGCCTCCTGAGAGCCACCAGAATGGAATTCT...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGCGGACACTTGGCCCTaGCCCTTTGAGGTCATGGCG +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPADTWP*PFEVMA
Trigger: CGCCATGACCTCAAAGGGCCAGGGCCAAGTGTCCGC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATATTTCCCATCGTAGCCTaGCCTGAACTGCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIFPIVA*PELQGH
Trigger: GTGACCTTGCAGTTCAGGCCAGGCTACGATGGGAAA...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATCCAGCCAGCGGGAGATaGAGGTTTTCCCATCGTAGC +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDPASGR*RFSHRS
Trigger: GCTACGATGGGAAAACCTCCATCTCCCGCTGGCTGG...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATAAGGGGTTGGCTTTCTaGGCTGGCACAGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDKGLAF*AGTDWE
Trigger: CTCCCAGTCTGTGCCAGCCCAGAAAGCCAACCCCTT...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACCGAGTCTGTCTTCTTaGCGTACTTCTTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIPSLSS*RTSCSG
Trigger: GCCAGAGCAAGAAGTACGCCAAGAAGACAGACTCGG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTGAACGCCGGCTTTGCTaGCCCTGGAATCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCERRLC*PWNLWK
Trigger: TTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTC...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTTGGCGGCTGCTCAGATaGTCTCCCCTTTACCTTCCT +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCWRLLR*SPLYLP
Trigger: AGGAAGGTAAAGGGGAGACCATCTGAGCAGCCGCCA...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTGCACCTGTGCTCAGGTaGTGGTCAGGATTGCCATGT +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHAAPVLR*WSGLPC
Trigger: ACATGGCAATCCTGACCACCACCTGAGCACAGGTGC...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTGCCCTTGACTGTCACTaGGGTAGCTTTGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLALDCH*GSFGVH
Trigger: GTGGACCCCAAAGCTACCTCAGTGACAGTCAAGGGC...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGAATAAACTCAGGAGGTaGAAAGTTGACTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: DEAVRCLPATVMVHGGKENKLRR*KVDLVS
Trigger: AGAAACCAAGTCAACTTTTCACCTCCTGAGTTTATT...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGAGCAACAGAAGGCCTTaGGGCAGCGTGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRSNRRP*GSVHQV
Trigger: CACCTGGTGCACGCTGCCTCAAGGCCTTCTGTTGCT...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTAAAATACTGACAGTTTaGCAGGACACGGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGKILTV*QDTGLL
Trigger: AAGAAGTCCCGTGTCCTGTCAAACTGTCAGTATTTT...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGATGATGATGGTGGGTaGGATGGGGTCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPDDDGG*DGVCRP
Trigger: GGGCCTGCAGACCCCATCGCACCCACCATCATCATC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGGCAGGCCCCCGTCGTTaGGCTGCCGGAAGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQAGPRR*AAGSGS
Trigger: TGACCCGCTTCCGGCAGCGCAACGACGGGGGCCTGC...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCACTCAGCGTCTTGCCATaGCCGTCTGACCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPLSVLP*PSDRLY
Trigger: GTACAGCCGGTCAGACGGGCATGGCAAGACGCTGAG...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGAACCCAGGCCACCTGTaGCTCACAGGGGAGAGATGG +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRNPGHL*LTGERW
Trigger: CCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTT...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTGTGAGCGTGATGGGCTaGCTGGTCTTGTTATCCCCG +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLVSVMG*LVLLSP
Trigger: CGGGGATAACAAGACCAGCCAGCCCATCACGCTCAC...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATGCTGAGAGTGGCCACTaGGTGCTCGGGCGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNAESGH*VLGRVG
Trigger: CCCCACGCGCCCGAGCACCCAGTGGCCACTCTCAGC...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTAGCCCATGTGGCCCCTaGGTTGTTGATGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLSPCGP*VVDASK
Trigger: CTTCGAGGCATCAACAACCCAGGGGCCACATGGGCT...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTCTGGAAGGGGGCAGCTaGCTGGACATCCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLLEGGS*LDIQKL
Trigger: AAGCTTCTGGATGTCCAGCCAGCTGCCCCCTTCCAG...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATCTGACCTGCCCCTGCTaGGCGTGCAATTCAAATGCT +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDLTCPC*ACNSNA
Trigger: AGCATTTGAATTGCACGCCCAGCAGGGGCAGGTCAG...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCACAGAGCATCATCTCTTaGGCAGGGCCAGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPQSIIS*AGPAAP
Trigger: AGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTG...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTATGTGGCCAGGTTTCTaGGAGGACGGTTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLMWPGF*EDGWEP
Trigger: AGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACAT...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 72 bp CTTGGCATGTTTCCCAAATCTCCTACTTGGGCTTCCTaGAACTCTGCTCACCCACCCCAACAGAGCATCATC +
Preference number: 4 (lower is better)
Translates to: LGMFPKSPTWAS*NSAHPPQQSII
Trigger: GATGATGCTCTGTTGGGGTGGGTGAGCAGAGTTCAAGGAAGCCCAAGTAGGAGATTTGGGAAACATGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGACTCCGACTCCTCGCTaGACTCGCTGTCGCCAATGT +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRTPTPR*TRCRQC
Trigger: ACATTGGCGACAGCGAGTTCAGCGAGGAGTCGGAGT...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAATAAACTCAGGAGGTaGAAAGTTGACTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWNKLRR*KVDLVS
Trigger: AGAAACCAAGTCAACTTTTCACCTCCTGAGTTTATT...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR TCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGCTATCCAGTGGAGAGTaGCGTGTCTGCCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRLSSGE*RVCPEG
Trigger: TCCCTCTGGGCAGACACGTCACTCTCCACTGGATAG...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGAGCCACTGGCCAAGATaGGCTCCCCTTTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRSHWPR*APLSAK
Trigger: CTTGGCAGAAAGGGGAGCGCATCTTGGCCAGTGGCT...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGATGCCATTGGGGAACTaGGGGGCTTCCCAGGACACA +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRMPLGN*GASQDT
Trigger: TGTGTCCTGGGAAGCCCCGCAGTTCCCCAATGGCAT...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCATCTGAACGCCGGCTTTaGTGGCCCTGGAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPSERRL*WPWNLW
Trigger: CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGA...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTCAGCTGCAGATGTGCTaGCATGGAGATGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLQLQMC*HGDARC
Trigger: GCATCTGGCATCTCCATGGCAGCACATCTGCAGCTG...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGGGAGGCGGCTGCCACTaGATCATGATGGACTGGTTG +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRGGGCH*IMMDWL
Trigger: CAACCAGTCCATCATGATCCAGTGGCAGCCGCCTCC...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCACTAGGGCTCCAGACTTaGCACTGTTCCCCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPLGLQT*HCSPSL
Trigger: CAGACTCGGGGAACAGTGCCAAGTCTGGAGCCCTAG...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATAGTGCAATTCAAATGCTaGGTCCACTTTGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIVQFKC*VHFGLS
Trigger: GCTCAGTCCAAAGTGGACCCAGCATTTGAATTGCAC...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGCTATTCTTGTCACTTaGTCCCATCTGACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDAILVT*SHLTCP
Trigger: GGGGCAGGTCAGATGGGACCAAGTGACAAGAATAGC...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACCCAGCCTGATCTCATaGGCTTGTCTAAATTTGCGT +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIPSLIS*ACLNLR
Trigger: ACGCAAATTTAGACAAGCCCATGAGATCAGGCTGGG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGGTGTGAACCTGCTTTaGGTGGAGTCCCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPGVNLL*VESHRQ
Trigger: CTGCCTGTGGGACTCCACCCAAAGCAGGTTCACACC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGCCACCATCTCAAAGCTaGAGAGCTGCTGGCCACACA +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRPPSQS*RAAGHT
Trigger: TGTGTGGCCAGCAGCTCTTCAGCTTTGAGATGGTGG...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATTGTGTGTGTGTGTGGTaGGGATCTATCCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDCVCVW*GSIQWR
Trigger: TCTCCACTGGATAGATCCTCACCACACACACACACA...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTCTAGGAGGGCCCAGATaGGTTTGTTCTGGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLLGGPR*VCSGED
Trigger: ATCCTCTCCAGAACAAACTCATCTGGGCCCTCCTAG...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATTGGGCCGAAAGAGGCTaGCCTGCTGGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNWAERG*PAGCWC
Trigger: GCACCAGCACCCAGCAGGGCAGCCTCTTTCGGCCCA...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTGAAGGAGGAGTTTGGTaGCATTTCTCTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGEGGVW*HFSFCF
Trigger: AAAGCAGAAAGAGAAATGGCACCAAACTCCTCCTTC...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGGCTTCCTTGAACTCTaGTCACCCACCCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPGFLEL*SPTPTE
Trigger: CTCTGTTGGGGTGGGTGAGCAGAGTTCAAGGAAGCC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGGGTCACACGGGTGTTaGTTCGATTGTACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPGSHGC*FDCTPP
Trigger: GGGAGGAGTACAATCGAACCAACACCCGTGTGACCC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACGGCTTTGCTGGCCCTaGAATCTCTGGAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIRLCWP*NLWKNK
Trigger: TTTATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGTTGAGCAGGGGAGATaGGCAGTAGAGGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPVEQGR*AVEVAK
Trigger: CTTGGCAACCTCTACTGCCCATCTCCCCTGCTCAAC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 72 bp CCTGGCCACTGGATGTGGCTTTTTGCAGAACACTCCTaGGAGCAGATTGTGTATGTGTATGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGHWMWLFAEHS*EQIVYVYVCVC
Trigger: ACACACACACACATACACATACACAATCTGCTCCAAGGAGTGTTCTGCAAAAAGCCACATCCAGTGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTTGCGGTCCAGGCTGGTaGTCATGTATCTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLCGPGW*SCICIP
Trigger: TGGAATACAGATACATGATCACCAGCCTGGACCGCA...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGTCAGGATGTCCATGCTaGACGTGTAGGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRSGCPC*TCRSSP
Trigger: AGGTGAGCTCCTACACGTTCAGCATGGACATCCTGA...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGTGGGAGACGCTCTGGTaGTTCTCACCTTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRWETLW*FSPSSK
Trigger: CTTTGAGGAAGGTGAGAAGCACCAGAGCGTCTCCCA...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCACTAGCACCACTGACATaGCATCGATCACCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPLAPLT*HRSPCC
Trigger: ACAGCACGGTGATCGATGGCATGTCAGTGGTGCTAG...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCACCAGGGCAGGGAAGCTaGTTTCATCCAAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPPGQGS*FHPSSS
Trigger: TGATGAGCTTGGATGAAAGCAGCTTCCCTGCCCTGG...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGAAGAAAAGAAAGCTGTaGGGCACGATCACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRKKRKL*GTITGR
Trigger: CCGGCCTGTGATCGTGCCGCACAGCTTTCTTTTCTT...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGTTCTGGGAGGACGGTTaGGAGCCTCGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQFWEDG*EPRLCQ
Trigger: CTGGCACAGCCGAGGCTCCCAACCGTCCTCCCAGAA...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCACACCCCTTTCTAATGTaGCCAGGTTTCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPHPFLM*PGFWED
Trigger: GTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTG...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATGGCGGTTGTGGTCACTaGTGCCGCCCGACAGCAATA +
Preference number: 4 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNGGCGH*CRPTAI
Trigger: TATTGCTGTCGGGCGGCATCAGTGACCACAACCGCC...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTGGTCGTTGTATTTGGTaGCATCCTCATCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLGRCIW*HPHPSS
Trigger: ACTACTCGGATGAGGATGTCACCAAATACAACGACC...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATAGCGCCTGTACACAGTaGACAGAGGGAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNSACTQ*TEGALL
Trigger: GAGCAGGGCTCCCTCTGTGCACTGTGTACAGGCGCT...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATAGGCGGAGCCCAGCCTaGAAGCTGTTACTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNRRSPA*KLLLGV
Trigger: AACCCCCAGTAACAGCTTCCAGGCTGGGCTCCGCCT...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGGAGGATGGTGGTTCTaGAGCCCAGAGCATCTTTTT +
Preference number: 4 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPGGWWF*SPEHLF
Trigger: AAAAAGATGCTCTGGGCTCCAGAACCACCATCCTCC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGGCATGCTGCTGGAGGTaGTGGCCAGTGCAGACACAT +
Preference number: 4 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQACCWR*WPVQTH
Trigger: ATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGC...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGCAGATGAGTTTGTTCTaGAGAGGATCCCTAGACCCT +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRQMSLF*RGSLDP
Trigger: AGGGTCTAGGGATCCTCTCCAGAACAAACTCATCTG...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGGAGCACCTTACTTCCTaGAGGGGCAGAACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQEHLTS*RGRTSA
Trigger: GGCTGAGGTTCTGCCCCTCCAGGAAGTAAGGTGCTC...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTCGCCTTATTTACACCTCTGCTCCCCAGACTTCACCTTTCCTTGTCCATGCTAATATTCCAGATGAGTaGGTATTGACTAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SRLIYTSAPQTSPFLVHANIPDE*VLTKCG
Trigger: CCCACACTTAGTCAATACCCACTCATCTGGAATATT...AGCATGGACAAGGAAAGGTGAAGTCTGGGGAGCAGAGGTGTAAATAAGGCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTTGGAGTCTAGATGGATaGAGAAAGGTAACACGTTTA +
Preference number: 4 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCWSLDG*RKVTRL
Trigger: TAAACGTGTTACCTTTCTCCATCCATCTAGACTCCA...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
3UTR CAA 72 bp ATGGCTTCAGCCATCAGAGGGAGTTCAGGAGTCTCTTaGCTAACACACATACAGATGTGTGTTCTGTGCATA +
Preference number: 4 (lower is better)
Translates to: MASAIRGSSGVS*LTHIQMCVLCI
Trigger: TATGCACAGAACACACATCTGTATGTGTGTTAGCAAAGAGACTCCTGAACTCCCTCTGATGGCTGAAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGCAGATGAGTGGGTATTaGCTAAGTGTGGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRQMSGY*LSVGLS
Trigger: TGAAAGTCCCACACTTAGTCAATACCCACTCATCTG...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGAGAGTGGCACTGTGGTaGGGCTCTGGCACCTTTAGA +
Preference number: 4 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQRVALW*GSGTFR
Trigger: TCTAAAGGTGCCAGAGCCTCACCACAGTGCCACTCT...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR GCA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTACCTTTCCTTGTCCATaGTCAGGAAAGTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLTFPCP*SGKSIP
Trigger: TGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATGGCTCATTGGAGAGCTaGTGGATCAGCAACCACTCC +
Preference number: 4 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNGSLES*WISNHS
Trigger: GGAGTGGTTGCTGATCCACCAGCTCTCCAATGAGCC...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGCTCATCATCTCGCTGTaGCCTAGGGCTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQLIISL*PRAPDL
Trigger: CAAGTCTGGAGCCCTAGGCCACAGCGAGATGATGAG...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGCCTGGCCACTGGATGTaGCTTTTTGCAGAACACTCC +
Preference number: 4 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQPGHWM*LFAEHS
Trigger: GGAGTGTTCTGCAAAAAGCCACATCCAGTGGCCAGG...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTTGATTTTTGTTTCTaGAGTCTAGATGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDVDFCF*SLDGWR
Trigger: TCTCCATCCATCTAGACTCCAGAAACAAAAATCAAC...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR TCA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATGCACAGGCTCTGTCTTaGAATACGGGGACACATCAT +
Preference number: 4 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNAQALS*NTGTHH
Trigger: ATGATGTGTCCCCGTATTTCAAGACAGAGCCTGTGC...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGCCCAAATCTCCTACTTaGGCTTCCTTGAACTCTGCT +
Preference number: 4 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQPKSPT*ASLNSA
Trigger: AGCAGAGTTCAAGGAAGCCCAAGTAGGAGATTTGGG...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CCA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGCGGCTTTGCTGGCCCTaGAATCTCTGGAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQRLCWP*NLWKNK
Trigger: TTTATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCG...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS CCA 90 bp GCTGCTGGGCGGGATCTTGCGGCCGTCCCGGAACCAGGTCACCTGTaGCTGGGGGAAGCTGGCGATGCGCGGGGCACGGATGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: AAGRDLAAVPEPGHL*LGEAGDARGTDDSC
Trigger: GCAGCTGTCATCCGTGCCCCGCGCATCGCCAGCTTCCCCCAGCCACAGGTGACCTGGTTCCGGGACGGCCGCAAGATCCCGCCCAGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCACGTGGCTCAGCGTCTaGCCATGCCCGTCTGACCGG +
Preference number: 5 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLTWLSV*PCPSDR
Trigger: CCGGTCAGACGGGCATGGCAAGACGCTGAGCCACGT...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS TCA 90 bp CTCCGCTGGACCAGTGAATGGCGATGGCAGAGCTGTACCGCACGATaGTGGGCACGCCAGGCGGTCCTGGGGCACCTTCTCCGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: LRWTSEWRWQSCTAR*WARQAVLGHLLRGP
Trigger: CGGGCCCCGGAGAAGGTGCCCCAGGACCGCCTGGCGTGCCCATCATCGTGCGGTACAGCTCTGCCATCGCCATTCACTGGTCCAGCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
ENST00000479356.1
CDS GCA 90 bp GCCCGTTGCGATCAGCCTCGGGGACCTCGCTCCAGCGCACCAGCATaGTGCTGGAGGTGGTGGCCAGTGCAGACACATTGGTGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: ARCDQPRGPRSSAPA*CWRWWPVQTHWWGR
Trigger: CCGGCCCCACCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCTGGAGCGAGGTCCCCGAGGCTGATCGCAACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp CTGGGCGGGATCTTGCGGCCGTCCCGGAACCAGGTCACCTGTGGCTaGGGGAAGCTGGCGATGCGCGGGGCACGGATGACAGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LGGILRPSRNQVTCG*GKLAMRGARMTAAS
Trigger: AGAAGCAGCTGTCATCCGTGCCCCGCGCATCGCCAGCTTCCCCCAGCCACAGGTGACCTGGTTCCGGGACGGCCGCAAGATCCCGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCGGGCATCGGGCTCATaGGAGAGCTGGTGGATCAGC +
Preference number: 5 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLRASGS*ESWWIS
Trigger: GCTGATCCACCAGCTCTCCAATGAGCCCGATGCCCG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGTGCGCAGAGACACATaGGCTGGGGCCATGTCAGGG +
Preference number: 5 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLVRRDT*AGAMSG
Trigger: CCCTGACATGGCCCCAGCCAATGTGTCTCTGCGCAC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS CCA 90 bp CGTCAGGTTGATGGCTCGCCTTTCCACGGTGCTGAGAGTGGCCACTaGGTGCTCGGGCGCGTGGGGCAGTTGCCTGACTCGCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RQVDGSPFHGAESGH*VLGRVGQLPDSQVG
Trigger: GCCCACCTGCGAGTCAGGCAACTGCCCCACGCGCCCGAGCACCCAGTGGCCACTCTCAGCACCGTGGAAAGGCGAGCCATCAACCTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 90 bp TGCCATTGGGGGCGGCAGGGGGCTGCCAGATCAGCCGCACAGACGTaGTCCGCACCTCTGGGAACAGGATGCCCATGGGTGGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: CHWGRQGAARSAAQT*SAPLGTGCPWVVLG
Trigger: TCCCAGGACCACCCATGGGCATCCTGTTCCCAGAGGTGCGGACCACGTCTGTGCGGCTGATCTGGCAGCCCCCTGCCGCCCCCAATGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp GCCCTTGCGGGTCTGGGCCGTGATGCGGAACAGGTAGACAGACTCTaGCTTGAGGCCCGTGGCTGTGTACTGCCGGGCGCTGGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: ALAGLGRDAEQVDRL*LEARGCVLPGAGCQ
Trigger: CTGGCACCCAGCGCCCGGCAGTACACAGCCACGGGCCTCAAGCCAGAGTCTGTCTACCTGTTCCGCATCACGGCCCAGACCCGCAAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp GGAGGTGGCTCCCAAGTCACGTCCAGCTGTGTGGCCGTGGCGCCGTaGACGACCACGTTACGAGGTGCTGCTGTGGGCACTGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GGGSQVTSSCVAVAP*TTTLRGAAVGTASP
Trigger: TGGGGAGGCAGTGCCCACAGCAGCACCTCGTAACGTGGTCGTCCACGGCGCCACGGCCACACAGCTGGACGTGACTTGGGAGCCACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS-3UTR CAA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCCACCTGGACCTCGGTTaGCCGCTGCAGCAGGGCCCC +
Preference number: 5 (lower is better)
Translates to: TPQVQATQATCASQGRDGHLDLG*PLQQGP
Trigger: GGGGCCCTGCTGCAGCGGCAAACCGAGGTCCAGGTG...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTCACTGCCGGTGGGGTaGGGGATGGTGAGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGSLPVG*GMVSRR
Trigger: CCGCCGGCTCACCATCCCCAACCCCACCGGCAGTGA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCGTGCGCAGAGACACATaGGCTGGGGCCATGTCAGGG +
Preference number: 5 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSVRRDT*AGAMSG
Trigger: CCCTGACATGGCCCCAGCCAATGTGTCTCTGCGCAC...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCGGGTGATGGGCCCTTaGCCCGGGTCTCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGRVMGP*PGSPLD
Trigger: GTCCAGCGGAGACCCGGGCAAAGGGCCCATCACCCG...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCAGCAACAGAAGGCCTaGAGGCAGCGTGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLQQQKA*RQRAPG
Trigger: ACCTGGTGCACGCTGCCTCAAGGCCTTCTGTTGCTG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 90 bp GGGCGAAGCACTGGAACATGCCGGTATCATCGGGCACCAGGCCGCTaGTCTGCAGGCCCCCGTCGTTGCGCTGCCGGAAGCGGGTCAACT +
Preference number: 5 (lower is better)
Translates to: GRSTGTCRYHRAPGR*SAGPRRCAAGSGST
Trigger: AGTTGACCCGCTTCCGGCAGCGCAACGACGGGGGCCTGCAGATCAGCGGCCTGGTGCCCGATGATACCGGCATGTTCCAGTGCTTCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 90 bp AGGTTGATGGCTCGCCTTTCCACGGTGCTGAGAGTGGCCACTGGGTaGTCGGGCGCGTGGGGCAGTTGCCTGACTCGCAGGTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: RLMARLSTVLRVATG*SGAWGSCLTRRWAL
Trigger: CAGTGCCCACCTGCGAGTCAGGCAACTGCCCCACGCGCCCGAGCACCCAGTGGCCACTCTCAGCACCGTGGAAAGGCGAGCCATCAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 90 bp CGTTGCGATCAGCCTCGGGGACCTCGCTCCAGCGCACCAGCATGCTaGTGGAGGTGGTGGCCAGTGCAGACACATTGGTGGGGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: RCDQPRGPRSSAPAC*WRWWPVQTHWWGRK
Trigger: CTTCCGGCCCCACCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCTGGAGCGAGGTCCCCGAGGCTGATCGCAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS GCA 90 bp AGACTCTGGCTTGAGGCCCGTGGCTGTGTACTGCCGGGCGCTGGGTaGCAGCACCTCCACAGTGGCGGTGTTGGCCGTGGTGGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: RLWLEARGCVLPGAG*QHLHSGGVGRGGVE
Trigger: CTCAACACCACCACGGCCAACACCGCCACTGTGGAGGTGCTGGCACCCAGCGCCCGGCAGTACACAGCCACGGGCCTCAAGCCAGAGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS GCA 90 bp AGCTGGAGGCATTGTGGCTCACGGAGGCCGAGTGCAGTGCCCACCTaGCGCTGGGCAGCTCGCGGGTCTGGATGGTGTAGTAGCGCACAG +
Preference number: 5 (lower is better)
Translates to: SWRHCGSRRPSAVPT*RWAARGSGWCSSAQ
Trigger: CTGTGCGCTACTACACCATCCAGACCCGCGAGCTGCCCAGCGGCAGGTGGGCACTGCACTCGGCCTCCGTGAGCCACAATGCCTCCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp CAGCCTCGGGGACCTCGCTCCAGCGCACCAGCATGCTGCTGGAGGTaGTGGCCAGTGCAGACACATTGGTGGGGCCGGAAGAGGGAACTG +
Preference number: 5 (lower is better)
Translates to: QPRGPRSSAPACCWR*WPVQTHWWGRKREL
Trigger: CAGTTCCCTCTTCCGGCCCCACCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCTGGAGCGAGGTCCCCGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp TGCGATCAGCCTCGGGGACCTCGCTCCAGCGCACCAGCATGCTGCTaGAGGTGGTGGCCAGTGCAGACACATTGGTGGGGCCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: CDQPRGPRSSAPACC*RWWPVQTHWWGRKR
Trigger: CCTCTTCCGGCCCCACCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCTGGAGCGAGGTCCCCGAGGCTGATCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp AGGCATTGTGGCTCACGGAGGCCGAGTGCAGTGCCCACCTGCCGCTaGGCAGCTCGCGGGTCTGGATGGTGTAGTAGCGCACAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: RHCGSRRPSAVPTCR*AARGSGWCSSAQGR
Trigger: TCTCCCCTGTGCGCTACTACACCATCCAGACCCGCGAGCTGCCCAGCGGCAGGTGGGCACTGCACTCGGCCTCCGTGAGCCACAATGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp TCCTCTGCTGGCGGCTGCCATCGGATTAGCACGGAGGTGGTGGTGTaGGGCGTCACGGAGAGGATGGTGGGTGCTTCATCGGGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSAGGCHRISTEVVV*GVTERMVGASSGAA
Trigger: GGCTGCCCCCGATGAAGCACCCACCATCCTCTCCGTGACGCCCCACACCACCACCTCCGTGCTAATCCGATGGCAGCCGCCAGCAGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp TGTCCAGCGGAGGTGGCTCCCAAGTCACGTCCAGCTGTGTGGCCGTaGCGCCGTGGACGACCACGTTACGAGGTGCTGCTGTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: CPAEVAPKSRPAVWP*RRGRPRYEVLLWAL
Trigger: CAGTGCCCACAGCAGCACCTCGTAACGTGGTCGTCCACGGCGCCACGGCCACACAGCTGGACGTGACTTGGGAGCCACCTCCGCTGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp TCTGGCTGTCCAGCGGAGGTGGCTCCCAAGTCACGTCCAGCTGTGTaGCCGTGGCGCCGTGGACGACCACGTTACGAGGTGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SGCPAEVAPKSRPAV*PWRRGRPRYEVLLW
Trigger: CCACAGCAGCACCTCGTAACGTGGTCGTCCACGGCGCCACGGCCACACAGCTGGACGTGACTTGGGAGCCACCTCCGCTGGACAGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS-3UTR CAA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCCACGTGGATGCTGTCTaGAAAGTTAGGCCGGGCGGT +
Preference number: 5 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLHVDAV*KVRPGG
Trigger: ACCGCCCGGCCTAACTTTCAAGACAGCATCCACGTG...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTTTCTCTCCCGGCTCTaGCCAGCTGACCTTCAGCGA +
Preference number: 5 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLFLSRL*PADLQR
Trigger: TCGCTGAAGGTCAGCTGGCAAGAGCCGGGAGAGAAA...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGCCCAGCACGAGCCCGTaGCGATCAGCCTCGGGGACC +
Preference number: 5 (lower is better)
Translates to: PTPTEHHLLGRASSACTQPSTSP*RSASGT
Trigger: GGTCCCCGAGGCTGATCGCAACGGGCTCGTGCTGGG...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCTTGGCCGTGGTGGTGTaGAGCCGGTGTGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSLAVVV*SRCVIW
Trigger: CCAGATCACACACCGGCTCAACACCACCACGGCCAA...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCCATGTGGCCCCTGGGTaGTTGATGCCTCGAAGCGTG +
Preference number: 5 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSHVAPG*LMPRSV
Trigger: CACGCTTCGAGGCATCAACAACCCAGGGGCCACATG...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCTCCACGGTCACGATCTaGCTGACTCCATCCACGGGG +
Preference number: 5 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSSTVTI*LTPSTG
Trigger: CCCCGTGGATGGAGTCAGCAAGATCGTGACCGTGGA...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCGGGCCTTCTGGTGGTTaGAGTCGACCTCGTACTCGC +
Preference number: 5 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSGPSGG*SRPRTR
Trigger: GCGAGTACGAGGTCGACTCAAACCACCAGAAGGCCC...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGGGGGTTCTGGGGCGTaGGAGTCCGACTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGGGSGA*ESDWPW
Trigger: CCAAGGCCAGTCGGACTCCAACGCCCCAGAACCCCC...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGCGGTGGGGCAGGTGTaGGGCTGGCCTTACAGGGCT +
Preference number: 5 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGAVGQV*GWPYRA
Trigger: AGCCCTGTAAGGCCAGCCCAACACCTGCCCCACCGC...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS CCA 90 bp CCTCGGGGACCTCGCTCCAGCGCACCAGCATGCTGCTGGAGGTGGTaGCCAGTGCAGACACATTGGTGGGGCCGGAAGAGGGAACTGACT +
Preference number: 5 (lower is better)
Translates to: PRGPRSSAPACCWRW*PVQTHWWGRKRELT
Trigger: AGTCAGTTCCCTCTTCCGGCCCCACCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCTGGAGCGAGGTCCCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 90 bp GGTCTGGATGGTGTAGTAGCGCACAGGGGAGAGCCCGTCGCTCCCTaGCTCCCAGGACAGCAGCACGCTGCGTGCTCTCACATCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLDGVVAHRGEPVAP*LPGQQHAACSHILL
Trigger: CAGGAGGATGTGAGAGCACGCAGCGTGCTGCTGTCCTGGGAGCCAGGGAGCGACGGGCTCTCCCCTGTGCGCTACTACACCATCCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS-3UTR CAA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCTGCAGGCCCCCGTCGTaGCGCTGCCGGAAGCGGGTC +
Preference number: 5 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLCRPPS*RCRKRV
Trigger: GACCCGCTTCCGGCAGCGCAACGACGGGGGCCTGCA...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGCTTCCGCGTGCACATaGCCCGGAGGGACCGTGGGA +
Preference number: 5 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQASACT*PGGTVG
Trigger: TCCCACGGTCCCTCCGGGCAATGTGCACGCGGAAGC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCCTTGGCCCTGGCCCTTaGAGGTCATGGCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: TPQVQATQATCASQGRDGLGPGP*RSWRPP
Trigger: AGGTGGCCGCCATGACCTCAAAGGGCCAGGGCCAAG...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCCCAGCACGAGCCCGTaGCGATCAGCCTCGGGGACC +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEPSTSP*RSASGT
Trigger: GGTCCCCGAGGCTGATCGCAACGGGCTCGTGCTGGG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCGCAAGAATGATGCCATaGGGGGCGGCAGGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGARMMP*GAAGGC
Trigger: GCAGCCCCCTGCCGCCCCCAATGGCATCATTCTTGC...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCCCCAGGAGGATGCCATaGATCTTGTCCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSPRRMP*ILSSAG
Trigger: GCCAGCAGAGGACAAGATCAATGGCATCCTCCTGGG...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGAGCGCTGGGGGCTGCTaGCTGGGTCTGGCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: PTPTEHHLLGRASSACTQSAGGC*LGLALG
Trigger: ACCCAAGGCCAGACCCAGCAAGCAGCCCCCAGCGCT...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATAGCGCTGGGGGCTGCTaGCTGGGTCTGGCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHSAGGC*LGLALG
Trigger: ACCCAAGGCCAGACCCAGCAAGCAGCCCCCAGCGCT...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGTCCGACTGGCCTaGGGCCGAAAGAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHGVRLA*GRKRLP
Trigger: GGGCAGCCTCTTTCGGCCCAAGGCCAGTCGGACTCC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS TCA 90 bp AGGTCACCTGTGGCTGGGGGAAGCTGGCGATGCGCGGGGCACGGATaGCAGCTGCTTCTCCGTGGGAGACGCTCTGGTGCTTCTCACCTT +
Preference number: 5 (lower is better)
Translates to: RSPVAGGSWRCAGHG*QLLLRGRRSGASHL
Trigger: AAGGTGAGAAGCACCAGAGCGTCTCCCACGGAGAAGCAGCTGTCATCCGTGCCCCGCGCATCGCCAGCTTCCCCCAGCCACAGGTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS GCA 90 bp AAGCACTGGAACATGCCGGTATCATCGGGCACCAGGCCGCTGATCTaGAGGCCCCCGTCGTTGCGCTGCCGGAAGCGGGTCAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: KHWNMPVSSGTRPLI*RPPSLRCRKRVNFS
Trigger: GGAGAAGTTGACCCGCTTCCGGCAGCGCAACGACGGGGGCCTGCAGATCAGCGGCCTGGTGCCCGATGATACCGGCATGTTCCAGTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 90 bp GCGTTCCAGGTGAAGCGGATGGTCGTGGAATTGGTGGCTTCCGCGTaGACATTGCCCGGAGGGACCGTGGGAACTCCCTGCAGCGTCCAC +
Preference number: 5 (lower is better)
Translates to: AFQVKRMVVELVASA*TLPGGTVGTPCSVH
Trigger: GTGGACGCTGCAGGGAGTTCCCACGGTCCCTCCGGGCAATGTGCACGCGGAAGCCACCAATTCCACGACCATCCGCTTCACCTGGAACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 90 bp TCTTGTCCTCTGCTGGCGGCTGCCATCGGATTAGCACGGAGGTGGTaGTGTGGGGCGTCACGGAGAGGATGGTGGGTGCTTCATCGGGGG +
Preference number: 5 (lower is better)
Translates to: SCPLLAAAIGLARRW*CGASRRGWWVLHRG
Trigger: CCCCCGATGAAGCACCCACCATCCTCTCCGTGACGCCCCACACCACCACCTCCGTGCTAATCCGATGGCAGCCGCCAGCAGAGGACAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS-3UTR CAA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCGGGAGGGGCAGCGCTaGGCTACCCCAACCCTTCCT +
Preference number: 5 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGREGQR*ATPTLP
Trigger: AGGAAGGGTTGGGGTAGCCAAGCGCTGCCCCTCCCG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCGGGGACACATCATCTaGGGCTCTGGCCGCGCGGAT +
Preference number: 5 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGRGHII*GSGRAD
Trigger: ATCCGCGCGGCCAGAGCCCAAGATGATGTGTCCCCG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCACCACGGCTGCGTCCTaGTACCAGGTGATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: AGHPEAFSSLGHACLAASTTAAS*YQVMEG
Trigger: GCCCTCCATCACCTGGTACAAGGACGCAGCCGTGGT...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCGACTCAGGGTTCCCATaGTATTCCATCTCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLDSGFP*YSISGR
Trigger: TCTCCCGGAGATGGAATACAATGGGAACCCTGAGTC...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCGCCAGTGCAGACACATaGGTGGGGCCGGAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: TPQVQATQATCASQGRDGASADT*VGPEEG
Trigger: TCCCTCTTCCGGCCCCACCAATGTGTCTGCACTGGC...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGCAAGAATGATGCCATaGGGGGCGGCAGGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHARMMP*GAAGGC
Trigger: GCAGCCCCCTGCCGCCCCCAATGGCATCATTCTTGC...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTCCACAGTGGCGGTGTaGGCCGTGGTGGTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGSTVAV*AVVVLS
Trigger: GCTCAACACCACCACGGCCAACACCGCCACTGTGGA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGTTGCTGGGTCTGGCCTaGGGTGGGGGTGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: PPPLSNVARFLGGRLGASLLGLA*GGGAPR
Trigger: CCTCGGAGCACCCCCACCCAAGGCCAGACCCAGCAA...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 90 bp TTGCCTGACTCGCAGGTGGGCACTGCGAGAGTCGTTGCCTCCTGCTaGGATCACCCGGCAGGTGTACGTGCCGATGTCTCCCGACCACGT +
Preference number: 5 (lower is better)
Translates to: LPDSQVGTARVVASC*DHPAGVRADVSRPR
Trigger: ACGTGGTCGGGAGACATCGGCACGTACACCTGCCGGGTGATCTCAGCAGGAGGCAACGACTCTCGCAGTGCCCACCTGCGAGTCAGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 90 bp CTGTGGCTGGGGGAAGCTGGCGATGCGCGGGGCACGGATGACAGCTaGTTCTCCGTGGGAGACGCTCTGGTGCTTCTCACCTTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: LWLGEAGDARGTDDS*FSVGDALVLLTFLK
Trigger: TTTGAGGAAGGTGAGAAGCACCAGAGCGTCTCCCACGGAGAAGCAGCTGTCATCCGTGCCCCGCGCATCGCCAGCTTCCCCCAGCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS GCA 90 bp CACAATGAAGCTGGAGGCATTGTGGCTCACGGAGGCCGAGTGCAGTaGCCACCTGCCGCTGGGCAGCTCGCGGGTCTGGATGGTGTAGTA +
Preference number: 5 (lower is better)
Translates to: HNEAGGIVAHGGRVQ*PPAAGQLAGLDGVV
Trigger: TACTACACCATCCAGACCCGCGAGCTGCCCAGCGGCAGGTGGGCACTGCACTCGGCCTCCGTGAGCCACAATGCCTCCAGCTTCATTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS-3UTR CAA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCAGTGCAGACACATaGGTGGGGCCGGAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAASADT*VGPEEG
Trigger: TCCCTCTTCCGGCCCCACCAATGTGTCTGCACTGGC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCGCTTCTCCCCAGCCCTaGCGGGTCTGGGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLASPQP*RVWAVM
Trigger: CATCACGGCCCAGACCCGCAAGGGCTGGGGAGAAGC...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCATGAAGCTGGAGGCATaGTGGCTCACGGAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: TPQVQATQATCASQGRDGMKLEA*WLTEAE
Trigger: CTCGGCCTCCGTGAGCCACAATGCCTCCAGCTTCAT...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTGGGCCCGTGGTGACGTaGGCTTCGATCTCCGGCCCG +
Preference number: 5 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGGPVVT*ASISGP
Trigger: CGGGCCGGAGATCGAAGCCAACGTCACCACGGGCCC...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGTTTCTGGGAGGACGGTaGGGAGCCTCGGCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQFLGGR*GASAVP
Trigger: TGGCACAGCCGAGGCTCCCAACCGTCCTCCCAGAAA...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS GCA 90 bp CACCCGAGTCGCTCTCCGTGTAGCTGTAGGCCTGTGCCCTCGAGATaGCCTTCTGCTGTCGCCGCCACGAGTTGTAGTATGTGGGGTCAC +
Preference number: 5 (lower is better)
Translates to: HPSRSPCSCRPVPSR*PSAVAATSCSMWGH
Trigger: GTGACCCCACATACTACAACTCGTGGCGGCGACAGCAGAAGGGCATCTCGAGGGCACAGGCCTACAGCTACACGGAGAGCGACTCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS GCA 90 bp GTGGTCTGGCTCACCCGAGTCGCTCTCCGTGTAGCTGTAGGCCTGTaGCCTCGAGATGCCCTTCTGCTGTCGCCGCCACGAGTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: VVWLTRVALRVAVGL*PRDALLLSPPRVVV
Trigger: TACTACAACTCGTGGCGGCGACAGCAGAAGGGCATCTCGAGGGCACAGGCCTACAGCTACACGGAGAGCGACTCGGGTGAGCCAGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS CCA 90 bp TGTGAGATGTGCAGGGAGCCGTTTCTGTCCAGGCGGATACGAGGATaGCTCTCCGTGCCCAGGGTGGCCCCGTCCTTCTCCCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: CEMCREPFLSRRIRG*LSVPRVAPSFSQMY
Trigger: GTACATCTGGGAGAAGGACGGGGCCACCCTGGGCACGGAGAGCCATCCTCGTATCCGCCTGGACAGAAACGGCTCCCTGCACATCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS-3UTR CAA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCCTGCTGGGCGGGATCTaGCGGCCGTCCCGGAACCAG +
Preference number: 5 (lower is better)
Translates to: FSLNPGIRKYQVDGKILALLGGI*RPSRNQ
Trigger: CTGGTTCCGGGACGGCCGCAAGATCCCGCCCAGCAG...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCCACCCCAACAGAGCATCATCTCTTGGGCAGGGCCAGCAGCGCCTGTACACAGGCACTGCGAGAGTCGTaGCCTCCTGCTGAGATCACC +
Preference number: 5 (lower is better)
Translates to: PTPTEHHLLGRASSACTQALRES*PPAEIT
Trigger: GGTGATCTCAGCAGGAGGCAACGACTCTCGCAGTGC...CTGTGTACAGGCGCTGCTGGCCCTGCCCAAGAGATGATGCTCTGTTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTTTCTCTCCCGGCTCTaGCCAGCTGACCTTCAGCGA +
Preference number: 5 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGFLSRL*PADLQR
Trigger: TCGCTGAAGGTCAGCTGGCAAGAGCCGGGAGAGAAA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGAGCGGGGGCCGATGTaGGAAATGCCCAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEERGPM*EMPRLV
Trigger: CACCAACCTGGGCATTTCCAACATCGGCCCCCGCTC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGCATGTGGCCCCTGGGTaGTTGATGCCTCGAAGCGTG +
Preference number: 5 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGHVAPG*LMPRSV
Trigger: CACGCTTCGAGGCATCAACAACCCAGGGGCCACATG...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGGTCAGCTCACTGAACTaGACCGAGCTGGGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGVSSLN*TELGAL
Trigger: CAGCGCTCCCAGCTCGGTCAAGTTCAGTGAGCTGAC...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCCGGGTGATGGGCCCTTaGCCCGGGTCTCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: FSLNPGIRKYQVDGKILARVMGP*PGSPLD
Trigger: GTCCAGCGGAGACCCGGGCAAAGGGCCCATCACCCG...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCTCGGCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCCTTGGGGATGTCTTaGATGAGGATGTCCCATAGT +
Preference number: 5 (lower is better)
Translates to: PRPRLPGGLQSLASAPSLSLGMS*MRMSHS
Trigger: ACTATGGGACATCCTCATCAAAGACATCCCCAAGGA...GAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGCCTAGGGCTCCAGACTaGGCACTGTTCCCCGAGTCT +
Preference number: 5 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAPRAPD*ALFPES
Trigger: AGACTCGGGGAACAGTGCCAAGTCTGGAGCCCTAGG...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGACGGAGAGCCGCCTGTaGTTGAGTTCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PPPLSNVARFLGGRLGASTESRL*LSSRAG
Trigger: CCCTGCCCTGGAACTCAACAACAGGCGGCTCTCCGT...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGACGGAGAGCCGCCTGTaGTTGAGTTCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKETESRL*LSSRAG
Trigger: CCCTGCCCTGGAACTCAACAACAGGCGGCTCTCCGT...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGGGCCTTCTGGTGGTTaGAGTCGACCTCGTACTCGC +
Preference number: 5 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQGPSGG*SRPRTR
Trigger: GCGAGTACGAGGTCGACTCAAACCACCAGAAGGCCC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCCTCCTTTGGGGAAGATaGTGCTTCCCTTCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AGHPEAFSSLGHACLAASLLWGR*CFPSQA
Trigger: GGCCTGGGAAGGGAAGCACAATCTTCCCCAAAGGAG...GGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCTGGTGTGAACCTGCTTaGGGTGGAGTCCCACAGGCA +
Preference number: 5 (lower is better)
Translates to: TPQVQATQATCASQGRDGWCEPA*GGVPQA
Trigger: TGCCTGTGGGACTCCACCCAAAGCAGGTTCACACCA...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 90 bp CATCGGGGGCAGCCTGCAGGGTGGTCAGTGACTCCGACTCCTCGCTaGACTCGCTGTCGCCAATGTCATTGGTCGCCTTCACTCGGAACT +
Preference number: 5 (lower is better)
Translates to: HRGQPAGWSVTPTPR*TRCRQCHWSPSLGT
Trigger: AGTTCCGAGTGAAGGCGACCAATGACATTGGCGACAGCGAGTTCAGCGAGGAGTCGGAGTCACTGACCACCCTGCAGGCTGCCCCCGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS-3UTR CAA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGATCAGGGGCCTGGCATaGGCCACACACTCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGIRGLA*ATHSKV
Trigger: TACCTTGGAGTGTGTGGCCAATGCCAGGCCCCTGAT...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTACCTCGCCGGCTGCATaGCGGGCGAAGCACTGGAAC +
Preference number: 5 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGTSPAA*RAKHWN
Trigger: GTTCCAGTGCTTCGCCCGCAATGCAGCCGGCGAGGT...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATAGGGCGCGTGGGGCAGTaGCCTGACTCGCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIGRVGQ*PDSQVG
Trigger: GCCCACCTGCGAGTCAGGCAACTGCCCCACGCGCCC...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGCGGATCAGGGGGCTGTaGCCATCAAAGGGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: PPPLSNVARFLGGRLGASRIRGL*PSKGLV
Trigger: GACCAAGCCCTTTGATGGCAACAGCCCCCTGATCCG...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGGTCACTGAGGTAGCTTaGGGGTCCACACTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGVTEVA*GSTLAR
Trigger: CCTGGCCAGTGTGGACCCCAAAGCTACCTCAGTGAC...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGCCCTGGTTGATGCCGTaGATGAACTGGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWPWLMP*MNWGLG
Trigger: CCCCAGCCCCCAGTTCATCAACGGCATCAACCAGGG...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTACGTGGCTCAGCGTCTaGCCATGCCCGTCTGACCGG +
Preference number: 5 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISTWLSV*PCPSDR
Trigger: CCGGTCAGACGGGCATGGCAAGACGCTGAGCCACGT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCAGGGGGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATAGGATGCCATTGATCTaGTCCTCTGCTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: AGGLDEAVRCLPATVMVHRMPLI*SSAGGC
Trigger: GCAGCCGCCAGCAGAGGACAAGATCAATGGCATCCT...ATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CCACCACCCCTTTCTAATGTGGCCAGGTTTCTGGGAGGACGGTTGGGAGCCTCGGTCAGCTCACTGAACTaGACCGAGCTGGGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: PPPLSNVARFLGGRLGASVSSLN*TELGAL
Trigger: CAGCGCTCCCAGCTCGGTCAAGTTCAGTGAGCTGAC...CGAGGCTCCCAACCGTCCTCCCAGAAACCTGGCCACATTAGAAAGGGGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTCCACGGTCACGATCTaGCTGACTCCATCCACGGGG +
Preference number: 5 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGSTVTI*LTPSTG
Trigger: CCCCGTGGATGGAGTCAGCAAGATCGTGACCGTGGA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCTCCTTGGGGATGTCTTaGATGAGGATGTCCCATAGT +
Preference number: 5 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSSLGMS*MRMSHS
Trigger: ACTATGGGACATCCTCATCAAAGACATCCCCAAGGA...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp ACGCCCCAAGTGCAAGCAACCCAGGCCACCTGTGCCTCACAGGGGAGAGATGGCTGCAACACTGGGAGATaGCTTAGGGCACAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: TPQVQATQATCASQGRDGCNTGR*LRAQGG
Trigger: GCCTCCTTGTGCCCTAAGCAATCTCCCAGTGTTGCA...GCCATCTCTCCCCTGTGAGGCACAGGTGGCCTGGGTTGCTTGCACTTGGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 90 bp ACGGAACTGGTAGGAGCGTGCAGGAACCAGGCCCTTGACTGTCACTaGGGTAGCTTTGGGGTCCACACTGGCCAGGAGTACAGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TELVGACRNQALDCH*GSFGVHTGQEYSPG
Trigger: CCCTGGACTGTACTCCTGGCCAGTGTGGACCCCAAAGCTACCTCAGTGACAGTCAAGGGCCTGGTTCCTGCACGCTCCTACCAGTTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS-3UTR CAA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGTTGTTGTGGAGCCACTaGAACTCCAGTGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQLLWSH*NSSGQL
Trigger: CAGCTGGCCACTGGAGTTCAAGTGGCTCCACAACAA...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCCACGCCTGCCTGGCGGCCTCCAGTCCTTAGCCTCCGCTCCCTCTCTCTCTCCTTGTTATCCCCGTTTTaGTCGTTAACAGCCTGCACA +
Preference number: 5 (lower is better)
Translates to: ATPAWRPPVLSLRSLSLSLLSPF*SLTACT
Trigger: TGTGCAGGCTGTTAACGACAAAAACGGGGATAACAA...GGAGAGAGAGAGGGAGCGGAGGCTAAGGACTGGAGGCCGCCAGGCAGGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCATGGGCTGGCTGGTCTaGTTATCCCCGTTTTTGTCG +
Preference number: 5 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGMGWLV*LSPFLS
Trigger: CGACAAAAACGGGGATAACAAGACCAGCCAGCCCAT...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTCGGGCATCGGGCTCATaGGAGAGCTGGTGGATCAGC +
Preference number: 5 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGRASGS*ESWWIS
Trigger: GCTGATCCACCAGCTCTCCAATGAGCCCGATGCCCG...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGGCACTGCGAGACGAGTaGCCTTCCACCAGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEALRDE*PSTSQN
Trigger: ATTCTGGCTGGTGGAAGGCAACTCGTCTCGCAGTGC...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTCCACAGTGGCGGTGTaGGCCGTGGTGGTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISSTVAV*AVVVLS
Trigger: GCTCAACACCACCACGGCCAACACCGCCACTGTGGA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGCTGTCGCCAATGTCATaGGTCGCCTTCACTCGGAAC +
Preference number: 5 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQLSPMS*VAFTRN
Trigger: GTTCCGAGTGAAGGCGACCAATGACATTGGCGACAG...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCGTGGCCCCTGGGTTGTaGATGCCTCGAAGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLVAPGL*MPRSVK
Trigger: CTTCACGCTTCGAGGCATCAACAACCCAGGGGCCAC...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGCCCTCACCCACAGCGTaGTACACGCTCATCCGTATC +
Preference number: 5 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGPSPTA*YTLIRI
Trigger: GATACGGATGAGCGTGTACAACGCTGTGGGTGAGGG...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATAGGGCCCGTGGTGACGTaGGCTTCGATCTCCGGCCCG +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIGPVVT*ASISGP
Trigger: CGGGCCGGAGATCGAAGCCAACGTCACCACGGGCCC...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GGTCTGGATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGTTCTTGGCGTACTTCTaGCTCTGGCCCCGGATGATG +
Preference number: 5 (lower is better)
Translates to: GLDEAVRCLPATVMVHGGFLAYF*LWPRMM
Trigger: CATCATCCGGGGCCAGAGCAAGAAGTACGCCAAGAA...CCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCGGCAGAAAGAGTTCTaGACGGAGAGCCGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKERQKEF*TESRLL
Trigger: CAACAGGCGGCTCTCCGTCAAGAACTCTTTCTGCCG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCGGAGGCAGCCTGGGTTaGCAAACTCTCTGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLGGSLG*QTLWSP
Trigger: AGGGCTCCAGAGAGTTTGCAAACCCAGGCTGCCTCC...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGAGGTGGTGGTCAGGATaGCCATGTGCGCATGCCCAT +
Preference number: 5 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGRWWSG*PCAHAH
Trigger: ATGGGCATGCGCACATGGCAATCCTGACCACCACCT...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 90 bp CGGTGTGTGACCCACGTGAGCCACGTGCTCAGGCTTCCGGCTTCCTaGGCAATCCTCAACCCAAGCTGGTCCTCAGTTAGCACTAACAGC +
Preference number: 5 (lower is better)
Translates to: RCVTHVSHVLRLPAS*AILNPSWSSVSTNS
Trigger: GCTGTTAGTGCTAACTGAGGACCAGCTTGGGTTGAGGATTGCTCAGGAAGCCGGAAGCCTGAGCACGTGGCTCACGTGGGTCACACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479356.1
CDS-3UTR CAA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTCCTCCAGCAGCAGGTaGTTCACATCAGCATCCGTG +
Preference number: 5 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGSSSSR*FTSASV
Trigger: CACGGATGCTGATGTGAACAACCTGCTGCTGGAGGA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCGGGTGTTGGTTCGATaGTACTCCTCCCAGGAGATC +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKERVLVR*YSSQEI
Trigger: GATCTCCTGGGAGGAGTACAATCGAACCAACACCCG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGACTCAGGGTTCCCATaGTATTCCATCTCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: QLAGHPEAFSSLGHACLADSGFP*YSISGR
Trigger: TCTCCCGGAGATGGAATACAATGGGAACCCTGAGTC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACCGCTCCCGATGGCGTaGAAGGCCTGGACCTGGACG +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIPLPMA*KAWTWT
Trigger: CGTCCAGGTCCAGGCCTTCAACGCCATCGGGAGCGG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCTGTGCTTGTTCAGGTaGTCCAGCTCGTACTGCGTG +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKELCLFR*SSSYCV
Trigger: CACGCAGTACGAGCTGGACAACCTGAACAAGCACAG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCCCTCACCCACAGCGTaGTACACGCTCATCCGTATC +
Preference number: 5 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLPSPTA*YTLIRI
Trigger: GATACGGATGAGCGTGTACAACGCTGTGGGTGAGGG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATATTGCTGGGTCTGGCCTaGGGTGGGGGTGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKILLGLA*GGGAPR
Trigger: CCTCGGAGCACCCCCACCCAAGGCCAGACCCAGCAA...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGTTCTTGGCGTACTTCTaGCTCTGGCCCCGGATGATG +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEFLAYF*LWPRMM
Trigger: CATCATCCGGGGCCAGAGCAAGAAGTACGCCAAGAA...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCGGCAGAAAGAGTTCTaGACGGAGAGCCGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLRQKEF*TESRLL
Trigger: CAACAGGCGGCTCTCCGTCAAGAACTCTTTCTGCCG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATAGGGGGTTCTGGGGCGTaGGAGTCCGACTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIGGSGA*ESDWPW
Trigger: CCAAGGCCAGTCGGACTCCAACGCCCCAGAACCCCC...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGTGGAGAAACCGCTTTTaGGACACTGGAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEWRNRF*DTGAGL
Trigger: CAGCCCAGCTCCAGTGTCCAAAAAGCGGTTTCTCCA...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCTCTTTTTGGTTTGTCTaGGCAGTGTGGGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: AGWTSRSFFFPRPRLPGGSFWFV*AVWVWS
Trigger: GCTCCACACCCACACTGCCAAGACAAACCAAAAAGA...GCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 90 bp GTTAACAGCCTGCACATAGTAGCGACCTGCGTCAGGGGCCACCGTTaGCAGGATGACAAGGGTGTTCTCCAGCGTGATGGCTATGCGGCT +
Preference number: 5 (lower is better)
Translates to: VNSLHIVATCVRGHR*QDDKGVLQRDGYAA
Trigger: AGCCGCATAGCCATCACGCTGGAGAACACCCTTGTCATCCTGTCAACGGTGGCCCCTGACGCAGGTCGCTACTATGTGCAGGCTGTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS GCA 90 bp CTGCCCTCGGCCATGCATGTAAGCACCAGGCGGTTTCCTTCCAAGTaGACCTGTGTCCGCACAGGCTCTGTCTTGAAATACGGGGACACA +
Preference number: 5 (lower is better)
Translates to: LPSAMHVSTRRFPSK*TCVRTGSVLKYGDT
Trigger: TGTGTCCCCGTATTTCAAGACAGAGCCTGTGCGGACACAGGTGCACTTGGAAGGAAACCGCCTGGTGCTTACATGCATGGCCGAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000585283.1
CDS GCA 90 bp CCTGTAGTAGCACAAGCGCCTTCTCAGGCGGAGGACAGAGGCAAGTaGCCCAAGTGGAGGGACCCAGGAAGAAGGGAGATAATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: PVVAQAPSQAEDRGK*PKWRDPGRREIMSC
Trigger: ACAGCTCATTATCTCCCTTCTTCCTGGGTCCCTCCACTTGGGGCACTTGCCTCTGTCCTCCGCCTGAGAAGGCGCTTGTGCTACTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479356.1
CDS CCA 90 bp CCCTTGAGAATTCCATTCTGGTGGCTCTCAGGAGGCGGCTGCCACTaGATCATGATGGACTGGTTGGTTCGACCGCTGGCGATGACGTTC +
Preference number: 5 (lower is better)
Translates to: PLRIPFWWLSGGGCH*IMMDWLVRPLAMTF
Trigger: GAACGTCATCGCCAGCGGTCGAACCAACCAGTCCATCATGATCCAGTGGCAGCCGCCTCCTGAGAGCCACCAGAATGGAATTCTCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 90 bp TCCAGGGCAGGGAAGCTGCTTTCATCCAAGCTCATCATCTCGCTGTaGCCTAGGGCTCCAGACTTGGCACTGTTCCCCGAGTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: SRAGKLLSSKLIISL*PRAPDLALFPESVF
Trigger: GAAGACAGACTCGGGGAACAGTGCCAAGTCTGGAGCCCTAGGCCACAGCGAGATGATGAGCTTGGATGAAAGCAGCTTCCCTGCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS CCA 90 bp CCGCCTGTGCTTGTTCAGGTAGGTAAGCTCAGCCCATGTGGCCCCTaGGTTGTTGATGCCTCGAAGCGTGAAGCCCCTCAGTCCTTCATA +
Preference number: 5 (lower is better)
Translates to: PPVLVQVGKLSPCGP*VVDASKREAPQSFI
Trigger: TATGAAGGACTGAGGGGCTTCACGCTTCGAGGCATCAACAACCCAGGGGCCACATGGGCTGAGCTTACCTACCTGAACAAGCACAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424778.1
CDS-3UTR CAA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGTCAGCTCCCTGTTGTaGTGGAGCCACTTGAACTCC +
Preference number: 5 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWVSSLL*WSHLNS
Trigger: GGAGTTCAAGTGGCTCCACAACAACAGGGAGCTGAC...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGTTGCCATCAAAGGGCTaGGTCCACGTCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGLPSKG*VHVRLM
Trigger: CATCAACCTGACGTGGACCAAGCCCTTTGATGGCAA...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GCCACTTCCCCAGCTCCGTGTAATTCCCAAGGGAGCAGTGAACCCCACCATCTCCGGGTGTTGGTTCGATaGTACTCCTCCCAGGAGATC +
Preference number: 5 (lower is better)
Translates to: ATSPAPCNSQGSSEPHHLRVLVR*YSSQEI
Trigger: GATCTCCTGGGAGGAGTACAATCGAACCAACACCCG...GAGATGGTGGGGTTCACTGCTCCCTTGGGAATTACACGGAGCTGGGGAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACTTGGCCCTGGCCCTTaGAGGTCATGGCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKILGPGP*RSWRPP
Trigger: AGGTGGCCGCCATGACCTCAAAGGGCCAGGGCCAAG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCTTGGCCGTGGTGGTGTaGAGCCGGTGTGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: FSLNPGIRKYQVDGKILALAVVV*SRCVIW
Trigger: CCAGATCACACACCGGCTCAACACCACCACGGCCAA...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTAGGATGCCATTGATCTaGTCCTCTGCTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTRMPLI*SSAGGC
Trigger: GCAGCCGCCAGCAGAGGACAAGATCAATGGCATCCT...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGGCAGGGATGAGGTCGTaGTATTTGGTGACATCCTCA +
Preference number: 5 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQAGMRS*YLVTSS
Trigger: TGAGGATGTCACCAAATACAACGACCTCATCCCTGC...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCAGGGATGAGGTCGTaGTATTTGGTGACATCCTCA +
Preference number: 5 (lower is better)
Translates to: QLAGHPEAFSSLGHACLAAGMRS*YLVTSS
Trigger: TGAGGATGTCACCAAATACAACGACCTCATCCCTGC...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTGGAGTCCGACTGGCCTaGGGCCGAAAGAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCGVRLA*GRKRLP
Trigger: GGGCAGCCTCTTTCGGCCCAAGGCCAGTCGGACTCC...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGGGATGCCCATTCTTTTaGCAGAGAGCAGCGGCAGTG +
Preference number: 5 (lower is better)
Translates to: HGFLPPSERRLCWPWNLWGCPFF*QRAAAV
Trigger: CACTGCCGCTGCTCTCTGCAAAAAGAATGGGCATCC...CCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS CCA 90 bp GTTCCGCATGGAGTACATGGAGGTAAGCTCAGCCCATGTGGCCCCTaGGTTGTTGATGCCTCGAAGCGTGAAGCCCCTCAGTCCTTCATA +
Preference number: 5 (lower is better)
Translates to: VPHGVHGGKLSPCGP*VVDASKREAPQSFI
Trigger: TATGAAGGACTGAGGGGCTTCACGCTTCGAGGCATCAACAACCCAGGGGCCACATGGGCTGAGCTTACCTCCATGTACTCCATGCGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 90 bp TCCTCAACCCAAGCTGGTCCTCAGTTAGCACTAACAGCCGTTCTCTaGGGGCCTCCTGGGGGTTACTTAGCTAGGAGTCCAGCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: SSTQAGPQLALTAVL*GPPGGYLARSPALG
Trigger: TCCTAGAGCTGGACTCCTAGCTAAGTAACCCCCAGGAGGCCCCCAGAGAACGGCTGTTAGTGCTAACTGAGGACCAGCTTGGGTTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479356.1
CDS-3UTR CAA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTATCATGATGGACTGGTaGGTTCGACCGCTGGCGATG +
Preference number: 5 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTIMMDW*VRPLAM
Trigger: CATCGCCAGCGGTCGAACCAACCAGTCCATCATGAT...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTTCGTACCGCCTGTGCTaGTTCAGGTTGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GIRKYQVDGKILATGCGFSYRLC*FRLSSS
Trigger: CGAGCTGGACAACCTGAACAAGCACAGGCGGTACGA...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGGCCTCCAGATGAGGTCGTTGTATTaGGTGACATCCTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: WTSRSFFFPRPRLPGGLQMRSLY*VTSSSE
Trigger: CTCGGATGAGGATGTCACCAAATACAACGACCTCAT...CTGGAGGCCGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCGCCCCCGCTGTGTCCTaGTTTCCTCTAAATCACGGC +
Preference number: 5 (lower is better)
Translates to: FSLNPGIRKYQVDGKILAAPAVS*FPLNHG
Trigger: GCCGTGATTTAGAGGAAACAAGGACACAGCGGGGGC...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 90 bp GTGAACTTCTTCAGGCCAGACACGAAGCCCACGTGGATGCTGTCTTaGAAGTTAGGCCGGGCGGTCACCATGGTAACCTCCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: VNFFRPDTKPTWMLS*KLGRAVTMVTSSSC
Trigger: ACAGGAAGAGGAGGTTACCATGGTGACCGCCCGGCCTAACTTTCAAGACAGCATCCACGTGGGCTTCGTGTCTGGCCTGAAGAAGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS-3UTR CAA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTCGCACAGGCTCTGTCTaGAAATACGGGGACACATCA +
Preference number: 5 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGRTGSV*KYGDTS
Trigger: TGATGTGTCCCCGTATTTCAAGACAGAGCCTGTGCG...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTTGGTCAGCTCCCTGTaGTTGTGGAGCCACTTGAAC +
Preference number: 5 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISLVSSL*LWSHLN
Trigger: GTTCAAGTGGCTCCACAACAACAGGGAGCTGACCAA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GATGAGGCTGTCCGATGCCTGCCAGCCACAGTGATGGTGCATGGAGGGAAGGAGCAAATGATATGTAGCTaGATCAGGGGCCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: DEAVRCLPATVMVHGGKEQMICS*IRGLAL
Trigger: CAATGCCAGGCCCCTGATCAAGCTACATATCATTTG...CTCCTTCCCTCCATGCACCATCACTGTGGCTGGCAGGCATCGGACAGCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTCCGCTCCCGATGGCGTaGAAGGCCTGGACCTGGACG +
Preference number: 5 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLPLPMA*KAWTWT
Trigger: CGTCCAGGTCCAGGCCTTCAACGCCATCGGGAGCGG...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTGCTTCTCCCCAGCCCTaGCGGGTCTGGGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLASPQP*RVWAVM
Trigger: CATCACGGCCCAGACCCGCAAGGGCTGGGGAGAAGC...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATAATGAAGCTGGAGGCATaGTGGCTCACGGAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIMKLEA*WLTEAE
Trigger: CTCGGCCTCCGTGAGCCACAATGCCTCCAGCTTCAT...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCCTGTCGCCAATGTCATaGGTCGCCTTCACTCGGAAC +
Preference number: 5 (lower is better)
Translates to: FSLNPGIRKYQVDGKILALSPMS*VAFTRN
Trigger: GTTCCGAGTGAAGGCGACCAATGACATTGGCGACAG...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTCCCAGGAGGATGCCATaGATCTTGTCCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGPRRMP*ILSSAG
Trigger: GCCAGCAGAGGACAAGATCAATGGCATCCTCCTGGG...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AGGTGGTGGTCAGGATTGCCATGTGCGCATGCCCATGGGTGTCCCTGGATAGGGATGAGGTCGTTGTATTaGGTGACATCCTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: RWWSGLPCAHAHGCPWIGMRSLY*VTSSSE
Trigger: CTCGGATGAGGATGTCACCAAATACAACGACCTCAT...CCCTATCCAGGGACACCCATGGGCATGCGCACATGGCAATCCTGACCACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TCAGGAAAAACTCATGGCTGGGTGTGCCCGTTCTTTGGGCCCCAGACCCTGACTAGCTATTCTTGTCACTaGGTCCCATCTGACCTGCCC +
Preference number: 5 (lower is better)
Translates to: SGKTHGWVCPFFGPQTLTSYSCH*VPSDLP
Trigger: GGGCAGGTCAGATGGGACCAAGTGACAAGAATAGCT...AGTCAGGGTCTGGGGCCCAAAGAACGGGCACACCCAGCCATGAGTTTTTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 90 bp AATTTCAGGCTTGACAGGAGAGGCTGGTACGATTATAGCAGCCACTaGGACAGCCATGATGGCAGAGACAGGGCTTCGAGAGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: NFRLDRRGWYDYSSH*DSHDGRDRASRGSQ
Trigger: CTGGCTGCCTCTCGAAGCCCTGTCTCTGCCATCATGGCTGTCTCAGTGGCTGCTATAATCGTACCAGCCTCTCCTGTCAAGCCTGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479356.1
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACACGTGGATGCTGTCTaGAAAGTTAGGCCGGGCGGT +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIHVDAV*KVRPGG
Trigger: ACCGCCCGGCCTAACTTTCAAGACAGCATCCACGTG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTGTGGCCCCTGGGTTGTaGATGCCTCGAAGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCVAPGL*MPRSVK
Trigger: CTTCACGCTTCGAGGCATCAACAACCCAGGGGCCAC...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCCTAGGGCTCCAGACTaGGCACTGTTCCCCGAGTCT +
Preference number: 5 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCPRAPD*ALFPES
Trigger: AGACTCGGGGAACAGTGCCAAGTCTGGAGCCCTAGG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCACTCTGGACCAGGGACTaGGGCCACCCCTCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPLWTRD*GHPSGL
Trigger: GAGCCCAGAGGGGTGGCCCAAGTCCCTGGTCCAGAG...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTACTGGATGTGGCTTTTaGCAGAACACTCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISTGCGF*QNTPWS
Trigger: GCTCCAAGGAGTGTTCTGCAAAAAGCCACATCCAGT...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CCCACTCTTTCTACAAAGGGCAGGGCCCACCACCCCTTTCTAATGTGGCCAGGTTCCCAGGCCTCCTTATaGGAGAAACCGCTTTTTGGA +
Preference number: 5 (lower is better)
Translates to: PTLSTKGRAHHPFLMWPGSQASL*EKPLFG
Trigger: TCCAAAAAGCGGTTTCTCCAATAAGGAGGCCTGGGA...ACCTGGCCACATTAGAAAGGGGTGGTGGGCCCTGCCCTTTGTAGAAAGAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 90 bp GTCACTGATGTAGTGGTTGACAAAGGAGTGGGCCTTCTGGTGGTTTaGGTCGACCTCGTACTCGCTGTCACTTCCCTGAGAGTCGGAGAT +
Preference number: 5 (lower is better)
Translates to: VTDVVVDKGVGLLVV*VDLVLAVTSLRVGD
Trigger: ATCTCCGACTCTCAGGGAAGTGACAGCGAGTACGAGGTCGACTCAAACCACCAGAAGGCCCACTCCTTTGTCAACCACTACATCAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCAGGTAGGTGGAAGTTaGCACCTCGCCGGCTGCATT +
Preference number: 5 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCQVGGS*HLAGCI
Trigger: AATGCAGCCGGCGAGGTGCAAACTTCCACCTACCTG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTCCTTTCCCCACGTCGTaGACGGCACAAAGACGGAAC +
Preference number: 5 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCPFPTS*TAQRRN
Trigger: GTTCCGTCTTTGTGCCGTCAACGACGTGGGGAAAGG...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATACCCGAGTCTGTCTTCTaGGCGTACTTCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIPESVF*AYFLLW
Trigger: CCAGAGCAAGAAGTACGCCAAGAAGACAGACTCGGG...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000424778.1
CDS-3UTR CAA 90 bp TTCTCCCTAAACCCTGGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCTCCCAAATCTCCTACTaGGGCTTCCTTGAACTCTGC +
Preference number: 5 (lower is better)
Translates to: FSLNPGIRKYQVDGKILASQISY*GFLELC
Trigger: GCAGAGTTCAAGGAAGCCCAAGTAGGAGATTTGGGA...GGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCCAGGGTTTAGGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CAGCTGGCTGGACATCCAGAAGCTTTTTCTTCCCTCGGCCACGCCTGCCTGGCGAGGACACGGGACTTCTaGTGGTATATATTTCAAATC +
Preference number: 5 (lower is better)
Translates to: QLAGHPEAFSSLGHACLARTRDF*WYIFQI
Trigger: GATTTGAAATATATACCACAAGAAGTCCCGTGTCCT...CGCCAGGCAGGCGTGGCCGAGGGAAGAAAAAGCTTCTGGATGTCCAGCCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGTGTGTACAGTCCAGGGGGCATaGTTCTCCGACATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: FWRGSLDPVPCKCMGDVCTVQGA*FSDISR
Trigger: TCTGGAGATGTCGGAGAACAATGCCCCCTGGACTGT...ACACACATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TCCCTCACTGGGCTGGGCTTAAATAATTCCCTAATGCAAACTGGGAACTTCCTTCGGATGGTCGTGGAATaGGTGGCTTCCGCGTGCACA +
Preference number: 5 (lower is better)
Translates to: SLTGLGLNNSLMQTGNFLRMVVE*VASACT
Trigger: TGTGCACGCGGAAGCCACCAATTCCACGACCATCCG...AAGGAAGTTCCCAGTTTGCATTAGGGAATTATTTAAGCCCAGCCCAGTGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATAAGGGCCCAGATGAGTTaGTTCTGGAGAGGATCCCTA +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIRAQMS*FWRGSL
Trigger: TAGGGATCCTCTCCAGAACAAACTCATCTGGGCCCT...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp CTCACGGTTTTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTTTTGCAGAACACTCCTaGGAGCAGATTGTGTATGTG +
Preference number: 5 (lower is better)
Translates to: LTVFSLLLNAGFAGPGISFAEHS*EQIVYV
Trigger: CACATACACAATCTGCTCCAAGGAGTGTTCTGCAAA...AGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAAAACCGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TTCTCCCTCCTTCTGAACGCCGGCTTTGCTGGCCCTGGAATCTCTGGAAAAATATATTCCAGGGAGAACTaGGTCAGCTCCCTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: FSLLLNAGFAGPGISGKIYSREN*VSSLLL
Trigger: CAACAACAGGGAGCTGACCAAGTTCTCCCTGGAATA...TATTTTTCCAGAGATTCCAGGGCCAGCAAAGCCGGCGTTCAGAAGGAGGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATACCCTCTCGGTGTCTTaGCTGAACTGTCCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDTLSVS*LNCPFP
Trigger: GGGGAAAGGACAGTTCAGCAAAGACACCGAGAGGGT...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AGTTTGTTCTGGAGAGGATCCCTAGACCCTGTTCCTTGTAAGTGCATGGGAGATGCAGAACCTCAGCCCTaGGTTCTCCTTTGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: SLFWRGSLDPVPCKCMGDAEPQP*VLLWGR
Trigger: TCTTCCCCAAAGGAGAACCAAGGGCTGAGGTTCTGC...ATCTCCCATGCACTTACAAGGAACAGGGTCTAGGGATCCTCTCCAGAACAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp ACCTTTCCTTGTCCATGCTCAGGAAAGTCAATTCCAGCACAGGGAGGCAGGGGTCCTGATCTCATGGGCTaGTCTAAATTTGCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: TFPCPCSGKSIPAQGGRGPDLMG*SKFAWC
Trigger: ACACCACGCAAATTTAGACAAGCCCATGAGATCAGG...ACCCCTGCCTCCCTGTGCTGGAATTGACTTTCCTGAGCATGGACAAGGAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGACGGCAGTGCCAGGTTaGGGGGTAGGAGTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRTAVPG*GVGVLG
Trigger: CCCCAAAACTCCTACCCCCAAACCTGGCACTGCCGT...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp TCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAAGGGCAGGAACCAGGCCCTaGACTGTCACTGAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: SFLSCPQCVKPNHPTVPRAGTRP*TVTEVA
Trigger: AGCTACCTCAGTGACAGTCAAGGGCCTGGTTCCTGC...CCTTGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GGCATCCGTAAGTACCAAGTGGACGGGAAGATCCTGGCCACTGGATGTGGCTTTAGTTCAGGAGTCTCTTaGCTAACACACATACAGATG +
Preference number: 5 (lower is better)
Translates to: GIRKYQVDGKILATGCGFSSGVS*LTHIQM
Trigger: CATCTGTATGTGTGTTAGCAAAGAGACTCCTGAACT...AAAGCCACATCCAGTGGCCAGGATCTTCCCGTCCACTTGGTACTTACGGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATGAGCGGGGGCCGATGTaGGAAATGCCCAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNERGPM*EMPRLV
Trigger: CACCAACCTGGGCATTTCCAACATCGGCCCCCGCTC...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCATGGGCTTGTCTAAATTaGCGTGGTGTCCTCACCCTC +
Preference number: 5 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPWACLN*RGVLTL
Trigger: GAGGGTGAGGACACCACGCAAATTTAGACAAGCCCA...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGCCCAGAGCATCTTTTaGGTTTGTCTTGGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPAQSIF*VCLGSV
Trigger: CACACTGCCAAGACAAACCAAAAAGATGCTCTGGGC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATTTGGTCCACGTCAGGTaGATGGCTCGCCTTTCCACG +
Preference number: 5 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNLVHVR*MARLST
Trigger: CGTGGAAAGGCGAGCCATCAACCTGACGTGGACCAA...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCCTACTTGGGCTTCCTaGAACTCTGCTCACCCACCC +
Preference number: 5 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNPTWAS*NSAHPP
Trigger: GGGTGGGTGAGCAGAGTTCAAGGAAGCCCAAGTAGG...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp GTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATCATCCCACAGTGCCAGAGCATCTTTTTGGTTaGTCTTGGCAGTGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: VSFLSCPQCVKPNHPTVPEHLFG*SWQCGC
Trigger: ACACCCACACTGCCAAGACAAACCAAAAAGATGCTC...TGGCACTGTGGGATGATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGCCCGAGTCTGTCTTCTaGGCGTACTTCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQPESVF*AYFLLW
Trigger: CCAGAGCAAGAAGTACGCCAAGAAGACAGACTCGGG...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AAGAGAACAGTCAAAGTGTCATTCTTATCTTGCCCACAATGCGTTAAACCTAATGGATGCCCATTCTTTTaGCAGAGAGCAGCGGCAGTG +
Preference number: 5 (lower is better)
Translates to: KRTVKVSFLSCPQCVKPNGCPFF*QRAAAV
Trigger: CACTGCCGCTGCTCTCTGCAAAAAGAATGGGCATCC...ATTAGGTTTAACGCATTGTGGGCAAGATAAGAATGACACTTTGACTGTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS-3UTR CAA 90 bp AATAATTCCCTAATGCAAACTGGGAACTTCCTTAAATGGTTAAATGCTCAGCAGCCAGATGAGTGGGTATaGACTAAGTGTGGGACTTTC +
Preference number: 5 (lower is better)
Translates to: NNSLMQTGNFLKWLNAQQPDEWV*TKCGTF
Trigger: GAAAGTCCCACACTTAGTCAATACCCACTCATCTGG...CTGCTGAGCATTTAACCATTTAAGGAAGTTCCCAGTTTGCATTAGGGAATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS CCA 72 bp CGGGATCTTGCGGCCGTCCCGGAACCAGGTCACCTGTaGCTGGGGGAAGCTGGCGATGCGCGGGGCACGGAT +
Preference number: 6 (lower is better)
Translates to: RDLAAVPEPGHL*LGEAGDARGTD
Trigger: ATCCGTGCCCCGCGCATCGCCAGCTTCCCCCAGCCACAGGTGACCTGGTTCCGGGACGGCCGCAAGATCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 72 bp GCTGTGGGGTCTCAGCCCAGCAGGGCGGGGCGCACCTaGAGGTCTGGCCTCGATGACGTAGCGGGTGATGGG +
Preference number: 6 (lower is better)
Translates to: AVGSQPSRAGRT*RSGLDDVAGDG
Trigger: CCCATCACCCGCTACGTCATCGAGGCCAGACCTTCAGGTGCGCCCCGCCCTGCTGGGCTGAGACCCCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479356.1
CDS GCA 72 bp GCTCGCCTTTCCACGGTGCTGAGAGTGGCCACTGGGTaGTCGGGCGCGTGGGGCAGTTGCCTGACTCGCAGG +
Preference number: 6 (lower is better)
Translates to: ARLSTVLRVATG*SGAWGSCLTRR
Trigger: CCTGCGAGTCAGGCAACTGCCCCACGCGCCCGAGCACCCAGTGGCCACTCTCAGCACCGTGGAAAGGCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 72 bp GCTGGAGGCATTGTGGCTCACGGAGGCCGAGTGCAGTaGCCACCTGCCGCTGGGCAGCTCGCGGGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: AGGIVAHGGRVQ*PPAAGQLAGLD
Trigger: ATCCAGACCCGCGAGCTGCCCAGCGGCAGGTGGGCACTGCACTCGGCCTCCGTGAGCCACAATGCCTCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GGGCGGCAGGGGGCTGCCAGATCAGCCGCACAGACGTaGTCCGCACCTCTGGGAACAGGATGCCCATGGGTG +
Preference number: 6 (lower is better)
Translates to: GRQGAARSAAQT*SAPLGTGCPWV
Trigger: CACCCATGGGCATCCTGTTCCCAGAGGTGCGGACCACGTCTGTGCGGCTGATCTGGCAGCCCCCTGCCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GGCTCACGGAGGCCGAGTGCAGTGCCCACCTGCCGCTaGGCAGCTCGCGGGTCTGGATGGTGTAGTAGCGCA +
Preference number: 6 (lower is better)
Translates to: GSRRPSAVPTCR*AARGSGWCSSA
Trigger: TGCGCTACTACACCATCCAGACCCGCGAGCTGCCCAGCGGCAGGTGGGCACTGCACTCGGCCTCCGTGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 72 bp TCGGGCACCAGGCCGCTGATCTGCAGGCCCCCGTCGTaGCGCTGCCGGAAGCGGGTCAACTTCTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: SGTRPLICRPPS*RCRKRVNFSTS
Trigger: GGAGGTGGAGAAGTTGACCCGCTTCCGGCAGCGCAACGACGGGGGCCTGCAGATCAGCGGCCTGGTGCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS TCA 72 bp GTGGCTGGGGGAAGCTGGCGATGCGCGGGGCACGGATaGCAGCTGCTTCTCCGTGGGAGACGCTCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: VAGGSWRCAGHG*QLLLRGRRSGA
Trigger: AGCACCAGAGCGTCTCCCACGGAGAAGCAGCTGTCATCCGTGCCCCGCGCATCGCCAGCTTCCCCCAGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 72 bp CCACCGTCTGGCTCCAGGGCCCGCTCCCGATGGCGTTaGAGGCCTGGACCTGGACGCGGTACTCTGTCCACT +
Preference number: 6 (lower is better)
Translates to: PPSGSRARSRWR*RPGPGRGTLST
Trigger: AGTGGACAGAGTACCGCGTCCAGGTCCAGGCCTTCAACGCCATCGGGAGCGGGCCCTGGAGCCAGACGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS GCA 72 bp GCCGCTGCAGCAGGGCCCCCATTCGGTTCCGCACGATaGAACGGTAAAAGCCAGCGTGGGTGCGGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: AAAAGPPFGSAR*NGKSQRGCGPG
Trigger: GCCTGGACCGCACCCACGCTGGCTTTTACCGTTGCATCGTGCGGAACCGAATGGGGGCCCTGCTGCAGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS GCA 72 bp AACATGCCGGTATCATCGGGCACCAGGCCGCTGATCTaGAGGCCCCCGTCGTTGCGCTGCCGGAAGCGGGTC +
Preference number: 6 (lower is better)
Translates to: NMPVSSGTRPLI*RPPSLRCRKRV
Trigger: GACCCGCTTCCGGCAGCGCAACGACGGGGGCCTGCAGATCAGCGGCCTGGTGCCCGATGATACCGGCATGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 72 bp ATCTTGCGGCCGTCCCGGAACCAGGTCACCTGTGGCTaGGGGAAGCTGGCGATGCGCGGGGCACGGATGACA +
Preference number: 6 (lower is better)
Translates to: ILRPSRNQVTCG*GKLAMRGARMT
Trigger: TGTCATCCGTGCCCCGCGCATCGCCAGCTTCCCCCAGCCACAGGTGACCTGGTTCCGGGACGGCCGCAAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS CCA 72 bp GATGGCTCGCCTTTCCACGGTGCTGAGAGTGGCCACTaGGTGCTCGGGCGCGTGGGGCAGTTGCCTGACTCG +
Preference number: 6 (lower is better)
Translates to: DGSPFHGAESGH*VLGRVGQLPDS
Trigger: CGAGTCAGGCAACTGCCCCACGCGCCCGAGCACCCAGTGGCCACTCTCAGCACCGTGGAAAGGCGAGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 72 bp CCTCGGGGACCTCGCTCCAGCGCACCAGCATGCTGCTaGAGGTGGTGGCCAGTGCAGACACATTGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: PRGPRSSAPACC*RWWPVQTHWWG
Trigger: GCCCCACCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCTGGAGCGAGGTCCCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp CCAGCGGAGGTGGCTCCCAAGTCACGTCCAGCTGTGTaGCCGTGGCGCCGTGGACGACCACGTTACGAGGTG +
Preference number: 6 (lower is better)
Translates to: PAEVAPKSRPAV*PWRRGRPRYEV
Trigger: CACCTCGTAACGTGGTCGTCCACGGCGCCACGGCCACACAGCTGGACGTGACTTGGGAGCCACCTCCGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 72 bp TCCAGCGTGATGGCTATGCGGCTGCTGGGCGGGATCTaGCGGCCGTCCCGGAACCAGGTCACCTGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: SSVMAMRLLGGI*RPSRNQVTCGW
Trigger: CCAGCCACAGGTGACCTGGTTCCGGGACGGCCGCAAGATCCCGCCCAGCAGCCGCATAGCCATCACGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS CAA 72 bp ACCACCGTCTGGCTCCAGGGCCCGCTCCCGATGGCGTaGAAGGCCTGGACCTGGACGCGGTACTCTGTCCAC +
Preference number: 6 (lower is better)
Translates to: TTVWLQGPLPMA*KAWTWTRYSVH
Trigger: GTGGACAGAGTACCGCGTCCAGGTCCAGGCCTTCAACGCCATCGGGAGCGGGCCCTGGAGCCAGACGGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS TCA 72 bp ACTGGAACATGCCGGTATCATCGGGCACCAGGCCGCTaGTCTGCAGGCCCCCGTCGTTGCGCTGCCGGAAGC +
Preference number: 6 (lower is better)
Translates to: TGTCRYHRAPGR*SAGPRRCAAGS
Trigger: GCTTCCGGCAGCGCAACGACGGGGGCCTGCAGATCAGCGGCCTGGTGCCCGATGATACCGGCATGTTCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 72 bp GGGGAAGCTGGCGATGCGCGGGGCACGGATGACAGCTaGTTCTCCGTGGGAGACGCTCTGGTGCTTCTCACC +
Preference number: 6 (lower is better)
Translates to: GEAGDARGTDDS*FSVGDALVLLT
Trigger: GGTGAGAAGCACCAGAGCGTCTCCCACGGAGAAGCAGCTGTCATCCGTGCCCCGCGCATCGCCAGCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS GCA 72 bp AGAGGTAGGCGCCCCGGACAACAGAGGGGACGCTGCTaGTGCGCAGGACAGCCTCACACTCGTAGTAGCCGG +
Preference number: 6 (lower is better)
Translates to: RGRRPGQQRGRC*CAGQPHTRSSR
Trigger: CCGGCTACTACGAGTGTGAGGCTGTCCTGCGCAGCAGCAGCGTCCCCTCTGTTGTCCGGGGCGCCTACCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS GCA 72 bp CAGCCTCGGGGACCTCGCTCCAGCGCACCAGCATGCTaGTGGAGGTGGTGGCCAGTGCAGACACATTGGTGG +
Preference number: 6 (lower is better)
Translates to: QPRGPRSSAPAC*WRWWPVQTHWW
Trigger: CCACCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCTGGAGCGAGGTCCCCGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS GCA 72 bp CATTGTGGCTCACGGAGGCCGAGTGCAGTGCCCACCTaGCGCTGGGCAGCTCGCGGGTCTGGATGGTGTAGT +
Preference number: 6 (lower is better)
Translates to: HCGSRRPSAVPT*RWAARGSGWCS
Trigger: ACTACACCATCCAGACCCGCGAGCTGCCCAGCGGCAGGTGGGCACTGCACTCGGCCTCCGTGAGCCACAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GCCCTGGGAGTTCTGGGGGCACCCCAGAGGAGATGGTaGAGGCGGACACTTGGCCCTGGCCCTTTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: ALGVLGAPQRRW*RRTLGPGPLRS
Trigger: TGACCTCAAAGGGCCAGGGCCAAGTGTCCGCCTCCACCATCTCCTCTGGGGTGCCCCCAGAACTCCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp CCTCGCTCCAGCGCACCAGCATGCTGCTGGAGGTGGTaGCCAGTGCAGACACATTGGTGGGGCCGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: PRSSAPACCWRW*PVQTHWWGRKR
Trigger: CCTCTTCCGGCCCCACCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCTGGAGCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GGACCTCGCTCCAGCGCACCAGCATGCTGCTGGAGGTaGTGGCCAGTGCAGACACATTGGTGGGGCCGGAAG +
Preference number: 6 (lower is better)
Translates to: GPRSSAPACCWR*WPVQTHWWGRK
Trigger: CTTCCGGCCCCACCAATGTGTCTGCACTGGCCACCACCTCCAGCAGCATGCTGGTGCGCTGGAGCGAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp CCTCTGCTGGCGGCTGCCATCGGATTAGCACGGAGGTaGTGGTGTGGGGCGTCACGGAGAGGATGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: PLLAAAIGLARR*WCGASRRGWWV
Trigger: CACCCACCATCCTCTCCGTGACGCCCCACACCACCACCTCCGTGCTAATCCGATGGCAGCCGCCAGCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GAGGTGGCTCCCAAGTCACGTCCAGCTGTGTGGCCGTaGCGCCGTGGACGACCACGTTACGAGGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: EVAPKSRPAVWP*RRGRPRYEVLL
Trigger: CAGCAGCACCTCGTAACGTGGTCGTCCACGGCGCCACGGCCACACAGCTGGACGTGACTTGGGAGCCACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS TCA 72 bp TCTCCACCTCCACCACGGCTGCGTCCTTGTACCAGGTaGTGGAGGGCGGCGGCACACCTTTGGCCTGACAGG +
Preference number: 6 (lower is better)
Translates to: SPPPPRLRPCTR*WRAAAHLWPDR
Trigger: CCTGTCAGGCCAAAGGTGTGCCGCCGCCCTCCATCACCTGGTACAAGGACGCAGCCGTGGTGGAGGTGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 72 bp CTGAGAGGTAGGCGCCCCGGACAACAGAGGGGACGCTaGTGCTGCGCAGGACAGCCTCACACTCGTAGTAGC +
Preference number: 6 (lower is better)
Translates to: LRGRRPGQQRGR*CCAGQPHTRSS
Trigger: GCTACTACGAGTGTGAGGCTGTCCTGCGCAGCAGCAGCGTCCCCTCTGTTGTCCGGGGCGCCTACCTCTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS GCA 72 bp GGATGGTCGTGGAATTGGTGGCTTCCGCGTGCACATTaGCCGGAGGGACCGTGGGAACTCCCTGCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: GWSWNWWLPRAH*PEGPWELPAAS
Trigger: GGACGCTGCAGGGAGTTCCCACGGTCCCTCCGGGCAATGTGCACGCGGAAGCCACCAATTCCACGACCATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 72 bp CTCACCCGAGTCGCTCTCCGTGTAGCTGTAGGCCTGTaGCCTCGAGATGCCCTTCTGCTGTCGCCGCCACGA +
Preference number: 6 (lower is better)
Translates to: LTRVALRVAVGL*PRDALLLSPPR
Trigger: TCGTGGCGGCGACAGCAGAAGGGCATCTCGAGGGCACAGGCCTACAGCTACACGGAGAGCGACTCGGGTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS CCA 72 bp ACCCCAGAGGAGATGGTGGAGGCGGACACTTGGCCCTaGCCCTTTGAGGTCATGGCGGCCACCTCGATGGTG +
Preference number: 6 (lower is better)
Translates to: TPEEMVEADTWP*PFEVMAATSMV
Trigger: CACCATCGAGGTGGCCGCCATGACCTCAAAGGGCCAGGGCCAAGTGTCCGCCTCCACCATCTCCTCTGGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GGTCTGGGCCGTGATGCGGAACAGGTAGACAGACTCTaGCTTGAGGCCCGTGGCTGTGTACTGCCGGGCGCT +
Preference number: 6 (lower is better)
Translates to: GLGRDAEQVDRL*LEARGCVLPGA
Trigger: AGCGCCCGGCAGTACACAGCCACGGGCCTCAAGCCAGAGTCTGTCTACCTGTTCCGCATCACGGCCCAGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GTGCTCTCACATCCTCCTGCTGCACCATCGGCCTGCTaGGGGGCTGCGGACGGTCTCTCTTCTCGGTGGTCA +
Preference number: 6 (lower is better)
Translates to: VLSHPPAAPSAC*GAADGLSSRWS
Trigger: TGACCACCGAGAAGAGAGACCGTCCGCAGCCCCCCAGCAGGCCGATGGTGCAGCAGGAGGATGTGAGAGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GGCGGCTGCCATCGGATTAGCACGGAGGTGGTGGTGTaGGGCGTCACGGAGAGGATGGTGGGTGCTTCATCG +
Preference number: 6 (lower is better)
Translates to: GGCHRISTEVVV*GVTERMVGASS
Trigger: CGATGAAGCACCCACCATCCTCTCCGTGACGCCCCACACCACCACCTCCGTGCTAATCCGATGGCAGCCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp CTGCTGGCGGCTGCCATCGGATTAGCACGGAGGTGGTaGTGTGGGGCGTCACGGAGAGGATGGTGGGTGCTT +
Preference number: 6 (lower is better)
Translates to: LLAAAIGLARRW*CGASRRGWWVL
Trigger: AAGCACCCACCATCCTCTCCGTGACGCCCCACACCACCACCTCCGTGCTAATCCGATGGCAGCCGCCAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp TCCCAAGTCACGTCCAGCTGTGTGGCCGTGGCGCCGTaGACGACCACGTTACGAGGTGCTGCTGTGGGCACT +
Preference number: 6 (lower is better)
Translates to: SQVTSSCVAVAP*TTTLRGAAVGT
Trigger: AGTGCCCACAGCAGCACCTCGTAACGTGGTCGTCCACGGCGCCACGGCCACACAGCTGGACGTGACTTGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 72 bp CTCAAAGCTCCCCATGTAGGCCACCTGGACCTCGGTTaGCCGCTGCAGCAGGGCCCCCATTCGGTTCCGCAC +
Preference number: 6 (lower is better)
Translates to: LKAPHVGHLDLG*PLQQGPHSVPH
Trigger: GTGCGGAACCGAATGGGGGCCCTGCTGCAGCGGCAAACCGAGGTCCAGGTGGCCTACATGGGGAGCTTTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS CAA 72 bp CGGATGGTCGTGGAATTGGTGGCTTCCGCGTGCACATaGCCCGGAGGGACCGTGGGAACTCCCTGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: RMVVELVASACT*PGGTVGTPCSV
Trigger: GACGCTGCAGGGAGTTCCCACGGTCCCTCCGGGCAATGTGCACGCGGAAGCCACCAATTCCACGACCATCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CAA 90 bp GCGTGGGGCAGTTGCCTGACTCGCAGGTGGGCACTGCGAGAGTCGTaGCCTCCTGCTGAGATCACCCGGCAGGTGTACGTGCCGATGTCT +
Preference number: 6 (lower is better)
Translates to: AWGSCLTRRWALRES*PPAEITRQVYVPMS
Trigger: AGACATCGGCACGTACACCTGCCGGGTGATCTCAGCAGGAGGCAACGACTCTCGCAGTGCCCACCTGCGAGTCAGGCAACTGCCCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CAA 90 bp CAGGTGAAGCGGATGGTCGTGGAATTGGTGGCTTCCGCGTGCACATaGCCCGGAGGGACCGTGGGAACTCCCTGCAGCGTCCACTCGGTG +
Preference number: 6 (lower is better)
Translates to: QVKRMVVELVASACT*PGGTVGTPCSVHSV
Trigger: CACCGAGTGGACGCTGCAGGGAGTTCCCACGGTCCCTCCGGGCAATGTGCACGCGGAAGCCACCAATTCCACGACCATCCGCTTCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS TCA 72 bp TCGCAGGTGGGCACTGCGAGAGTCGTTGCCTCCTGCTaGGATCACCCGGCAGGTGTACGTGCCGATGTCTCC +
Preference number: 6 (lower is better)
Translates to: SQVGTARVVASC*DHPAGVRADVS
Trigger: GGAGACATCGGCACGTACACCTGCCGGGTGATCTCAGCAGGAGGCAACGACTCTCGCAGTGCCCACCTGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS TCA 72 bp GAGGGACCGTGGGAACTCCCTGCAGCGTCCACTCGGTaGCTTTACTGCTGTAGACCCCCAGCCCAGCGCTGT +
Preference number: 6 (lower is better)
Translates to: EGPWELPAASTR*LYCCRPPAQRC
Trigger: ACAGCGCTGGGCTGGGGGTCTACAGCAGTAAAGTCACCGAGTGGACGCTGCAGGGAGTTCCCACGGTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 72 bp CGTTTCTGTCCAGGCGGATACGAGGATGGCTCTCCGTaGCCAGGGTGGCCCCGTCCTTCTCCCAGATGTACC +
Preference number: 6 (lower is better)
Translates to: RFCPGGYEDGSP*PGWPRPSPRCT
Trigger: GGTACATCTGGGAGAAGGACGGGGCCACCCTGGGCACGGAGAGCCATCCTCGTATCCGCCTGGACAGAAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 72 bp GTGAAGCGGATGGTCGTGGAATTGGTGGCTTCCGCGTaGACATTGCCCGGAGGGACCGTGGGAACTCCCTGC +
Preference number: 6 (lower is better)
Translates to: VKRMVVELVASA*TLPGGTVGTPC
Trigger: GCAGGGAGTTCCCACGGTCCCTCCGGGCAATGTGCACGCGGAAGCCACCAATTCCACGACCATCCGCTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 72 bp GGTCGGGCACCTCCATGGAGCGGGCATCGGGCTCATTaGAGAGCTGGTGGATCAGCAACCACTCCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: GRAPPWSGHRAH*RAGGSATTPLP
Trigger: AGGGAGAGGAGTGGTTGCTGATCCACCAGCTCTCCAATGAGCCCGATGCCCGCTCCATGGAGGTGCCCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp CAGACGTGGTCCGCACCTCTGGGAACAGGATGCCCATaGGTGGTCCTGGGACATCATCCAGCGTCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: QTWSAPLGTGCP*VVLGHHPASAP
Trigger: TGGAGCGGACGCTGGATGATGTCCCAGGACCACCCATGGGCATCCTGTTCCCAGAGGTGCGGACCACGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp CTGCCAGATCAGCCGCACAGACGTGGTCCGCACCTCTaGGAACAGGATGCCCATGGGTGGTCCTGGGACATC +
Preference number: 6 (lower is better)
Translates to: LPDQPHRRGPHL*EQDAHGWSWDI
Trigger: GATGTCCCAGGACCACCCATGGGCATCCTGTTCCCAGAGGTGCGGACCACGTCTGTGCGGCTGATCTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GGCTTCAGCCTGTCCACAATGAAGCTGGAGGCATTGTaGCTCACGGAGGCCGAGTGCAGTGCCCACCTGCCG +
Preference number: 6 (lower is better)
Translates to: GFSLSTMKLEAL*LTEAECSAHLP
Trigger: CGGCAGGTGGGCACTGCACTCGGCCTCCGTGAGCCACAATGCCTCCAGCTTCATTGTGGACAGGCTGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp GTGGAGGGACCCAGGAAGAAGGGAGATAATGAGCTGTaGGGTCTCAGCCCAGCAGGGCGGGGCGCACCTGAA +
Preference number: 6 (lower is better)
Translates to: VEGPRKKGDNEL*GLSPAGRGAPE
Trigger: TTCAGGTGCGCCCCGCCCTGCTGGGCTGAGACCCCACAGCTCATTATCTCCCTTCTTCCTGGGTCCCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479356.1
CDS CAA 72 bp CGGGTCAACTTCTCCACCTCCACCACGGCTGCGTCCTaGTACCAGGTGATGGAGGGCGGCGGCACACCTTTG +
Preference number: 6 (lower is better)
Translates to: RVNFSTSTTAAS*YQVMEGGGTPL
Trigger: CAAAGGTGTGCCGCCGCCCTCCATCACCTGGTACAAGGACGCAGCCGTGGTGGAGGTGGAGAAGTTGACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CAA 72 bp AGGTCGGGCACCTCCATGGAGCGGGCATCGGGCTCATaGGAGAGCTGGTGGATCAGCAACCACTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: RSGTSMERASGS*ESWWISNHSSP
Trigger: GGGAGAGGAGTGGTTGCTGATCCACCAGCTCTCCAATGAGCCCGATGCCCGCTCCATGGAGGTGCCCGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 90 bp CGGATCAGGGGGCTGTTGCCATCAAAGGGCTTGGTCCACGTCAGGTaGATGGCTCGCCTTTCCACGGTGCTGAGAGTGGCCACTGGGTGC +
Preference number: 6 (lower is better)
Translates to: RIRGLLPSKGLVHVR*MARLSTVLRVATGC
Trigger: GCACCCAGTGGCCACTCTCAGCACCGTGGAAAGGCGAGCCATCAACCTGACGTGGACCAAGCCCTTTGATGGCAACAGCCCCCTGATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CAA 90 bp AGCACGTATTTGCCCAAGCCGGTGAGCTGGGCACTGCGAGACGAGTaGCCTTCCACCAGCCAGAATCGGGGCTGGGTGTCCGAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: STYLPKPVSWALRDE*PSTSQNRGWVSESF
Trigger: GAAGGACTCGGACACCCAGCCCCGATTCTGGCTGGTGGAAGGCAACTCGTCTCGCAGTGCCCAGCTCACCGGCTTGGGCAAATACGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS TCA 72 bp GTGATGGGCCCTTTGCCCGGGTCTCCGCTGGACCAGTaGATGGCGATGGCAGAGCTGTACCGCACGATGATG +
Preference number: 6 (lower is better)
Translates to: VMGPLPGSPLDQ*MAMAELYRTMM
Trigger: CATCATCGTGCGGTACAGCTCTGCCATCGCCATTCACTGGTCCAGCGGAGACCCGGGCAAAGGGCCCATCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
ENST00000479356.1
CDS GCA 72 bp TACCGCCTGTGCTTGTTCAGGTTGTCCAGCTCGTACTaGGTGAGGCTGGGCCGGCTCAGGTTCCGCATGGAG +
Preference number: 6 (lower is better)
Translates to: YRLCLFRLSSSY*VRLGRLRFRME
Trigger: CTCCATGCGGAACCTGAGCCGGCCCAGCCTCACGCAGTACGAGCTGGACAACCTGAACAAGCACAGGCGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 72 bp GCGATGCGCGGGGCACGGATGACAGCTGCTTCTCCGTaGGAGACGCTCTGGTGCTTCTCACCTTCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: AMRGARMTAASP*ETLWCFSPSSK
Trigger: CTTTGAGGAAGGTGAGAAGCACCAGAGCGTCTCCCACGGAGAAGCAGCTGTCATCCGTGCCCCGCGCATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS CCA 72 bp TTCTCCCAGATGTACCTGATGGTTACTCGGGGGTCGTaGGTCACTCCGCACACCATGGAGGCCTGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: FSQMYLMVTRGS*VTPHTMEAWVP
Trigger: GGGCACCCAGGCCTCCATGGTGTGCGGAGTGACCCACGACCCCCGAGTAACCATCAGGTACATCTGGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 72 bp CAGCCAGCGGGAGATGGAGGTTTTCCCATCGTAGCCTaGCCTGAACTGCAAGGTCACAGAGCGGGGGCCGAT +
Preference number: 6 (lower is better)
Translates to: QPAGDGGFPIVA*PELQGHRAGAD
Trigger: ATCGGCCCCCGCTCTGTGACCTTGCAGTTCAGGCCAGGCTACGATGGGAAAACCTCCATCTCCCGCTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CCA 72 bp TCCATGGAGCGGGCATCGGGCTCATTGGAGAGCTGGTaGATCAGCAACCACTCCTCTCCCTCCCCAACCACG +
Preference number: 6 (lower is better)
Translates to: SMERASGSLESW*ISNHSSPSPTT
Trigger: CGTGGTTGGGGAGGGAGAGGAGTGGTTGCTGATCCACCAGCTCTCCAATGAGCCCGATGCCCGCTCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 72 bp AGTTGCCTGACTCGCAGGTGGGCACTGCGAGAGTCGTaGCCTCCTGCTGAGATCACCCGGCAGGTGTACGTG +
Preference number: 6 (lower is better)
Translates to: SCLTRRWALRES*PPAEITRQVYV
Trigger: CACGTACACCTGCCGGGTGATCTCAGCAGGAGGCAACGACTCTCGCAGTGCCCACCTGCGAGTCAGGCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS TCA 72 bp GGGCCTGGCATTGGCCACACACTCCAAGGTAACCTCTaGGGTGCCGGCCACCACGCTGGTGTTTTTAGGTGG +
Preference number: 6 (lower is better)
Translates to: GPGIGHTLQGNL*GAGHHAGVFRW
Trigger: CCACCTAAAAACACCAGCGTGGTGGCCGGCACCTCAGAGGTTACCTTGGAGTGTGTGGCCAATGCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 72 bp GCCTGTGCTTGTTCAGGTTGTCCAGCTCGTACTGCGTaGGGCTGGGCCGGCTCAGGTTCCGCATGGAGTACA +
Preference number: 6 (lower is better)
Translates to: ACACSGCPARTA*GWAGSGSAWST
Trigger: TGTACTCCATGCGGAACCTGAGCCGGCCCAGCCTCACGCAGTACGAGCTGGACAACCTGAACAAGCACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 72 bp CGTTGCCTCCTGCTGAGATCACCCGGCAGGTGTACGTaGCGATGTCTCCCGACCACGTCTGTGAGATGTGCA +
Preference number: 6 (lower is better)
Translates to: RCLLLRSPGRCT*RCLPTTSVRCA
Trigger: TGCACATCTCACAGACGTGGTCGGGAGACATCGGCACGTACACCTGCCGGGTGATCTCAGCAGGAGGCAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS GCA 72 bp CCTTATACATCACCTTATAGCCCAGCACGAGCCCGTTaGGATCAGCCTCGGGGACCTCGCTCCAGCGCACCA +
Preference number: 6 (lower is better)
Translates to: PYTSPYSPARAR*DQPRGPRSSAP
Trigger: TGGTGCGCTGGAGCGAGGTCCCCGAGGCTGATCGCAACGGGCTCGTGCTGGGCTATAAGGTGATGTATAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 72 bp GGGCTGTTGCCATCAAAGGGCTTGGTCCACGTCAGGTaGATGGCTCGCCTTTCCACGGTGCTGAGAGTGGCC +
Preference number: 6 (lower is better)
Translates to: GLLPSKGLVHVR*MARLSTVLRVA
Trigger: GGCCACTCTCAGCACCGTGGAAAGGCGAGCCATCAACCTGACGTGGACCAAGCCCTTTGATGGCAACAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CAA 72 bp GCAGGAACCAGGCCCTTGACTGTCACTGAGGTAGCTTaGGGGTCCACACTGGCCAGGAGTACAGTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: AGTRPLTVTEVA*GSTLARSTVQG
Trigger: CCCCTGGACTGTACTCCTGGCCAGTGTGGACCCCAAAGCTACCTCAGTGACAGTCAAGGGCCTGGTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CAA 72 bp CGCTCCACACGGTCCTGCACCACGTGGCTCAGCGTCTaGCCATGCCCGTCTGACCGGCTGTACTTGATCTTA +
Preference number: 6 (lower is better)
Translates to: RSTRSCTTWLSV*PCPSDRLYLIL
Trigger: TAAGATCAAGTACAGCCGGTCAGACGGGCATGGCAAGACGCTGAGCCACGTGGTGCAGGACCGTGTGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 72 bp AAGGGCTTCAGCCTGTCCACAATGAAGCTGGAGGCATaGTGGCTCACGGAGGCCGAGTGCAGTGCCCACCTG +
Preference number: 6 (lower is better)
Translates to: KGFSLSTMKLEA*WLTEAECSAHL
Trigger: CAGGTGGGCACTGCACTCGGCCTCCGTGAGCCACAATGCCTCCAGCTTCATTGTGGACAGGCTGAAGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS TCA 72 bp GGGGACACATCATCTTGGGCTCTGGCCGCGCGGATCTaGTGCAGAGCTAGCAGTGTCCAGATCAAAAGCCCC +
Preference number: 6 (lower is better)
Translates to: GDTSSWALAARI*CRASSVQIKSP
Trigger: GGGGCTTTTGATCTGGACACTGCTAGCTCTGCATCAGATCCGCGCGGCCAGAGCCCAAGATGATGTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 72 bp CTGCACATAGTAGCGACCTGCGTCAGGGGCCACCGTTaGCAGGATGACAAGGGTGTTCTCCAGCGTGATGGC +
Preference number: 6 (lower is better)
Translates to: LHIVATCVRGHR*QDDKGVLQRDG
Trigger: GCCATCACGCTGGAGAACACCCTTGTCATCCTGTCAACGGTGGCCCCTGACGCAGGTCGCTACTATGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 72 bp GTAGGAGCGTGCAGGAACCAGGCCCTTGACTGTCACTaGGGTAGCTTTGGGGTCCACACTGGCCAGGAGTAC +
Preference number: 6 (lower is better)
Translates to: VGACRNQALDCH*GSFGVHTGQEY
Trigger: GTACTCCTGGCCAGTGTGGACCCCAAAGCTACCTCAGTGACAGTCAAGGGCCTGGTTCCTGCACGCTCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS TCA 72 bp CAGCCTGCAGGGTGGTCAGTGACTCCGACTCCTCGCTaGACTCGCTGTCGCCAATGTCATTGGTCGCCTTCA +
Preference number: 6 (lower is better)
Translates to: QPAGWSVTPTPR*TRCRQCHWSPS
Trigger: TGAAGGCGACCAATGACATTGGCGACAGCGAGTTCAGCGAGGAGTCGGAGTCACTGACCACCCTGCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS TCA 72 bp ACCCACGTGAGCCACGTGCTCAGGCTTCCGGCTTCCTaGGCAATCCTCAACCCAAGCTGGTCCTCAGTTAGC +
Preference number: 6 (lower is better)
Translates to: THVSHVLRLPAS*AILNPSWSSVS
Trigger: GCTAACTGAGGACCAGCTTGGGTTGAGGATTGCTCAGGAAGCCGGAAGCCTGAGCACGTGGCTCACGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479356.1
CDS CCA 72 bp ATTCCATTCTGGTGGCTCTCAGGAGGCGGCTGCCACTaGATCATGATGGACTGGTTGGTTCGACCGCTGGCG +
Preference number: 6 (lower is better)
Translates to: IPFWWLSGGGCH*IMMDWLVRPLA
Trigger: CGCCAGCGGTCGAACCAACCAGTCCATCATGATCCAGTGGCAGCCGCCTCCTGAGAGCCACCAGAATGGAAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 72 bp GGAGTACATGGAGGTAAGCTCAGCCCATGTGGCCCCTaGGTTGTTGATGCCTCGAAGCGTGAAGCCCCTCAG +
Preference number: 6 (lower is better)
Translates to: GVHGGKLSPCGP*VVDASKREAPQ
Trigger: CTGAGGGGCTTCACGCTTCGAGGCATCAACAACCCAGGGGCCACATGGGCTGAGCTTACCTCCATGTACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CAA 72 bp TCCCGGTATCGGATCCGGAAGCCCAGGAGGATGCCATaGATCTTGTCCTCTGCTGGCGGCTGCCATCGGATT +
Preference number: 6 (lower is better)
Translates to: SRYRIRKPRRMP*ILSSAGGCHRI
Trigger: AATCCGATGGCAGCCGCCAGCAGAGGACAAGATCAATGGCATCCTCCTGGGCTTCCGGATCCGATACCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 72 bp GACACATTCACTGAGGTTGTGGTCAGCTCACTGAACTaGACCGAGCTGGGAGCGCTGGGGGCTGCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: DTFTEVVVSSLN*TELGALGAACW
Trigger: CCAGCAAGCAGCCCCCAGCGCTCCCAGCTCGGTCAAGTTCAGTGAGCTGACCACAACCTCAGTGAATGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
ENST00000479356.1
CDS CAA 90 bp GGGGGAGACCTGGTGTACAGGCCGTTCTTTCGGCAGAAAGAGTTCTaGACGGAGAGCCGCCTGTTGTTGAGTTCCAGGGCAGGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: GGDLVYRPFFRQKEF*TESRLLLSSRAGKL
Trigger: CAGCTTCCCTGCCCTGGAACTCAACAACAGGCGGCTCTCCGTCAAGAACTCTTTCTGCCGAAAGAACGGCCTGTACACCAGGTCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS TCA 72 bp AGAACTTGGTCAGCTCCCTGTTGTTGTGGAGCCACTTaGACTCCAGTGGCCAGCTGCCCTCGGCCATGCATG +
Preference number: 6 (lower is better)
Translates to: RTWSAPCCCGAT*TPVASCPRPCM
Trigger: CATGCATGGCCGAGGGCAGCTGGCCACTGGAGTTCAAGTGGCTCCACAACAACAGGGAGCTGACCAAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000585283.1
CDS TCA 72 bp TTCAGGCCAGACACGAAGCCCACGTGGATGCTGTCTTaGAAGTTAGGCCGGGCGGTCACCATGGTAACCTCC +
Preference number: 6 (lower is better)
Translates to: FRPDTKPTWMLS*KLGRAVTMVTS
Trigger: GGAGGTTACCATGGTGACCGCCCGGCCTAACTTTCAAGACAGCATCCACGTGGGCTTCGTGTCTGGCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS TCA 72 bp CCTGGACTTCATAGAGCACGTATTTGCCCAAGCCGGTaGGCTGGGCACTGCGAGACGAGTTGCCTTCCACCA +
Preference number: 6 (lower is better)
Translates to: PGLHRARICPSR*AGHCETSCLPP
Trigger: TGGTGGAAGGCAACTCGTCTCGCAGTGCCCAGCTCACCGGCTTGGGCAAATACGTGCTCTATGAAGTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS TCA 72 bp GTACTCGCTGTCACTTCCCTGAGAGTCGGAGATTTCTaGGGGCTTCTCCGTCAGGCTGCTGCTCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VLAVTSLRVGDF*GLLRQAAALCR
Trigger: CCTGCAGAGAGCAGCAGCCTGACGGAGAAGCCCTCAGAAATCTCCGACTCTCAGGGAAGTGACAGCGAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS CCA 72 bp GGGAAGCTGCTTTCATCCAAGCTCATCATCTCGCTGTaGCCTAGGGCTCCAGACTTGGCACTGTTCCCCGAG +
Preference number: 6 (lower is better)
Translates to: GKLLSSKLIISL*PRAPDLALFPE
Trigger: CTCGGGGAACAGTGCCAAGTCTGGAGCCCTAGGCCACAGCGAGATGATGAGCTTGGATGAAAGCAGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS CCA 72 bp CTTGTTCAGGTAGGTAAGCTCAGCCCATGTGGCCCCTaGGTTGTTGATGCCTCGAAGCGTGAAGCCCCTCAG +
Preference number: 6 (lower is better)
Translates to: LVQVGKLSPCGP*VVDASKREAPQ
Trigger: CTGAGGGGCTTCACGCTTCGAGGCATCAACAACCCAGGGGCCACATGGGCTGAGCTTACCTACCTGAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424778.1
CDS CAA 72 bp GAGAACTTGGTCAGCTCCCTGTTGTTGTGGAGCCACTaGAACTCCAGTGGCCAGCTGCCCTCGGCCATGCAT +
Preference number: 6 (lower is better)
Translates to: ENLVSSLLLWSH*NSSGQLPSAMH
Trigger: ATGCATGGCCGAGGGCAGCTGGCCACTGGAGTTCAAGTGGCTCCACAACAACAGGGAGCTGACCAAGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000585283.1
CDS CAA 72 bp CTTCAGGCCAGACACGAAGCCCACGTGGATGCTGTCTaGAAAGTTAGGCCGGGCGGTCACCATGGTAACCTC +
Preference number: 6 (lower is better)
Translates to: LQARHEAHVDAV*KVRPGGHHGNL
Trigger: GAGGTTACCATGGTGACCGCCCGGCCTAACTTTCAAGACAGCATCCACGTGGGCTTCGTGTCTGGCCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 72 bp TATCGGATCCGGAAGCCCAGGAGGATGCCATTGATCTaGTCCTCTGCTGGCGGCTGCCATCGGATTAGCACG +
Preference number: 6 (lower is better)
Translates to: YRIRKPRRMPLI*SSAGGCHRIST
Trigger: CGTGCTAATCCGATGGCAGCCGCCAGCAGAGGACAAGATCAATGGCATCCTCCTGGGCTTCCGGATCCGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 72 bp ATGGAGGTAAGCTCAGCCCATGTGGCCCCTGGGTTGTaGATGCCTCGAAGCGTGAAGCCCCTCAGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: MEVSSAHVAPGL*MPRSVKPLSPS
Trigger: TGAAGGACTGAGGGGCTTCACGCTTCGAGGCATCAACAACCCAGGGGCCACATGGGCTGAGCTTACCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CAA 90 bp TATTCCAGGGAGAACTTGGTCAGCTCCCTGTTGTTGTGGAGCCACTaGAACTCCAGTGGCCAGCTGCCCTCGGCCATGCATGTAAGCACC +
Preference number: 6 (lower is better)
Translates to: YSRENLVSSLLLWSH*NSSGQLPSAMHVST
Trigger: GGTGCTTACATGCATGGCCGAGGGCAGCTGGCCACTGGAGTTCAAGTGGCTCCACAACAACAGGGAGCTGACCAAGTTCTCCCTGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000585283.1
CDS CAA 90 bp GGTGAACTTCTTCAGGCCAGACACGAAGCCCACGTGGATGCTGTCTaGAAAGTTAGGCCGGGCGGTCACCATGGTAACCTCCTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: GELLQARHEAHVDAV*KVRPGGHHGNLLFL
Trigger: CAGGAAGAGGAGGTTACCATGGTGACCGCCCGGCCTAACTTTCAAGACAGCATCCACGTGGGCTTCGTGTCTGGCCTGAAGAAGTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS CAA 90 bp CCAGACTTGGCACTGTTCCCCGAGTCTGTCTTCTTGGCGTACTTCTaGCTCTGGCCCCGGATGATGAGCACGAAGACCAGAAGCAGGATG +
Preference number: 6 (lower is better)
Translates to: PDLALFPESVFLAYF*LWPRMMSTKTRSRM
Trigger: CATCCTGCTTCTGGTCTTCGTGCTCATCATCCGGGGCCAGAGCAAGAAGTACGCCAAGAAGACAGACTCGGGGAACAGTGCCAAGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS GCA 72 bp GCGTTGTACACGCTCATCCGTATCTCGTACCGCCTGTaGTTGTTCAGGTTGTCCAGCTCGTACTGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: ALYTLIRISYRL*LFRLSSSYCVR
Trigger: CCTCACGCAGTACGAGCTGGACAACCTGAACAAGCACAGGCGGTACGAGATACGGATGAGCGTGTACAACGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 72 bp AGGTTGTTCACATCAGCATCCGTGATGTTCTTAAACTaGTACCCCACGGGCAGCCCGGCCAGGCAGTACCTG +
Preference number: 6 (lower is better)
Translates to: RLFTSASVMFLN*YPTGSPARQYL
Trigger: CAGGTACTGCCTGGCCGGGCTGCCCGTGGGGTACCAGTTTAAGAACATCACGGATGCTGATGTGAACAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000479356.1
CDS CCA 72 bp TTCCCCGAGTCTGTCTTCTTGGCGTACTTCTTGCTCTaGCCCCGGATGATGAGCACGAAGACCAGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: FPESVFLAYFLL*PRMMSTKTRSR
Trigger: CCTGCTTCTGGTCTTCGTGCTCATCATCCGGGGCCAGAGCAAGAAGTACGCCAAGAAGACAGACTCGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS CAA 72 bp GCACTGTTCCCCGAGTCTGTCTTCTTGGCGTACTTCTaGCTCTGGCCCCGGATGATGAGCACGAAGACCAGA +
Preference number: 6 (lower is better)
Translates to: ALFPESVFLAYF*LWPRMMSTKTR
Trigger: TCTGGTCTTCGTGCTCATCATCCGGGGCCAGAGCAAGAAGTACGCCAAGAAGACAGACTCGGGGAACAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS CAA 72 bp AAGCTCATCATCTCGCTGTGGCCTAGGGCTCCAGACTaGGCACTGTTCCCCGAGTCTGTCTTCTTGGCGTAC +
Preference number: 6 (lower is better)
Translates to: KLIISLWPRAPD*ALFPESVFLAY
Trigger: GTACGCCAAGAAGACAGACTCGGGGAACAGTGCCAAGTCTGGAGCCCTAGGCCACAGCGAGATGATGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS TCA 72 bp AGTCATAGCTCACGCCCGGCTTCAGGATGTCCATGCTaGACGTGTAGGAGCTCACCTCCTTGGGGATGTCTT +
Preference number: 6 (lower is better)
Translates to: SHSSRPASGCPC*TCRSSPPWGCL
Trigger: AAGACATCCCCAAGGAGGTGAGCTCCTACACGTTCAGCATGGACATCCTGAAGCCGGGCGTGAGCTATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS CCA 72 bp TTAACTTGGAAACCTAGCAACGCAGGGAGCTGGCAGTaGCTGCAAGCTCCTGAGAGTAAGCAGAGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: LTWKPSNAGSWQ*LQAPESKQSPA
Trigger: TGCTGGGCTCTGCTTACTCTCAGGAGCTTGCAGCCACTGCCAGCTCCCTGCGTTGCTAGGTTTCCAAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479356.1
CDS CAA 72 bp CTGGTGTACAGGCCGTTCTTTCGGCAGAAAGAGTTCTaGACGGAGAGCCGCCTGTTGTTGAGTTCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: LVYRPFFRQKEF*TESRLLLSSRA
Trigger: TGCCCTGGAACTCAACAACAGGCGGCTCTCCGTCAAGAACTCTTTCTGCCGAAAGAACGGCCTGTACACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS CAA 90 bp AGGCCGTTCTTTCGGCAGAAAGAGTTCTTGACGGAGAGCCGCCTGTaGTTGAGTTCCAGGGCAGGGAAGCTGCTTTCATCCAAGCTCATC +
Preference number: 6 (lower is better)
Translates to: RPFFRQKEFLTESRL*LSSRAGKLLSSKLI
Trigger: GATGAGCTTGGATGAAAGCAGCTTCCCTGCCCTGGAACTCAACAACAGGCGGCTCTCCGTCAAGAACTCTTTCTGCCGAAAGAACGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS TCA 72 bp GTAGTGGTTGACAAAGGAGTGGGCCTTCTGGTGGTTTaGGTCGACCTCGTACTCGCTGTCACTTCCCTGAGA +
Preference number: 6 (lower is better)
Translates to: VVVDKGVGLLVV*VDLVLAVTSLR
Trigger: TCTCAGGGAAGTGACAGCGAGTACGAGGTCGACTCAAACCACCAGAAGGCCCACTCCTTTGTCAACCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS TCA 72 bp CTTGACAGGAGAGGCTGGTACGATTATAGCAGCCACTaGGACAGCCATGATGGCAGAGACAGGGCTTCGAGA +
Preference number: 6 (lower is better)
Translates to: LDRRGWYDYSSH*DSHDGRDRASR
Trigger: TCTCGAAGCCCTGTCTCTGCCATCATGGCTGTCTCAGTGGCTGCTATAATCGTACCAGCCTCTCCTGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479356.1
CDS GCA 72 bp GCCATGCATGTAAGCACCAGGCGGTTTCCTTCCAAGTaGACCTGTGTCCGCACAGGCTCTGTCTTGAAATAC +
Preference number: 6 (lower is better)
Translates to: AMHVSTRRFPSK*TCVRTGSVLKY
Trigger: GTATTTCAAGACAGAGCCTGTGCGGACACAGGTGCACTTGGAAGGAAACCGCCTGGTGCTTACATGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392650.8
ENST00000585283.1
CDS CAA 90 bp CCGTTCTTTCGGCAGAAAGAGTTCTTGACGGAGAGCCGCCTGTTGTaGAGTTCCAGGGCAGGGAAGCTGCTTTCATCCAAGCTCATCATC +
Preference number: 6 (lower is better)
Translates to: PFFRQKEFLTESRLL*SSRAGKLLSSKLII
Trigger: GATGATGAGCTTGGATGAAAGCAGCTTCCCTGCCCTGGAACTCAACAACAGGCGGCTCTCCGTCAAGAACTCTTTCTGCCGAAAGAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000410094.5
ENST00000424778.1
CDS TCA 72 bp TGTTCTCAGCCAGGAAAAGCGTCTTCACTCGCTCTGTaGGGTTCCCCCGCTGGGCTTCCCAGAAATAAATCT +
Preference number: 6 (lower is better)
Translates to: CSQPGKASSLAL*GSPAGLPRNKS
Trigger: AGATTTATTTCTGGGAAGCCCAGCGGGGGAACCTCACAGAGCGAGTGAAGACGCTTTTCCTGGCTGAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392650.8
ENST00000424778.1
ENST00000479356.1
CDS TCA 72 bp TGTTCTCAGCCAGGAAAAGCGTCTTCACTCGCTCTGTaGGGTTCCCCCGCTGGGCTTCCCAGAAATAAATCA +
Preference number: 6 (lower is better)
Translates to: CSQPGKASSLAL*GSPAGLPRNKS
Trigger: TGATTTATTTCTGGGAAGCCCAGCGGGGGAACCTCACAGAGCGAGTGAAGACGCTTTTCCTGGCTGAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410094.5
CDS CAA 72 bp ACATTCTCCACGGTGAGCGTGATGGGCTGGCTGGTCTaGTTATCCCCGTTTTTGTCGTTAACAGCCTGCACA +
Preference number: 6 (lower is better)
Translates to: TFSTVSVMGWLV*LSPFLSLTACT
Trigger: TGTGCAGGCTGTTAACGACAAAAACGGGGATAACAAGACCAGCCAGCCCATCACGCTCACCGTGGAGAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392650.8
CDS TCA 72 bp GAGGTCAGCAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTTTCTACTGTATTCCAGGGAGAACTT +
Preference number: 6 (lower is better)
Translates to: EVSRSRPSWLTR*NPVSTVFQGEL
Trigger: AAGTTCTCCCTGGAATACAGTAGAAACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTGCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585283.1
CDS CAA 72 bp GGTGAAACCCCGTTTCTACTGTATTCCAGGGAGAACTaGGTCAGCTCCCTGTTGTTGTGGAGCCACTTGAAC +
Preference number: 6 (lower is better)
Translates to: GETPFLLYSREN*VSSLLLWSHLN
Trigger: GTTCAAGTGGCTCCACAACAACAGGGAGCTGACCAAGTTCTCCCTGGAATACAGTAGAAACGGGGTTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585283.1