RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SDK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000146555

Ensembl transcript IDs: ENST00000389531.7, ENST00000404826.7, ENST00000426596.1, ENST00000466611.1, ENST00000467827.1, ENST00000476701.5, ENST00000478527.1, ENST00000481856.1, ENST00000484011.1, ENST00000615806.4

Found 1518 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTaGTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGTGGCTTCCAGCC +
Preference number: 1 (lower is better)
Translates to: WRRRPVSSCPAELTV*CVRGRRGPAWWLPA
Trigger: GGCTGGAAGCCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp ACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTaGAGGCGCGTTCCGTGTGTGGCCATCTGGGTCCCCTCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: TASEDLYRVSHLPGL*RRVPCVAIWVPSPW
Trigger: CCAGGGAGAGGGGACCCAGATGGCCACACACGGAACGCGCCTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp ATTCACCCAGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTaGCAGCTCTCTCTGGGCTCACCTGCCTGGAATCTCTGCCCTGGC +
Preference number: 1 (lower is better)
Translates to: IHPEGGRAGGRGGVA*QLSLGSPAWNLCPG
Trigger: GCCAGGGCAGAGATTCCAGGCAGGTGAGCCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCTGGGTGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp GACCGATTCACCCAGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTaGCCTGGCAGCTCTCTCTGGGCTCACCTGCCTGGAATCTCTGCC +
Preference number: 1 (lower is better)
Translates to: DRFTQKVAVQEAEGV*PGSSLWAHLPGISA
Trigger: GGCAGAGATTCCAGGCAGGTGAGCCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCTGGGTGAATCGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR TCA 90 bp AGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTaGCCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGTGGC +
Preference number: 1 (lower is better)
Translates to: SNSGDAVPCPRVPRS*PCAVFGEGEGQRGG
Trigger: GCCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR TCA 90 bp GGGCACCAGCAGTGCTCCCGTTCCATCCAGACCCGGGACCCGGGCTaGGGGGTGGACCATGGCAGCCCAGTCGTCTGTTGCAAAGATGAC +
Preference number: 1 (lower is better)
Translates to: GHQQCSRSIQTRDPG*GVDHGSPVVCCKDD
Trigger: GTCATCTTTGCAACAGACGACTGGGCTGCCATGGTCCACCCCTCAGCCCGGGTCCCGGGTCTGGATGGAACGGGAGCACTGCTGGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp GAGGGAGCTCTGCACACCCATCCCTGTGGCTCAGACGGAGCCTCCTaGCCACTCCGTGACCACATCCTTGCAGGGTGGGGCCGAAGCAAT +
Preference number: 1 (lower is better)
Translates to: EGALHTHPCGSDGAS*PLRDHILAGWGRSN
Trigger: ATTGCTTCGGCCCCACCCTGCAAGGATGTGGTCACGGAGTGGCCAGGAGGCTCCGTCTGAGCCACAGGGATGGGTGTGCAGAGCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 90 bp GCATGTGGCCAGGAGACTGGCTCCTGGGTGGCACTGGTCAGATACTaGTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCT +
Preference number: 1 (lower is better)
Translates to: ACGQETGSWVALVRY*SVVPYPQVTGGTAP
Trigger: AGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR TCA 90 bp TCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGAGAAGGGTGTaGGCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGC +
Preference number: 1 (lower is better)
Translates to: SNPRSRRGCPALRRV*AAGSLEEEVERDGG
Trigger: GCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR TCA 90 bp GGCAGCTCTGAGATCTCACCTGACCCTCCACTCCCTCTCCCCGCTTaGCCCTTCCTAGTTGGTCTTGAAGACGGAGAAACCCAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: GSSEISPDPPLPLPA*PFLVGLEDGETQGW
Trigger: CCAGCCCTGGGTTTCTCCGTCTTCAAGACCAACTAGGAAGGGTCAAGCGGGGAGAGGGAGTGGAGGGTCAGGTGAGATCTCAGAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp CCACACTTTCTGCATGTGGCCAGGAGACTGGCTCCTGGGTGGCACTaGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGG +
Preference number: 1 (lower is better)
Translates to: PHFLHVARRLAPGWH*SDTAQLSPTLRSLG
Trigger: CCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACATGCAGAAAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp CAGGGGCCACACTTTCTGCATGTGGCCAGGAGACTGGCTCCTGGGTaGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCA +
Preference number: 1 (lower is better)
Translates to: QGPHFLHVARRLAPG*HWSDTAQLSPTLRS
Trigger: TGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACATGCAGAAAGTGTGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR TCA 90 bp GGTGACGCGGGAAGGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATaGGTTTCCACGTTGTCCTCACCTTTCAGACTGGATCCATGCTAC +
Preference number: 1 (lower is better)
Translates to: GDAGRRRVPAGRLSS*VSTLSSPFRLDPCY
Trigger: GTAGCATGGATCCAGTCTGAAAGGTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCCTTCCCGCGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 90 bp CTGGCCATGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTaGTCACATCCTGGCTTCCCGCCCACTTCGCCCTCTCCGGGGCCG +
Preference number: 1 (lower is better)
Translates to: LAMVSIYRFSSKKFQ*SHPGFPPTSPSPGP
Trigger: CGGCCCCGGAGAGGGCGAAGTGGGCGGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCATGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTaGCTTCCCGCCCACTTCGCCCTCTCCGGGGCCGAGGGGAAGGAG +
Preference number: 1 (lower is better)
Translates to: LHLSLLFQEIPVLTS*LPAHFALSGAEGKE
Trigger: CTCCTTCCCCTCGGCCCCGGAGAGGGCGAAGTGGGCGGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp GCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCTTTCAGACTaGATCCATGCTACCAGGACGCTGACCCACGGGGAGCCACACTTA +
Preference number: 1 (lower is better)
Translates to: AGSAHEFPRCPHLSD*IHATRTLTHGEPHL
Trigger: TAAGTGTGGCTCCCCGTGGGTCAGCGTCCTGGTAGCATGGATCCAGTCTGAAAGGTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 90 bp TCAGCAACGCTGACAGCACAGAATCCAGGCAATATCCACACCCTCTaGCCATGGAGGTGCACAAAACATCTAGGTAAGCAGGGGCCACAC +
Preference number: 1 (lower is better)
Translates to: SATLTAQNPGNIHTL*PWRCTKHLGKQGPH
Trigger: GTGTGGCCCCTGCTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATTGCCTGGATTCTGTGCTGTCAGCGTTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 90 bp GTGGCACTGTCCACTGTGGTGAGTCTCATCCGGGGAACTGTGGGTTaGGATTCTCATGCAGAAGTGGCTTTGGGCAGAGCATCTAGGATT +
Preference number: 1 (lower is better)
Translates to: VALSTVVSLIRGTVG*DSHAEVALGRASRI
Trigger: AATCCTAGATGCTCTGCCCAAAGCCACTTCTGCATGAGAATCGCAACCCACAGTTCCCCGGATGAGACTCACCACAGTGGACAGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 90 bp ACGTCTCAACACTCTCCCTGGCATGTAAAGCCACATCCTCATGGCTaGAGAGAGCAGTCATCAGAGTGCACAGAAAGCAGCGCTGGCCAT +
Preference number: 1 (lower is better)
Translates to: TSQHSPWHVKPHPHG*REQSSECTESSAGH
Trigger: ATGGCCAGCGCTGCTTTCTGTGCACTCTGATGACTGCTCTCTGCAGCCATGAGGATGTGGCTTTACATGCCAGGGAGAGTGTTGAGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTaGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTG +
Preference number: 1 (lower is better)
Translates to: NTLVNNARFLRNKQF*RRRPVSSCPAELTV
Trigger: CACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp ACGCTGACAGCACAGAATCCAGGCAATATCCACACCCTCTGCCCATaGAGGTGCACAAAACATCTAGGTAAGCAGGGGCCACACTTTCTG +
Preference number: 1 (lower is better)
Translates to: TLTAQNPGNIHTLCP*RCTKHLGKQGPHFL
Trigger: CAGAAAGTGTGGCCCCTGCTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATTGCCTGGATTCTGTGCTGTCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR TCA 90 bp TATACAAAACTCTCCTTGGTCTCCTGGGGCCATACTCAGCAACGCTaGCAGCACAGAATCCAGGCAATATCCACACCCTCTGCCCATGGA +
Preference number: 1 (lower is better)
Translates to: YTKLSLVSWGHTQQR*QHRIQAISTPSAHG
Trigger: TCCATGGGCAGAGGGTGTGGATATTGCCTGGATTCTGTGCTGTCAGCGTTGCTGAGTATGGCCCCAGGAGACCAAGGAGAGTTTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 90 bp ACAGCACAGAATCCAGGCAATATCCACACCCTCTGCCCATGGAGGTaGACAAAACATCTAGGTAAGCAGGGGCCACACTTTCTGCATGTG +
Preference number: 1 (lower is better)
Translates to: TAQNPGNIHTLCPWR*TKHLGKQGPHFLHV
Trigger: CACATGCAGAAAGTGTGGCCCCTGCTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATTGCCTGGATTCTGTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp CTGCAGAGAGCAGTCATCAGAGTGCACAGAAAGCAGCGCTGGCCATaGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCAC +
Preference number: 1 (lower is better)
Translates to: LQRAVIRVHRKQRWP*SPFIASLPRNSSAH
Trigger: GTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGATGACTGCTCTCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp GTTGCTTCTCAAATGCCGCATTGCTCTGGGAGGCCAAAATCTACCTaGAAACATCCAGCTCTGTTCCTTTGCACAGGTGGTTCTCATGGG +
Preference number: 1 (lower is better)
Translates to: VASQMPHCSGRPKST*KHPALFLCTGGSHG
Trigger: CCCATGAGAACCACCTGTGCAAAGGAACAGAGCTGGATGTTTCCAGGTAGATTTTGGCCTCCCAGAGCAATGCGGCATTTGAGAAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 90 bp TCATGGCTGCAGAGAGCAGTCATCAGAGTGCACAGAAAGCAGCGCTaGCCATGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGT +
Preference number: 1 (lower is better)
Translates to: SWLQRAVIRVHRKQR*PWSPFIASLPRNSS
Trigger: ACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGATGACTGCTCTCTGCAGCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTaGTCTGGGAGGCCAAAATCTACCTGGAAACATCCAGCTCTGTTC +
Preference number: 1 (lower is better)
Translates to: PEDKELGTVASQMPH*SGRPKSTWKHPALF
Trigger: GAACAGAGCTGGATGTTTCCAGGTAGATTTTGGCCTCCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR TCA 90 bp ATTCAACAGAGGCATGGCCAAGTTTGTCAAGTATTAAGGTGGTGGTaGTTTCATTATCATGATAACAAAAGGCTGTTGTGTTCACTTTCT +
Preference number: 1 (lower is better)
Translates to: IQQRHGQVCQVLRWW*FHYHDNKRLLCSLS
Trigger: AGAAAGTGAACACAACAGCCTTTTGTTATCATGATAATGAAATCACCACCACCTTAATACTTGACAAACTTGGCCATGCCTCTGTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426596.1
3UTR-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGCCTCCGTTCCGCCCTaGGGGAGGCGCGGCGCTTTG +
Preference number: 2 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQASVPP*GRRGAL
Trigger: CAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGCCTCCGTTCCGCCCTaGGGGAGGCGCGGCGCTTTG +
Preference number: 2 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCASVPP*GRRGAL
Trigger: CAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGGGCACACACGCCAGTaGGCACCAGCAGTGCTCCCG +
Preference number: 2 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGGHTRQ*APAVLP
Trigger: CGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGTTGCAAAGATGACGTaGGGGGCTGGAGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGVAKMT*GAGGMA
Trigger: GGCCATGCCTCCAGCCCCTCACGTCATCTTTGCAAC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGACAGGCAGAAAAGCCTaGGGACCGCACCACTGCAGT +
Preference number: 2 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGTGRKA*GPHHCS
Trigger: ACTGCAGTGGTGCGGTCCTCAGGCTTTTCTGCCTGT...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGCGGAGTTGACCGTGTaGTGTGTTCGGGGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGAELTV*CVRGRR
Trigger: TCTCCTTCCCCGAACACAGCACACGGTCAACTCCGC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTAGAGGGCCAGCGTGGTaGCTTCCAGCCCTAAGAGGC +
Preference number: 2 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCRGPAW*LPALRG
Trigger: GCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCT...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CAA 90 bp AAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTaGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGTGG +
Preference number: 2 (lower is better)
Translates to: KQFWRRRPVSSCPAE*TVCCVRGRRGPAWW
Trigger: CCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCCCAGGCCCCGGAGGTaGCAAGCCATTGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEPRPRR*QAIAPV
Trigger: CACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCCGTTTGCCGTGCACTaGGGGGCACTGACAGGGTGG +
Preference number: 2 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEPFAVH*GALTGW
Trigger: CCACCCTGTCAGTGCCCCCCAGTGCACGGCAAACGG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGAGGCCGAGGGGGTGTaGCCTGGCAGCTCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHEAEGV*PGSSLW
Trigger: CCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 90 bp GCCAGGAGACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTaGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTT +
Preference number: 2 (lower is better)
Translates to: ARRLAPGWHWSDTAQ*SPTLRSLGERHLPV
Trigger: AACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGTCCCTCGCTGTCAGGTaGGAAGGAAGGGGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: VSRGVDRVLCSGKERASVSLAVR*EGRGKD
Trigger: GTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGA...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGGGGGACGGCCTGGTGTaGACGAGGCGAGTCGGGAGC +
Preference number: 2 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTGDGLV*TRRVGS
Trigger: GCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCC...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGCACACCCATCCCTGTaGCTCAGACGGAGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEAHPSL*LRRSLL
Trigger: CAGGAGGCTCCGTCTGAGCCACAGGGATGGGTGTGC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGATTCACCCAGAAGGTaGCCGTGCAGGAGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEDSPRR*PCRRPR
Trigger: CCTCGGCCTCCTGCACGGCCACCTTCTGGGTGAATC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTCCCTCGCTGTCAGGTaGGAAGGAAGGGGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCSLAVR*EGRGKD
Trigger: GTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGA...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGGGGCACACACGCCAGTaGGCACCAGCAGTGCTCCCG +
Preference number: 2 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTGHTRQ*APAVLP
Trigger: CGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCC...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGCACACCCTCTGCCCATaGAGGTGCACAAAACATCTA +
Preference number: 2 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGHTLCP*RCTKHL
Trigger: TAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTG...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGAATGCCGCATTGCTCTaGGAGGCCAAAATCTACCTG +
Preference number: 2 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGNAALL*EAKIYL
Trigger: CAGGTAGATTTTGGCCTCCCAGAGCAATGCGGCATT...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGAGAGGGGCTTGGGCTaGACCGATTCACCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEERGLG*TDSPRR
Trigger: CCTTCTGGGTGAATCGGTCCAGCCCAAGCCCCTCTC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTACAGGCAGAAAAGCCTaGGGACCGCACCACTGCAGT +
Preference number: 2 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARTGRKA*GPHHCS
Trigger: ACTGCAGTGGTGCGGTCCTCAGGCTTTTCTGCCTGT...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTTCCCTCGCTGTCAGGTaGGAAGGAAGGGGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARSLAVR*EGRGKD
Trigger: GTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGA...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACAAGACCTGTACAGAGTaGGCCACCTCCCGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHKTCTE*ATSRGC
Trigger: ACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTT...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGAGGTGCCAAGCCATTaGACCAGTGAAATACACCTT +
Preference number: 2 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGEVPSH*TSEIHL
Trigger: AAGGTGTATTTCACTGGTGCAATGGCTTGGCACCTC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGAGAAACCCAGGGCTaGGGAGGTCTGAGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSGETQG*GGLRSS
Trigger: GGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCC...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCAGGAGAGGGCCAGCGTaGTGGCTTCCAGCCCTAAGA +
Preference number: 2 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTRRGPA*WLPALR
Trigger: TCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCT...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCTCTCCTTGGTCTCCTaGGGCCATACTCAGCAACGC +
Preference number: 2 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVELSLVS*GHTQQR
Trigger: GCGTTGCTGAGTATGGCCCCAGGAGACCAAGGAGAG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCTTCCTAGTTGGTCTTaGAGACGGAGAAACCCAGGG +
Preference number: 2 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARLPSWS*RRRNPG
Trigger: CCCTGGGTTTCTCCGTCTTCAAGACCAACTAGGAAG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGAGTGGGCACCAGCAGTaGTCCCGTTCCATCCAGACC +
Preference number: 2 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTSGHQQ*SRSIQT
Trigger: GGTCTGGATGGAACGGGAGCACTGCTGGTGCCCACT...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGAGGAGAGGGCCAGCGTaGTGGCTTCCAGCCCTAAGA +
Preference number: 2 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTRRGPA*WLPALR
Trigger: TCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCT...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACCTAGACACTGCCAAGTaGGAACATTTCAGAAACAGA +
Preference number: 2 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDLDTAK*EHFRNR
Trigger: TCTGTTTCTGAAATGTTCTCACTTGGCAGTGTCTAG...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGCGTGTCCCGCGGAGTTaGCCGTGTGCTGTGTTCGGG +
Preference number: 2 (lower is better)
Translates to: CARGESGACVLRAVLLYLRVPRS*PCAVFG
Trigger: CCCGAACACAGCACACGGTCAACTCCGCGGGACACG...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGACTGACAGGGTGGTCTTaGGTCTTGTGTGTGTCACGC +
Preference number: 2 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGLTGWS*VLCVSR
Trigger: GCGTGACACACACAAGACTCAAGACCACCCTGTCAG...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAAGCCCAGTCGTCTGTTaGAAAGATGACGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGSPVVC*KDDVRG
Trigger: GCCCCTCACGTCATCTTTGCAACAGACGACTGGGCT...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGCCTCCGTTCCGCCCTaGGGGAGGCGCGGCGCTTTG +
Preference number: 2 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRASVPP*GRRGAL
Trigger: CAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCTTCCTAGTTGGTCTTaGAGACGGAGAAACCCAGGG +
Preference number: 2 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCLPSWS*RRRNPG
Trigger: CCCTGGGTTTCTCCGTCTTCAAGACCAACTAGGAAG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCTAGACACTGCCAAGTaGGAACATTTCAGAAACAGA +
Preference number: 2 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCLDTAK*EHFRNR
Trigger: TCTGTTTCTGAAATGTTCTCACTTGGCAGTGTCTAG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCGTGTCCCGCGGAGTTaGCCGTGTGCTGTGTTCGGG +
Preference number: 2 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCRVPRS*PCAVFG
Trigger: CCCGAACACAGCACACGGTCAACTCCGCGGGACACG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCCCAGGCCCCGGAGGTaGCAAGCCATTGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCPRPRR*QAIAPV
Trigger: CACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCCTTGACTAGACACTaGCAAGTGAGAACATTTCAG +
Preference number: 2 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCSLTRH*QVRTFQ
Trigger: CTGAAATGTTCTCACTTGGCAGTGTCTAGTCAAGGA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGTCCTTGACTAGACACTaGCAAGTGAGAACATTTCAG +
Preference number: 2 (lower is better)
Translates to: VSRGVDRVLCSGKERASVSLTRH*QVRTFQ
Trigger: CTGAAATGTTCTCACTTGGCAGTGTCTAGTCAAGGA...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGGGAGAAACCCAGGGCTaGGGAGGTCTGAGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: CARGESGACVLRAVLLYLGETQG*GGLRSS
Trigger: GGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCC...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTAAGGGTGTGAGCCGCTaGTTCTCTGGAAGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPKGVSR*FSGRGG
Trigger: ACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTT...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGGTTAAGGCTAAAAGCTaGCCTCGGACTGGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTVKAKS*PRTGRG
Trigger: CCCTCTCCCAGTCCGAGGCCAGCTTTTAGCCTTAAC...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCACAGAAAGCAGCGCTaGCCATGGTCTCCATTTATC +
Preference number: 2 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHHRKQR*PWSPFI
Trigger: GATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 90 bp CTCTGGGAGGCCAAAATCTACCTGGAAACATCCAGCTCTGTTCCTTaGCACAGGTGGTTCTCATGGGACAGAGTCCCTCCGAGGCATGGG +
Preference number: 2 (lower is better)
Translates to: LWEAKIYLETSSSVP*HRWFSWDRVPPRHG
Trigger: CCCATGCCTCGGAGGGACTCTGTCCCATGAGAACCACCTGTGCAAAGGAACAGAGCTGGATGTTTCCAGGTAGATTTTGGCCTCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTAAGCCATTGCACCAGTaGAATACACCTTCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAKPLHQ*NTPSLK
Trigger: TTTAAGAGAAGGTGTATTTCACTGGTGCAATGGCTT...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCTGGGACAAAACGCACTaGGCCCAGGGAAAAACGTTT +
Preference number: 2 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCWDKTH*AQGKTF
Trigger: AAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCA...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGAGGTGCCAAGCCATTaGACCAGTGAAATACACCTT +
Preference number: 2 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTEVPSH*TSEIHL
Trigger: AAGGTGTATTTCACTGGTGCAATGGCTTGGCACCTC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCCCAGGCCCCGGAGGTaGCAAGCCATTGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: PEDKELGTVASQMPHCSGPRPRR*QAIAPV
Trigger: CACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGTGGTGGAGAAGCGGTaGCTGCTGCGAGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: PEDKELGTVASQMPHCSGVVEKR*LLRAAS
Trigger: GCTGGCTGCTCGCAGCAGCCACCGCTTCTCCACCAC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGGCGTTGAGAAGGGTGTaGGCCGCTGGTTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: CARGESGACVLRAVLLYLALRRV*AAGSLE
Trigger: TTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGC...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCAGAGGGCCAGCGTGGTaGCTTCCAGCCCTAAGAGGC +
Preference number: 2 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPRGPAW*LPALRG
Trigger: GCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCT...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTCTGAGGGGTGGACCATaGCAGCCCAGTCGTCTGTTG +
Preference number: 2 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLLRGGP*QPSRLL
Trigger: CAACAGACGACTGGGCTGCCATGGTCCACCCCTCAG...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTCTACCCTCAGGTCACTaGGGGAACGGCACCTGCCCG +
Preference number: 2 (lower is better)
Translates to: WSPFIASLPRNSSAHILALPSGH*GNGTCP
Trigger: CGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAG...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTCTGACAGGGTGGTCTTaGGTCTTGTGTGTGTCACGC +
Preference number: 2 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLLTGWS*VLCVSR
Trigger: GCGTGACACACACAAGACTCAAGACCACCCTGTCAG...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCAAAAAGAAACAAACCTaGTTCCTGCAGCGAAGTTAC +
Preference number: 2 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTKKKQT*FLQRSY
Trigger: GTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTT...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGTGGTGGAGAAGCGGTaGCTGCTGCGAGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNVVEKR*LLRAAS
Trigger: GCTGGCTGCTCGCAGCAGCCACCGCTTCTCCACCAC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGAAGCCATTGCACCAGTaGAATACACCTTCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLKPLHQ*NTPSLK
Trigger: TTTAAGAGAAGGTGTATTTCACTGGTGCAATGGCTT...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTCGTCTGTTGCAAAGATaGCGTGAGGGGCTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: WSPFIASLPRNSSAHILARLLQR*REGLEA
Trigger: TGCCTCCAGCCCCTCACGTCATCTTTGCAACAGACG...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGGAAACAGAAGTGTCATaGTGTTGTATCGAAAACCCG +
Preference number: 2 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTETEVS*CCIENP
Trigger: CGGGTTTTCGATACAACATCATGACACTTCTGTTTC...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCAAAAAGAAACAAACCTaGTTCCTGCAGCGAAGTTAC +
Preference number: 2 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCKKKQT*FLQRSY
Trigger: GTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGTCCTTGACTAGACACTaGCAAGTGAGAACATTTCAG +
Preference number: 2 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTSLTRH*QVRTFQ
Trigger: CTGAAATGTTCTCACTTGGCAGTGTCTAGTCAAGGA...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACATTTGCAGACACTGTTaGTTTTCATCTTTCCCATGT +
Preference number: 2 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHICRHC*FSSFPC
Trigger: ACATGGGAAAGATGAAAAGCAACAGTGTCTGCAAAT...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTAGGGAGGGGACGGCCTaGTGTGCACGAGGCGAGTCG +
Preference number: 2 (lower is better)
Translates to: KCHDVVSKTREQQTYLESREGTA*CARGES
Trigger: CGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCT...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGTTAAGGCTAAAAGCTaGCCTCGGACTGGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PEDKELGTVASQMPHCSGVKAKS*PRTGRG
Trigger: CCCTCTCCCAGTCCGAGGCCAGCTTTTAGCCTTAAC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCTTCCTAGTTGGTCTTaGAGACGGAGAAACCCAGGG +
Preference number: 2 (lower is better)
Translates to: PEDKELGTVASQMPHCSGLPSWS*RRRNPG
Trigger: CCCTGGGTTTCTCCGTCTTCAAGACCAACTAGGAAG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGCGTTGAGAAGGGTGTaGGCCGCTGGTTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRALRRV*AAGSLE
Trigger: TTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTTGGGACAAAACGCACTaGGCCCAGGGAAAAACGTTT +
Preference number: 2 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLWDKTH*AQGKTF
Trigger: AAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCA...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCCAGGGAAAAACGTTTaGTCTTCAAACCCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCPGKNV*SSNPRS
Trigger: GCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCGGGGAACTGTGGGTTaGGATTCTCATGCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPRGTVG*DSHAEV
Trigger: CACTTCTGCATGAGAATCGCAACCCACAGTTCCCCG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCTACCCTCAGGTCACTaGGGGAACGGCACCTGCCCG +
Preference number: 2 (lower is better)
Translates to: KCHDVVSKTREQQTYLESLPSGH*GNGTCP
Trigger: CGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 90 bp TGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTaGCTTTATTTGCAGACACTGTTGCTTTTCATCTTTCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: WCARGESGACVLRAV*LYLQTLLLFIFPMY
Trigger: GTACATGGGAAAGATGAAAAGCAACAGTGTCTGCAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTAGAGGGCCAGCGTGGTaGCTTCCAGCCCTAAGAGGC +
Preference number: 2 (lower is better)
Translates to: KCHDVVSKTREQQTYLESRGPAW*LPALRG
Trigger: GCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCT...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACCTCTCCTTGGTCTCCTaGGGCCATACTCAGCAACGC +
Preference number: 2 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNLSLVS*GHTQQR
Trigger: GCGTTGCTGAGTATGGCCCCAGGAGACCAAGGAGAG...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTGTTGCAAAGATGACGTaGGGGGCTGGAGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: KCHDVVSKTREQQTYLESVAKMT*GAGGMA
Trigger: GGCCATGCCTCCAGCCCCTCACGTCATCTTTGCAAC...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCTCTGCCCATGGAGGTaGACAAAACATCTAGGTAAG +
Preference number: 2 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPLCPWR*TKHLGK
Trigger: CTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGGAGAAACCCAGGGCTaGGGAGGTCTGAGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWGETQG*GGLRSS
Trigger: GGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTGGGACAAAACGCACTaGGCCCAGGGAAAAACGTTT +
Preference number: 2 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRWDKTH*AQGKTF
Trigger: AAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAGCGGAGTTGACCGTGTaGTGTGTTCGGGGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: INKKAPGDSKDAFISCDIAELTV*CVRGRR
Trigger: TCTCCTTCCCCGAACACAGCACACGGTCAACTCCGC...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAAAGGGTGTGAGCCGCTaGTTCTCTGGAAGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRKGVSR*FSGRGG
Trigger: ACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTT...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACAAGCAGCGCTGGCCATaGTCTCCATTTATCGCTTCT +
Preference number: 2 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNKQRWP*SPFIAS
Trigger: AGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTT...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACAAAGCCACATCCTCATaGCTGCAGAGAGCAGTCATC +
Preference number: 2 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNKATSS*LQRAVI
Trigger: GATGACTGCTCTCTGCAGCCATGAGGATGTGGCTTT...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 90 bp TTGACTAGACACTGCCAAGTGAGAACATTTCAGAAACAGATGAAGTaGGGACAAAACGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCA +
Preference number: 2 (lower is better)
Translates to: LTRHCQVRTFQKQMK*GQNALSPGKNVCSS
Trigger: TGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTGAAATGTTCTCACTTGGCAGTGTCTAGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR TCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTCTAGACACTGCCAAGTaGGAACATTTCAGAAACAGA +
Preference number: 2 (lower is better)
Translates to: WSPFIASLPRNSSAHILALDTAK*EHFRNR
Trigger: TCTGTTTCTGAAATGTTCTCACTTGGCAGTGTCTAG...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCAAAAAGAAACAAACCTaGTTCCTGCAGCGAAGTTAC +
Preference number: 2 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPKKKQT*FLQRSY
Trigger: GTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTT...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCATTTGCAGACACTGTTaGTTTTCATCTTTCCCATGT +
Preference number: 2 (lower is better)
Translates to: APYRSRFTKSGGETENMSICRHC*FSSFPC
Trigger: ACATGGGAAAGATGAAAAGCAACAGTGTCTGCAAAT...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCGGGGAACTGTGGGTTaGGATTCTCATGCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: KCHDVVSKTREQQTYLESRGTVG*DSHAEV
Trigger: CACTTCTGCATGAGAATCGCAACCCACAGTTCCCCG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCCAGGGAAAAACGTTTaGTCTTCAAACCCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWPGKNV*SSNPRS
Trigger: GCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CAA 90 bp CTGGGAACTGTCTTCCAGAGCTGGTTTACTTTCATTATAATTGTGTaGAATGTGGATAAGATAGCTTGGCATGCCTCCTATATTGACTGT +
Preference number: 2 (lower is better)
Translates to: LGTVFQSWFTFIIIV*NVDKIAWHASYIDC
Trigger: ACAGTCAATATAGGAGGCATGCCAAGCTATCTTATCCACATTCAACACAATTATAATGAAAGTAAACCAGCTCTGGAAGACAGTTCCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
3UTR CCA 72 bp GGGGGCACTTACAGGGACCCGGGGCACACACGCCAGTaGGCACCAGCAGTGCTCCCGTTCCATCCAGACCCG +
Preference number: 3 (lower is better)
Translates to: GGTYRDPGHTRQ*APAVLPFHPDP
Trigger: CGGGTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTCCCTGTAAGTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GAGAGGGGCTTGGGCTGGACCGATTCACCCAGAAGGTaGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: ERGLGWTDSPRR*PCRRPRGCGLA
Trigger: TGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCTGGGTGAATCGGTCCAGCCCAAGCCCCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR TCA 72 bp CAGTGCTCCCGTTCCATCCAGACCCGGGACCCGGGCTaGGGGGTGGACCATGGCAGCCCAGTCGTCTGTTGC +
Preference number: 3 (lower is better)
Translates to: QCSRSIQTRDPG*GVDHGSPVVCC
Trigger: GCAACAGACGACTGGGCTGCCATGGTCCACCCCTCAGCCCGGGTCCCGGGTCTGGATGGAACGGGAGCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp CGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTaGTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGTGG +
Preference number: 3 (lower is better)
Translates to: RPVSSCPAELTV*CVRGRRGPAWW
Trigger: CCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTaGCAGCTCTCTCTGGGCTCACCTGCCTGGAATCTC +
Preference number: 3 (lower is better)
Translates to: EGGRAGGRGGVA*QLSLGSPAWNL
Trigger: GAGATTCCAGGCAGGTGAGCCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GAGGCTGAAGGCGAGGCTGGGGAGAGGGGCTTGGGCTaGACCGATTCACCCAGAAGGTGGCCGTGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: EAEGEAGERGLG*TDSPRRWPCRR
Trigger: CCTCCTGCACGGCCACCTTCTGGGTGAATCGGTCCAGCCCAAGCCCCTCTCCCCAGCCTCGCCTTCAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp CTGCACACCCATCCCTGTGGCTCAGACGGAGCCTCCTaGCCACTCCGTGACCACATCCTTGCAGGGTGGGGC +
Preference number: 3 (lower is better)
Translates to: LHTHPCGSDGAS*PLRDHILAGWG
Trigger: GCCCCACCCTGCAAGGATGTGGTCACGGAGTGGCCAGGAGGCTCCGTCTGAGCCACAGGGATGGGTGTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGTaGCTTCCAGCCCTAAGAGGCTTCCCTCTCCCTCGC +
Preference number: 3 (lower is better)
Translates to: VCCVRGRRGPAW*LPALRGFPLPR
Trigger: GCGAGGGAGAGGGAAGCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp CCCGTTCCATCCAGACCCGGGACCCGGGCTGAGGGGTaGACCATGGCAGCCCAGTCGTCTGTTGCAAAGATG +
Preference number: 3 (lower is better)
Translates to: PVPSRPGTRAEG*TMAAQSSVAKM
Trigger: CATCTTTGCAACAGACGACTGGGCTGCCATGGTCCACCCCTCAGCCCGGGTCCCGGGTCTGGATGGAACGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp ACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTaGTGGCTTCCAGCCCTAAGAGGCTTCCCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: TVCCVRGRRGPA*WLPALRGFPLP
Trigger: AGGGAGAGGGAAGCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTATAGACTCCGGAAAGTaGCCTCCGTTCCGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCIDSGK*PPFRPE
Trigger: CTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTAT...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGATAGACTCCGGAAAGTaGCCTCCGTTCCGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: VSRGVDRVLCSGKERASVIDSGK*PPFRPE
Trigger: CTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTAT...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp TTCCTAGTTGGTCTTGAAGACGGAGAAACCCAGGGCTaGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTG +
Preference number: 3 (lower is better)
Translates to: FLVGLEDGETQG*GGLRSSQAPEV
Trigger: CACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCCGTCTTCAAGACCAACTAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp CAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTaGGGGAACGGCACCTGCCCGTTTGCCGTGCACTGG +
Preference number: 3 (lower is better)
Translates to: QILLSCPLPSGH*GNGTCPFAVHW
Trigger: CCAGTGCACGGCAAACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCCCAGGGAAAAACGTTaGCTCTTCAAACCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: VSRGVDRVLCSGKERASVPREKR*LFKPQE
Trigger: CTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCTGAAAGCCGACTCCTaGACTAGACACTGCCAAGTG +
Preference number: 3 (lower is better)
Translates to: VSRGVDRVLCSGKERASVLKADS*TRHCQV
Trigger: CACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCAG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCTGAAAGCCGACTCCTaGACTAGACACTGCCAAGTG +
Preference number: 3 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCLKADS*TRHCQV
Trigger: CACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCAG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR TCA 72 bp GGTGGACCATGGCAGCCCAGTCGTCTGTTGCAAAGATaGCGTGAGGGGCTGGAGGCATGGCCATCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: GGPWQPSRLLQR*REGLEAWPSLS
Trigger: GCTCAGAGATGGCCATGCCTCCAGCCCCTCACGTCATCTTTGCAACAGACGACTGGGCTGCCATGGTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp CAGGAGACTGGCTCCTGGGTGGCACTGGTCAGATACTaGTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGA +
Preference number: 3 (lower is better)
Translates to: QETGSWVALVRY*SVVPYPQVTGG
Trigger: TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp TCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTaGCTTCCCGCCCACTTCGCCCTCTCCGGGGCCGAG +
Preference number: 3 (lower is better)
Translates to: SLLFQEIPVLTS*LPAHFALSGAE
Trigger: CTCGGCCCCGGAGAGGGCGAAGTGGGCGGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATAGACTCCGGAAAGTaGCCTCCGTTCCGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRIDSGK*PPFRPE
Trigger: CTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTAT...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCCCAGGGAAAAACGTTaGCTCTTCAAACCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCPREKR*LFKPQE
Trigger: CTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GCCACACTTTCTGCATGTGGCCAGGAGACTGGCTCCTaGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCC +
Preference number: 3 (lower is better)
Translates to: ATLSACGQETGS*VALVRYCSVVP
Trigger: GGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACATGCAGAAAGTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp AGCAGGGGCCACACTTTCTGCATGTGGCCAGGAGACTaGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGT +
Preference number: 3 (lower is better)
Translates to: SRGHTFCMWPGD*LLGGTGQILLS
Trigger: ACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACATGCAGAAAGTGTGGCCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCAGAAACAGATGAAGTaGGGACAAAACGCACTGAGC +
Preference number: 3 (lower is better)
Translates to: VSRGVDRVLCSGKERASVQKQMK*GQNALS
Trigger: GCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR TCA 72 bp AGGAGCCGCCGAGGATGTCCTGCGTTGAGAAGGGTGTaGGCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: RSRRGCPALRRV*AAGSLEEEVER
Trigger: TCTTTCTACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGCAGGACATCCTCGGCGGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp CACTTTCTGCATGTGGCCAGGAGACTGGCTCCTGGGTaGCACTGGTCAGATACTGCTCAGTTGTCCCCTACC +
Preference number: 3 (lower is better)
Translates to: HFLHVARRLAPG*HWSDTAQLSPT
Trigger: GGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACATGCAGAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR TCA 72 bp GGAAGGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATaGGTTTCCACGTTGTCCTCACCTTTCAGACTGGAT +
Preference number: 3 (lower is better)
Translates to: GRRRVPAGRLSS*VSTLSSPFRLD
Trigger: ATCCAGTCTGAAAGGTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp GTTTCCACGTTGTCCTCACCTTTCAGACTGGATCCATaGTACCAGGACGCTGACCCACGGGGAGCCACACTT +
Preference number: 3 (lower is better)
Translates to: VSTLSSPFRLDP*YQDADPRGATL
Trigger: AAGTGTGGCTCCCCGTGGGTCAGCGTCCTGGTAGCATGGATCCAGTCTGAAAGGTGAGGACAACGTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTaGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAG +
Preference number: 3 (lower is better)
Translates to: VNNARFLRNKQF*RRRPVSSCPAE
Trigger: CTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GCTCATGAGTTTCCACGTTGTCCTCACCTTTCAGACTaGATCCATGCTACCAGGACGCTGACCCACGGGGAG +
Preference number: 3 (lower is better)
Translates to: AHEFPRCPHLSD*IHATRTLTHGE
Trigger: CTCCCCGTGGGTCAGCGTCCTGGTAGCATGGATCCAGTCTGAAAGGTGAGGACAACGTGGAAACTCATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCAGAAACAGATGAAGTaGGGACAAAACGCACTGAGC +
Preference number: 3 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTQKQMK*GQNALS
Trigger: GCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTCGTGTCCCGCGGAGTaGACCGTGTGCTGTGTTCGG +
Preference number: 3 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCSCPAE*TVCCVR
Trigger: CCGAACACAGCACACGGTCAACTCCGCGGGACACGA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR TCA 72 bp CTCTCCTTGGTCTCCTGGGGCCATACTCAGCAACGCTaGCAGCACAGAATCCAGGCAATATCCACACCCTCT +
Preference number: 3 (lower is better)
Translates to: LSLVSWGHTQQR*QHRIQAISTPS
Trigger: AGAGGGTGTGGATATTGCCTGGATTCTGTGCTGTCAGCGTTGCTGAGTATGGCCCCAGGAGACCAAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp TCCACTGTGGTGAGTCTCATCCGGGGAACTGTGGGTTaGGATTCTCATGCAGAAGTGGCTTTGGGCAGAGCA +
Preference number: 3 (lower is better)
Translates to: STVVSLIRGTVG*DSHAEVALGRA
Trigger: TGCTCTGCCCAAAGCCACTTCTGCATGAGAATCGCAACCCACAGTTCCCCGGATGAGACTCACCACAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp CACTCTCCCTGGCATGTAAAGCCACATCCTCATGGCTaGAGAGAGCAGTCATCAGAGTGCACAGAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: HSPWHVKPHPHG*REQSSECTESS
Trigger: GCTGCTTTCTGTGCACTCTGATGACTGCTCTCTGCAGCCATGAGGATGTGGCTTTACATGCCAGGGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GCACAGAATCCAGGCAATATCCACACCCTCTGCCCATaGAGGTGCACAAAACATCTAGGTAAGCAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: AQNPGNIHTLCP*RCTKHLGKQGP
Trigger: TGGCCCCTGCTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATTGCCTGGATTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp GTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTaGTCACATCCTGGCTTCCCGCCCACTTCGCCCTCT +
Preference number: 3 (lower is better)
Translates to: VSIYRFSSKKFQ*SHPGFPPTSPS
Trigger: AGAGGGCGAAGTGGGCGGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGAGAAGTGTCATGATGTaGTATCGAAAACCCGAGAGC +
Preference number: 3 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTRSVMM*YRKPES
Trigger: GCTCTCGGGTTTTCGATACAACATCATGACACTTCT...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACACGGAAAACATGAGCTaGAAACAGAAGTGTCATGAT +
Preference number: 3 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHTENMS*KQKCHD
Trigger: ATCATGACACTTCTGTTTCAAGCTCATGTTTTCCGT...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCTGAAAGCCGACTCCTaGACTAGACACTGCCAAGTG +
Preference number: 3 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCLKADS*TRHCQV
Trigger: CACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCAG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACTCGTGTCCCGCGGAGTaGACCGTGTGCTGTGTTCGG +
Preference number: 3 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNSCPAE*TVCCVR
Trigger: CCGAACACAGCACACGGTCAACTCCGCGGGACACGA...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCTCAGATACTGCTCAGTaGTCCCCTACCCTCAGGTCA +
Preference number: 3 (lower is better)
Translates to: APYRSRFTKSGGETENMSSDTAQ*SPTLRS
Trigger: TGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGA...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp CTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTaGACCAGTGAAATACACCTTCTCTTAAAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: LRSSQAPEVPSH*TSEIHLLLKRK
Trigger: TTTTCTTTTTAAGAGAAGGTGTATTTCACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp AATCCAGGCAATATCCACACCCTCTGCCCATGGAGGTaGACAAAACATCTAGGTAAGCAGGGGCCACACTTT +
Preference number: 3 (lower is better)
Translates to: NPGNIHTLCPWR*TKHLGKQGPHF
Trigger: AAAGTGTGGCCCCTGCTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATTGCCTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp CAGAGAGCAGTCATCAGAGTGCACAGAAAGCAGCGCTaGCCATGGTCTCCATTTATCGCTTCTCTTCCAAGA +
Preference number: 3 (lower is better)
Translates to: QRAVIRVHRKQR*PWSPFIASLPR
Trigger: TCTTGGAAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGATGACTGCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp CAAATGCCGCATTGCTCTGGGAGGCCAAAATCTACCTaGAAACATCCAGCTCTGTTCCTTTGCACAGGTGGT +
Preference number: 3 (lower is better)
Translates to: QMPHCSGRPKST*KHPALFLCTGG
Trigger: ACCACCTGTGCAAAGGAACAGAGCTGGATGTTTCCAGGTAGATTTTGGCCTCCCAGAGCAATGCGGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR TCA 72 bp AATTTCAGAAAAAGTTGTAGGGAACGTTTAGGGACCTaGCGGCTCCCTAAACCAGAAGGTGACGCGGGAAGG +
Preference number: 3 (lower is better)
Translates to: NFRKSCRERLGT*RLPKPEGDAGR
Trigger: CCTTCCCGCGTCACCTTCTGGTTTAGGGAGCCGTCAGGTCCCTAAACGTTCCCTACAACTTTTTCTGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GCAGTCATCAGAGTGCACAGAAAGCAGCGCTGGCCATaGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCC +
Preference number: 3 (lower is better)
Translates to: AVIRVHRKQRWP*SPFIASLPRNS
Trigger: GGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGATGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCAGAAACAGATGAAGTaGGGACAAAACGCACTGAGC +
Preference number: 3 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCQKQMK*GQNALS
Trigger: GCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR CCA 72 bp GTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTaGGAGGCCAAAATCTACCTGGAAACATCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: VRNCCFSNAALL*EAKIYLETSSS
Trigger: AGAGCTGGATGTTTCCAGGTAGATTTTGGCCTCCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp AAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTaGTCTGGGAGGCCAAAATCTACCTGGAAACATCCA +
Preference number: 3 (lower is better)
Translates to: KELGTVASQMPH*SGRPKSTWKHP
Trigger: TGGATGTTTCCAGGTAGATTTTGGCCTCCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTTATTTGCAGACACTGTaGCTTTTCATCTTTCCCATG +
Preference number: 3 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLYLQTL*LFIFPM
Trigger: CATGGGAAAGATGAAAAGCAACAGTGTCTGCAAATA...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR GCA 72 bp ATAAAAACCATGCTACGAACCATTAGGCAAACATCATaGTTCAGCCCAGTCACAGTTAGATACAAACACGGC +
Preference number: 3 (lower is better)
Translates to: IKTMLRTIRQTS*FSPVTVRYKHG
Trigger: GCCGTGTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTAGCATGGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTTATACAAAACTCTCCTaGGTCTCCTGGGGCCATACT +
Preference number: 3 (lower is better)
Translates to: KCHDVVSKTREQQTYLESYTKLS*VSWGHT
Trigger: AGTATGGCCCCAGGAGACCAAGGAGAGTTTTGTATA...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR TCA 72 bp AGGCATGGCCAAGTTTGTCAAGTATTAAGGTGGTGGTaGTTTCATTATCATGATAACAAAAGGCTGTTGTGT +
Preference number: 3 (lower is better)
Translates to: RHGQVCQVLRWW*FHYHDNKRLLC
Trigger: ACACAACAGCCTTTTGTTATCATGATAATGAAATCACCACCACCTTAATACTTGACAAACTTGGCCATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426596.1
3UTR CCA 72 bp GCTGTTGTGTTCACTTTCTGTGCGATAATTAATTTCTaGGAACTGTCTTCCAGAGCTGGTTTACTTTCATTA +
Preference number: 3 (lower is better)
Translates to: AVVFTFCAIINF*ELSSRAGLLSL
Trigger: TAATGAAAGTAAACCAGCTCTGGAAGACAGTTCCCAGAAATTAATTATCGCACAGAAAGTGAACACAACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
3UTR-3UTR CAA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAACTTCAGCTCAGTTATaGGAGTTGATTGTCTTAACA +
Preference number: 3 (lower is better)
Translates to: INKKAPGDSKDAFISCDITSAQL*ELIVLT
Trigger: TGTTAAGACAATCAACTCCAATAACTGAGCTGAAGT...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
3UTR-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGACTTCAGCTCAGTTATaGGAGTTGATTGTCTTAACA +
Preference number: 3 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWTSAQL*ELIVLT
Trigger: TGTTAAGACAATCAACTCCAATAACTGAGCTGAAGT...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGCCTCCGTTCCGCCCTaGGGGAGGCGCGGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGASVPP*GRRGAL
Trigger: CAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTGGTGCGCTCCAGGATaGGGGGCGTGCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVWCAPG*GACWGP
Trigger: GGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGTGGTGGGTCCCACGTaGCCTCCAGCTGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGVVGPT*PPAGWP
Trigger: CGGCCAGCCAGCTGGAGGTCACGTGGGACCCACCAC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGCAGCCGTGGAGGGGTTaGTGGGCTCCCCGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGQPWRG*WAPRSP
Trigger: CGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTG...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGACCGCCTCGTACCTGTaGGGCGCAGGTGCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQTASYL*GAGARP
Trigger: GGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGT...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGACCGCCTCGTACCTGTaGGGCGCAGGTGCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVTASYL*GAGARP
Trigger: GGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGT...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGGTGGTGATGACCGGGTaGAGCTGCGCGCCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQVVMTG*SCAPAS
Trigger: CGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCAC...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGCCCAGAAGGTGGCCGTaGAGGAGGCCGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVPRRWP*RRPRGC
Trigger: ACACCCCCTCGGCCTCCTGCACGGCCACCTTCTGGG...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCGTTCTGCGGGGCCATaGCCGGGGCAGCCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVRSAGP*PGQPRR
Trigger: TCGGCGAGGCTGCCCCGGCCATGGCCCCGCAGAACG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCCTGCAGGATGCCGTTaGCCGCCGCAGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVPAGCR*PPQARP
Trigger: GGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCGGTCACTGCCCTGCTaGAGACGCCCAGACCGGCCC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCRSLPC*RRPDRP
Trigger: GGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGACCG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACGCTGACAGCCTCGGCTaGCACGTTCTCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDADSLG*HVLRGG
Trigger: GCCGCCCCTGAGAACGTGTCAGCCGAGGCTGTCAGC...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCCAGCTGGCTGGCCGTaGGTGGGGTCACCTGCACGT +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQPAGWP*VGSPAR
Trigger: ACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGCGGCTGGCCCGGCTGTaGTATTGGCTTGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGRLARL*YWLGAR
Trigger: CCGAGCTCCAAGCCAATATCACAGCCGGGCCAGCCG...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTAGGAGGAGAAGCCGGTaGGCGGAGTTCGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAARRRSR*AEFARR
Trigger: CCGGCGCGCGAACTCCGCTCACCGGCTTCTCCTCCT...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGGAGCCGGAGGCTGCGTaGGGTCACTTCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQEPEAA*GHFCLG
Trigger: CCCCAGGCAGAAGTGACCGCACGCAGCCTCCGGCTC...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGCAGGTGCGCGGCCCTaGGCCCTGCGCTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCAGARP*ALRFHE
Trigger: CTCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGCCGTTTGCCGTGCACTaGGGGGCACTGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGPFAVH*GALTGW
Trigger: CCACCCTGTCAGTGCCCCCCAGTGCACGGCAAACGG...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGGTGTGTGGCGTCGCTaGGACAGATCCCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCGVWRR*DRSRGL
Trigger: GAGCCCCCGGGATCTGTCTCAGCGACGCCACACACC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCGGAGCAAGTGCAGCTaGAGCGCCAGCAGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAARSKCS*SASSAH
Trigger: GTGGGCGCTGCTGGCGCTGCAGCTGCACTTGCTCCG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGAGCGCCCGGAGCAAGTaGAGCTGCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVSARSK*SCSASS
Trigger: GCTGCTGGCGCTGCAGCTGCACTTGCTCCGGGCGCT...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTGTGTGGCACCACAGTaGAGCGTGGCCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQCVAPQ*SVAVVP
Trigger: GGGGACCACGGCCACGCTGCACTGTGGTGCCACACA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGTTCACGGCTTCCGTCTaGACGTTCTGCGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQFTASV*TFCGGA
Trigger: CGCGCCCCCGCAGAACGTGCAGACGGAAGCCGTGAA...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGAGCCTCGGGGGCATCTaGCGGCCATGCCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVSLGGI*RPCQKL
Trigger: AAGCTTCTGGCATGGCCGGCAGATGCCCCCGAGGCT...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACAGGTGTGGGGGCTGCTaGTGGCCAGGCGGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDRCGGC*WPGGRQ
Trigger: TTGCCTACCGCCTGGCCAGCAGCAGCCCCCACACCT...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGTGGTGATGACCGGGTaGAGCTGCGCGCCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCVVMTG*SCAPAS
Trigger: CGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCAC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTGTACCACTGGAGGGTaGGAAGGGGGACCCCCATGG +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVCTTGG*EGGPPW
Trigger: CCATGGGGGTCCCCCTTCCCACCCTCCAGTGGTACA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGTGTGGGGGCTGCTGCTaGCCAGGCGGTAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGCGGCC*PGGRQS
Trigger: AGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACA...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACCGGGGATCCCTCGGCTaGCCCGGCTGTGATATTGGC +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDRGSLG*PGCDIG
Trigger: GCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCG...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCCGTGGAGGGGTTGCTaGGCTCCCCGTAGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCPWRGC*APRSPP
Trigger: AGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGCCGGGGTGGGGACCTaGTCCCGTTCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGAGVGT*SRSSWR
Trigger: TCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGAGAGGGCCAGCGTGGTaGCTTCCAGCCCTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVRGPAW*LPALRG
Trigger: GCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCT...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGCCACTGGCCGCTGGGTaGACACTGGAGCGATATTGG +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVPLAAG*TLERYW
Trigger: CCAATATCGCTCCAGTGTTCACCCAGCGGCCAGTGG...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGTGGCAGTACGGACCGTaGCGCTGGTTGGAGCCACGT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQWQYGP*RWLEPR
Trigger: ACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCA...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACTCTCCAGCCGGTCACTaGCGACTTGGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDSPAGH*RLGPLL
Trigger: CAGCAGTGGCCCAAGTCGTCAGTGACCGGCTGGAGA...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGTCTGGTACCCCAGGATaGTGCCGTTGGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQSGTPG*CRWAPP
Trigger: CGGAGGAGCCCAACGGCATCATCCTGGGGTACCAGA...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCCAGGTCGGTGGCTGTaGACTGCCTCACTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAPGRWL*TASLWR
Trigger: GCGCCACAGTGAGGCAGTTCACAGCCACCGACCTGG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGGGCCCTGCGCTTCCATaGGTTGTAGTAGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVGPALP*VVVGGV
Trigger: GACCCCACCTACTACAACTCATGGAAGCGCAGGGCC...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCGTGTCCCGCGGAGTTaGCCGTGTGCTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVRVPRS*PCAVFG
Trigger: CCCGAACACAGCACACGGTCAACTCCGCGGGACACG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTTGTGTGGCACCACAGTaGAGCGTGGCCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAACVAPQ*SVAVVP
Trigger: GGGGACCACGGCCACGCTGCACTGTGGTGCCACACA...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGAGCCTCGGGGGCATCTaGCGGCCATGCCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQSLGGI*RPCQKL
Trigger: AAGCTTCTGGCATGGCCGGCAGATGCCCCCGAGGCT...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGAACTTGCGCAGGCCTaGCAGCAGGGCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVELAQA*QQGRLR
Trigger: ACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTC...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGCAGCCTGAAGATGTATaGGGACTCCGGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVQPEDV*GLRGQV
Trigger: GACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTG...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGATAGCCCTGCAGGATaGCGTTGGCCGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAADSPAG*RWPPQA
Trigger: AGCCTGCGGCGGCCAACGGCATCCTGCAGGGCTATC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCATGACCGGGTGCAGCTaGGCGCCCGCCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTMTGCS*APASEP
Trigger: GGGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCAT...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCCCAGAAGGTGGCCGTaGAGGAGGCCGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCPRRWP*RRPRGC
Trigger: ACACCCCCTCGGCCTCCTGCACGGCCACCTTCTGGG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACTGTACCACTGGAGGGTaGGAAGGGGGACCCCCATGG +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDCTTGG*EGGPPW
Trigger: CCATGGGGGTCCCCCTTCCCACCCTCCAGTGGTACA...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTGCGCAGGCCTCCGCTaGCGAGCACTTTGTATCGAG +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVCAGLR*RALCIE
Trigger: CTCGATACAAAGTGCTCGCCAGCGGAGGCCTGCGCA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGCACCAGGAGCTCTCTaGGGGGTGCCGGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEAPGAL*GVPAAL
Trigger: GAGAGCGGCCGGCACCCCCCAGAGAGCTCCTGGTGC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCACGGGCGCGCTGGCTaGGCTCTCGCCGATGATGTT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAHGRAG*ALADDV
Trigger: AACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACCTGGCTGGCCGTGAGTaGGGTCACCTGCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDLAGRE*GHLHVL
Trigger: CAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAG...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGTGGATGTTCCCATTCTaGCTCTCCGGGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGWMFPF*LSGGGG
Trigger: CCCACCACCCCCGGAGAGCCAGAATGGGAACATCCA...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCGGGGATCCCTCGGCTaGCCCGGCTGTGATATTGGC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVRGSLG*PGCDIG
Trigger: GCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGGCGCGTTCCGTGTGTaGCCATCTGGGTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVGAFRV*PSGSPL
Trigger: GAGAGGGGACCCAGATGGCCACACACGGAACGCGCC...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCAGGCCACTCACGGTaGCGCCTGTCATCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCSGHSR*RLSSQG
Trigger: GCCCTGAGATGACAGGCGTCACCGTGAGTGGCCTGA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTGTTCAGGGTGTGCGTaGGACGAGAGTCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVCSGCA*DESRSC
Trigger: GCAGGAACGACTCTCGTCTCACGCACACCCTGAACA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTGGCAGTACGGACCGTaGCGCTGGTTGGAGCCACGT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCWQYGP*RWLEPR
Trigger: ACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCTTGGCCTCAGTGCCTaGCCCGGCTTCATACTCCAG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQLGLSA*PGFILQ
Trigger: CTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGTGGTGGGTCCCACGTaGCCTCCAGCTGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRVVGPT*PPAGWP
Trigger: CGGCCAGCCAGCTGGAGGTCACGTGGGACCCACCAC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTAGGTCACTCCCTTGGTaGGGTCCCGCACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAARSLPW*GPAPSA
Trigger: GGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCT...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACCTGCCGACTTCTCCTTaGGGCTCACGCTCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDLPTSP*GSRSRS
Trigger: TGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAG...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCGTGTCCCGCGGAGTTaGCCGTGTGCTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCRVPRS*PCAVFG
Trigger: CCCGAACACAGCACACGGTCAACTCCGCGGGACACG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAACCCGGGACCCGGGCTaGGGGGTGGACCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSTRDPG*GVDHGS
Trigger: GCTGCCATGGTCCACCCCTCAGCCCGGGTCCCGGGT...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCTCCTGGCCACTCCGTaGCCACATCCTTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVLLATP*PHPCRV
Trigger: CACCCTGCAAGGATGTGGTCACGGAGTGGCCAGGAG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTATGCTACCAGGACGCTaGCCCACGGGGAGCCACACT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCMLPGR*PTGSHT
Trigger: AGTGTGGCTCCCCGTGGGTCAGCGTCCTGGTAGCAT...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGACGCAGCTTCTGGATaGGCAGGCCTCCGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCDAASG*AGLRWR
Trigger: TCGCCAGCGGAGGCCTGCGCATCCAGAAGCTGCGTC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGGTGTACTCGGTCACTaGCCTGCTGAAGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQGVLGH*PAEDAQ
Trigger: CTGGGCGTCTTCAGCAGGGCAGTGACCGAGTACACC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGGGTGTACTCGGTCACTaGCCTGCTGAAGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQGVLGH*PAEDAQ
Trigger: CTGGGCGTCTTCAGCAGGGCAGTGACCGAGTACACC...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGAAGTCACCAGGCCAGTaGCCACGGCAGTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVKSPGQ*PRQSQR
Trigger: CCGCTGTGACTGCCGTGGGCACTGGCCTGGTGACTT...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGCCGATAGCTCCCACCTaGCCCTCAACAATCCACCTG +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVPIAPT*PSTIHL
Trigger: CAGGTGGATTGTTGAGGGGCAGGTGGGAGCTATCGG...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCAGGTGTGGGGGCTGCTaGTGGCCAGGCGGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCRCGGC*WPGGRQ
Trigger: TTGCCTACCGCCTGGCCAGCAGCAGCCCCCACACCT...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGACTGGAGCCGGAGGCTaGGTGCGGTCACTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVTGAGG*VRSLLP
Trigger: AGGCAGAAGTGACCGCACGCAGCCTCCGGCTCCAGT...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGTCACCTGCACGTTCTaGGGGGCCATGGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARVTCTF*GAMAGA
Trigger: TGCCCCGGCCATGGCCCCGCAGAACGTGCAGGTGAC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTTGGTGGGTGCGCCCCTaGTGGGGGTCACTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAWWVRP*WGSLLG
Trigger: ACCTAAGAGTGACCCCCAGCAGGGGCGCACCCACCA...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCCACGGTCACCACCTTaGTCACCCCTTGTACAGGGG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQPRSPP*SPLVQG
Trigger: CCCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTGG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCGCGGCCCTGGGCCCTaGGCTTCCATGAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCRGPGP*ASMSCS
Trigger: ACTACAACTCATGGAAGCGCAGGGCCCAGGGCCGCG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAATGACCGGGTGCAGCTaGGCGCCCGCCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGMTGCS*APASEP
Trigger: GGGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCAT...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGGGGACGGCCTGGTGTaGACGAGGCGAGTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHGDGLV*TRRVGS
Trigger: GCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGAGAAGCGGTGGCTGCTaGGAGCAGCCAGCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVRSGGC*EQPAEA
Trigger: GGCTTCTGCTGGCTGCTCGCAGCAGCCACCGCTTCT...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCTGGACGCAGCTTCTaGATGCGCAGGCCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCSGRSF*MRRPPL
Trigger: CAGCGGAGGCCTGCGCATCCAGAAGCTGCGTCCAGA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGCAGGAGGGTGGACGATaGACGTCCGATTCCACACAG +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVQEGGR*TSDSTQ
Trigger: CTGTGTGGAATCGGACGTCCATCGTCCACCCTCCTG...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGTGGTCCTCAGGAGGGTaGACGATGGACGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGWSSGG*TMDVRF
Trigger: GAATCGGACGTCCATCGTCCACCCTCCTGAGGACCA...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGCCCTTAATCACCACGTaGTCCTCAGGAGGGTGGACG +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGPLITT*SSGGWT
Trigger: CGTCCACCCTCCTGAGGACCACGTGGTGATTAAGGG...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGTCGCCTGACCACGTCTaGCTGATGAGAAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQSPDHV*LMRRDP
Trigger: CGGGTCCCTTCTCATCAGCCAGACGTGGTCAGGCGA...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGTCTGCGGGGGCGCGGTaGGCACTCCCTGCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVESAGAR*ALPARC
Trigger: ACACCTTGCAGGGAGTGCCCACCGCGCCCCCGCAGA...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGCCACTGCTGAGGACTaGAGGTCTGAGCGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQATAED*RSERQY
Trigger: GTACTGGCGCTCAGACCTCCAGTCCTCAGCAGTGGC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGTTCCCTCGCACGATGTaGCTCCTGGGCTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVFPRTM*LLGSGS
Trigger: GGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAA...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTTCCCTCGCACGATGTaGCTCCTGGGCTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCFPRTM*LLGSGS
Trigger: GGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTTTCCCTCGCACGATGTaGCTCCTGGGCTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAFPRTM*LLGSGS
Trigger: GGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAA...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCACGAGCCTCACTGGTaGGCCTGGGGCATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQHEPHW*AWGIVF
Trigger: AAAGACGATGCCCCAGGCCCACCAGTGAGGCTCGTG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCTGCCCGGGACCCACTaGAGCCGGAGGCTGCGTGCG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCLPGTH*SRRLRA
Trigger: CGCACGCAGCCTCCGGCTCCAGTGGGTCCCGGGCAG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGGAACATCCTGCAGCGTaGTCACCGCCTCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVEHPAA*SPPLSL
Trigger: CAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTC...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCACGGGCGCGCTGGCTaGGCTCTCGCCGATGATGTT +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCHGRAG*ALADDV
Trigger: AACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGCTCTCCGGGGGTGGTaGGTCCCACGTGACCTCCAG +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEALRGW*VPRDLQ
Trigger: CTGGAGGTCACGTGGGACCCACCACCCCCGGAGAGC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCTGGCTCTCCGGGGGTaGTGGGTCCCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVELALRG*WVPRDL
Trigger: GAGGTCACGTGGGACCCACCACCCCCGGAGAGCCAG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACTGGATGTTCCCATTCTaGCTCTCCGGGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDWMFPF*LSGGGG
Trigger: CCCACCACCCCCGGAGAGCCAGAATGGGAACATCCA...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGGGGCTAGGCCGGGGTaGGGACCTGGTCCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARGARPG*GPGPVL
Trigger: AAGAACGGGACCAGGTCCCCACCCCGGCCTAGCCCC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGAGAAACCCAGGGCTaGGGAGGTCTGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAGETQG*GGLRSS
Trigger: GGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGAGGAGAGGGCCAGCGTaGTGGCTTCCAGCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQRRGPA*WLPALR
Trigger: TCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCT...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTAGGGAGGGGACGGCCTaGTGTGCACGAGGCGAGTCG +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARREGTA*CARGES
Trigger: CGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCT...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGATGTGGCCAGGAGACTaGCTCCTGGGTGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQMWPGD*LLGGTG
Trigger: ACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACAT...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTCAGACGGAGCCTCCTaGCCACTCCGTGACCACATC +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQSDGAS*PLRDHI
Trigger: GATGTGGTCACGGAGTGGCCAGGAGGCTCCGTCTGA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGCACACCCATCCCTGTaGCTCAGACGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCAHPSL*LRRSLL
Trigger: CAGGAGGCTCCGTCTGAGCCACAGGGATGGGTGTGC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCTGGAATCTCTGCCCTaGCACCCCAGGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCLESLP*HPRRRE
Trigger: CTCCCTCCTCCTGGGGTGCCAGGGCAGAGATTCCAG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCCTGGCAGCTCTCTCTaGGCTCACCTGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQPGSSL*AHLPGI
Trigger: GATTCCAGGCAGGTGAGCCCAGAGAGAGCTGCCAGG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCCTGGCAGCTCTCTCTaGGCTCACCTGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQPGSSL*AHLPGI
Trigger: GATTCCAGGCAGGTGAGCCCAGAGAGAGCTGCCAGG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGTGCCGGCATCCTGGATaGAGACGGGCGCGATCTGTA +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVCRHPG*RRARSV
Trigger: TACAGATCGCGCCCGTCTTCATCCAGGATGCCGGCA...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCCAAACGTAGCGGAGTaGAACCCGGGGGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQPNVAE*NPGVMC
Trigger: ACACATGACCCCCGGGTTTCACTCCGCTACGTTTGG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGTGGACCATAATGGACTaGTTAGTCCGCCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGWTIMD*LVRPLA
Trigger: GGCCAGTGGGCGGACTAATCAGTCCATTATGGTCCA...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCGGTCACTGCCCTGCTaGAGACGCCCAGACCGGCCC +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCRSLPC*RRPDRP
Trigger: GGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGACCG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGGGTTCCCGTTGTACTaGGAATCCGGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCGFPLY*ESGRGT
Trigger: GGTGCCCCTGCCGGATTCTCAGTACAACGGGAACCC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCCAGCTCCTCGATGGTaGATTCTCTCTCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQPAPRW*ILSPAG
Trigger: ACCGGCTGGAGAGAGAATTCACCATCGAGGAGCTGG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCTATCCGCACGGAGGTaGGTCTCACTTCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQLSARR*VSLRGT
Trigger: TGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGTCGCCTCATGGCTaGTGGACGAGGAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQLSPHG*WTRSRS
Trigger: AGACCTACTCCTCGTCCATCAGCCATGAGGCGACAG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCACCGCCTCTGTCTCTaGACTGAAGTCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQHRLCL*TEVTVP
Trigger: GGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGGTGTGTGGCGTCGCTaGGACAGATCCCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRGVWRR*DRSRGL
Trigger: GAGCCCCCGGGATCTGTCTCAGCGACGCCACACACC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCCAGCTGGCTGGCCGTaGGTGGGGTCACCTGCACGT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTPAGWP*VGSPAR
Trigger: ACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCGCCCCAGGACACGTTaGGCGTGGTGGAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQRPRTR*AWWRLF
Trigger: AAATAACCTCCACCACGCTCAACGTGTCCTGGGGCG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGCTCGGGCCCGTAGGTaGTGGTCCGCGCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTARARR*WSALGH
Trigger: GTGTCCAAGCGCGGACCATCACCTACGGGCCCGAGC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGAGCTTATCCAGGCTaGGGGTGTAGGATGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAGAYPG*GCRMWR
Trigger: GCGCCACATCCTACACCCTCAGCCTGGATAAGCTCC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGCAGATGTCCTCGTCTaGGTAGTGCAGGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARADVLV*VVQAAG
Trigger: CCCGGCGGCCTGCACTACTCAGACGAGGACATCTGC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGCCCTGCGCTTCCATaGGTTGTAGTAGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAGPALP*VVVGGV
Trigger: GACCCCACCTACTACAACTCATGGAAGCGCAGGGCC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGAGCGCCCGGAGCAAGTaGAGCTGCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRSARSK*SCSASS
Trigger: GCTGCTGGCGCTGCAGCTGCACTTGCTCCGGGCGCT...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACCCACCACACTTCTGTTaGCCGGGGGAACCACAATGG +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDPPHFC*PGEPQW
Trigger: CCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGG...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCGCTGTACTGGCCCCTaGCCACTTCATTCACCGCGC +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCRCTGP*PLHSPR
Trigger: GCGCGGTGAATGAAGTGGGCAGGGGCCAGTACAGCG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGCGGTGGGCACTCCCTaGAAGGTGTACTCGGTCACT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCAVGTP*KVYSVT
Trigger: AGTGACCGAGTACACCTTGCAGGGAGTGCCCACCGC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCCAGGGGCTCCTaGCAGCTGACCTTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVFSRGS*QLTLRD
Trigger: ATCTCTCAAGGTCAGCTGGCAGGAGCCCCTGGAGAA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGTGCTGTTCAGGGTGTaGGTGAGACGAGAGTCGTTC +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGVLFRV*VRRESF
Trigger: GAACGACTCTCGTCTCACGCACACCCTGAACAGCAC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGCCAGCAGGGCCGACTaGGTGTGGTTCCCTCGCACG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRASRAD*VWFPRT
Trigger: CGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGAGCCGGAGGCTGCGTaGGGTCACTTCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTEPEAA*GHFCLG
Trigger: CCCCAGGCAGAAGTGACCGCACGCAGCCTCCGGCTC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGGGCAGCTCTCGCACCTaGATGGTGAAGTACCGGATG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQGSSRT*MVKYRM
Trigger: CATCCGGTACTTCACCATGCAGGTGCGAGAGCTGCC...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTCACCTGCACGTTCTaGGGGGCCATGGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTVTCTF*GAMAGA
Trigger: TGCCCCGGCCATGGCCCCGCAGAACGTGCAGGTGAC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGGTGGGTGCGCCCCTaGTGGGGGTCACTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCWWVRP*WGSLLG
Trigger: ACCTAAGAGTGACCCCCAGCAGGGGCGCACCCACCA...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCCACGGTCACCACCTTaGTCACCCCTTGTACAGGGG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCPRSPP*SPLVQG
Trigger: CCCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTGG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCAGCCGTGGAGGGGTTaGTGGGCTCCCCGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCQPWRG*WAPRSP
Trigger: CGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCACGCCGCCCGCGCTCTaGGTGGTGATGACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCTPPAL*VVMTGC
Trigger: GCACCCGGTCATCACCACGCAGAGCGCGGGCGGCGT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCCCAGGCCCCGGAGGTaGCAAGCCATTGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARPRPRR*QAIAPV
Trigger: CACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGGGACGGCCTGGTGTaGACGAGGCGAGTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSGDGLV*TRRVGS
Trigger: GCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCC...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGAGTGGGCACCAGCAGTaGTCCCGTTCCATCCAGACC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVSGHQQ*SRSIQT
Trigger: GGTCTGGATGGAACGGGAGCACTGCTGGTGCCCACT...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCGGTTCCCTTCCAGGTaGATCTGTGGTAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAARFPSR*ICGRPG
Trigger: GCCAGGCCTACCACAGATCCACCTGGAAGGGAACCG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCGCCTCGCAGACGTATaGCCCGGTGTCCGCGGACGT +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRRLADV*PGVRGR
Trigger: ACGTCCGCGGACACCGGGCCATACGTCTGCGAGGCG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACGTGTCCACTGGCCGCTaGGTGAACACTGGAGCGATA +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDVSTGR*VNTGAI
Trigger: TATCGCTCCAGTGTTCACCCAGCGGCCAGTGGACAC...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGGTGATGTTCCGCTGCTaGTACTCTCCGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQVMFRC*YSPGRP
Trigger: TGGCCTTCCCGGAGAGTACCAGCAGCGGAACATCAC...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACGTGATGTTCCGCTGCTaGTACTCTCCGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDVMFRC*YSPGRP
Trigger: TGGCCTTCCCGGAGAGTACCAGCAGCGGAACATCAC...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGACCGTGACGCTGGTTaGAGCCACGTCGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTDRDAG*SHVGWG
Trigger: GCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGCGGGATCCAGGTCTTTaGCCCGGAACAGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVRDPGL*PGTGSC
Trigger: ACAAGATCCTGTTCCGGGCCAAAGACCTGGATCCCG...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTCAGGACAGAGGACGTaGTGTGTGGCGTCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQSGQRT*CVASLR
Trigger: TCTCAGCGACGCCACACACCACGTCCTCTGTCCTGA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCTGGCTGGCCGTGAGTaGGGTCACCTGCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCLAGRE*GHLHVL
Trigger: CAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGCAGACTCCTCCATGGTaGAGATCCCCTTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGQTPPW*RSPFLC
Trigger: GCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTG...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGCCGGGGTGGGGACCTaGTCCCGTTCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCAGVGT*SRSSWR
Trigger: TCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGGGGCTAGGCCGGGGTaGGGACCTGGTCCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRGARPG*GPGPVL
Trigger: AAGAACGGGACCAGGTCCCCACCCCGGCCTAGCCCC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCAGCAGCGCCAGTGGTaGAGAAGCGGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARQQRQW*RSGGCC
Trigger: GCAGCAGCCACCGCTTCTCCACCACTGGCGCTGCTG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCAGCAGCAGCGCCAGTaGTGGAGAAGCGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEQQQRQ*WRSGGC
Trigger: GCAGCCACCGCTTCTCCACCACTGGCGCTGCTGCTG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACCAGGAGACTGGCTCCTaGGTGGCACTGGTCAGATAC +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDQETGS*VALVRY
Trigger: GTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTG...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGAGAGGGGCTTGGGCTaGACCGATTCACCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCERGLG*TDSPRR
Trigger: CCTTCTGGGTGAATCGGTCCAGCCCAAGCCCCTCTC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCCGTGTGTGGCCATCTaGGTCCCCTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTPCVAI*VPSPWG
Trigger: GCCCCAGGGAGAGGGGACCCAGATGGCCACACACGG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGGCGCGTTCCGTGTGTaGCCATCTGGGTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEGAFRV*PSGSPL
Trigger: GAGAGGGGACCCAGATGGCCACACACGGAACGCGCC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCTTCGGCAAGGCAGGTaGGAACAAGGCGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAALRQGR*EQGGSL
Trigger: AAGGGAACCGCCTTGTTCTCACCTGCCTTGCCGAAG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGGATTCTGGAGCCTGCTaGTGGAGATGGCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVDSGAC*WRWHPC
Trigger: ACAAGGATGCCATCTCCATCAGCAGGCTCCAGAATC...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTTTCTCTTTTCCAGGTaGTGGCGGGTTTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQFLFSR*WRVWEP
Trigger: GGGCTCCCAAACCCGCCATCACCTGGAAAAGAGAAA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTCCGATTCCACACAGTaGGCGTGGCCGATGCATTCA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQSDSTQ*AWPMHS
Trigger: TGAATGCATCGGCCACGCTCACTGTGTGGAATCGGA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACTCCGATTCCACACAGTaGGCGTGGCCGATGCATTCA +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDSDSTQ*AWPMHS
Trigger: TGAATGCATCGGCCACGCTCACTGTGTGGAATCGGA...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGTCACCGATGTCGCCTaGCCACGTCTGGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCVTDVA*PRLADE
Trigger: CTCATCAGCCAGACGTGGTCAGGCGACATCGGTGAC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCTCAGGGCCAACGTTTaGCAGATGCACCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQLRANV*QMHLPW
Trigger: CCATGGAAGGTGCATCTGTCAAACGTTGGCCCTGAG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTGGACCATAATGGACTaGTTAGTCCGCCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQWTIMD*LVRPLA
Trigger: GGCCAGTGGGCGGACTAATCAGTCCATTATGGTCCA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCCATTGATAAACTGCTaGGGCGGAGGGTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQPLINC*GGGFHR
Trigger: CCTGTGGAACCCTCCGCCTCAGCAGTTTATCAATGG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGTCTGGTACCCCAGGATaGTGCCGTTGGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVESGTPG*CRWAPP
Trigger: CGGAGGAGCCCAACGGCATCATCCTGGGGTACCAGA...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGCAGCTTGTAGGAGGTaGAGGGCCTCAGTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQAACRR*RASVCQ
Trigger: TTGACAGACTGAGGCCCTTCACCTCCTACAAGCTGC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCACCAGCTGGCTGGCCGTaGGTGGGGTCACCTGCACGT +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSPAGWP*VGSPAR
Trigger: ACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGG...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGCTCGGGCCCGTAGGTaGTGGTCCGCGCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSARARR*WSALGH
Trigger: GTGTCCAAGCGCGGACCATCACCTACGGGCCCGAGC...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCGGCTGGCCCGGCTGTaGTATTGGCTTGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTRLARL*YWLGAR
Trigger: CCGAGCTCCAAGCCAATATCACAGCCGGGCCAGCCG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTACACCACCAGCAGGATaGCGATCAGGCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAATPPAG*RSGWTE
Trigger: CTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGT...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCGTGGCCTCAGATTCTaGTGCATCTGCCGACTTCTC +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQRGLRF*CICRLL
Trigger: GAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCCCTCGCTGTCAGGTaGGAAGGAAGGGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCSLAVR*EGRGKD
Trigger: GTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCTGACAGGGTGGTCTTaGGTCTTGTGTGTGTCACGC +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQLTGWS*VLCVSR
Trigger: GCGTGACACACACAAGACTCAAGACCACCCTGTCAG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACGGCAGGCTCAGCTCATaGGTTTCCACGTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDGRLSS*VSTLSS
Trigger: TGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCC...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGGAGCAAGTGCAGCTaGAGCGCCAGCAGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLRSKCS*SASSAH
Trigger: GTGGGCGCTGCTGGCGCTGCAGCTGCACTTGCTCCG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGACGCAGCTTCTGGATaGGCAGGCCTCCGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTDAASG*AGLRWR
Trigger: TCGCCAGCGGAGGCCTGCGCATCCAGAAGCTGCGTC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTCTCCCCTCCTTCATTaGTGGCGAAGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVSPLLH*WRSTGR
Trigger: TCTTCCAGTGCTTCGCCAGCAATGAAGGAGGGGAGA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGCGGTGGGCACTCCCTaGAAGGTGTACTCGGTCACT +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCAVGTP*KVYSVT
Trigger: AGTGACCGAGTACACCTTGCAGGGAGTGCCCACCGC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGAGACCAGCTGAGGTGTaGTGGGAGGCCCGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRRPAEV*WEARPQ
Trigger: CTGGGGACGGGCCTCCCAGCACACCTCAGCTGGTCT...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCAGACCAGCTGAGGTGTaGTGGGAGGCCCGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTRPAEV*WEARPQ
Trigger: CTGGGGACGGGCCTCCCAGCACACCTCAGCTGGTCT...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCCGATAGCTCCCACCTaGCCCTCAACAATCCACCTG +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAPIAPT*PSTIHL
Trigger: CAGGTGGATTGTTGAGGGGCAGGTGGGAGCTATCGG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGACGGCGTTGAAGGCCTaGATCTGCAGCTCGTATTCC +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQTALKA*ICSSYS
Trigger: GGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGT...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGCAGCTCTCGCACCTaGATGGTGAAGTACCGGATG +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAGSSRT*MVKYRM
Trigger: CATCCGGTACTTCACCATGCAGGTGCGAGAGCTGCC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGTGAGTGGGGTCACCTaGACGTTCTGCGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARVSGVT*TFCGAM
Trigger: CATGGCCCCGCAGAACGTGCAGGTGACCCCACTCAC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGATAGCCCTGCAGGATaGCGTTGGCCGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHDSPAG*RWPPQA
Trigger: AGCCTGCGGCGGCCAACGGCATCCTGCAGGGCTATC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGGGAGACTCAGCCACTaGTGTCATGAGGCATCCGCA +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVGRLSH*CHEASA
Trigger: TGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCCC...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCCGGGGGAACCACAATaGTTGGGGCCATGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCPGEPQ*LGPWFQ
Trigger: CTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGGTCCTCCACAGGCCTaGCACTGGCTATACATTCCA +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQGPPQA*HWLYIP
Trigger: TGGAATGTATAGCCAGTGCCAGGCCTGTGGAGGACC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGGAGCCCTCTGTGTTaGCCGCATAGCAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAGSPLC*PHSRCS
Trigger: ACTACACCTGCTATGCGGCCAACACAGAGGGCTCCC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCAGGAGGGTGGACGATaGACGTCCGATTCCACACAG +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVQEGGR*TSDSTQ
Trigger: CTGTGTGGAATCGGACGTCCATCGTCCACCCTCCTG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCCCTTAATCACCACGTaGTCCTCAGGAGGGTGGACG +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVPLITT*SSGGWT
Trigger: CGTCCACCCTCCTGAGGACCACGTGGTGATTAAGGG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCCCGGGGGTCATGTGTaGCACCACAGTGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRPGGHV*HHSAAW
Trigger: CCACGCTGCACTGTGGTGCCACACATGACCCCCGGG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCCCGGGGGTCATGTGTaGCACCACAGTGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHPGGHV*HHSAAW
Trigger: CCACGCTGCACTGTGGTGCCACACATGACCCCCGGG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGGGAACTGAATGGTGGTaGAGTTCACGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVGTEWW*SSRLPS
Trigger: AGACGGAAGCCGTGAACTCCACCACCATTCAGTTCC...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGGGCACCAGGAAGGTCTaGGGGCACTCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQGTRKV*GHSRRN
Trigger: ATTTCTTCTGGAGTGCCCCCAGACCTTCCTGGTGCC...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTTTTCCCGTCATAGCCTaGCCGGAACTGAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAFPVIA*PELKGG
Trigger: GCCACCCTTCAGTTCCGGCCAGGCTATGACGGGAAA...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGGGATCTCCAGCATCTaGGCATCAGGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQGISSI*ASGSFS
Trigger: GGAGAATGAGCCTGATGCCCAGATGCTGGAGATCCC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGGGGCCTGCAGGGTCTaGATGACCCGGGAAGACGGA +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHGACRV*MTREDG
Trigger: TCCGTCTTCCCGGGTCATCCAGACCCTGCAGGCCCC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTAGGGCCGACTGCGTGTaGTTCCCTCGCACGATGTGG +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARRADCV*FPRTMW
Trigger: CCACATCGTGCGAGGGAACCACACGCAGTCGGCCCT...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCTGGCTCTCCGGGGGTaGTGGGTCCCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLLALRG*WVPRDL
Trigger: GAGGTCACGTGGGACCCACCACCCCCGGAGAGCCAG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGGAGAAACCCAGGGCTaGGGAGGTCTGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEGETQG*GGLRSS
Trigger: GGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACAAGGGTGTGAGCCGCTaGTTCTCTGGAAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDKGVSR*FSGRGG
Trigger: ACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTT...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCACCCGGGCTGAGGGGTaGACCATGGCAGCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCTRAEG*TMAAQS
Trigger: CGACTGGGCTGCCATGGTCCACCCCTCAGCCCGGGT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCTCTCCTTGGTCTCCTaGGGCCATACTCAGCAACGC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAALSLVS*GHTQQR
Trigger: GCGTTGCTGAGTATGGCCCCAGGAGACCAAGGAGAG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGTGTGGAGGCCACTGGTaGTTCTCACTCCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQCGGHW*FSLHSS
Trigger: AGAGGAATGGAGTGAGAATCACCAGTGGCCTCCACA...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGGTTCCACAGGAACTaGATGGTGGTGGAGTTCACG +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAGFHRN*MVVEFT
Trigger: CGTGAACTCCACCACCATTCAGTTCCTGTGGAACCC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGGTAGGTGGTGAGAGATaGGAGGCCTTGGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVVGGER*EALDLV
Trigger: TACAAGATCCAAGGCCTCTCATCTCTCACCACCTAC...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCCTGCAGGGTCTGGATaGCCCGGGAAGACGGACTGT +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRPAGSG*PGKTDC
Trigger: ACAGTCCGTCTTCCCGGGTCATCCAGACCCTGCAGG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGGGTTCCCGTTGTACTaGGAATCCGGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTGFPLY*ESGRGT
Trigger: GGTGCCCCTGCCGGATTCTCAGTACAACGGGAACCC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGGGTTCCCGTTGTACTaGGAATCCGGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHGFPLY*ESGRGT
Trigger: GGTGCCCCTGCCGGATTCTCAGTACAACGGGAACCC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCAGCCCCGACGGCGTTaGAGGCCTGCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCQPRRR*RPASAA
Trigger: AGCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCTG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGCAGCTTGTAGGAGGTaGAGGGCCTCAGTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAAACRR*RASVCQ
Trigger: TTGACAGACTGAGGCCCTTCACCTCCTACAAGCTGC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGGCTCTCGCCGATaGTGTTATAGGCGGTCATTA +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQLGSRR*CYRRSL
Trigger: TAATGACCGCCTATAACATCATCGGCGAGAGCCCAG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACCTGGGCTCTCGCCGATaGTGTTATAGGCGGTCATTA +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDLGSRR*CYRRSL
Trigger: TAATGACCGCCTATAACATCATCGGCGAGAGCCCAG...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGGTGGAGGTTATTTCTaGGAACGCCAGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQGGGYF*ERQKAG
Trigger: CCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGGCTGGCCCGGCTGTaGTATTGGCTTGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLRLARL*YWLGAR
Trigger: CCGAGCTCCAAGCCAATATCACAGCCGGGCCAGCCG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGCAGATGTCCTCGTCTaGGTAGTGCAGGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSADVLV*VVQAAG
Trigger: CCCGGCGGCCTGCACTACTCAGACGAGGACATCTGC...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGACGTGTCCCGCGGAGTTaGCCGTGTGCTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGRVPRS*PCAVFG
Trigger: CCCGAACACAGCACACGGTCAACTCCGCGGGACACG...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCGAAGCAATCTGAAATaGGCCACGTTGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAARSNLK*ATLGVG
Trigger: ACCCACCCCCAACGTGGCTCATTTCAGATTGCTTCG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCTCCTGGCCACTCCGTaGCCACATCCTTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRLLATP*PHPCRV
Trigger: CACCCTGCAAGGATGTGGTCACGGAGTGGCCAGGAG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGAAGACCTGTACAGAGTaGGCCACCTCCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEKTCTE*ATSRGC
Trigger: ACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTAGCGCCCGGAGCAAGTaGAGCTGCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPSARSK*SCSASS
Trigger: GCTGCTGGCGCTGCAGCTGCACTTGCTCCGGGCGCT...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGTCTCCCCTCCTTCATTaGTGGCGAAGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQSPLLH*WRSTGR
Trigger: TCTTCCAGTGCTTCGCCAGCAATGAAGGAGGGGAGA...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTCTCCCCTCCTTCATTaGTGGCGAAGCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQSPLLH*WRSTGR
Trigger: TCTTCCAGTGCTTCGCCAGCAATGAAGGAGGGGAGA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCAGTGAGCGTGGCCGATaGATTCAGGGAGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCSERGR*IQGALC
Trigger: ACAGAGGGCTCCCTGAATGCATCGGCCACGCTCACT...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCGCTGTACTGGCCCCTaGCCACTTCATTCACCGCGC +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRRCTGP*PLHSPR
Trigger: GCGCGGTGAATGAAGTGGGCAGGGGCCAGTACAGCG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCAGGTAGCATCAACCTaGTTGTCTCGGCGCTGTACT +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQQVAST*LSRRCT
Trigger: AGTACAGCGCCGAGACAAGCAGGTTGATGCTACCTG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTTCACGGCTTCCGTCTaGACGTTCTGCGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLFTASV*TFCGGA
Trigger: CGCGCCCCCGCAGAACGTGCAGACGGAAGCCGTGAA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGGCATCTGCCGGCCATaGCAGAAGCTTGTATCCCTG +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCGICRP*QKLVSL
Trigger: CAGGGATACAAGCTTCTGGCATGGCCGGCAGATGCC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGTGGATCTTGTACTCGTaGGTCGTGCTGTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQWILYS*VVLFRV
Trigger: CACCCTGAACAGCACGACGCACGAGTACAAGATCCA...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTACGGCGTTGAAGGCCTaGATCTGCAGCTCGTATTCC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAATALKA*ICSSYS
Trigger: GGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGT...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGAACTTGCGCAGGCCTaGCAGCAGGGCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCELAQA*QQGRLR
Trigger: ACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTCTGTCAACGACGCATaGTGTCGCCTCATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQSVNDA*CRLMAD
Trigger: ATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGTTCTTATTCTGCCCGTaGAGGACGAGGGCGAACACC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVFLFCP*RTRANT
Trigger: GGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAA...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTTCTTATTCTGCCCGTaGAGGACGAGGGCGAACACC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCFLFCP*RTRANT
Trigger: GGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTACGCCGCCCGCGCTCTaGGTGGTGATGACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVTPPAL*VVMTGC
Trigger: GCACCCGGTCATCACCACGCAGAGCGCGGGCGGCGT...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCGGGGAACTGTGGGTTaGGATTCTCATGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQRGTVG*DSHAEV
Trigger: CACTTCTGCATGAGAATCGCAACCCACAGTTCCCCG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTCCAAGAAATTCCAGTaGTCACATCCTGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVSKKFQ*SHPGFP
Trigger: CGGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTTCAGACTGGATCCATaGTACCAGGACGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQFRLDP*YQDADP
Trigger: TGGGTCAGCGTCCTGGTAGCATGGATCCAGTCTGAA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCATCACTGGTTGTGGTaGCGAGGATCACCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQHHWLW*RGSPAD
Trigger: ATCAGCTGGTGATCCTCGCCACCACAACCAGTGATG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCCAAGGTGGTCTCACTaGATCCAGCCACCACACTTC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVPRWSH*IQPPHF
Trigger: GAAGTGTGGTGGCTGGATCCAGTGAGACCACCTTGG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGCATCCTTGTACCACTaGAGGGTGGGAAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARASLYH*RVGRGT
Trigger: GGTCCCCCTTCCCACCCTCCAGTGGTACAAGGATGC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGTCTGGACGCAGCTTCTaGATGCGCAGGCCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRSGRSF*MRRPPL
Trigger: CAGCGGAGGCCTGCGCATCCAGAAGCTGCGTCCAGA...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGTTGCTGGCGAAGCACTaGAAGATTCCGGAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQLLAKH*KIPESS
Trigger: AGAGGACTCCGGAATCTTCCAGTGCTTCGCCAGCAA...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCCTAGACGTGCTCGATaGAGTCAGGGCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCPRRAR*SQGHVV
Trigger: GACAACGTGGCCCTGACTCCATCGAGCACGTCTAGG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACTTTTCGGGGGAGCACTaGGTGGTTCTTCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDFSGEH*VVLQVA
Trigger: TGCTACCTGAAGAACCACCCAGTGCTCCCCCGAAAA...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGTTGTGCTCTGTTTCTaGGGGTGGCTGCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCVVLCF*GWLPLD
Trigger: GTCCAGTGGCAGCCACCCCCAGAAACAGAGCACAAC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGACAGGAACTGAATGGTaGTGGAGTTCACGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQTGTEW*WSSRLP
Trigger: CGGAAGCCGTGAACTCCACCACCATTCAGTTCCTGT...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGCACTCCAGAAGAAATaGTGGATGAAGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGALQKK*WMKSPG
Trigger: GCCTGGTGACTTCATCCACCATTTCTTCTGGAGTGC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGCACCAGGAAGGTCTaGGGGCACTCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAGTRKV*GHSRRN
Trigger: ATTTCTTCTGGAGTGCCCCCAGACCTTCCTGGTGCC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGACCGTGACGCTGGTTaGAGCCACGTCGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPDRDAG*SHVGWG
Trigger: GCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGAGTATGAGCCCATTCTaGTCCTGTTCCGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQSMSPF*SCSGTD
Trigger: ATCCGTGCCGGAACAGGACCAGAATGGGCTCATACT...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCGGGATCCAGGTCTTTaGCCCGGAACAGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVRDPGL*PGTGSC
Trigger: ACAAGATCCTGTTCCGGGCCAAAGACCTGGATCCCG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGAGGGCCGACTGCGTGTaGTTCCCTCGCACGATGTGG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRRADCV*FPRTMW
Trigger: CCACATCGTGCGAGGGAACCACACGCAGTCGGCCCT...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCACGAGCCTCACTGGTaGGCCTGGGGCATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARHEPHW*AWGIVF
Trigger: AAAGACGATGCCCCAGGCCCACCAGTGAGGCTCGTG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTTGTCCCCAATGTCGTTaGTGGCTTTCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAACPQCR*WLSGAA
Trigger: AGCTGCGCCTGAAAGCCACCAACGACATTGGGGACA...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCTCCCGGGGGCTCTCCTaGAACATCCTGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTSRGLS*NILQRG
Trigger: ACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGA...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGGTACTTGGTATGGCTaGTCAGGTTCTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGGTWYG*SGSSAS
Trigger: TGAGGCTGAAGAACCTGACCAGCCATACCAAGTACC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCAGACTCCTCCATGGTaGAGATCCCCTTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAQTPPW*RSPFLC
Trigger: GCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTCACGAAGGAGTGCTTaGGCAGCGCGTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCSRRSA*AARPRS
Trigger: ACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGA...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGCAGGTGCGCGGCCCTaGGCCCTGCGCTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVAGARP*ALRFHE
Trigger: CTCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGC...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTAAGGGTGTGAGCCGCTaGTTCTCTGGAAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCKGVSR*FSGRGG
Trigger: ACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTT...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCACACATCGTCGATGTaGAGCTGCTGTTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQHTSSM*SCCSPS
Trigger: AGACGGTGAACAGCAGCTCCACATCGACGATGTGTG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCACTACCCTCAGGTCACTaGGGGAACGGCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSLPSGH*GNGTCP
Trigger: CGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAG...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGCTCCTGGGTGGCACTaGTCAGATACTGCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCAPGWH*SDTAQL
Trigger: CAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACTCATCCGGGGAACTGTaGGTTGCGATTCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDSSGEL*VAILMQ
Trigger: CTGCATGAGAATCGCAACCCACAGTTCCCCGGATGA...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGAATGCCGCATTGCTCTaGGAGGCCAAAATCTACCTG +
Preference number: 4 (lower is better)
Translates to: QDRGRGRPGVHEASRERVNAALL*EAKIYL
Trigger: CAGGTAGATTTTGGCCTCCCAGAGCAATGCGGCATT...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCTGGGCTCACCTGCCTaGAATCTCTGCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRLGSPA*NLCPGT
Trigger: GGTGCCAGGGCAGAGATTCCAGGCAGGTGAGCCCAG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGCACCTCCCGGGGCTGTaGAGGCGCGTTCCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTHLPGL*RRVPCV
Trigger: CACACACGGAACGCGCCTCCACAGCCCCGGGAGGTG...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCCTCACCTTTCAGACTaGATCCATGCTACCAGGACG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQPHLSD*IHATRT
Trigger: CGTCCTGGTAGCATGGATCCAGTCTGAAAGGTGAGG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCCTCACCTTTCAGACTaGATCCATGCTACCAGGACG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQPHLSD*IHATRT
Trigger: CGTCCTGGTAGCATGGATCCAGTCTGAAAGGTGAGG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 72 bp CTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTaGTCCCCTACCCTCAGGTCACTGGGGGAACGGCAC +
Preference number: 4 (lower is better)
Translates to: LAPGWHWSDTAQ*SPTLRSLGERH
Trigger: GTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGATCGCTGCACGTCCTTaGGAAACTGTTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQIAARP*ETVFLW
Trigger: CCAGAGGAAAACAGTTTCTCAAGGACGTGCAGCGAT...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGATCGCTGCACGTCCTTaGGAAACTGTTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQIAARP*ETVFLW
Trigger: CCAGAGGAAAACAGTTTCTCAAGGACGTGCAGCGAT...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGGGACCCCCATGGCTTaGCATCCGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEGTPMA*HPMSTV
Trigger: AACTGTGGACATCGGATGTCAAGCCATGGGGGTCCC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCCACTGGCCGCTGGGTaGACACTGGAGCGATATTGG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRPLAAG*TLERYW
Trigger: CCAATATCGCTCCAGTGTTCACCCAGCGGCCAGTGG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGTGTTCAGGGTGTGCGTaGGACGAGAGTCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVECSGCA*DESRSC
Trigger: GCAGGAACGACTCTCGTCTCACGCACACCCTGAACA...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCACCGCCTCTGTCTCTaGACTGAAGTCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARHRLCL*TEVTVP
Trigger: GGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCGCCCCAGGACACGTTaGGCGTGGTGGAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVERPRTR*AWWRLF
Trigger: AAATAACCTCCACCACGCTCAACGTGTCCTGGGGCG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTTGCAAAGATGACGTaGGGGGCTGGAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTVAKMT*GAGGMA
Trigger: GGCCATGCCTCCAGCCCCTCACGTCATCTTTGCAAC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCGTCTGTTGCAAAGATaGCGTGAGGGGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVERLLQR*REGLEA
Trigger: TGCCTCCAGCCCCTCACGTCATCTTTGCAACAGACG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCACTGTCCACTGTGGTaGGTCTCATCCGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEHCPLW*VSSGEL
Trigger: CAGTTCCCCGGATGAGACTCACCACAGTGGACAGTG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGGAGCAACATCATCTTaGGCCAGCGCCCGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRGATSS*ASARSK
Trigger: CTTGCTCCGGGCGCTGGCGCAAGATGATGTTGCTCC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389531.7
ENST00000404826.7
CDS-3UTR GCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCGCAACACCCCGTTGTaGTCTGTTTCTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHRNTPL*SVSGGG
Trigger: GCCACCCCCAGAAACAGAGCACAACGGGGTGTTGCG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGACGAGAGTCGTTCCTaGCGTACACTTCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVDESRS*RTLPKR
Trigger: TCTCTTGGGAAGTGTACGGCAGGAACGACTCTCGTC...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAAAGTCACCAGGCCAGTaGCCACGGCAGTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSKSPGQ*PRQSQR
Trigger: CCGCTGTGACTGCCGTGGGCACTGGCCTGGTGACTT...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGGCTCCTCCGGAGGTTaGCACACTATCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLGSSGG*HTIRTE
Trigger: CTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCC...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTAGGTGTGGGGGCTGCTaGTGGCCAGGCGGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPRCGGC*WPGGRQ
Trigger: TTGCCTACCGCCTGGCCAGCAGCAGCCCCCACACCT...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTCGGTGGCTGTGAACTaGCTCACTGTGGCGCCGACC +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLSVAVN*LTVAPT
Trigger: GGTCGGCGCCACAGTGAGGCAGTTCACAGCCACCGA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGTGAGTGGGGTCACCTaGACGTTCTGCGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCVSGVT*TFCGAM
Trigger: CATGGCCCCGCAGAACGTGCAGGTGACCCCACTCAC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTACCTTCAGCCAGCGCTaGCAGTTCCCTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARTFSQR*QFPLTS
Trigger: GGAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGT...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGTGGTTCACGAAGGAGTaGTTGGGCAGCGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRWFTKE*LGSASS
Trigger: CGAGGACGCGCTGCCCAAGCACTCCTTCGTGAACCA...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCGCGGCCCTGGGCCCTaGGCTTCCATGAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCRGPGP*ASMSCS
Trigger: ACTACAACTCATGGAAGCGCAGGGCCCAGGGCCGCG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTAGGGGCCACACTTTCTaGATGTGGCCAGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARRGHTF*MWPGDW
Trigger: CCAGTCTCCTGGCCACATGCAGAAAGTGTGGCCCCT...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCTGTTGCTTCTCAAATaGCGCATTGCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVLLLLK*RIALGG
Trigger: GCCTCCCAGAGCAATGCGGCATTTGAGAAGCAACAG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGGGAACCACAATGGTTaGGGCCATGGTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCGNHNG*GHGFRC
Trigger: ACACCTGAAACCATGGCCCCAACCATTGTGGTTCCC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTGTACCACTGGAGGGTaGGAAGGGGGACCCCCATGG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLCTTGG*EGGPPW
Trigger: CCATGGGGGTCCCCCTTCCCACCCTCCAGTGGTACA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGCCACTGGCCAGAATGTaGTTTTCTCTTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGPLARM*FSLFQV
Trigger: CACCTGGAAAAGAGAAAACCACATTCTGGCCAGTGG...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCCCTTAATCACCACGTaGTCCTCAGGAGGGTGGACG +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEPLITT*SSGGWT
Trigger: CGTCCACCCTCCTGAGGACCACGTGGTGATTAAGGG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTACCACGGCGTGGCTGTaGGAAGAATTAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARTTAWL*EELGLT
Trigger: GGTCAGCCCTAATTCTTCCCACAGCCACGCCGTGGT...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTCTGCGGGGGCGCGGTaGGCACTCCCTGCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVSAGAR*ALPARC
Trigger: ACACCTTGCAGGGAGTGCCCACCGCGCCCCCGCAGA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGGAACTGAATGGTGGTaGAGTTCACGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCGTEWW*SSRLPS
Trigger: AGACGGAAGCCGTGAACTCCACCACCATTCAGTTCC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGACTCCGTGGAAATCTaGGGCAATAGTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQDSVEI*GNSDHS
Trigger: ACTGTGGTCACTATTGCCCCAGATTTCCACGGAGTC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCCATGGTGGACTCCGTaGAAATCTGGGGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCPWWTP*KSGAIV
Trigger: CACTATTGCCCCAGATTTCCACGGAGTCCACCATGG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGGTTATGTGTCCATGGTaGACTCCGTGGAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQVMCPW*TPWKSG
Trigger: CCCAGATTTCCACGGAGTCCACCATGGACACATAAC...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGATGTCCCACAGCTCCTaGTTTGTCTTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQMSHSS*FVFLSP
Trigger: TGGACTCAGGAAGACAAACCAGGAGCTGTGGGACAT...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCTCCAGAAGAAATGGTaGATGAAGTCACCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQLQKKW*MKSPGQ
Trigger: CTGGCCTGGTGACTTCATCCACCATTTCTTCTGGAG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGGGATCTCCAGCATCTaGGCATCAGGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCGISSI*ASGSFS
Trigger: GGAGAATGAGCCTGATGCCCAGATGCTGGAGATCCC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCGGGATCCAGGTCTTTaGCCCGGAACAGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCRDPGL*PGTGSC
Trigger: ACAAGATCCTGTTCCGGGCCAAAGACCTGGATCCCG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAAGGGCCGACTGCGTGTaGTTCCCTCGCACGATGTGG +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSRADCV*FPRTMW
Trigger: CCACATCGTGCGAGGGAACCACACGCAGTCGGCCCT...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGCGTTCTGCGGGGCCATaGCCGGGGCAGCCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLRSAGP*PGQPRR
Trigger: TCGGCGAGGCTGCCCCGGCCATGGCCCCGCAGAACG...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGTGGATGTTCCCATTCTaGCTCTCCGGGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRWMFPF*LSGGGG
Trigger: CCCACCACCCCCGGAGAGCCAGAATGGGAACATCCA...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCGTAGTCAGAGTCCGTaGCCTCAGATTCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQRSQSP*PQILMH
Trigger: ATGCATCAGAATCTGAGGCCACGGACTCTGACTACG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACAGGAGAGGGCCAGCGTaGTGGCTTCCAGCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHRRGPA*WLPALR
Trigger: TCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCT...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTGGTGGAGAAGCGGTaGCTGCTGCGAGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPVVEKR*LLRAAS
Trigger: GCTGGCTGCTCGCAGCAGCCACCGCTTCTCCACCAC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCCGTTTGCCGTGCACTaGGGGGCACTGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPPFAVH*GALTGW
Trigger: CCACCCTGTCAGTGCCCCCCAGTGCACGGCAAACGG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCAGGAGACTGGCTCCTaGGTGGCACTGGTCAGATAC +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARQETGS*VALVRY
Trigger: GTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACAAAGCCACATCCTCATaGCTGCAGAGAGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDKATSS*LQRAVI
Trigger: GATGACTGCTCTCTGCAGCCATGAGGATGTGGCTTT...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCTGGAATCTCTGCCCTaGCACCCCAGGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCLESLP*HPRRRE
Trigger: CTCCCTCCTCCTGGGGTGCCAGGGCAGAGATTCCAG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCCGTGTGTGGCCATCTaGGTCCCCTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVPCVAI*VPSPWG
Trigger: GCCCCAGGGAGAGGGGACCCAGATGGCCACACACGG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGGGACCCCCATGGCTTaGCATCCGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHGTPMA*HPMSTV
Trigger: AACTGTGGACATCGGATGTCAAGCCATGGGGGTCCC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCCAAACGTAGCGGAGTaGAACCCGGGGGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTPNVAE*NPGVMC
Trigger: ACACATGACCCCCGGGTTTCACTCCGCTACGTTTGG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCTGTTCAGGGTGTGCGTaGGACGAGAGTCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTCSGCA*DESRSC
Trigger: GCAGGAACGACTCTCGTCTCACGCACACCCTGAACA...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCTATCCGCACGGAGGTaGGTCTCACTTCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHLSARR*VSLRGT
Trigger: TGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCCAGGTCGGTGGCTGTaGACTGCCTCACTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVPGRWL*TASLWR
Trigger: GCGCCACAGTGAGGCAGTTCACAGCCACCGACCTGG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCTTGGCCTCAGTGCCTaGCCCGGCTTCATACTCCAG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCLGLSA*PGFILQ
Trigger: CTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGGTGGAGGTTATTTCTaGGAACGCCAGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCGGGYF*ERQKAG
Trigger: CCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCGCCCCAGGACACGTTaGGCGTGGTGGAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRRPRTR*AWWRLF
Trigger: AAATAACCTCCACCACGCTCAACGTGTCCTGGGGCG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGAGCTTATCCAGGCTaGGGGTGTAGGATGTGGCGC +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSGAYPG*GCRMWR
Trigger: GCGCCACATCCTACACCCTCAGCCTGGATAAGCTCC...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCTGCCGACTTCTCCTTaGGGCTCACGCTCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLLPTSP*GSRSRS
Trigger: TGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCGTGGCCTCAGATTCTaGTGCATCTGCCGACTTCTC +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARRGLRF*CICRLL
Trigger: GAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTGGGACAAAACGCACTaGGCCCAGGGAAAAACGTTT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCWDKTH*AQGKTF
Trigger: AAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCTGACAGGGTGGTCTTaGGTCTTGTGTGTGTCACGC +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARLTGWS*VLCVSR
Trigger: GCGTGACACACACAAGACTCAAGACCACCCTGTCAG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCACTGTCCACTGTGGTaGGTCTCATCCGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHHCPLW*VSSGEL
Trigger: CAGTTCCCCGGATGAGACTCACCACAGTGGACAGTG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAGGCATCCGCAAGGCATaGCTTTCAGCACGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGGIRKA*LSARQE
Trigger: CTCCTGCCGTGCTGAAAGTCATGCCTTGCGGATGCC...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTATGCTACCAGGACGCTaGCCCACGGGGAGCCACACT +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPMLPGR*PTGSHT
Trigger: AGTGTGGCTCCCCGTGGGTCAGCGTCCTGGTAGCAT...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGGCAGGCTCAGCTCATaGGTTTCCACGTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEGRLSS*VSTLSS
Trigger: TGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGACGCAGCTTCTGGATaGGCAGGCCTCCGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVDAASG*AGLRWR
Trigger: TCGCCAGCGGAGGCCTGCGCATCCAGAAGCTGCGTC...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCAGTGAGCGTGGCCGATaGATTCAGGGAGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTSERGR*IQGALC
Trigger: ACAGAGGGCTCCCTGAATGCATCGGCCACGCTCACT...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCAGGTAGCATCAACCTaGTTGTCTCGGCGCTGTACT +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCQVAST*LSRRCT
Trigger: AGTACAGCGCCGAGACAAGCAGGTTGATGCTACCTG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCGTAGAGCACGAACTTaGGCAGGCCTGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPRRART*AGLPAG
Trigger: CCCTGCTGGCAGGCCTGCGCAAGTTCGTGCTCTACG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTACTGGAGCCGGAGGCTaGGTGCGGTCACTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPTGAGG*VRSLLP
Trigger: AGGCAGAAGTGACCGCACGCAGCCTCCGGCTCCAGT...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCTCTCCTGGAACATCCTaGAGCGTGGTCACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTSPGTS*SVVTAS
Trigger: AGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGA...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGAGGTGCCAAGCCATTaGACCAGTGAAATACACCTT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQEVPSH*TSEIHL
Trigger: AAGGTGTATTTCACTGGTGCAATGGCTTGGCACCTC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCCAAGAAATTCCAGTaGTCACATCCTGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCSKKFQ*SHPGFP
Trigger: CGGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGACTCTCTGGGCTCACCTaGCTGGAATCTCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGLSGLT*LESLPW
Trigger: CCAGGGCAGAGATTCCAGGCAGGTGAGCCCAGAGAG...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCACGGTTCCCTTCCAGGTaGATCTGTGGTAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSRFPSR*ICGRPG
Trigger: GCCAGGCCTACCACAGATCCACCTGGAAGGGAACCG...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCGGCATCACTGGTTGTaGTGGCGAGGATCACCAGCT +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRRHHWL*WRGSPA
Trigger: AGCTGGTGATCCTCGCCACCACAACCAGTGATGCCG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTGCGCAGGCCTCCGCTaGCGAGCACTTTGTATCGAG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLCAGLR*RALCIE
Trigger: CTCGATACAAAGTGCTCGCCAGCGGAGGCCTGCGCA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCATGCGCAGGCCTCCGCTaGCGAGCACTTTGTATCGAG +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSCAGLR*RALCIE
Trigger: CTCGATACAAAGTGCTCGCCAGCGGAGGCCTGCGCA...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGATTCCGGAGTCCTCTaGACGCAGCTTCTGGATGCG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRDSGVL*TQLLDA
Trigger: CGCATCCAGAAGCTGCGTCCAGAGGACTCCGGAATC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACAACTGTGGTGTCCACTaGCCGCTGGGTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHNCGVH*PLGEHW
Trigger: CCAGTGTTCACCCAGCGGCCAGTGGACACCACAGTT...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCTCGCCTGACCACGTCTaGCTGATGAGAAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCSPDHV*LMRRDP
Trigger: CGGGTCCCTTCTCATCAGCCAGACGTGGTCAGGCGA...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGAGAGCACCACGGCGTaGCTGTGGGAAGAATTAGGG +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTESTTA*LWEELG
Trigger: CCCTAATTCTTCCCACAGCCACGCCGTGGTGCTCTC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGCAGATGCACCTTCCATaGAGAGTTGTTTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGQMHLP*RVVFRE
Trigger: CTCTCTGAAAACAACTCTCCATGGAAGGTGCATCTG...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGTGATGTTCCGCTGCTaGTACTCTCCGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRVMFRC*YSPGRP
Trigger: TGGCCTTCCCGGAGAGTACCAGCAGCGGAACATCAC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCCACAGGAACTGAATaGTGGTGGAGTTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCSTGTE*WWSSRL
Trigger: AAGCCGTGAACTCCACCACCATTCAGTTCCTGTGGA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTAGAGATGAGAGGCCTTaGATCTTGTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCRDERP*ILYSCV
Trigger: GACGCACGAGTACAAGATCCAAGGCCTCTCATCTCT...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGCTCCAGAAGAAATGGTaGATGAAGTCACCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVLQKKW*MKSPGQ
Trigger: CTGGCCTGGTGACTTCATCCACCATTTCTTCTGGAG...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGCCACTGCTGAGGACTaGAGGTCTGAGCGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCATAED*RSERQY
Trigger: GTACTGGCGCTCAGACCTCCAGTCCTCAGCAGTGGC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGAACACGAGCCTCACTaGTGGGCCTGGGGCATCGTC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPEHEPH*WAWGIV
Trigger: GACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCCCCAATGTCGTTGGTaGCTTTCAGGCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEPQCRW*LSGAAC
Trigger: ACAAGCTGCGCCTGAAAGCCACCAACGACATTGGGG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGAACATCCTGCAGCGTaGTCACCGCCTCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPREHPAA*SPPLSL
Trigger: CAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTCCCGGGGGCTCTCCTaGAACATCCTGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPSRGLS*NILQRG
Trigger: ACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCAGCAGCAGCGCCAGTaGTGGAGAAGCGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVQQQRQ*WRSGGC
Trigger: GCAGCCACCGCTTCTCCACCACTGGCGCTGCTGCTG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCTGAGGGGTGGACCATaGCAGCCCAGTCGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLLRGGP*QPSRLL
Trigger: CAACAGACGACTGGGCTGCCATGGTCCACCCCTCAG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCTGAGGGGTGGACCATaGCAGCCCAGTCGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCLRGGP*QPSRLL
Trigger: CAACAGACGACTGGGCTGCCATGGTCCACCCCTCAG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCCAGTGCTCACATCCTaGCTTCCCGCCCACTTCGCC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPPVLTS*LPAHFA
Trigger: GGCGAAGTGGGCGGGAAGCCAGGATGTGAGCACTGG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCTGGGCTCACCTGCCTaGAATCTCTGCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPLGSPA*NLCPGT
Trigger: GGTGCCAGGGCAGAGATTCCAGGCAGGTGAGCCCAG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 72 bp GACCCACGGGGAGCCACACTTAGGTACGCAGACGGGTaGCTCGTCAGGAGGATAGCTACACTGTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: DPRGATLRYADG*LVRRIATLCAK
Trigger: CTTGGCACACAGTGTAGCTATCCTCCTGACGAGCAACCCGTCTGCGTACCTAAGTGTGGCTCCCCGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTCTGGGGTAGCTGGTaGTGGGCAGCAGGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTVWGSW*WAAGLE
Trigger: TTCTAAACCTGCTGCCCATCACCAGCTACCCCAGAC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGGGACCCCCATGGCTTaGCATCCGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCGTPMA*HPMSTV
Trigger: AACTGTGGACATCGGATGTCAAGCCATGGGGGTCCC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTGCCGGCATCCTGGATaGAGACGGGCGCGATCTGTA +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPCRHPG*RRARSV
Trigger: TACAGATCGCGCCCGTCTTCATCCAGGATGCCGGCA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCTCGCACCTGCATGGTaGAGTACCGGATGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVLAPAW*STGWGR
Trigger: CCTCCCCCATCCGGTACTTCACCATGCAGGTGCGAG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCACACCGCCTCTGTCTCTaGACTGAAGTCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSHRLCL*TEVTVP
Trigger: GGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTG...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGGCGGCGTTGAAGGCTaGTATGCTGACCAGGTACTT +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRGGVEG*YADQVL
Trigger: AAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTAGGTCACTCCCTTGGTaGGGTCCCGCACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVRSLPW*GPAPSA
Trigger: GGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCT...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCACACCACCAGCAGGATaGCGATCAGGCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCTPPAG*RSGWTE
Trigger: CTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCTGCCGACTTCTCCTTaGGGCTCACGCTCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPLPTSP*GSRSRS
Trigger: TGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGCGTTGAGAAGGGTGTaGGCCGCTGGTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCALRRV*AAGSLE
Trigger: TTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGACAGGCAGAAAAGCCTaGGGACCGCACCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLTGRKA*GPHHCS
Trigger: ACTGCAGTGGTGCGGTCCTCAGGCTTTTCTGCCTGT...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGGGGGCCGAAGCAATCTaGAATGAGCCACGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTGAEAI*NEPRWG
Trigger: CCCCCAACGTGGCTCATTTCAGATTGCTTCGGCCCC...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCCACCACACTTCTGTTaGCCGGGGGAACCACAATGG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCPPHFC*PGEPQW
Trigger: CCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGTTTCTGGGGGTGGCTaGCACTGGACCATAATGGAC +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHVSGGG*HWTIMD
Trigger: GTCCATTATGGTCCAGTGGCAGCCACCCCCAGAAAC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCGCAACACCCCGTTGTaGTCTGTTTCTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPRNTPL*SVSGGG
Trigger: GCCACCCCCAGAAACAGAGCACAACGGGGTGTTGCG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCTGGTGATGTTCCGCTaGTGGTACTCTCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLLVMFR*WYSPGR
Trigger: CCTTCCCGGAGAGTACCAGCAGCGGAACATCACCAG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGACTGGTGATGTTCCGCTaGTGGTACTCTCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGLVMFR*WYSPGR
Trigger: CCTTCCCGGAGAGTACCAGCAGCGGAACATCACCAG...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGGCATCTGCCGGCCATaGCAGAAGCTTGTATCCCTG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLGICRP*QKLVSL
Trigger: CAGGGATACAAGCTTCTGGCATGGCCGGCAGATGCC...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGACGGCGTTGAAGGCCTaGATCTGCAGCTCGTATTCC +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRTALKA*ICSSYS
Trigger: GGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGT...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCGTAGAGCACGAACTTaGGCAGGCCTGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVRRART*AGLPAG
Trigger: CCCTGCTGGCAGGCCTGCGCAAGTTCGTGCTCTACG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGGCTCCTCCGGAGGTTaGCACACTATCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVGSSGG*HTIRTE
Trigger: CTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCC...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACCTTCAGCCAGCGCTaGCAGTTCCCTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGTFSQR*QFPLTS
Trigger: GGAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGT...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCTGTCCCTCAGTCCACTaGAGCGTCAGTTCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCCPSVH*SVSSEA
Trigger: CGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACA...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGAGGCGCGGCGCTTTaGTCACACGAAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPGGAAL*SHEGGE
Trigger: TTCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTTCTCAAATGCCGCATTaGTCTGGGAGGCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAASQMPH*SGRPKS
Trigger: AGATTTTGGCCTCCCAGAGCAATGCGGCATTTGAGA...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCATCACTGGTTGTGGTaGCGAGGATCACCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARHHWLW*RGSPAD
Trigger: ATCAGCTGGTGATCCTCGCCACCACAACCAGTGATG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGGGAACCACAATGGTTaGGGCCATGGTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARGNHNG*GHGFRC
Trigger: ACACCTGAAACCATGGCCCCAACCATTGTGGTTCCC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGAAAGGCCGTCGCCCTaGCCGGTTCAAAAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVERPSP*PVQKRS
Trigger: GGAGCGCTTTTGAACCGGCCAGGGCGACGGCCTTTC...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTTTGTATCGAGGATTCTaGAGCCTGCTGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAALYRGF*SLLMEM
Trigger: CATCTCCATCAGCAGGCTCCAGAATCCTCGATACAA...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGATTCCGGAGTCCTCTaGACGCAGCTTCTGGATGCG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLDSGVL*TQLLDA
Trigger: CGCATCCAGAAGCTGCGTCCAGAGGACTCCGGAATC...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAAACTGTGGTGTCCACTaGCCGCTGGGTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGNCGVH*PLGEHW
Trigger: CCAGTGTTCACCCAGCGGCCAGTGGACACCACAGTT...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCATGGTCCTCAGGAGGGTaGACGATGGACGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSWSSGG*TMDVRF
Trigger: GAATCGGACGTCCATCGTCCACCCTCCTGAGGACCA...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGACAGGAACTGAATGGTaGTGGAGTTCACGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVETGTEW*WSSRLP
Trigger: CGGAAGCCGTGAACTCCACCACCATTCAGTTCCTGT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGCGGTCACTGACGACTTaGGCCACTGCTGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTRSLTT*ATAEDW
Trigger: CCAGTCCTCAGCAGTGGCCCAAGTCGTCAGTGACCG...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGAGTATGAGCCCATTCTaGTCCTGTTCCGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVESMSPF*SCSGTD
Trigger: ATCCGTGCCGGAACAGGACCAGAATGGGCTCATACT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCGTTCTGCGGGGCCATaGCCGGGGCAGCCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGRSAGP*PGQPRR
Trigger: TCGGCGAGGCTGCCCCGGCCATGGCCCCGCAGAACG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGGTACTTGGTATGGCTaGTCAGGTTCTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCGTWYG*SGSSAS
Trigger: TGAGGCTGAAGAACCTGACCAGCCATACCAAGTACC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTCCGTGGAGGGGTTGCTaGGCTCCCCGTAGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLPWRGC*APRSPP
Trigger: AGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGG...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCTCACGAAGGAGTGCTTaGGCAGCGCGTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCSRRSA*AARPRS
Trigger: ACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGA...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGTTAAGGCTAAAAGCTaGCCTCGGACTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHVKAKS*PRTGRG
Trigger: CCCTCTCCCAGTCCGAGGCCAGCTTTTAGCCTTAAC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGATTCTCATGCAGAAGTaGCTTTGGGCAGAGCATCTA +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQILMQK*LWAEHL
Trigger: TAGATGCTCTGCCCAAAGCCACTTCTGCATGAGAAT...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGATTCACCCAGAAGGTaGCCGTGCAGGAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVDSPRR*PCRRPR
Trigger: CCTCGGCCTCCTGCACGGCCACCTTCTGGGTGAATC...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCTTCGGCAAGGCAGGTaGGAACAAGGCGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPLRQGR*EQGGSL
Trigger: AAGGGAACCGCCTTGTTCTCACCTGCCTTGCCGAAG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTTTCTTCTACTTCAGCTaGAATCCGACTCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARFFYFS*NPTLGL
Trigger: GAGCCCGAGAGTCGGATTTCAGCTGAAGTAGAAGAA...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTCCGATTCCACACAGTaGGCGTGGCCGATGCATTCA +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLSDSTQ*AWPMHS
Trigger: TGAATGCATCGGCCACGCTCACTGTGTGGAATCGGA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCTCAGGGCCAACGTTTaGCAGATGCACCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCLRANV*QMHLPW
Trigger: CCATGGAAGGTGCATCTGTCAAACGTTGGCCCTGAG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCATACTGTGTCCAGATaGTCAGGTCTGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHHTVSR*SGLSPG
Trigger: GCCTGGTGACAGACCTGATCATCTGGACACAGTATG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGGGTTCCACAGGAACTaGATGGTGGTGGAGTTCACG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCGFHRN*MVVEFT
Trigger: CGTGAACTCCACCACCATTCAGTTCCTGTGGAACCC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCGCTGACAGCCTCGGCTaGCACGTTCTCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSADSLG*HVLRGG
Trigger: GCCGCCCCTGAGAACGTGTCAGCCGAGGCTGTCAGC...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTCTTGGCGGACAGCCTaGAGATGTATGCGGACTCCG +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPSWRTA*RCMRTP
Trigger: CGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGCTGTCGCCTCATGGCTaGTGGACGAGGAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTLSPHG*WTRSRS
Trigger: AGACCTACTCCTCGTCCATCAGCCATGAGGCGACAG...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCGTGGCCTCAGATTCTaGTGCATCTGCCGACTTCTC +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCRGLRF*CICRLL
Trigger: GAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCTTCCTAGTTGGTCTTaGAGACGGAGAAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRLPSWS*RRRNPG
Trigger: CCCTGGGTTTCTCCGTCTTCAAGACCAACTAGGAAG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGGCGTTGAGAAGGGTGTaGGCCGCTGGTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTALRRV*AAGSLE
Trigger: TTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGC...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCTAGACACTGCCAAGTaGGAACATTTCAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQLDTAK*EHFRNR
Trigger: TCTGTTTCTGAAATGTTCTCACTTGGCAGTGTCTAG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTACCCGGGACCCGGGCTaGGGGGTGGACCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPTRDPG*GVDHGS
Trigger: GCTGCCATGGTCCACCCCTCAGCCCGGGTCCCGGGT...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACGAAACAGAAGTGTCATaGTGTTGTATCGAAAACCCG +
Preference number: 4 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDETEVS*CCIENP
Trigger: CGGGTTTTCGATACAACATCATGACACTTCTGTTTC...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGGGGCCGAAGCAATCTaGAATGAGCCACGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVGAEAI*NEPRWG
Trigger: CCCCCAACGTGGCTCATTTCAGATTGCTTCGGCCCC...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCAGGTAGCATCAACCTaGTTGTCTCGGCGCTGTACT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTQVAST*LSRRCT
Trigger: AGTACAGCGCCGAGACAAGCAGGTTGATGCTACCTG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCTTCTCCAGGGGCTCCTaGCAGCTGACCTTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCFSRGS*QLTLRD
Trigger: ATCTCTCAAGGTCAGCTGGCAGGAGCCCCTGGAGAA...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAGTGCTGTTCAGGGTGTaGGTGAGACGAGAGTCGTTC +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGVLFRV*VRRESF
Trigger: GAACGACTCTCGTCTCACGCACACCCTGAACAGCAC...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTACGTCGGGTGGGGCCTaGAGGGTCTGGATGACCCGG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCTSGGA*RVWMTR
Trigger: CCGGGTCATCCAGACCCTGCAGGCCCCACCCGACGT...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGCCAGCAGGGCCGACTaGGTGTGGTTCCCTCGCACG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCASRAD*VWFPRT
Trigger: CGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGGAACTTGCGCAGGCCTaGCAGCAGGGCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLELAQA*QQGRLR
Trigger: ACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTC...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGTCTCCTGGAACATCCTaGAGCGTGGTCACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTSPGTS*SVVTAS
Trigger: AGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGA...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTTTCGTTCTGGCTGTCTaGCTCCCAGTAGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAFVLAV*LPVVNL
Trigger: AAGATTTACTACTGGGAGGCAGACAGCCAGAACGAA...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTACCGCCTCGTACCTGTaGGGCGCAGGTGCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPTASYL*GAGARP
Trigger: GGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGT...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTATGACCGGGTGCAGCTaGGCGCCCGCCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPMTGCS*APASEP
Trigger: GGGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCAT...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGAAAAAGAAACAAACCTaGTTCCTGCAGCGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGKKKQT*FLQRSY
Trigger: GTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTT...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGGAGTTGACCGTGTaGTGTGTTCGGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPAELTV*CVRGRR
Trigger: TCTCCTTCCCCGAACACAGCACACGGTCAACTCCGC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTGGAGAAGCGGTGGCTaGTGCGAGCAGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVWRSGG*CEQPAE
Trigger: TTCTGCTGGCTGCTCGCAGCAGCCACCGCTTCTCCA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCAGCCCAGTCGTCTGTTaGAAAGATGACGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCSPVVC*KDDVRG
Trigger: GCCCCTCACGTCATCTTTGCAACAGACGACTGGGCT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGCACTGGTCAGATACTaGTCAGTTGTCCCCTACCCT +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHALVRY*SVVPYP
Trigger: AGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGGGGCGCACCTACCTTaGGCCAGCGCCCGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGGAHLP*ASARSK
Trigger: CTTGCTCCGGGCGCTGGCGCAAGGTAGGTGCGCCCC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGGGAACCACAATGGTTaGGGCCATGGTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHGNHNG*GHGFRC
Trigger: ACACCTGAAACCATGGCCCCAACCATTGTGGTTCCC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCCGGGGGAACCACAATaGTTGGGGCCATGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPPGEPQ*LGPWFQ
Trigger: CTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCTCCGGACAGAGCCACTaGCCAGAATGTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTSGQSH*PECGFL
Trigger: GAGAAAACCACATTCTGGCCAGTGGCTCTGTCCGGA...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGGAGCCCTCTGTGTTaGCCGCATAGCAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPGSPLC*PHSRCS
Trigger: ACTACACCTGCTATGCGGCCAACACAGAGGGCTCCC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCCAGCCGGGCCATCCTaGAGTCATTCCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVPAGPS*SHSLLQ
Trigger: CTGAAGGAGGGAATGACTCCAGGATGGCCCGGCTGG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGGAACTGAATGGTGGTaGAGTTCACGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHGTEWW*SSRLPS
Trigger: AGACGGAAGCCGTGAACTCCACCACCATTCAGTTCC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGACAGGAACTGAATGGTaGTGGAGTTCACGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRTGTEW*WSSRLP
Trigger: CGGAAGCCGTGAACTCCACCACCATTCAGTTCCTGT...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCCATGGTGGACTCCGTaGAAATCTGGGGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTPWWTP*KSGAIV
Trigger: CACTATTGCCCCAGATTTCCACGGAGTCCACCATGG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTTTCCCGTCATAGCCTaGCCGGAACTGAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPFPVIA*PELKGG
Trigger: GCCACCCTTCAGTTCCGGCCAGGCTATGACGGGAAA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGCCTCAACAATCCACCTaGAGATGGACGTTTTCCCGT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEPQQST*RWTFSR
Trigger: ACGGGAAAACGTCCATCTCCAGGTGGATTGTTGAGG...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCCTCAACAATCCACCTaGAGATGGACGTTTTCCCGT +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARPQQST*RWTFSR
Trigger: ACGGGAAAACGTCCATCTCCAGGTGGATTGTTGAGG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGGGATCTCCAGCATCTaGGCATCAGGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCGISSI*ASGSFS
Trigger: GGAGAATGAGCCTGATGCCCAGATGCTGGAGATCCC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGACCGTGACGCTGGTTaGAGCCACGTCGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCDRDAG*SHVGWG
Trigger: GCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCAGTATGAGCCCATTCTaGTCCTGTTCCGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTSMSPF*SCSGTD
Trigger: ATCCGTGCCGGAACAGGACCAGAATGGGCTCATACT...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCACGAGCCTCACTGGTaGGCCTGGGGCATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVHEPHW*AWGIVF
Trigger: AAAGACGATGCCCCAGGCCCACCAGTGAGGCTCGTG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGCTCTCCGGGGGTGGTaGGTCCCACGTGACCTCCAG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCALRGW*VPRDLQ
Trigger: CTGGAGGTCACGTGGGACCCACCACCCCCGGAGAGC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTCCTGCAGGATGCCGTTaGCCGCCGCAGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILAPAGCR*PPQARP
Trigger: GGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGG...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTGGGGCTAGGCCGGGGTaGGGACCTGGTCCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLGARPG*GPGPVL
Trigger: AAGAACGGGACCAGGTCCCCACCCCGGCCTAGCCCC...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGTTAAGGCTAAAAGCTaGCCTCGGACTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSVKAKS*PRTGRG
Trigger: CCCTCTCCCAGTCCGAGGCCAGCTTTTAGCCTTAAC...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGAGACTGGCTCCTGGGTaGCACTGGTCAGATACTGCT +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLRLAPG*HWSDTA
Trigger: AGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCT...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGAATGCCGCATTGCTCTaGGAGGCCAAAATCTACCTG +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVENAALL*EAKIYL
Trigger: CAGGTAGATTTTGGCCTCCCAGAGCAATGCGGCATT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCACATCCTTGCAGGGTaGGGCCGAAGCAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHHILAG*GRSNLK
Trigger: TTTCAGATTGCTTCGGCCCCACCCTGCAAGGATGTG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCGGTCACTGCCCTGCTaGAGACGCCCAGACCGGCCC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPRSLPC*RRPDRP
Trigger: GGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGACCG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGTGTCCAAGATCTCTGTaGAACTCAGATGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVECPRSL*NSDVPQ
Trigger: CTGTGGGACATCTGAGTTTCACAGAGATCTTGGACA...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGTAGGTGGTGAGAGATaGGAGGCCTTGGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRVGGER*EALDLV
Trigger: TACAAGATCCAAGGCCTCTCATCTCTCACCACCTAC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACTCTTGTAGCCCAGTATaGGCCCATTCTGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHSCSPV*AHSGPV
Trigger: AACAGGACCAGAATGGGCTCATACTGGGCTACAAGA...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGCTCGCACCTGCATGGTaGAGTACCGGATGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLLAPAW*STGWGR
Trigger: CCTCCCCCATCCGGTACTTCACCATGCAGGTGCGAG...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCCTCTGTCTCTGAACTaGAGTCACTGTCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTPLSLN*SHCPQC
Trigger: ACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGGTGTGTGGCGTCGCTaGGACAGATCCCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGGVWRR*DRSRGL
Trigger: GAGCCCCCGGGATCTGTCTCAGCGACGCCACACACC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGAAGCCATTGCACCAGTaGAATACACCTTCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQKPLHQ*NTPSLK
Trigger: TTTAAGAGAAGGTGTATTTCACTGGTGCAATGGCTT...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCCAGCATCGAGCTTCTaGAAAGATGGAATAATGTAC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCPASSF*KDGIMY
Trigger: GTACATTATTCCATCTTTGCAGAAGCTCGATGCTGG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCCAGCATCGAGCTTCTaGAAAGATGGAATAATGTAC +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAPASSF*KDGIMY
Trigger: GTACATTATTCCATCTTTGCAGAAGCTCGATGCTGG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTAGACCAGCTGAGGTGTaGTGGGAGGCCCGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLRPAEV*WEARPQ
Trigger: CTGGGGACGGGCCTCCCAGCACACCTCAGCTGGTCT...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGACGAGAGTCGTTCCTaGCGTACACTTCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLDESRS*RTLPKR
Trigger: TCTCTTGGGAAGTGTACGGCAGGAACGACTCTCGTC...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGCCAGCAGGGCCGACTaGGTGTGGTTCCCTCGCACG +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGASRAD*VWFPRT
Trigger: CGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGACTGGAGCCGGAGGCTaGGTGCGGTCACTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLTGAGG*VRSLLP
Trigger: AGGCAGAAGTGACCGCACGCAGCCTCCGGCTCCAGT...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGATAGCCCTGCAGGATaGCGTTGGCCGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCDSPAG*RWPPQA
Trigger: AGCCTGCGGCGGCCAACGGCATCCTGCAGGGCTATC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACTTATACTTCTTATTCTaGCCGTGCAGGACGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHLYFLF*PCRTRA
Trigger: CGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAA...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGTTATACTTCTTATTCTaGCCGTGCAGGACGAGGGCG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRLYFLF*PCRTRA
Trigger: CGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAA...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCGCCGTTGTACTTGTTaGAGATGTCCTCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTRRCTC*RCPRLS
Trigger: ACTCAGACGAGGACATCTGCAACAAGTACAACGGCG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCGCCGTTGTACTTGTTaGAGATGTCCTCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRRRCTC*RCPRLS
Trigger: ACTCAGACGAGGACATCTGCAACAAGTACAACGGCG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTACGCCGCCCGCGCTCTaGGTGGTGATGACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPTPPAL*VVMTGC
Trigger: GCACCCGGTCATCACCACGCAGAGCGCGGGCGGCGT...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGAGCCCAGTCGTCTGTTaGAAAGATGACGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTSPVVC*KDDVRG
Trigger: GCCCCTCACGTCATCTTTGCAACAGACGACTGGGCT...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTGGGGGAACGGCACCTaGCCGTTTGCCGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCWGNGT*PFAVHW
Trigger: CCAGTGCACGGCAAACGGGCAGGTGCCGTTCCCCCA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAGCACTGGTCAGATACTaGTCAGTTGTCCCCTACCCT +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGALVRY*SVVPYP
Trigger: AGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGC...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAGGGTTGCGATTCTCATaGAGAAGTGGCTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGGLRFS*RSGFGQ
Trigger: CTGCCCAAAGCCACTTCTGCATGAGAATCGCAACCC...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTTCTCAAATGCCGCATTaGTCTGGGAGGCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARSQMPH*SGRPKS
Trigger: AGATTTTGGCCTCCCAGAGCAATGCGGCATTTGAGA...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTATTAGGCAAACATCATaGTTCAGCCCAGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCIRQTS*FSPVTV
Trigger: AACTGTGACTGGGCTGAAGCATGATGTTTGCCTAAT...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGATTCCGGAGTCCTCTaGACGCAGCTTCTGGATGCG +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVDSGVL*TQLLDA
Trigger: CGCATCCAGAAGCTGCGTCCAGAGGACTCCGGAATC...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGATTGCTGGCGAAGCACTaGAAGATTCCGGAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGLLAKH*KIPESS
Trigger: AGAGGACTCCGGAATCTTCCAGTGCTTCGCCAGCAA...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCCGCTGGGTGAACACTaGAGCGATATTGGTTACATC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTPLGEH*SDIGYI
Trigger: GATGTAACCAATATCGCTCCAGTGTTCACCCAGCGG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGACTCTGTTTCTGGGGGTaGCTGCCACTGGACCATAAT +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGLCFWG*LPLDHN
Trigger: ATTATGGTCCAGTGGCAGCCACCCCCAGAAACAGAG...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGACTCCGTGGAAATCTaGGGCAATAGTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHDSVEI*GNSDHS
Trigger: ACTGTGGTCACTATTGCCCCAGATTTCCACGGAGTC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCCATGGTGGACTCCGTaGAAATCTGGGGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCPWWTP*KSGAIV
Trigger: CACTATTGCCCCAGATTTCCACGGAGTCCACCATGG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCAATCCACCTGGAGATaGACGTTTTCCCGTCATAGC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTQSTWR*TFSRHS
Trigger: GCTATGACGGGAAAACGTCCATCTCCAGGTGGATTG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTCAGGACAGAGGACGTaGTGTGTGGCGTCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVSGQRT*CVASLR
Trigger: TCTCAGCGACGCCACACACCACGTCCTCTGTCCTGA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCTGGCTCTCCGGGGGTaGTGGGTCCCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPLALRG*WVPRDL
Trigger: GAGGTCACGTGGGACCCACCACCCCCGGAGAGCCAG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCACCAGGTACTTGGTATaGCTGGTCAGGTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTTRYLV*LVRFFS
Trigger: GCTGAAGAACCTGACCAGCCATACCAAGTACCTGGT...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCCTGCAGGATGCCGTTaGCCGCCGCAGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRPAGCR*PPQARP
Trigger: GGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCCGTGGAGGGGTTGCTaGGCTCCCCGTAGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPPWRGC*APRSPP
Trigger: AGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCAGACTCCTCCATGGTaGAGATCCCCTTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPQTPPW*RSPFLC
Trigger: GCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGATCACAGACTCCTCCATaGTGGAGATCCCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGSQTPP*WRSPFL
Trigger: CAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGA...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCTCACAGACTCCTCCATaGTGGAGATCCCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCSQTPP*WRSPFL
Trigger: CAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGA...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGAGAGGGCCAGCGTGGTaGCTTCCAGCCCTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLRGPAW*LPALRG
Trigger: GCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCT...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCGTAACAAGCAATTCTaGAGACGCCGTCCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPRNKQF*RRRPVS
Trigger: GGACACGGGACGGCGTCTCCAGAATTGCTTGTTACG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTCAGCAGCGCCAGTGGTaGAGAAGCGGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLQQRQW*RSGGCC
Trigger: GCAGCAGCCACCGCTTCTCCACCACTGGCGCTGCTG...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGACCCGGGCTGAGGGGTaGACCATGGCAGCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGTRAEG*TMAAQS
Trigger: CGACTGGGCTGCCATGGTCCACCCCTCAGCCCGGGT...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCTACCCTCAGGTCACTaGGGGAACGGCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCLPSGH*GNGTCP
Trigger: CGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGATACAAAACTCTCCTTaGTCTCCTGGGGCCATACTC +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEIQNSP*SPGAIL
Trigger: GAGTATGGCCCCAGGAGACCAAGGAGAGTTTTGTAT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTCATCCGGGGAACTGTaGGTTGCGATTCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLSSGEL*VAILMQ
Trigger: CTGCATGAGAATCGCAACCCACAGTTCCCCGGATGA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGCTGGGGAGAGGGGCTTaGGCTGGACCGATTCACCCA +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLLGRGA*AGPIHP
Trigger: TGGGTGAATCGGTCCAGCCCAAGCCCCTCTCCCCAG...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCACCTCCCGGGGCTGTaGAGGCGCGTTCCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGHLPGL*RRVPCV
Trigger: CACACACGGAACGCGCCTCCACAGCCCCGGGAGGTG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 72 bp GTCCACTGTGGTGAGTCTCATCCGGGGAACTGTGGGTaGCGATTCTCATGCAGAAGTGGCTTTGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VHCGESHPGNCG*RFSCRSGFGQS
Trigger: GCTCTGCCCAAAGCCACTTCTGCATGAGAATCGCAACCCACAGTTCCCCGGATGAGACTCACCACAGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCCCATATATGCGACTTaGACTTCTGATTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCPIYAT*TSDFLC
Trigger: GCAAAGAAAATCAGAAGTTCAAGTCGCATATATGGG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGTCTGGGGTAGCTGGTaGTGGGCAGCAGGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVVWGSW*WAAGLE
Trigger: TTCTAAACCTGCTGCCCATCACCAGCTACCCCAGAC...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTTCTTCTACTTCAGCTaGAATCCGACTCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLFFYFS*NPTLGL
Trigger: GAGCCCGAGAGTCGGATTTCAGCTGAAGTAGAAGAA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGTGTCCAAGATCTCTGTaGAACTCAGATGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRCPRSL*NSDVPQ
Trigger: CTGTGGGACATCTGAGTTTCACAGAGATCTTGGACA...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGTAGGTGGTGAGAGATaGGAGGCCTTGGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCVGGER*EALDLV
Trigger: TACAAGATCCAAGGCCTCTCATCTCTCACCACCTAC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGCTGACAGCCTCGGCTaGCACGTTCTCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPADSLG*HVLRGG
Trigger: GCCGCCCCTGAGAACGTGTCAGCCGAGGCTGTCAGC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTGGTGCGCTCCAGGATaGGGGGCGTGCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRWCAPG*GACWGP
Trigger: GGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTCTGGTACCCCAGGATaGTGCCGTTGGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCSGTPG*CRWAPP
Trigger: CGGAGGAGCCCAACGGCATCATCCTGGGGTACCAGA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCCAGGTCGGTGGCTGTaGACTGCCTCACTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPPGRWL*TASLWR
Trigger: GCGCCACAGTGAGGCAGTTCACAGCCACCGACCTGG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCTCGCACCTGCATGGTaGAGTACCGGATGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCLAPAW*STGWGR
Trigger: CCTCCCCCATCCGGTACTTCACCATGCAGGTGCGAG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCACCTCTGTCTCTGAACTaGAGTCACTGTCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSPLSLN*SHCPQC
Trigger: ACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGG...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCAGGAGGAGAAGCCGGTaGGCGGAGTTCGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRRRRSR*AEFARR
Trigger: CCGGCGCGCGAACTCCGCTCACCGGCTTCTCCTCCT...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGATGGGACAAAACGCACTaGGCCCAGGGAAAAACGTTT +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGWDKTH*AQGKTF
Trigger: AAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCA...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGAGCTGCTTTGGGCTGTaGGCTCAGCATGTAAAGCTA +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLSCFGL*AQHVKL
Trigger: TAGCTTTACATGCTGAGCTCACAGCCCAAAGCAGCT...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGGTTGCAAAGATGACGTaGGGGGCTGGAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLVAKMT*GAGGMA
Trigger: GGCCATGCCTCCAGCCCCTCACGTCATCTTTGCAAC...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGAAACAGAAGTGTCATaGTGTTGTATCGAAAACCCG +
Preference number: 4 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCETEVS*CCIENP
Trigger: CGGGTTTTCGATACAACATCATGACACTTCTGTTTC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGGCTACAGCATTGAGTaGAGTGCGCCTTATAAAAGC +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHGYSIE*SAPYKS
Trigger: GCTTTTATAAGGCGCACTTCACTCAATGCTGTAGCC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGTGTGTGGCACCACAGTaGAGCGTGGCCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGCVAPQ*SVAVVP
Trigger: GGGGACCACGGCCACGCTGCACTGTGGTGCCACACA...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTTCTCCAGGGGCTCCTaGCAGCTGACCTTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVFSRGS*QLTLRD
Trigger: ATCTCTCAAGGTCAGCTGGCAGGAGCCCCTGGAGAA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTACGTCGGGTGGGGCCTaGAGGGTCTGGATGACCCGG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPTSGGA*RVWMTR
Trigger: CCGGGTCATCCAGACCCTGCAGGCCCCACCCGACGT...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCGTAGAGCACGAACTTaGGCAGGCCTGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCRRART*AGLPAG
Trigger: CCCTGCTGGCAGGCCTGCGCAAGTTCGTGCTCTACG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCGCGTGCGGTCACTTCTaGCTGGGGCACCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPACGHF*LGHQEL
Trigger: GAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGC...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGTTCGTTCTGGCTGTCTaGCTCCCAGTAGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEFVLAV*LPVVNL
Trigger: AAGATTTACTACTGGGAGGCAGACAGCCAGAACGAA...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTGGTGGGTGCGCCCCTaGTGGGGGTCACTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCWWVRP*WGSLLG
Trigger: ACCTAAGAGTGACCCCCAGCAGGGGCGCACCCACCA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTAAAAAGAAACAAACCTaGTTCCTGCAGCGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCKKKQT*FLQRSY
Trigger: GTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTT...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGAGGTGCCAAGCCATTaGACCAGTGAAATACACCTT +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPREVPSH*TSEIHL
Trigger: AAGGTGTATTTCACTGGTGCAATGGCTTGGCACCTC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCCCAGGCCCCGGAGGTaGCAAGCCATTGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPPRPRR*QAIAPV
Trigger: CACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGATTTGCAGACACTGTTaGTTTTCATCTTTCCCATGT +
Preference number: 4 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQICRHC*FSSFPC
Trigger: ACATGGGAAAGATGAAAAGCAACAGTGTCTGCAAAT...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGCTGTTGCTTCTCAAATaGCGCATTGCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTLLLLK*RIALGG
Trigger: GCCTCCCAGAGCAATGCGGCATTTGAGAAGCAACAG...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCATCACTGGTTGTGGTaGCGAGGATCACCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPHHWLW*RGSPAD
Trigger: ATCAGCTGGTGATCCTCGCCACCACAACCAGTGATG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCGTCTTCCAAAGCTGTaGAGGCCACTGGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPRLPKL*RPLVIL
Trigger: GAGAATCACCAGTGGCCTCCACAGCTTTGGAAGACG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCCACTGGCCAGAATGTaGTTTTCTCTTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRPLARM*FSLFQV
Trigger: CACCTGGAAAAGAGAAAACCACATTCTGGCCAGTGG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGTCCGGACAGAGCCACTaGCCAGAATGTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTSGQSH*PECGFL
Trigger: GAGAAAACCACATTCTGGCCAGTGGCTCTGTCCGGA...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCATCCACAGGAACTGAATaGTGGTGGAGTTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSSTGTE*WWSSRL
Trigger: AAGCCGTGAACTCCACCACCATTCAGTTCCTGTGGA...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAGTTATGTGTCCATGGTaGACTCCGTGGAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGVMCPW*TPWKSG
Trigger: CCCAGATTTCCACGGAGTCCACCATGGACACATAAC...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCTCCAGAAGAAATGGTaGATGAAGTCACCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLLQKKW*MKSPGQ
Trigger: CTGGCCTGGTGACTTCATCCACCATTTCTTCTGGAG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCATGTCAGTAAAATCTaGGTCGAGCTGACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLHVSKI*VELTAS
Trigger: CGAGGCTGTCAGCTCGACCCAGATTTTACTGACATG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGACATGTCAGTAAAATCTaGGTCGAGCTGACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGHVSKI*VELTAS
Trigger: CGAGGCTGTCAGCTCGACCCAGATTTTACTGACATG...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGAACACGAGCCTCACTaGTGGGCCTGGGGCATCGTC +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCEHEPH*WAWGIV
Trigger: GACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCCCCAATGTCGTTGGTaGCTTTCAGGCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVPQCRW*LSGAAC
Trigger: ACAAGCTGCGCCTGAAAGCCACCAACGACATTGGGG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTGTCCCCAATGTCGTTaGTGGCTTTCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVCPQCR*WLSGAA
Trigger: AGCTGCGCCTGAAAGCCACCAACGACATTGGGGACA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTCCCGGGGGCTCTCCTaGAACATCCTGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCSRGLS*NILQRG
Trigger: ACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTAGAGGGCCAGCGTGGTaGCTTCCAGCCCTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCRGPAW*LPALRG
Trigger: GCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCT...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCGTGGTGGAGAAGCGGTaGCTGCTGCGAGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPVVEKR*LLRAAS
Trigger: GCTGGCTGCTCGCAGCAGCCACCGCTTCTCCACCAC...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCACACCCTCTGCCCATaGAGGTGCACAAAACATCTA +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCHTLCP*RCTKHL
Trigger: TAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAAAGCAGCGCTGGCCATaGTCTCCATTTATCGCTTCT +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSKQRWP*SPFIAS
Trigger: AGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTT...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCGCACACCCATCCCTGTaGCTCAGACGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSAHPSL*LRRSLL
Trigger: CAGGAGGCTCCGTCTGAGCCACAGGGATGGGTGTGC...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCGAGGGGGTGTGGCCTaGCAGCTCTCTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGRGGVA*QLSLGS
Trigger: TGAGCCCAGAGAGAGCTGCCAGGCCACACCCCCTCG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCTGGGGAGAGGGGCTTaGGCTGGACCGATTCACCCA +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCLGRGA*AGPIHP
Trigger: TGGGTGAATCGGTCCAGCCCAAGCCCCTCTCCCCAG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTGATTCTGGAGCCTGCTaGTGGAGATGGCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVDSGAC*WRWHPC
Trigger: ACAAGGATGCCATCTCCATCAGCAGGCTCCAGAATC...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTGTCACCGATGTCGCCTaGCCACGTCTGGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLVTDVA*PRLADE
Trigger: CTCATCAGCCAGACGTGGTCAGGCGACATCGGTGAC...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCCTGCAGGGTCTGGATaGCCCGGGAAGACGGACTGT +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGPAGSG*PGKTDC
Trigger: ACAGTCCGTCTTCCCGGGTCATCCAGACCCTGCAGG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTCTTGTAGCCCAGTATaGGCCCATTCTGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPSCSPV*AHSGPV
Trigger: AACAGGACCAGAATGGGCTCATACTGGGCTACAAGA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTACTTCTTTAAATCTGTaGGCTCAGCATGTAAAGCTA +
Preference number: 4 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCTSLNL*AQHVKL
Trigger: TAGCTTTACATGCTGAGCTCACAGATTTAAAGAAGT...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389531.7
CDS-3UTR TCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGTGGTGGGTCCCACGTaGCCTCCAGCTGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNVVGPT*PPAGWP
Trigger: CGGCCAGCCAGCTGGAGGTCACGTGGGACCCACCAC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCAGGCATGGCCATCTCTaGGCTGTTAAGTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTRHGHL*AVKFSK
Trigger: TTTGGAAAACTTAACAGCTCAGAGATGGCCATGCCT...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCAAGACCTGTACAGAGTaGGCCACCTCCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSKTCTE*ATSRGC
Trigger: ACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTT...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCTTTTCTTTGCAGGAGTaGTCCCATTCTGTTTCGCAC +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTFSLQE*SHSVSH
Trigger: GTGCGAAACAGAATGGGAGCACTCCTGCAAAGAAAA...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTGGATCTTGTACTCGTaGGTCGTGCTGTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVWILYS*VVLFRV
Trigger: CACCCTGAACAGCACGACGCACGAGTACAAGATCCA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCACGTCGGGTGGGGCCTaGAGGGTCTGGATGACCCGG +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRTSGGA*RVWMTR
Trigger: CCGGGTCATCCAGACCCTGCAGGCCCCACCCGACGT...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGTCTCCTGGAACATCCTaGAGCGTGGTCACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLSPGTS*SVVTAS
Trigger: AGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGA...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTTGGTTCACGAAGGAGTaGTTGGGCAGCGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLWFTKE*LGSASS
Trigger: CGAGGACGCGCTGCCCAAGCACTCCTTCGTGAACCA...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCGCGGCCCTGGGCCCTaGGCTTCCATGAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGRGPGP*ASMSCS
Trigger: ACTACAACTCATGGAAGCGCAGGGCCCAGGGCCGCG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCCGGTTCCCTTCCAGGTaGATCTGTGGTAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSRFPSR*ICGRPG
Trigger: GCCAGGCCTACCACAGATCCACCTGGAAGGGAACCG...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCGTCTTCCAAAGCTGTaGAGGCCACTGGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVRLPKL*RPLVIL
Trigger: GAGAATCACCAGTGGCCTCCACAGCTTTGGAAGACG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCTCAGCAGTAAAATATaGTGGCTCTATGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAALSSKI*WLYDEK
Trigger: CTTTTCATCATAGAGCCACCATATTTTACTGCTGAG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCCGCTGGGTGAACACTaGAGCGATATTGGTTACATC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPPLGEH*SDIGYI
Trigger: GATGTAACCAATATCGCTCCAGTGTTCACCCAGCGG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCCCAGCCGGGCCATCCTaGAGTCATTCCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSPAGPS*SHSLLQ
Trigger: CTGAAGGAGGGAATGACTCCAGGATGGCCCGGCTGG...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCTCTGTTTCTGGGGGTaGCTGCCACTGGACCATAAT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVLCFWG*LPLDHN
Trigger: ATTATGGTCCAGTGGCAGCCACCCCCAGAAACAGAG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGACTCCGTGGAAATCTaGGGCAATAGTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPDSVEI*GNSDHS
Trigger: ACTGTGGTCACTATTGCCCCAGATTTCCACGGAGTC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTATGTCCCACAGCTCCTaGTTTGTCTTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPMSHSS*FVFLSP
Trigger: TGGACTCAGGAAGACAAACCAGGAGCTGTGGGACAT...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGAGAGATGAGAGGCCTTaGATCTTGTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTRDERP*ILYSCV
Trigger: GACGCACGAGTACAAGATCCAAGGCCTCTCATCTCT...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTAGAGATGAGAGGCCTTaGATCTTGTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPRDERP*ILYSCV
Trigger: GACGCACGAGTACAAGATCCAAGGCCTCTCATCTCT...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGCTCTCCGGGGGTGGTaGGTCCCACGTGACCTCCAG +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRALRGW*VPRDLQ
Trigger: CTGGAGGTCACGTGGGACCCACCACCCCCGGAGAGC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCTGGGTGCGCCCCTGCTaGGGGTCACTCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPWVRPC*GSLLGP
Trigger: TGGACCTAAGAGTGACCCCCAGCAGGGGCGCACCCA...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCGGGGATCCCTCGGCTaGCCCGGCTGTGATATTGGC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPRGSLG*PGCDIG
Trigger: GCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGACATTCCATCTAGCCTaGCTTAGAGACATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VSRGVDRVLCSGKERASVTFHLA*LRDILF
Trigger: AAACAAAATGTCTCTAAGCCAGGCTAGATGGAATGT...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 72 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTaGCCTCCGTTCCGCCCTGAGGGAGGCGCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGK*PPFRPEGGAAL
Trigger: AAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCGCTGCTGTAGGTGGTaGGCTCACTGTCATCGCGCA +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPRCCRW*AHCHRA
Trigger: TGCGCGATGACAGTGAGCTCACCACCTACAGCAGCG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCTGCCGGCATCCTGGATaGAGACGGGCGCGATCTGTA +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPCRHPG*RRARSV
Trigger: TACAGATCGCGCCCGTCTTCATCCAGGATGCCGGCA...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCAGGAGGTTCTGAGGTaGATGAGGCAGTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVQEVLR*MRQFNH
Trigger: GTGATTGAACTGCCTCATTCACCTCAGAACCTCCTG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTTGGCAGTACGGACCGTaGCGCTGGTTGGAGCCACGT +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPWQYGP*RWLEPR
Trigger: ACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCA...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTTCTCCAGCCGGTCACTaGCGACTTGGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPSPAGH*RLGPLL
Trigger: CAGCAGTGGCCCAAGTCGTCAGTGACCGGCTGGAGA...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTCCAGCTCCTCGATGGTaGATTCTCTCTCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLPAPRW*ILSPAG
Trigger: ACCGGCTGGAGAGAGAATTCACCATCGAGGAGCTGG...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCCCAGCTCCTCGATGGTaGATTCTCTCTCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSPAPRW*ILSPAG
Trigger: ACCGGCTGGAGAGAGAATTCACCATCGAGGAGCTGG...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGCTCGGGCCCGTAGGTaGTGGTCCGCGCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNARARR*WSALGH
Trigger: GTGTCCAAGCGCGGACCATCACCTACGGGCCCGAGC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGAAGCCATTGCACCAGTaGAATACACCTTCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEKPLHQ*NTPSLK
Trigger: TTTAAGAGAAGGTGTATTTCACTGGTGCAATGGCTT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTGGGACAAAACGCACTaGGCCCAGGGAAAAACGTTT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVWDKTH*AQGKTF
Trigger: AAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCTCCCTCGCTGTCAGGTaGGAAGGAAGGGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSSLAVR*EGRGKD
Trigger: GTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGA...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCGGCATCCGCAAGGCATaGCTTTCAGCACGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPGIRKA*LSARQE
Trigger: CTCCTGCCGTGCTGAAAGTCATGCCTTGCGGATGCC...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTTTTCTTTGCAGGAGTaGTCCCATTCTGTTTCGCAC +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLFSLQE*SHSVSH
Trigger: GTGCGAAACAGAATGGGAGCACTCCTGCAAAGAAAA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGGCCTGCACGTAGTATaGCCCGGCATCACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCGLHVV*PGITGC
Trigger: ACAACCAGTGATGCCGGGGCATACTACGTGCAGGCC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTGGCCTGCACGTAGTATaGCCCGGCATCACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLGLHVV*PGITGC
Trigger: ACAACCAGTGATGCCGGGGCATACTACGTGCAGGCC...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGCCATGGTTTCAGGTGTaGCAACATCTCTTGCTATGC +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTPWFQV*QHLLLC
Trigger: GCATAGCAAGAGATGTTGGCACACCTGAAACCATGG...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTAGTGAGCGTGGCCGATaGATTCAGGGAGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLSERGR*IQGALC
Trigger: ACAGAGGGCTCCCTGAATGCATCGGCCACGCTCACT...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCGCTGTACTGGCCCCTaGCCACTTCATTCACCGCGC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPRCTGP*PLHSPR
Trigger: GCGCGGTGAATGAAGTGGGCAGGGGCCAGTACAGCG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGGCTCCTCCGGAGGTTaGCACACTATCCGCACGGAG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPGSSGG*HTIRTE
Trigger: CTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTTCGGTGGCTGTGAACTaGCTCACTGTGGCGCCGACC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPSVAVN*LTVAPT
Trigger: GGTCGGCGCCACAGTGAGGCAGTTCACAGCCACCGA...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCGCGTCTTGGCCTCAGTaGCTGACCCGGCTTCATACT +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSASWPQ*LTRLHT
Trigger: AGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGC...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGTCACCTGCACGTTCTaGGGGGCCATGGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNVTCTF*GAMAGA
Trigger: TGCCCCGGCCATGGCCCCGCAGAACGTGCAGGTGAC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCCACGGTCACCACCTTaGTCACCCCTTGTACAGGGG +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPPRSPP*SPLVQG
Trigger: CCCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTGG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTGTCCCTCAGTCCACTaGAGCGTCAGTTCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCCPSVH*SVSSEA
Trigger: CGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACTCCTTGACTAGACACTaGCAAGTGAGAACATTTCAG +
Preference number: 4 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHSLTRH*QVRTFQ
Trigger: CTGAAATGTTCTCACTTGGCAGTGTCTAGTCAAGGA...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGTGGAGAAGCGGTGGCTaGTGCGAGCAGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGWRSGG*CEQPAE
Trigger: TTCTGCTGGCTGCTCGCAGCAGCCACCGCTTCTCCA...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGCTCTGCCCATGGAGGTaGACAAAACATCTAGGTAAG +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTLCPWR*TKHLGK
Trigger: CTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAG...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGAGTTAGGAACTGTTaGTTCTCAAATGCCGCATTG +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSGVRNC*FSNAAL
Trigger: CAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCC...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTATGCCCCGGCATCACTaGTTGTGGTGGCGAGGATCA +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLMPRHH*LWWRGS
Trigger: TGATCCTCGCCACCACAACCAGTGATGCCGGGGCAT...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCATGCCCCGGCATCACTaGTTGTGGTGGCGAGGATCA +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSMPRHH*LWWRGS
Trigger: TGATCCTCGCCACCACAACCAGTGATGCCGGGGCAT...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGAAAGGCCGTCGCCCTaGCCGGTTCAAAAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPERPSP*PVQKRS
Trigger: GGAGCGCTTTTGAACCGGCCAGGGCGACGGCCTTTC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGTTGTATCGAGGATTCTaGAGCCTGCTGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTLYRGF*SLLMEM
Trigger: CATCTCCATCAGCAGGCTCCAGAATCCTCGATACAA...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCTGGACGCAGCTTCTaGATGCGCAGGCCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILASGRSF*MRRPPL
Trigger: CAGCGGAGGCCTGCGCATCCAGAAGCTGCGTCCAGA...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGTGTCCACTGGCCGCTaGGTGAACACTGGAGCGATA +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCVSTGR*VNTGAI
Trigger: TATCGCTCCAGTGTTCACCCAGCGGCCAGTGGACAC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCCCTAGACGTGCTCGATaGAGTCAGGGCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSPRRAR*SQGHVV
Trigger: GACAACGTGGCCCTGACTCCATCGAGCACGTCTAGG...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTGAGAGCACCACGGCGTaGCTGTGGGAAGAATTAGGG +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLESTTA*LWEELG
Trigger: CCCTAATTCTTCCCACAGCCACGCCGTGGTGCTCTC...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCACAGATGCACCTTCCATaGAGAGTTGTTTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSQMHLP*RVVFRE
Trigger: CTCTCTGAAAACAACTCTCCATGGAAGGTGCATCTG...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTCCACAGGAACTGAATaGTGGTGGAGTTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVSTGTE*WWSSRL
Trigger: AAGCCGTGAACTCCACCACCATTCAGTTCCTGTGGA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTTCGTTATGTGTCCATaGTGGACTCCGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLFVMCP*WTPWKS
Trigger: AGATTTCCACGGAGTCCACCATGGACACATAACGAA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTATGTCCCACAGCTCCTaGTTTGTCTTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVMSHSS*FVFLSP
Trigger: TGGACTCAGGAAGACAAACCAGGAGCTGTGGGACAT...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTTTCCCGTCATAGCCTaGCCGGAACTGAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCFPVIA*PELKGG
Trigger: GCCACCCTTCAGTTCCGGCCAGGCTATGACGGGAAA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACTGCCCGGGACCCACTaGAGCCGGAGGCTGCGTGCG +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRLPGTH*SRRLRA
Trigger: CGCACGCAGCCTCCGGCTCCAGTGGGTCCCGGGCAG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCTGCCCGGGACCCACTaGAGCCGGAGGCTGCGTGCG +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESLPGTH*SRRLRA
Trigger: CGCACGCAGCCTCCGGCTCCAGTGGGTCCCGGGCAG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCTCACGAAGGAGTGCTTaGGCAGCGCGTCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSSRRSA*AARPRS
Trigger: ACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGA...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTCCAGTGCTCACATCCTaGCTTCCCGCCCACTTCGCC +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILAPVLTS*LPAHFA
Trigger: GGCGAAGTGGGCGGGAAGCCAGGATGTGAGCACTGG...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCAGGCCAAAATCTACCTaGAAACATCCAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCRPKST*KHPALF
Trigger: GAACAGAGCTGGATGTTTCCAGGTAGATTTTGGCCT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCTCAGACGGAGCCTCCTaGCCACTCCGTGACCACATC +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPSDGAS*PLRDHI
Trigger: GATGTGGTCACGGAGTGGCCAGGAGGCTCCGTCTGA...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCGAGAGGGGCTTGGGCTaGACCGATTCACCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPERGLG*TDSPRR
Trigger: CCTTCTGGGTGAATCGGTCCAGCCCAAGCCCCTCTC...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 72 bp CCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTaGACTAGACACTGCCAAGTGAGAACATTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PCLAVRNLKADS*TRHCQVRTFQK
Trigger: TTTCTGAAATGTTCTCACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCGCTGCTGTAGGTGGTaGGCTCACTGTCATCGCGCA +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPRCCRW*AHCHRA
Trigger: TGCGCGATGACAGTGAGCTCACCACCTACAGCAGCG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTCTGGTCCGTATCCATaGAACTTCCCATATATGCGA +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPSGPYP*NFPYMR
Trigger: TCGCATATATGGGAAGTTTCATGGATACGGACCAGA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTGTCTGGGGTAGCTGGTaGTGGGCAGCAGGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLVWGSW*WAAGLE
Trigger: TTCTAAACCTGCTGCCCATCACCAGCTACCCCAGAC...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCCAAACGTAGCGGAGTaGAACCCGGGGGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPPNVAE*NPGVMC
Trigger: ACACATGACCCCCGGGTTTCACTCCGCTACGTTTGG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTTGGACCATAATGGACTaGTTAGTCCGCCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLWTIMD*LVRPLA
Trigger: GGCCAGTGGGCGGACTAATCAGTCCATTATGGTCCA...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCACCTCCGGGCTGGTaGTGTTCCGCTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILASPPGW*CSAAGT
Trigger: AGTACCAGCAGCGGAACATCACCAGCCCGGAGGTGA...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCCATTGATAAACTGCTaGGGCGGAGGGTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCPLINC*GGGFHR
Trigger: CCTGTGGAACCCTCCGCCTCAGCAGTTTATCAATGG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCTATCCGCACGGAGGTaGGTCTCACTTCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPLSARR*VSLRGT
Trigger: TGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCTGTCGCCTCATGGCTaGTGGACGAGGAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGLSPHG*WTRSRS
Trigger: AGACCTACTCCTCGTCCATCAGCCATGAGGCGACAG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCGGCGGCGTTGAAGGCTaGTATGCTGACCAGGTACTT +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSGGVEG*YADQVL
Trigger: AAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCC...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAAGGAGGAGAAGCCGGTaGGCGGAGTTCGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRRRRSR*AEFARR
Trigger: CCGGCGCGCGAACTCCGCTCACCGGCTTCTCCTCCT...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGCCTCCGTTCCGCCCTaGGGGAGGCGCGGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWASVPP*GRRGAL
Trigger: CAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGCTTCCTAGTTGGTCTTaGAGACGGAGAAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLLPSWS*RRRNPG
Trigger: CCCTGGGTTTCTCCGTCTTCAAGACCAACTAGGAAG...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGCATACTCAGCAACGCTaGCAGCACAGAATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLHTQQR*QHRIQA
Trigger: TGCCTGGATTCTGTGCTGTCAGCGTTGCTGAGTATG...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGGAGCAACATCATCTTaGGCCAGCGCCCGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPGATSS*ASARSK
Trigger: CTTGCTCCGGGCGCTGGCGCAAGATGATGTTGCTCC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389531.7
ENST00000404826.7
CDS-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGTTTTCTTTGCAGGAGTaGTCCCATTCTGTTTCGCAC +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTFSLQE*SHSVSH
Trigger: GTGCGAAACAGAATGGGAGCACTCCTGCAAAGAAAA...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCGTTTCTGGGGGTGGCTaGCACTGGACCATAATGGAC +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSVSGGG*HWTIMD
Trigger: GTCCATTATGGTCCAGTGGCAGCCACCCCCAGAAAC...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCTGGTGATGTTCCGCTaGTGGTACTCTCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPLVMFR*WYSPGR
Trigger: CCTTCCCGGAGAGTACCAGCAGCGGAACATCACCAG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTGGTGTACTCGGTCACTaGCCTGCTGAAGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILAGVLGH*PAEDAQ
Trigger: CTGGGCGTCTTCAGCAGGGCAGTGACCGAGTACACC...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCAGCCGTGGAGGGGTTaGTGGGCTCCCCGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESQPWRG*WAPRSP
Trigger: CGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTCCTTGACTAGACACTaGCAAGTGAGAACATTTCAG +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLSLTRH*QVRTFQ
Trigger: CTGAAATGTTCTCACTTGGCAGTGTCTAGTCAAGGA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGATTTGCAGACACTGTTaGTTTTCATCTTTCCCATGT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEICRHC*FSSFPC
Trigger: ACATGGGAAAGATGAAAAGCAACAGTGTCTGCAAAT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCAGAAGCGGTGGCTGCTaGGAGCAGCCAGCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRRSGGC*EQPAEA
Trigger: GGCTTCTGCTGGCTGCTCGCAGCAGCCACCGCTTCT...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGAGGGGCCACACTTTCTaGATGTGGCCAGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGRGHTF*MWPGDW
Trigger: CCAGTCTCCTGGCCACATGCAGAAAGTGTGGCCCCT...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCTCCGTTTTAAAATATaGAGCAACATCATCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRLRFKI*SNIILR
Trigger: GCGCAAGATGATGTTGCTCCATATTTTAAAACGGAG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389531.7
ENST00000404826.7
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGGCTATTCTGTTGCTTaGAATAATCTTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLGYSVA*NNLVPF
Trigger: GAAGGGCACAAGATTATTCCAAGCAACAGAATAGCC...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGCATCCTTGTACCACTaGAGGGTGGGAAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPASLYH*RVGRGT
Trigger: GGTCCCCCTTCCCACCCTCCAGTGGTACAAGGATGC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCAGGAGGGTGGACGATaGACGTCCGATTCCACACAG +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGQEGGR*TSDSTQ
Trigger: CTGTGTGGAATCGGACGTCCATCGTCCACCCTCCTG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCCAGCCGGGCCATCCTaGAGTCATTCCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPPAGPS*SHSLLQ
Trigger: CTGAAGGAGGGAATGACTCCAGGATGGCCCGGCTGG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGTCTCGGCGCTGTACTaGCCCCTGCCCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPVSALY*PLPTSF
Trigger: GAATGAAGTGGGCAGGGGCCAGTACAGCGCCGAGAC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCGGTCACTGACGACTTaGGCCACTGCTGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPRSLTT*ATAEDW
Trigger: CCAGTCCTCAGCAGTGGCCCAAGTCGTCAGTGACCG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTGTGGGGGCTGCTGCTaGCCAGGCGGTAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRCGGCC*PGGRQS
Trigger: AGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGGAGAAACCCAGGGCTaGGGAGGTCTGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRGETQG*GGLRSS
Trigger: GGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGACATTCCATCTAGCCTaGCTTAGAGACATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVETFHLA*LRDILF
Trigger: AAACAAAATGTCTCTAAGCCAGGCTAGATGGAATGT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCTTCGGCAAGGCAGGTaGGAACAAGGCGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPLRQGR*EQGGSL
Trigger: AAGGGAACCGCCTTGTTCTCACCTGCCTTGCCGAAG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCCCATATATGCGACTTaGACTTCTGATTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLPIYAT*TSDFLC
Trigger: GCAAAGAAAATCAGAAGTTCAAGTCGCATATATGGG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCTATGCTCAAATGAATaGATGGGCTTGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTLCSNE*MGLSCF
Trigger: AAAACAAGACAAGCCCATTCATTCATTTGAGCATAG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGGGTTCCACAGGAACTaGATGGTGGTGGAGTTCACG +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGGFHRN*MVVEFT
Trigger: CGTGAACTCCACCACCATTCAGTTCCTGTGGAACCC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATATGGTGCGCTCCAGGATaGGGGGCGTGCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIWCAPG*GACWGP
Trigger: GGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCA...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTTCTTGGCGGACAGCCTaGAGATGTATGCGGACTCCG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPSWRTA*RCMRTP
Trigger: CGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGA...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGCAGCTTGTAGGAGGTaGAGGGCCTCAGTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGAACRR*RASVCQ
Trigger: TTGACAGACTGAGGCCCTTCACCTCCTACAAGCTGC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCTTGGCCTCAGTGCCTaGCCCGGCTTCATACTCCAG +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRLGLSA*PGFILQ
Trigger: CTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTACACCACCAGCAGGATaGCGATCAGGCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPTPPAG*RSGWTE
Trigger: CTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGT...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGGCCCTGCGCTTCCATaGGTTGTAGTAGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRGPALP*VVVGGV
Trigger: GACCCCACCTACTACAACTCATGGAAGCGCAGGGCC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCATACTCAGCAACGCTaGCAGCACAGAATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCHTQQR*QHRIQA
Trigger: TGCCTGGATTCTGTGCTGTCAGCGTTGCTGAGTATG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGAACGTTTAGGGACCTaGCGGCTCCCTAAACCAGAA +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCERLGT*RLPKPE
Trigger: TTCTGGTTTAGGGAGCCGTCAGGTCCCTAAACGTTC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTCCACCACACTTCTGTTaGCCGGGGGAACCACAATGG +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILAPPHFC*PGEPQW
Trigger: CCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGG...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGCAACACCCCGTTGTaGTCTGTTTCTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRRNTPL*SVSGGG
Trigger: GCCACCCCCAGAAACAGAGCACAACGGGGTGTTGCG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACAGCCTCGGGGGCATCTaGCGGCCATGCCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNSLGGI*RPCQKL
Trigger: AAGCTTCTGGCATGGCCGGCAGATGCCCCCGAGGCT...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTGGATCTTGTACTCGTaGGTCGTGCTGTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCWILYS*VVLFRV
Trigger: CACCCTGAACAGCACGACGCACGAGTACAAGATCCA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTCTGTCAACGACGCATaGTGTCGCCTCATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCSVNDA*CRLMAD
Trigger: ATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGAGATCCCCTTTCCTGTaGTGCAGTTCTTATACTTCT +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTRSPFL*CSSYTS
Trigger: AGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCT...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGTGGTGATGACCGGGTaGAGCTGCGCGCCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWVVMTG*SCAPAS
Trigger: CGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCAC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGCCAGGGAAAAACGTTTaGTCTTCAAACCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CARGESGACVLRAVLLYLPGKNV*SSNPRS
Trigger: GCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGG...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGGGAGACTCAGCCACTaGTGTCATGAGGCATCCGCA +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPGRLSH*CHEASA
Trigger: TGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCCC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCTCCGTTTTAAAATATaGAGCAACATCATCTTGCGC +
Preference number: 4 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLLRFKI*SNIILR
Trigger: GCGCAAGATGATGTTGCTCCATATTTTAAAACGGAG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389531.7
ENST00000404826.7
CDS-3UTR CCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTGAAGGGGGACCCCCATaGCTTGACATCCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILAEGGPP*LDIRCP
Trigger: TGGACATCGGATGTCAAGCCATGGGGGTCCCCCTTC...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTACACTGGAGCGATATTaGTTACATCCAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVTLERY*LHPGRC
Trigger: ACACCTACCTGGATGTAACCAATATCGCTCCAGTGT...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTCCTAGACGTGCTCGATaGAGTCAGGGCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILAPRRAR*SQGHVV
Trigger: GACAACGTGGCCCTGACTCCATCGAGCACGTCTAGG...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTACCACGGCGTGGCTGTaGGAAGAATTAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPTTAWL*EELGLT
Trigger: GGTCAGCCCTAATTCTTCCCACAGCCACGCCGTGGT...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTCTCTGTTTCTGGGGGTaGCTGCCACTGGACCATAAT +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLLCFWG*LPLDHN
Trigger: ATTATGGTCCAGTGGCAGCCACCCCCAGAAACAGAG...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTTCGTTATGTGTCCATaGTGGACTCCGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVFVMCP*WTPWKS
Trigger: AGATTTCCACGGAGTCCACCATGGACACATAACGAA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGCACCAGGAGCTCTCTaGGGGGTGCCGGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWAPGAL*GVPAAL
Trigger: GAGAGCGGCCGGCACCCCCCAGAGAGCTCCTGGTGC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGAACATCCTGCAGCGTaGTCACCGCCTCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPEHPAA*SPPLSL
Trigger: CAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCCACACATCGTCGATGTaGAGCTGCTGTTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSHTSSM*SCCSPS
Trigger: AGACGGTGAACAGCAGCTCCACATCGACGATGTGTG...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAAGGGAGGGGACGGCCTaGTGTGCACGAGGCGAGTCG +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRREGTA*CARGES
Trigger: CGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCT...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTGGGCACACACGCCAGTaGGCACCAGCAGTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESGHTRQ*APAVLP
Trigger: CGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCC...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGCTCCTGGGTGGCACTaGTCAGATACTGCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGAPGWH*SDTAQL
Trigger: CAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCATGTGGCCAGGAGACTaGCTCCTGGGTGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRMWPGD*LLGGTG
Trigger: ACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACAT...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTGAGGCCGAGGGGGTGTaGCCTGGCAGCTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESEAEGV*PGSSLW
Trigger: CCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTC...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGATTCACCCAGAAGGTaGCCGTGCAGGAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNDSPRR*PCRRPR
Trigger: CCTCGGCCTCCTGCACGGCCACCTTCTGGGTGAATC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCCCATATATGCGACTTaGACTTCTGATTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPPIYAT*TSDFLC
Trigger: GCAAAGAAAATCAGAAGTTCAAGTCGCATATATGGG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCTTCTTCTACTTCAGCTaGAATCCGACTCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSFFYFS*NPTLGL
Trigger: GAGCCCGAGAGTCGGATTTCAGCTGAAGTAGAAGAA...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTTTTCTCTTTTCCAGGTaGTGGCGGGTTTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPFLFSR*WRVWEP
Trigger: GGGCTCCCAAACCCGCCATCACCTGGAAAAGAGAAA...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGTCACCGATGTCGCCTaGCCACGTCTGGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNVTDVA*PRLADE
Trigger: CTCATCAGCCAGACGTGGTCAGGCGACATCGGTGAC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCAGGAGGTTCTGAGGTaGATGAGGCAGTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCQEVLR*MRQFNH
Trigger: GTGATTGAACTGCCTCATTCACCTCAGAACCTCCTG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACTCACCTCCGGGCTGGTaGTGTTCCGCTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNSPPGW*CSAAGT
Trigger: AGTACCAGCAGCGGAACATCACCAGCCCGGAGGTGA...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCATACTGTGTCCAGATaGTCAGGTCTGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGHTVSR*SGLSPG
Trigger: GCCTGGTGACAGACCTGATCATCTGGACACAGTATG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCAGCCCCGACGGCGTTaGAGGCCTGCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESQPRRR*RPASAA
Trigger: AGCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCTG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGCAGATGTCCTCGTCTaGGTAGTGCAGGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRADVLV*VVQAAG
Trigger: CCCGGCGGCCTGCACTACTCAGACGAGGACATCTGC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCACAGGCAGAAAAGCCTaGGGACCGCACCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRTGRKA*GPHHCS
Trigger: ACTGCAGTGGTGCGGTCCTCAGGCTTTTCTGCCTGT...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTCCCTCGCTGTCAGGTaGGAAGGAAGGGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRSLAVR*EGRGKD
Trigger: GTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTAGCTGCTTTGGGCTGTaGGCTCAGCATGTAAAGCTA +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCSCFGL*AQHVKL
Trigger: TAGCTTTACATGCTGAGCTCACAGCCCAAAGCAGCT...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGCTTGGAATAATCTTGTaGCCTTCTCTAAACCAAGTC +
Preference number: 4 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTLGIIL*PSLNQV
Trigger: GACTTGGTTTAGAGAAGGGCACAAGATTATTCCAAG...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGACGAGAGTCGTTCCTaGCGTACACTTCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGDESRS*RTLPKR
Trigger: TCTCTTGGGAAGTGTACGGCAGGAACGACTCTCGTC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGCGTGCGGTCACTTCTaGCTGGGGCACCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRACGHF*LGHQEL
Trigger: GAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGTCTGTCAACGACGCATaGTGTCGCCTCATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGSVNDA*CRLMAD
Trigger: ATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGA...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGCGTCTTGGCCTCAGTaGCTGACCCGGCTTCATACT +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRASWPQ*LTRLHT
Trigger: AGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTCCCCTTTCCTGTGCTaGAGTTCTTATACTTCTTAT +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPSPFLC*SSYTSY
Trigger: ATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTCCAGGGAAAAACGTTTaGTCTTCAAACCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLPGKNV*SSNPRS
Trigger: GCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGG...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACAGTGGGCACCAGCAGTaGTCCCGTTCCATCCAGACC +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNSGHQQ*SRSIQT
Trigger: GGTCTGGATGGAACGGGAGCACTGCTGGTGCCCACT...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACGCCTCGCAGACGTATaGCCCGGTGTCCGCGGACGT +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIRLADV*PGVRGR
Trigger: ACGTCCGCGGACACCGGGCCATACGTCTGCGAGGCG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCGCCTCGCAGACGTATaGCCCGGTGTCCGCGGACGT +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWRLADV*PGVRGR
Trigger: ACGTCCGCGGACACCGGGCCATACGTCTGCGAGGCG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGAAGGGGGACCCCCATaGCTTGACATCCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRREGGPP*LDIRCP
Trigger: TGGACATCGGATGTCAAGCCATGGGGGTCCCCCTTC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCTTGCTGGCGAAGCACTaGAAGATTCCGGAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPLLAKH*KIPESS
Trigger: AGAGGACTCCGGAATCTTCCAGTGCTTCGCCAGCAA...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCCCCTCCTTCATTGCTaGCGAAGCACTGGAAGATTC +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGPLLHC*RSTGRF
Trigger: GAATCTTCCAGTGCTTCGCCAGCAATGAAGGAGGGG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGTGTCCACTGGCCGCTaGGTGAACACTGGAGCGATA +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRVSTGR*VNTGAI
Trigger: TATCGCTCCAGTGTTCACCCAGCGGCCAGTGGACAC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACTCGCCTGACCACGTCTaGCTGATGAGAAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNSPDHV*LMRRDP
Trigger: CGGGTCCCTTCTCATCAGCCAGACGTGGTCAGGCGA...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGTTGTGCTCTGTTTCTaGGGGTGGCTGCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRVVLCF*GWLPLD
Trigger: GTCCAGTGGCAGCCACCCCCAGAAACAGAGCACAAC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTCTGCGGGGGCGCGGTaGGCACTCCCTGCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWSAGAR*ALPARC
Trigger: ACACCTTGCAGGGAGTGCCCACCGCGCCCCCGCAGA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGTTATGTGTCCATGGTaGACTCCGTGGAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCVMCPW*TPWKSG
Trigger: CCCAGATTTCCACGGAGTCCACCATGGACACATAAC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGCACTCCAGAAGAAATaGTGGATGAAGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCALQKK*WMKSPG
Trigger: GCCTGGTGACTTCATCCACCATTTCTTCTGGAGTGC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTGGCACCAGGAAGGTCTaGGGGCACTCCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILAGTRKV*GHSRRN
Trigger: ATTTCTTCTGGAGTGCCCCCAGACCTTCCTGGTGCC...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGGGGCCTGCAGGGTCTaGATGACCCGGGAAGACGGA +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRGACRV*MTREDG
Trigger: TCCGTCTTCCCGGGTCATCCAGACCCTGCAGGCCCC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACCGGTCACTGACGACTTaGGCCACTGCTGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNRSLTT*ATAEDW
Trigger: CCAGTCCTCAGCAGTGGCCCAAGTCGTCAGTGACCG...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTAAGGGTGTGAGCCGCTaGTTCTCTGGAAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILAKGVSR*FSGRGG
Trigger: ACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTT...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCGTAACAAGCAATTCTaGAGACGCCGTCCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPRNKQF*RRRPVS
Trigger: GGACACGGGACGGCGTCTCCAGAATTGCTTGTTACG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGGGCACACACGCCAGTaGGCACCAGCAGTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWGHTRQ*APAVLP
Trigger: CGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTAAGCAGCGCTGGCCATaGTCTCCATTTATCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCKQRWP*SPFIAS
Trigger: AGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTT...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCACATCCTTGCAGGGTaGGGCCGAAGCAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGHILAG*GRSNLK
Trigger: TTTCAGATTGCTTCGGCCCCACCCTGCAAGGATGTG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGAGGGGGTGTGGCCTaGCAGCTCTCTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRRGGVA*QLSLGS
Trigger: TGAGCCCAGAGAGAGCTGCCAGGCCACACCCCCTCG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGATCAGGCCACTCACGGTaGCGCCTGTCATCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRSGHSR*RLSSQG
Trigger: GCCCTGAGATGACAGGCGTCACCGTGAGTGGCCTGA...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTTCAGGCCACTCACGGTaGCGCCTGTCATCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESSGHSR*RLSSQG
Trigger: GCCCTGAGATGACAGGCGTCACCGTGAGTGGCCTGA...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCATACTGTGTCCAGATaGTCAGGTCTGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPHTVSR*SGLSPG
Trigger: GCCTGGTGACAGACCTGATCATCTGGACACAGTATG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTGTCCAAGATCTCTGTaGAACTCAGATGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCCPRSL*NSDVPQ
Trigger: CTGTGGGACATCTGAGTTTCACAGAGATCTTGGACA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACTCTTGGCGGACAGCCTaGAGATGTATGCGGACTCCG +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNSWRTA*RCMRTP
Trigger: CGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGA...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGGCGGCGTTGAAGGCTaGTATGCTGACCAGGTACTT +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRGGVEG*YADQVL
Trigger: AAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTAGGTCACTCCCTTGGTaGGGTCCCGCACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESRSLPW*GPAPSA
Trigger: GGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCT...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACACAGGCAGAAAAGCCTaGGGACCGCACCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNTGRKA*GPHHCS
Trigger: ACTGCAGTGGTGCGGTCCTCAGGCTTTTCTGCCTGT...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCGGCTACAGCATTGAGTaGAGTGCGCCTTATAAAAGC +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSGYSIE*SAPYKS
Trigger: GCTTTTATAAGGCGCACTTCACTCAATGCTGTAGCC...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTGTGCCAACATCTCTTaGTATGCTCAAATGAATGAA +
Preference number: 4 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPCANIS*YAQMNE
Trigger: TTCATTCATTTGAGCATAGCAAGAGATGTTGGCACA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCCATGGTTTCAGGTGTaGCAACATCTCTTGCTATGC +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCPWFQV*QHLLLC
Trigger: GCATAGCAAGAGATGTTGGCACACCTGAAACCATGG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGTTTCTGGGGGTGGCTaGCACTGGACCATAATGGAC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRVSGGG*HWTIMD
Trigger: GTCCATTATGGTCCAGTGGCAGCCACCCCCAGAAAC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATATTCACGGCTTCCGTCTaGACGTTCTGCGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIFTASV*TFCGGA
Trigger: CGCGCCCCCGCAGAACGTGCAGACGGAAGCCGTGAA...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAAAGTCACCAGGCCAGTaGCCACGGCAGTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRKSPGQ*PRQSQR
Trigger: CCGCTGTGACTGCCGTGGGCACTGGCCTGGTGACTT...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAGCGTGCGGTCACTTCTaGCTGGGGCACCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIACGHF*LGHQEL
Trigger: GAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGC...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGTGAGTGGGGTCACCTaGACGTTCTGCGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRVSGVT*TFCGAM
Trigger: CATGGCCCCGCAGAACGTGCAGGTGACCCCACTCAC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCGCCGTTGTACTTGTTaGAGATGTCCTCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPRRCTC*RCPRLS
Trigger: ACTCAGACGAGGACATCTGCAACAAGTACAACGGCG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCCCAGGCCCCGGAGGTaGCAAGCCATTGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWPRPRR*QAIAPV
Trigger: CACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATATGGGGGAACGGCACCTaGCCGTTTGCCGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIWGNGT*PFAVHW
Trigger: CCAGTGCACGGCAAACGGGCAGGTGCCGTTCCCCCA...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTAATATCCACACCCTCTaGCCATGGAGGTGCACAAAA +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCNIHTL*PWRCTK
Trigger: TTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATT...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTAATATCCACACCCTCTaGCCATGGAGGTGCACAAAA +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLNIHTL*PWRCTK
Trigger: TTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATT...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGGGTTGCGATTCTCATaGAGAAGTGGCTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPGLRFS*RSGFGQ
Trigger: CTGCCCAAAGCCACTTCTGCATGAGAATCGCAACCC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGGTCCTCCACAGGCCTaGCACTGGCTATACATTCCA +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRGPPQA*HWLYIP
Trigger: TGGAATGTATAGCCAGTGCCAGGCCTGTGGAGGACC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ACTTTCATTATAATTGTGTTGAATGTGGATAAGATAGCTTGGCATGCCTCCTATCGCCTCGCAGACGTATaGCCCGGTGTCCGCGGACGT +
Preference number: 4 (lower is better)
Translates to: TFIIIVLNVDKIAWHASYRLADV*PGVRGR
Trigger: ACGTCCGCGGACACCGGGCCATACGTCTGCGAGGCG...ATAGGAGGCATGCCAAGCTATCTTATCCACATTCAACACAATTATAATGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTGAAAGGCCGTCGCCCTaGCCGGTTCAAAAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESERPSP*PVQKRS
Trigger: GGAGCGCTTTTGAACCGGCCAGGGCGACGGCCTTTC...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGAAGGGGGACCCCCATaGCTTGACATCCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNEGGPP*LDIRCP
Trigger: TGGACATCGGATGTCAAGCCATGGGGGTCCCCCTTC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCCGCTGGGTGAACACTaGAGCGATATTGGTTACATC +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPPLGEH*SDIGYI
Trigger: GATGTAACCAATATCGCTCCAGTGTTCACCCAGCGG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCCCGGGGGTCATGTGTaGCACCACAGTGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWPGGHV*HHSAAW
Trigger: CCACGCTGCACTGTGGTGCCACACATGACCCCCGGG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACACCACGGCGTGGCTGTaGGAAGAATTAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNTTAWL*EELGLT
Trigger: GGTCAGCCCTAATTCTTCCCACAGCCACGCCGTGGT...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGAGAGCACCACGGCGTaGCTGTGGGAAGAATTAGGG +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNESTTA*LWEELG
Trigger: CCCTAATTCTTCCCACAGCCACGCCGTGGTGCTCTC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGCACTCCAGAAGAAATaGTGGATGAAGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGALQKK*WMKSPG
Trigger: GCCTGGTGACTTCATCCACCATTTCTTCTGGAGTGC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAGGGGCCTGCAGGGTCTaGATGACCCGGGAAGACGGA +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIGACRV*MTREDG
Trigger: TCCGTCTTCCCGGGTCATCCAGACCCTGCAGGCCCC...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGATGTGGGGGCTGCTGCTaGCCAGGCGGTAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRCGGCC*PGGRQS
Trigger: AGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACA...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTGCCGGGGTGGGGACCTaGTCCCGTTCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESAGVGT*SRSSWR
Trigger: TCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGC...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCGTAGTCAGAGTCCGTaGCCTCAGATTCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGRSQSP*PQILMH
Trigger: ATGCATCAGAATCTGAGGCCACGGACTCTGACTACG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCAGGAGGTTCTGAGGTaGATGAGGCAGTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPQEVLR*MRQFNH
Trigger: GTGATTGAACTGCCTCATTCACCTCAGAACCTCCTG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGATCACCTCCGGGCTGGTaGTGTTCCGCTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRSPPGW*CSAAGT
Trigger: AGTACCAGCAGCGGAACATCACCAGCCCGGAGGTGA...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACCCATTGATAAACTGCTaGGGCGGAGGGTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNPLINC*GGGFHR
Trigger: CCTGTGGAACCCTCCGCCTCAGCAGTTTATCAATGG...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACCTGCAGGGTCTGGATaGCCCGGGAAGACGGACTGT +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIPAGSG*PGKTDC
Trigger: ACAGTCCGTCTTCCCGGGTCATCCAGACCCTGCAGG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATATCTCCAGCCGGTCACTaGCGACTTGGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDISPAGH*RLGPLL
Trigger: CAGCAGTGGCCCAAGTCGTCAGTGACCGGCTGGAGA...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCCCATGGTTTCAGGTGTaGCAACATCTCTTGCTATGC +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPPWFQV*QHLLLC
Trigger: GCATAGCAAGAGATGTTGGCACACCTGAAACCATGG...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGCGGTGGGCACTCCCTaGAAGGTGTACTCGGTCACT +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRAVGTP*KVYSVT
Trigger: AGTGACCGAGTACACCTTGCAGGGAGTGCCCACCGC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTCGGTGGCTGTGAACTaGCTCACTGTGGCGCCGACC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWSVAVN*LTVAPT
Trigger: GGTCGGCGCCACAGTGAGGCAGTTCACAGCCACCGA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCTTCGTTCTGGCTGTCTaGCTCCCAGTAGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSFVLAV*LPVVNL
Trigger: AAGATTTACTACTGGGAGGCAGACAGCCAGAACGAA...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGGAGGCGCGGCGCTTTaGTCACACGAAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRGGAAL*SHEGGE
Trigger: TTCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTGGAGTTAGGAACTGTTaGTTCTCAAATGCCGCATTG +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLGVRNC*FSNAAL
Trigger: CAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCC...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCTTCCAAAGCTGTaGAGGCCACTGGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRRLPKL*RPLVIL
Trigger: GAGAATCACCAGTGGCCTCCACAGCTTTGGAAGACG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGTGATTTCATTATCATGATAACAAAAGGCTGTTGTGTTCACTTTCTGTGCGATGAAAGGCCGTCGCCCTaGCCGGTTCAAAAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GDFIIMITKGCCVHFLCDERPSP*PVQKRS
Trigger: GGAGCGCTTTTGAACCGGCCAGGGCGACGGCCTTTC...ATCGCACAGAAAGTGAACACAACAGCCTTTTGTTATCATGATAATGAAATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTGCATCCTTGTACCACTaGAGGGTGGGAAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESASLYH*RVGRGT
Trigger: GGTCCCCCTTCCCACCCTCCAGTGGTACAAGGATGC...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCTTGTATCGAGGATTCTaGAGCCTGCTGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPLYRGF*SLLMEM
Trigger: CATCTCCATCAGCAGGCTCCAGAATCCTCGATACAA...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCCCCTCCTTCATTGCTaGCGAAGCACTGGAAGATTC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRPLLHC*RSTGRF
Trigger: GAATCTTCCAGTGCTTCGCCAGCAATGAAGGAGGGG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTACACTGGAGCGATATTaGTTACATCCAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCTLERY*LHPGRC
Trigger: ACACCTACCTGGATGTAACCAATATCGCTCCAGTGT...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTCCGGACAGAGCCACTaGCCAGAATGTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRSGQSH*PECGFL
Trigger: GAGAAAACCACATTCTGGCCAGTGGCTCTGTCCGGA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGTCTCGGCGCTGTACTaGCCCCTGCCCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRVSALY*PLPTSF
Trigger: GAATGAAGTGGGCAGGGGCCAGTACAGCGCCGAGAC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGCCACTGCTGAGGACTaGAGGTCTGAGCGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRATAED*RSERQY
Trigger: GTACTGGCGCTCAGACCTCCAGTCCTCAGCAGTGGC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGCACGATGTGGCTCCTaGGCTCGGGATCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRARCGS*ARDPGL
Trigger: AAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTGCACGATGTGGCTCCTaGGCTCGGGATCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESARCGS*ARDPGL
Trigger: AAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGC...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGAACACGAGCCTCACTaGTGGGCCTGGGGCATCGTC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWEHEPH*WAWGIV
Trigger: GACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCTGGCTGGCCGTGAGTaGGGTCACCTGCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWLAGRE*GHLHVL
Trigger: CAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATATGGGTGCGCCCCTGCTaGGGGTCACTCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIWVRPC*GSLLGP
Trigger: TGGACCTAAGAGTGACCCCCAGCAGGGGCGCACCCA...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTGGGTGCGCCCCTGCTaGGGGTCACTCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWWVRPC*GSLLGP
Trigger: TGGACCTAAGAGTGACCCCCAGCAGGGGCGCACCCA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTCACAGACTCCTCCATaGTGGAGATCCCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRSQTPP*WRSPFL
Trigger: CAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCGTAGTCAGAGTCCGTaGCCTCAGATTCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPRSQSP*PQILMH
Trigger: ATGCATCAGAATCTGAGGCCACGGACTCTGACTACG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCTCTGGTCCGTATCCATaGAACTTCCCATATATGCGA +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPSGPYP*NFPYMR
Trigger: TCGCATATATGGGAAGTTTCATGGATACGGACCAGA...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCATCGCTGCACGTCCTTaGGAAACTGTTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRIAARP*ETVFLW
Trigger: CCAGAGGAAAACAGTTTCTCAAGGACGTGCAGCGAT...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGATTCTGGAGCCTGCTaGTGGAGATGGCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNDSGAC*WRWHPC
Trigger: ACAAGGATGCCATCTCCATCAGCAGGCTCCAGAATC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACCACTGGCCGCTGGGTaGACACTGGAGCGATATTGG +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIPLAAG*TLERYW
Trigger: CCAATATCGCTCCAGTGTTCACCCAGCGGCCAGTGG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTCTTGTAGCCCAGTATaGGCCCATTCTGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRSCSPV*AHSGPV
Trigger: AACAGGACCAGAATGGGCTCATACTGGGCTACAAGA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCCTCTGTCTCTGAACTaGAGTCACTGTCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRPLSLN*SHCPQC
Trigger: ACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGGAGCTTATCCAGGCTaGGGGTGTAGGATGTGGCGC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWGAYPG*GCRMWR
Trigger: GCGCCACATCCTACACCCTCAGCCTGGATAAGCTCC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTCTAGACACTGCCAAGTaGGAACATTTCAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLLDTAK*EHFRNR
Trigger: TCTGTTTCTGAAATGTTCTCACTTGGCAGTGTCTAG...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTCCAACGTTTGACAGATaGACCTTCCATGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILAPTFDR*TFHGEL
Trigger: CAACTCTCCATGGAAGGTGCATCTGTCAAACGTTGG...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCAGCCTGAAGATGTATaGGGACTCCGGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWQPEDV*GLRGQV
Trigger: GACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACAGCCTGAAGATGTATaGGGACTCCGGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIQPEDV*GLRGQV
Trigger: GACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGGCAGCTCTCGCACCTaGATGGTGAAGTACCGGATG +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRGSSRT*MVKYRM
Trigger: CATCCGGTACTTCACCATGCAGGTGCGAGAGCTGCC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGCGTCTTGGCCTCAGTaGCTGACCCGGCTTCATACT +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRASWPQ*LTRLHT
Trigger: AGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCAGATCCCCTTTCCTGTaGTGCAGTTCTTATACTTCT +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSRSPFL*CSSYTS
Trigger: AGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCT...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTGGTTCACGAAGGAGTaGTTGGGCAGCGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWWFTKE*LGSASS
Trigger: CGAGGACGCGCTGCCCAAGCACTCCTTCGTGAACCA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGGAGGCGCGGCGCTTTaGTCACACGAAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWGGAAL*SHEGGE
Trigger: TTCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCTCTCTGGGCTCACCTaGCTGGAATCTCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWLSGLT*LESLPW
Trigger: CCAGGGCAGAGATTCCAGGCAGGTGAGCCCAGAGAG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GCTCCGTACAGATCAAGGTTTACTAAGAGTGGAGGGGAGACGGAAAACATGAGCATTAGGCAAACATCATaGTTCAGCCCAGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: APYRSRFTKSGGETENMSIRQTS*FSPVTV
Trigger: AACTGTGACTGGGCTGAAGCATGATGTTTGCCTAAT...GCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGGCATCACTGGTTGTaGTGGCGAGGATCACCAGCT +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRRHHWL*WRGSPA
Trigger: AGCTGGTGATCCTCGCCACCACAACCAGTGATGCCG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GTTTATTCAGCAGAAATTCAACAGAGGCATGGCCAAGTTTGTCAAGTATTAAGGCCGGGGGAACCACAATaGTTGGGGCCATGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VYSAEIQQRHGQVCQVLRPGEPQ*LGPWFQ
Trigger: CTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGG...CCTTAATACTTGACAAACTTGGCCATGCCTCTGTTGAATTTCTGCTGAATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CCA 90 bp GTTGTGTTCACTTTCTGTGCGATAATTAATTTCTGGGAACTGTCTTCCAGAGCTGGTCCTCCACAGGCCTaGCACTGGCTATACATTCCA +
Preference number: 4 (lower is better)
Translates to: VVFTFCAIINFWELSSRAGPPQA*HWLYIP
Trigger: TGGAATGTATAGCCAGTGCCAGGCCTGTGGAGGACC...AGCTCTGGAAGACAGTTCCCAGAAATTAATTATCGCACAGAAAGTGAACACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAGTCTCGGCGCTGTACTaGCCCCTGCCCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIVSALY*PLPTSF
Trigger: GAATGAAGTGGGCAGGGGCCAGTACAGCGCCGAGAC...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACTTTTCGGGGGAGCACTaGGTGGTTCTTCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNFSGEH*VVLQVA
Trigger: TGCTACCTGAAGAACCACCCAGTGCTCCCCCGAAAA...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCAATCCACCTGGAGATaGACGTTTTCCCGTCATAGC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRQSTWR*TFSRHS
Trigger: GCTATGACGGGAAAACGTCCATCTCCAGGTGGATTG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAGCACGATGTGGCTCCTaGGCTCGGGATCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIARCGS*ARDPGL
Trigger: AAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGC...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGGAGAGGGCCAGCGTaGTGGCTTCCAGCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWRRGPA*WLPALR
Trigger: TCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCT...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTATACAAAACTCTCCTTaGTCTCCTGGGGCCATACTC +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPIQNSP*SPGAIL
Trigger: GAGTATGGCCCCAGGAGACCAAGGAGAGTTTTGTAT...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 72 bp CGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTaGCTTTATTTGCAGACACTGTTGCTTTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: RGESGACVLRAV*LYLQTLLLFIF
Trigger: AAAGATGAAAAGCAACAGTGTCTGCAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTAAGCCATTGCACCAGTaGAATACACCTTCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCKPLHQ*NTPSLK
Trigger: TTTAAGAGAAGGTGTATTTCACTGGTGCAATGGCTT...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAGCGTTGAGAAGGGTGTaGGCCGCTGGTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIALRRV*AAGSLE
Trigger: TTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGC...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTAGGCATGGCCATCTCTaGGCTGTTAAGTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: WSPFIASLPRNSSAHILARHGHL*AVKFSK
Trigger: TTTGGAAAACTTAACAGCTCAGAGATGGCCATGCCT...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACGTCTGTTGCAAAGATaGCGTGAGGGGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIRLLQR*REGLEA
Trigger: TGCCTCCAGCCCCTCACGTCATCTTTGCAACAGACG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCTTGGAATAATCTTGTaGCCTTCTCTAAACCAAGTC +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCLGIIL*PSLNQV
Trigger: GACTTGGTTTAGAGAAGGGCACAAGATTATTCCAAG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GGTGATTTCATTATCATGATAACAAAAGGCTGTTGTGTTCACTTTCTGTGCGATCCACCACACTTCTGTTaGCCGGGGGAACCACAATGG +
Preference number: 4 (lower is better)
Translates to: GDFIIMITKGCCVHFLCDPPHFC*PGEPQW
Trigger: CCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGG...ATCGCACAGAAAGTGAACACAACAGCCTTTTGTTATCATGATAATGAAATCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR GCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAACCTTCAGCCAGCGCTaGCAGTTCCCTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDITFSQR*QFPLTS
Trigger: GGAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGT...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTGTCCCTCAGTCCACTaGAGCGTCAGTTCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWCPSVH*SVSSEA
Trigger: CGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGATTCTTATTCTGCCCGTaGAGGACGAGGGCGAACACC +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRFLFCP*RTRANT
Trigger: GGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAA...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGCGGAGTTGACCGTGTaGTGTGTTCGGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWAELTV*CVRGRR
Trigger: TCTCCTTCCCCGAACACAGCACACGGTCAACTCCGC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGGCTATTCTGTTGCTTaGAATAATCTTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGGYSVA*NNLVPF
Trigger: GAAGGGCACAAGATTATTCCAAGCAACAGAATAGCC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAATGCCCCGGCATCACTaGTTGTGGTGGCGAGGATCA +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIMPRHH*LWWRGS
Trigger: TGATCCTCGCCACCACAACCAGTGATGCCGGGGCAT...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACCAAGGTGGTCTCACTaGATCCAGCCACCACACTTC +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRPRWSH*IQPPHF
Trigger: GAAGTGTGGTGGCTGGATCCAGTGAGACCACCTTGG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCCACAGGCCTGGCACTaGCTATACATTCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESPQAWH*LYIPRW
Trigger: CCACCTTGGAATGTATAGCCAGTGCCAGGCCTGTGG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAACTGTGGTGTCCACTaGCCGCTGGGTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWNCGVH*PLGEHW
Trigger: CCAGTGTTCACCCAGCGGCCAGTGGACACCACAGTT...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCCACTGGCCAGAATGTaGTTTTCTCTTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRPLARM*FSLFQV
Trigger: CACCTGGAAAAGAGAAAACCACATTCTGGCCAGTGG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGGGAGCCCTCTGTGTTaGCCGCATAGCAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWGSPLC*PHSRCS
Trigger: ACTACACCTGCTATGCGGCCAACACAGAGGGCTCCC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATATGGTCCTCAGGAGGGTaGACGATGGACGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIWSSGG*TMDVRF
Trigger: GAATCGGACGTCCATCGTCCACCCTCCTGAGGACCA...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCAGATGCACCTTCCATaGAGAGTTGTTTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPQMHLP*RVVFRE
Trigger: CTCTCTGAAAACAACTCTCCATGGAAGGTGCATCTG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGTTGTGCTCTGTTTCTaGGGGTGGCTGCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWVVLCF*GWLPLD
Trigger: GTCCAGTGGCAGCCACCCCCAGAAACAGAGCACAAC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATATCAGGACAGAGGACGTaGTGTGTGGCGTCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDISGQRT*CVASLR
Trigger: TCTCAGCGACGCCACACACCACGTCCTCTGTCCTGA...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACACCAGGTACTTGGTATaGCTGGTCAGGTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNTRYLV*LVRFFS
Trigger: GCTGAAGAACCTGACCAGCCATACCAAGTACCTGGT...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGTAACAAGCAATTCTaGAGACGCCGTCCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRRNKQF*RRRPVS
Trigger: GGACACGGGACGGCGTCTCCAGAATTGCTTGTTACG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCTCTCCTTGGTCTCCTaGGGCCATACTCAGCAACGC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWLSLVS*GHTQQR
Trigger: GCGTTGCTGAGTATGGCCCCAGGAGACCAAGGAGAG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTCTGGTCCGTATCCATaGAACTTCCCATATATGCGA +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRSGPYP*NFPYMR
Trigger: TCGCATATATGGGAAGTTTCATGGATACGGACCAGA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGATGTGGAGGCCACTGGTaGTTCTCACTCCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRCGGHW*FSLHSS
Trigger: AGAGGAATGGAGTGAGAATCACCAGTGGCCTCCACA...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ACTTTCTGTGCGATAATTAATTTCTGGGAACTGTCTTCCAGAGCTGGTTTACTTTGTGGAGGCCACTGGTaGTTCTCACTCCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: TFCAIINFWELSSRAGLLCGGHW*FSLHSS
Trigger: AGAGGAATGGAGTGAGAATCACCAGTGGCCTCCACA...AAGTAAACCAGCTCTGGAAGACAGTTCCCAGAAATTAATTATCGCACAGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR TCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTTTCTCTTTTCCAGGTaGTGGCGGGTTTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWFLFSR*WRVWEP
Trigger: GGGCTCCCAAACCCGCCATCACCTGGAAAAGAGAAA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACTCAGGGCCAACGTTTaGCAGATGCACCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDILRANV*QMHLPW
Trigger: CCATGGAAGGTGCATCTGTCAAACGTTGGCCCTGAG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCGAAGCAATCTGAAATaGGCCACGTTGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWRSNLK*ATLGVG
Trigger: ACCCACCCCCAACGTGGCTCATTTCAGATTGCTTCG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGAACGTTTAGGGACCTaGCGGCTCCCTAAACCAGAA +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRERLGT*RLPKPE
Trigger: TTCTGGTTTAGGGAGCCGTCAGGTCCCTAAACGTTC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTGTGCCAACATCTCTTaGTATGCTCAAATGAATGAA +
Preference number: 4 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCCANIS*YAQMNE
Trigger: TTCATTCATTTGAGCATAGCAAGAGATGTTGGCACA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGTGCTGTTCAGGGTGTaGGTGAGACGAGAGTCGTTC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWVLFRV*VRRESF
Trigger: GAACGACTCTCGTCTCACGCACACCCTGAACAGCAC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGAGGTGCCAAGCCATTaGACCAGTGAAATACACCTT +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNEVPSH*TSEIHL
Trigger: AAGGTGTATTTCACTGGTGCAATGGCTTGGCACCTC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACCTCTGCCCATGGAGGTaGACAAAACATCTAGGTAAG +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNLCPWR*TKHLGK
Trigger: CTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAG...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGGGGAACTGTGGGTTaGGATTCTCATGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRRGTVG*DSHAEV
Trigger: CACTTCTGCATGAGAATCGCAACCCACAGTTCCCCG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGATAGCTACACTGTGTaGCAAGAATGCGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PEDKELGTVASQMPHCSGDSYTV*QECVRN
Trigger: ATTTCTTACGCATTCTTGGCACACAGTGTAGCTATC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGATTCAGACTGGATCCATaGTACCAGGACGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRFRLDP*YQDADP
Trigger: TGGGTCAGCGTCCTGGTAGCATGGATCCAGTCTGAA...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ACTTTCTGTGCGATAATTAATTTCTGGGAACTGTCTTCCAGAGCTGGTTTACTTGGGAACCACAATGGTTaGGGCCATGGTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TFCAIINFWELSSRAGLLGNHNG*GHGFRC
Trigger: ACACCTGAAACCATGGCCCCAACCATTGTGGTTCCC...AAGTAAACCAGCTCTGGAAGACAGTTCCCAGAAATTAATTATCGCACAGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCCAAGGTGGTCTCACTaGATCCAGCCACCACACTTC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWPRWSH*IQPPHF
Trigger: GAAGTGTGGTGGCTGGATCCAGTGAGACCACCTTGG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCCACAGGCCTGGCACTaGCTATACATTCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWPQAWH*LYIPRW
Trigger: CCACCTTGGAATGTATAGCCAGTGCCAGGCCTGTGG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACCACAGGCCTGGCACTaGCTATACATTCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIPQAWH*LYIPRW
Trigger: CCACCTTGGAATGTATAGCCAGTGCCAGGCCTGTGG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGGTCCTCCACAGGCCTaGCACTGGCTATACATTCCA +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWGPPQA*HWLYIP
Trigger: TGGAATGTATAGCCAGTGCCAGGCCTGTGGAGGACC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp GGTGGTGATTTCATTATCATGATAACAAAAGGCTGTTGTGTTCACTTTCTGTGCCGTCTTCCAAAGCTGTaGAGGCCACTGGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: GGDFIIMITKGCCVHFLCRLPKL*RPLVIL
Trigger: GAGAATCACCAGTGGCCTCCACAGCTTTGGAAGACG...GCACAGAAAGTGAACACAACAGCCTTTTGTTATCATGATAATGAAATCACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCCCCAATGTCGTTGGTaGCTTTCAGGCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWPQCRW*LSGAAC
Trigger: ACAAGCTGCGCCTGAAAGCCACCAACGACATTGGGG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAAGACTGGCTCCTGGGTaGCACTGGTCAGATACTGCT +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIRLAPG*HWSDTA
Trigger: AGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCT...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
3UTR CAA 72 bp GGAACTGTGGGTTGCGATTCTCATGCAGAAGTGGCTTaGGGCAGAGCATCTAGGATTTTTGGTTTAGAATAT +
Preference number: 4 (lower is better)
Translates to: GTVGCDSHAEVA*GRASRIFGLEY
Trigger: ATATTCTAAACCAAAAATCCTAGATGCTCTGCCCAAAGCCACTTCTGCATGAGAATCGCAACCCACAGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTGTGGAGGCCACTGGTaGTTCTCACTCCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWCGGHW*FSLHSS
Trigger: AGAGGAATGGAGTGAGAATCACCAGTGGCCTCCACA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCTGGGCTCTCGCCGATaGTGTTATAGGCGGTCATTA +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWLGSRR*CYRRSL
Trigger: TAATGACCGCCTATAACATCATCGGCGAGAGCCCAG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGGTGGAGGTTATTTCTaGGAACGCCAGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWGGGYF*ERQKAG
Trigger: CCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCTGTGCCAACATCTCTTaGTATGCTCAAATGAATGAA +
Preference number: 4 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPCANIS*YAQMNE
Trigger: TTCATTCATTTGAGCATAGCAAGAGATGTTGGCACA...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACCAGGGAAAAACGTTTaGTCTTCAAACCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRPGKNV*SSNPRS
Trigger: GCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGATAGCTACACTGTGTaGCAAGAATGCGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPDSYTV*QECVRN
Trigger: ATTTCTTACGCATTCTTGGCACACAGTGTAGCTATC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ACTTTCATTATAATTGTGTTGAATGTGGATAAGATAGCTTGGCATGCCTCCTATCCAAGGTGGTCTCACTaGATCCAGCCACCACACTTC +
Preference number: 4 (lower is better)
Translates to: TFIIIVLNVDKIAWHASYPRWSH*IQPPHF
Trigger: GAAGTGTGGTGGCTGGATCCAGTGAGACCACCTTGG...ATAGGAGGCATGCCAAGCTATCTTATCCACATTCAACACAATTATAATGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CCA 90 bp TTTCTGGGAACTGTCTTCCAGAGCTGGTTTACTTTCATTATAATTGTGTTGAATCCACAGGCCTGGCACTaGCTATACATTCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FLGTVFQSWFTFIIIVLNPQAWH*LYIPRW
Trigger: CCACCTTGGAATGTATAGCCAGTGCCAGGCCTGTGG...ATTCAACACAATTATAATGAAAGTAAACCAGCTCTGGAAGACAGTTCCCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACCCCTCCTTCATTGCTaGCGAAGCACTGGAAGATTC +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIPLLHC*RSTGRF
Trigger: GAATCTTCCAGTGCTTCGCCAGCAATGAAGGAGGGG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACACACTGGAGCGATATTaGTTACATCCAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNTLERY*LHPGRC
Trigger: ACACCTACCTGGATGTAACCAATATCGCTCCAGTGT...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATATTTTCGGGGGAGCACTaGGTGGTTCTTCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIFSGEH*VVLQVA
Trigger: TGCTACCTGAAGAACCACCCAGTGCTCCCCCGAAAA...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCATGTCAGTAAAATCTaGGTCGAGCTGACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESHVSKI*VELTAS
Trigger: CGAGGCTGTCAGCTCGACCCAGATTTTACTGACATG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACACACCCTCTGCCCATaGAGGTGCACAAAACATCTA +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRHTLCP*RCTKHL
Trigger: TAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCTTGGAATAATCTTGTaGCCTTCTCTAAACCAAGTC +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRLGIIL*PSLNQV
Trigger: GACTTGGTTTAGAGAAGGGCACAAGATTATTCCAAG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCCAACGTTTGACAGATaGACCTTCCATGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESPTFDR*TFHGEL
Trigger: CAACTCTCCATGGAAGGTGCATCTGTCAAACGTTGG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTTATACTTCTTATTCTaGCCGTGCAGGACGAGGGCG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWLYFLF*PCRTRA
Trigger: CGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTCCCCTTTCCTGTGCTaGAGTTCTTATACTTCTTAT +
Preference number: 4 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRSPFLC*SSYTSY
Trigger: ATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACGGCTATTCTGTTGCTTaGAATAATCTTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNGYSVA*NNLVPF
Trigger: GAAGGGCACAAGATTATTCCAAGCAACAGAATAGCC...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACCTCAACAATCCACCTaGAGATGGACGTTTTCCCGT +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIPQQST*RWTFSR
Trigger: ACGGGAAAACGTCCATCTCCAGGTGGATTGTTGAGG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGGTACTTGGTATGGCTaGTCAGGTTCTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWGTWYG*SGSSAS
Trigger: TGAGGCTGAAGAACCTGACCAGCCATACCAAGTACC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGACCAGGTACTTGGTATaGCTGGTCAGGTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWTRYLV*LVRFFS
Trigger: GCTGAAGAACCTGACCAGCCATACCAAGTACCTGGT...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAAAGCCACATCCTCATaGCTGCAGAGAGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWKATSS*LQRAVI
Trigger: GATGACTGCTCTCTGCAGCCATGAGGATGTGGCTTT...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACCAACGTTTGACAGATaGACCTTCCATGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDIPTFDR*TFHGEL
Trigger: CAACTCTCCATGGAAGGTGCATCTGTCAAACGTTGG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTATTCTCATGCAGAAGTaGCTTTGGGCAGAGCATCTA +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESILMQK*LWAEHL
Trigger: TAGATGCTCTGCCCAAAGCCACTTCTGCATGAGAAT...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAAGGCCAAAATCTACCTaGAAACATCCAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRRPKST*KHPALF
Trigger: GAACAGAGCTGGATGTTTCCAGGTAGATTTTGGCCT...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTTCGTTATGTGTCCATaGTGGACTCCGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWFVMCP*WTPWKS
Trigger: AGATTTCCACGGAGTCCACCATGGACACATAACGAA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ACTTTCTGTGCGATAATTAATTTCTGGGAACTGTCTTCCAGAGCTGGTTTACTTGTGGATAAGATAGCTTaGCATGCCTCCTATATTGAC +
Preference number: 4 (lower is better)
Translates to: TFCAIINFWELSSRAGLLVDKIA*HASYID
Trigger: GTCAATATAGGAGGCATGCCAAGCTATCTTATCCAC...AAGTAAACCAGCTCTGGAAGACAGTTCCCAGAAATTAATTATCGCACAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR TCA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATACTAGACACTGCCAAGTaGGAACATTTCAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: INKKAPGDSKDAFISCDILDTAK*EHFRNR
Trigger: TCTGTTTCTGAAATGTTCTCACTTGGCAGTGTCTAG...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCCAGCATCGAGCTTCTaGAAAGATGGAATAATGTAC +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWPASSF*KDGIMY
Trigger: GTACATTATTCCATCTTTGCAGAAGCTCGATGCTGG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGATCCCCTTTCCTGTaGTGCAGTTCTTATACTTCT +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWRSPFL*CSSYTS
Trigger: AGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCT...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTAAAAAGAAACAAACCTaGTTCCTGCAGCGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESKKKQT*FLQRSY
Trigger: GTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTT...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR TCA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCTATGCTCAAATGAATaGATGGGCTTGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KCHDVVSKTREQQTYLESLCSNE*MGLSCF
Trigger: AAAACAAGACAAGCCCATTCATTCATTTGAGCATAG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR GCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAATTTGCAGACACTGTTaGTTTTCATCTTTCCCATGT +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRICRHC*FSSFPC
Trigger: ACATGGGAAAGATGAAAAGCAACAGTGTCTGCAAAT...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACTCAGCAGTAAAATATaGTGGCTCTATGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRLSSKI*WLYDEK
Trigger: CTTTTCATCATAGAGCCACCATATTTTACTGCTGAG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ACTTTCTGTGCGATAATTAATTTCTGGGAACTGTCTTCCAGAGCTGGTTTACTTAATTCAACAGAGGCATaGCCAAGTTTGTCAAGTATT +
Preference number: 4 (lower is better)
Translates to: TFCAIINFWELSSRAGLLNSTEA*PSLSSI
Trigger: AATACTTGACAAACTTGGCCATGCCTCTGTTGAATT...AAGTAAACCAGCTCTGGAAGACAGTTCCCAGAAATTAATTATCGCACAGAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR TCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCTATGCTCAAATGAATaGATGGGCTTGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWLCSNE*MGLSCF
Trigger: AAAACAAGACAAGCCCATTCATTCATTTGAGCATAG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCTCAGCAGTAAAATATaGTGGCTCTATGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWLSSKI*WLYDEK
Trigger: CTTTTCATCATAGAGCCACCATATTTTACTGCTGAG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CCA 90 bp ACTTTCATTATAATTGTGTTGAATGTGGATAAGATAGCTTGGCATGCCTCCTATGCGATAATTAATTTCTaGGAACTGTCTTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TFIIIVLNVDKIAWHASYAIINF*ELSSRA
Trigger: AGCTCTGGAAGACAGTTCCCAGAAATTAATTATCGC...ATAGGAGGCATGCCAAGCTATCTTATCCACATTCAACACAATTATAATGAAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS GCA 90 bp TGCAGCTGCGCGCCCGCCTCGGAGCCCGCCACCGCCTCGTACCTGTaGGGCGCAGGTGCGCGGCCCTGGGCCCTGCGCTTCCATGAGTTG +
Preference number: 5 (lower is better)
Translates to: CSCAPASEPATASYL*GAGARPWALRFHEL
Trigger: CAACTCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGTGGCGGGCTCCGAGGCGGGCGCGCAGCTGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000615806.4
CDS-3UTR CAA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACCCCTGCAGGATGCCGTaGGCCGCCGCAGGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDPCRMP*AAAGSP
Trigger: GGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGGG...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS GCA 90 bp CTGCGGGGGCGCGGTGGGCACTCCCTGCAAGGTGTACTCGGTCACTaGCCTGCTGAAGACGCCCAGACCGGCCCCGTTGTACGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: LRGRGGHSLQGVLGH*PAEDAQTGPVVRRH
Trigger: GTGGCGGCGTACAACGGGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGACCGAGTACACCTTGCAGGGAGTGCCCACCGCGCCCCCGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 90 bp TTAAAATATGGGGCGCACCTACCTTGCGCCAGCGCCCGGAGCAAGTaGAGCTGCAGCGCCAGCAGCGCCCACCAGCCGCGGCGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LKYGAHLPCASARSK*SCSASSAHQPRRPG
Trigger: GCCGGGCCGCCGCGGCTGGTGGGCGCTGCTGGCGCTGCAGCTGCACTTGCTCCGGGCGCTGGCGCAAGGTAGGTGCGCCCCATATTTTAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615806.4
CDS-3UTR CAA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTGGGGCGCACCTACCTaGCGCCAGCGCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: QDRGRGRPGVHEASRERVWGAPT*RQRPEQ
Trigger: TTGCTCCGGGCGCTGGCGCAAGGTAGGTGCGCCCCA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615806.4
CDS-3UTR CAA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCCCCTGCAGGATGCCGTaGGCCGCCGCAGGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCPCRMP*AAAGSP
Trigger: GGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGGG...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGGGCCCGGCTGTGATATaGGCTTGGAGCTCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQGPAVI*AWSSGP
Trigger: CGGGCCCGAGCTCCAAGCCAATATCACAGCCGGGCC...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACGGCCCGGCTGTGATATaGGCTTGGAGCTCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDGPAVI*AWSSGP
Trigger: CGGGCCCGAGCTCCAAGCCAATATCACAGCCGGGCC...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCAGGTGATGGCGGGTTaGGGAGCCCCGGACACCTCA +
Preference number: 5 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQQVMAG*GAPDTS
Trigger: TGAGGTGTCCGGGGCTCCCAAACCCGCCATCACCTG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCCCTGCAGGATGCCGTaGGCCGCCGCAGGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHPCRMP*AAAGSP
Trigger: GGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGGG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGCTGGGGAGAGGGGCTaGGGCTGGACCGATTCACCC +
Preference number: 5 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAAGERG*GWTDSP
Trigger: GGGTGAATCGGTCCAGCCCAAGCCCCTCTCCCCAGC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp GCGCGGTGGGCACTCCCTGCAAGGTGTACTCGGTCACTGCCCTGCTaGAGACGCCCAGACCGGCCCCGTTGTACGCCGCCACCTGTATCT +
Preference number: 5 (lower is better)
Translates to: ARWALPARCTRSLPC*RRPDRPRCTPPPVS
Trigger: AGATACAGGTGGCGGCGTACAACGGGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGACCGAGTACACCTTGCAGGGAGTGCCCACCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 90 bp TTAAAATATGGAGCAACATCATCTTGCGCCAGCGCCCGGAGCAAGTaGAGCTGCAGCGCCAGCAGCGCCCACCAGCCGCGGCGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LKYGATSSCASARSK*SCSASSAHQPRRPG
Trigger: GCCGGGCCGCCGCGGCTGGTGGGCGCTGCTGGCGCTGCAGCTGCACTTGCTCCGGGCGCTGGCGCAAGATGATGTTGCTCCATATTTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389531.7
ENST00000404826.7
CDS-3UTR CAA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCCCCGGCATCACTGGTaGTGGTGGCGAGGATCACCA +
Preference number: 5 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQPRHHW*WWRGSP
Trigger: TGGTGATCCTCGCCACCACAACCAGTGATGCCGGGG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGCCACGCAACACCCCGTaGTGCTCTGTTTCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGPRNTP*CSVSGG
Trigger: ACCCCCAGAAACAGAGCACAACGGGGTGTTGCGTGG...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGGCTCCTCCGGAGGTaGCCACACTATCCGCACGGA +
Preference number: 5 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAGLLRR*PHYPHG
Trigger: TCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGCCATCTCCGGCGGCGTaGAAGGCTGATATGCTGACC +
Preference number: 5 (lower is better)
Translates to: QDRGRGRPGVHEASRERVPSPAA*KADMLT
Trigger: GGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGG...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp TGCCGTTGGGCTCCTCCGGAGGTTGCCACACTATCCGCACGGAGGTaGGTCTCACTTCGGGGAACACGAGCCTCACTGGTGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: CRWAPPEVATLSARR*VSLRGTRASLVGLG
Trigger: CCCCAGGCCCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCCAACGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 90 bp CTGAAGATGTATGCGGACTCCGGGGCCAGGTCGGTGGCTGTGAACTaGCTCACTGTGGCGCCGACCTCCACGGTGGTGAAGGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LKMYADSGARSVAVN*LTVAPTSTVVKVWG
Trigger: CCCCCACACCTTCACCACCGTGGAGGTCGGCGCCACAGTGAGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATACATCTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 90 bp GGGATGGGGAGGCGAGAGCAGAGGTTAGAAGTGCGAAGTCCCAGATaGGAGCCCCATGCACCTGCCTGGTGGGTCGGCTTGCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GMGRREQRLEVRSPR*EPHAPAWWVGLQQP
Trigger: GGGCTGCTGCAAGCCGACCCACCAGGCAGGTGCATGGGGCTCGCATCTGGGACTTCGCACTTCTAACCTCTGCTCTCGCCTCCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS-3UTR CAA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGCCACCACACTTCTGTaGCCCGGGGGAACCACAATG +
Preference number: 5 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQATTLL*PGGTTM
Trigger: CATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCCACGCAACACCCCGTaGTGCTCTGTTTCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQPRNTP*CSVSGG
Trigger: ACCCCCAGAAACAGAGCACAACGGGGTGTTGCGTGG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGGAGAGGCCTTGGATCTaGTACTCGTGCGTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGERPWI*YSCVVL
Trigger: CAGCACGACGCACGAGTACAAGATCCAAGGCCTCTC...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCCTGGGGCATCGTCTTaGGTGCGCTCCAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCPGASS*VRSRMR
Trigger: CCTCATCCTGGAGCGCACCAAAGACGATGCCCCAGG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGTCCCCAATGTCGTaGGTGGCTTTCAGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQLSPMS*VAFRRS
Trigger: GCTGCGCCTGAAAGCCACCAACGACATTGGGGACAG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGCTGTCCCCAATGTCGTaGGTGGCTTTCAGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQLSPMS*VAFRRS
Trigger: GCTGCGCCTGAAAGCCACCAACGACATTGGGGACAG...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTCGCCCCAGGACACGTaGAGCGTGGTGGAGGTTATT +
Preference number: 5 (lower is better)
Translates to: QDRGRGRPGVHEASRERVSPQDT*SVVEVI
Trigger: AATAACCTCCACCACGCTCAACGTGTCCTGGGGCGA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCACCTTGCTCACCCCTaGTACAGGGGCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCHLAHP*YRGQGL
Trigger: GAGCCCTTGGCCCCTGTACAAGGGGTGAGCAAGGTG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGGGCTGTGATATTGGCTaGGAGCTCGGGCCCGTAGGT +
Preference number: 5 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQGCDIG*ELGPVG
Trigger: ACCTACGGGCCCGAGCTCCAAGCCAATATCACAGCC...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGGCAGCAAATCCTCCGTaGTCCAGGGTCACAGACTCC +
Preference number: 5 (lower is better)
Translates to: QDRGRGRPGVHEASRERVAANPP*SRVTDS
Trigger: GGAGTCTGTGACCCTGGACAACGGAGGATTTGCTGC...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCCGTGACCACATCCTaGCAGGGTGGGGCCGAAGCA +
Preference number: 5 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCSVTTS*QGGAEA
Trigger: TGCTTCGGCCCCACCCTGCAAGGATGTGGTCACGGA...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp CCTGCAGGATGCCGTTGGCCGCCGCAGGCTCGCCCCAGGACACGTTaGGCGTGGTGGAGGTTATTTCTGAGAACGCCAGAAAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PAGCRWPPQARPRTR*AWWRLFLRTPESWG
Trigger: CCCCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACCACGCTCAACGTGTCCTGGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 90 bp AGGATCTGTGGTATCGACACAGCACGAGGGTTATCAGGAGGCGGGTaGCAGGAGGGACCGCCGTGGCATGGGGCAGGCCCCCTTCGTGAA +
Preference number: 5 (lower is better)
Translates to: RICGIDTARGLSGGG*QEGPPWHGAGPLRE
Trigger: TTCACGAAGGGGGCCTGCCCCATGCCACGGCGGTCCCTCCTGGCACCCGCCTCCTGATAACCCTCGTGCTGTGTCGATACCACAGATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS-3UTR CAA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGATGGAGATGGCATCCTaGTACCACTGGAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGMEMAS*YHWRVG
Trigger: TCCCACCCTCCAGTGGTACAAGGATGCCATCTCCAT...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCCGCTGGCGAGCACTTaGTATCGAGGATTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQPLAST*YRGFWS
Trigger: GCTCCAGAATCCTCGATACAAAGTGCTCGCCAGCGG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGATCTCCCCTCCTTCATaGCTGGCGAAGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: QDRGRGRPGVHEASRERVISPPS*LAKHWK
Trigger: CTTCCAGTGCTTCGCCAGCAATGAAGGAGGGGAGAT...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCGCGCACACCCGGAATaGATAGGTACGAGCCGGAGT +
Preference number: 5 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCRAHPE*IGTSRS
Trigger: ACTCCGGCTCGTACCTATCAATTCCGGGTGTGCGCG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACAAGGTGCTCTTGACATaGAGGTGGCGGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDKVLLT*RWRLLS
Trigger: GCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTT...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp TGGGGCACCAGGAAGGTCTGGGGGCACTCCAGAAGAAATGGTGGATaGAGTCACCAGGCCAGTGCCCACGGCAGTCACAGCGGCCACGTC +
Preference number: 5 (lower is better)
Translates to: WGTRKVWGHSRRNGG*SHQASAHGSHSGHV
Trigger: GACGTGGCCGCTGTGACTGCCGTGGGCACTGGCCTGGTGACTTCATCCACCATTTCTTCTGGAGTGCCCCCAGACCTTCCTGGTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 90 bp GCAGAGGTTAGAAGTGCGAAGTCCCAGATGCGAGCCCCATGCACCTaGCTGGTGGGTCGGCTTGCAGCAGCCCTGGATGAGGCATCAGGG +
Preference number: 5 (lower is better)
Translates to: AEVRSAKSQMRAPCT*LVGRLAAALDEASG
Trigger: CCCTGATGCCTCATCCAGGGCTGCTGCAAGCCGACCCACCAGGCAGGTGCATGGGGCTCGCATCTGGGACTTCGCACTTCTAACCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS GCA 90 bp GCGAGAGCAGAGGTTAGAAGTGCGAAGTCCCAGATGCGAGCCCCATaGACCTGCCTGGTGGGTCGGCTTGCAGCAGCCCTGGATGAGGCA +
Preference number: 5 (lower is better)
Translates to: ARAEVRSAKSQMRAP*TCLVGRLAAALDEA
Trigger: TGCCTCATCCAGGGCTGCTGCAAGCCGACCCACCAGGCAGGTGCATGGGGCTCGCATCTGGGACTTCGCACTTCTAACCTCTGCTCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS-3UTR CAA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGCCACCACACTTCTGTaGCCCGGGGGAACCACAATG +
Preference number: 5 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCATTLL*PGGTTM
Trigger: CATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGATCTCCCCTCCTTCATaGCTGGCGAAGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQISPPS*LAKHWK
Trigger: CTTCCAGTGCTTCGCCAGCAATGAAGGAGGGGAGAT...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCAGGTGATGGCGGGTTaGGGAGCCCCGGACACCTCA +
Preference number: 5 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRQVMAG*GAPDTS
Trigger: TGAGGTGTCCGGGGCTCCCAAACCCGCCATCACCTG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGGCCATGCCAGAAGCTaGTATCCCTGGTTGATGCCA +
Preference number: 5 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQGHARS*YPWLMP
Trigger: TGGCATCAACCAGGGATACAAGCTTCTGGCATGGCC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGAGAGGCCTTGGATCTaGTACTCGTGCGTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: VSRGVDRVLCSGKERASVERPWI*YSCVVL
Trigger: CAGCACGACGCACGAGTACAAGATCCAAGGCCTCTC...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCCAGCCCCGACGGCGTaGAAGGCCTGCATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLPAPTA*KACICS
Trigger: GCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCTGG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGCAGCAAATCCTCCGTaGTCCAGGGTCACAGACTCC +
Preference number: 5 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCAANPP*SRVTDS
Trigger: GGAGTCTGTGACCCTGGACAACGGAGGATTTGCTGC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTAAGGTGCTCTTGACATaGAGGTGGCGGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCKVLLT*RWRLLS
Trigger: GCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTT...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGGTCAGCACGGCGCCGTaGTACTTGTTGCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: VSRGVDRVLCSGKERASVVSTAP*YLLQMS
Trigger: GGACATCTGCAACAAGTACAACGGCGCCGTGCTGAC...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTCTGCCGACTTCTCCTaGAGGCTCACGCTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCSADFS*RLTLSV
Trigger: GACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGA...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTATAGACTCCGGAAAGTaGCCTCCGTTCCGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAIDSGK*PPFRPE
Trigger: CTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTAT...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGTCTAAACCAAGTCACTaGAGGTCTGGGGTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGSKPSH*RSGVAG
Trigger: ACCAGCTACCCCAGACCTCAAGTGACTTGGTTTAGA...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGGGGAACCACAATGGTaGGGGCCATGGTTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCGEPQW*GPWFQV
Trigger: CACCTGAAACCATGGCCCCAACCATTGTGGTTCCCC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGCCACCACACTTCTGTaGCCCGGGGGAACCACAATG +
Preference number: 5 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARATTLL*PGGTTM
Trigger: CATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGTCCCGCGGAGTTGACCGTGTGCTGTGTTCGGGGAAGGAGAGGGCCAGCGTGTTGGAAATGACCAGGTaGGATGGGGCACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: VSRGVDRVLCSGKERASVLEMTR*DGAPGR
Trigger: CCTTCCTGGTGCCCCATCCAACCTGGTCATTTCCAA...CACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTTTGGAAATGACCAGGTaGGATGGGGCACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAALEMTR*DGAPGR
Trigger: CCTTCCTGGTGCCCCATCCAACCTGGTCATTTCCAA...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCCTGGGGCATCGTCTTaGGTGCGCTCCAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRPGASS*VRSRMR
Trigger: CCTCATCCTGGAGCGCACCAAAGACGATGCCCCAGG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTCTGTCCCCAATGTCGTaGGTGGCTTTCAGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARLSPMS*VAFRRS
Trigger: GCTGCGCCTGAAAGCCACCAACGACATTGGGGACAG...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCACCTTGCTCACCCCTaGTACAGGGGCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHHLAHP*YRGQGL
Trigger: GAGCCCTTGGCCCCTGTACAAGGGGTGAGCAAGGTG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGGTGATGGTCCGCGCTaGGACACGGAAGAAATAGGT +
Preference number: 5 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAGDGPR*DTEEIG
Trigger: ACCTATTTCTTCCGTGTCCAAGCGCGGACCATCACC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGGGAGGCGCGGCGCTTaGCTCACACGAAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLGRRGA*LTRRRR
Trigger: TCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCCC...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAGGGAGGCGCGGCGCTTaGCTCACACGAAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGGRRGA*LTRRRR
Trigger: TCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCCC...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGAAAGCCGACTCCTaGACTAGACACTGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQLKADS*TRHCQV
Trigger: CACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCAG...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGTCGTGTCCCGCGGAGTaGACCGTGTGCTGTGTTCGG +
Preference number: 5 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRSCPAE*TVCCVR
Trigger: CCGAACACAGCACACGGTCAACTCCGCGGGACACGA...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTCGTCTTGAAGCTGCTTaGGGCTGTGAGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAARLEAA*GCELSM
Trigger: CATGCTGAGCTCACAGCCCAAAGCAGCTTCAAGACG...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGTGGAGCAACATCATCTaGCGCCAGCGCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRWSNII*RQRPEQ
Trigger: TTGCTCCGGGCGCTGGCGCAAGATGATGTTGCTCCA...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389531.7
ENST00000404826.7
CDS-3UTR CAA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTCATCGCGCATCCACTaGAACTCCAAAGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCSSRIH*NSKGQL
Trigger: GAGCTGGCCTTTGGAGTTCAAGTGGATGCGCGATGA...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGGGGAACCACAATGGTaGGGGCCATGGTTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARGEPQW*GPWFQV
Trigger: CACCTGAAACCATGGCCCCAACCATTGTGGTTCCCC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCCCAGACCGGCCCCGTaGTACGCCGCCACCTGTATC +
Preference number: 5 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVPRPAP*YAATCI
Trigger: GATACAGGTGGCGGCGTACAACGGGGCCGGTCTGGG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGGAGAGGCCTTGGATCTaGTACTCGTGCGTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVEERPWI*YSCVVL
Trigger: CAGCACGACGCACGAGTACAAGATCCAAGGCCTCTC...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTGAGCGAGGGCTGATGTaGGAAATGACCAGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAAERGLM*EMTRLD
Trigger: ATCCAACCTGGTCATTTCCAACATCAGCCCTCGCTC...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGGGTTTTTGAGCGTCTaGGCCTCAGTGCCTGACCCG +
Preference number: 5 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTGFLSV*ASVPDP
Trigger: CGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCC...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCACCTTGCTCACCCCTaGTACAGGGGCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCHLAHP*YRGQGL
Trigger: GAGCCCTTGGCCCCTGTACAAGGGGTGAGCAAGGTG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGGGCTGTGATATTGGCTaGGAGCTCGGGCCCGTAGGT +
Preference number: 5 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRGCDIG*ELGPVG
Trigger: ACCTACGGGCCCGAGCTCCAAGCCAATATCACAGCC...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTCCCAGGGAAAAACGTTaGCTCTTCAAACCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCPREKR*LFKPQE
Trigger: CTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGG...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCTCGTGTCCCGCGGAGTaGACCGTGTGCTGTGTTCGG +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCSCPAE*TVCCVR
Trigger: CCGAACACAGCACACGGTCAACTCCGCGGGACACGA...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGTATACAAAACTCTCCTaGGTCTCCTGGGGCCATACT +
Preference number: 5 (lower is better)
Translates to: QDRGRGRPGVHEASRERVYTKLS*VSWGHT
Trigger: AGTATGGCCCCAGGAGACCAAGGAGAGTTTTGTATA...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp GGCCTCCGCTGGCGAGCACTTTGTATCGAGGATTCTGGAGCCTGCTaGTGGAGATGGCATCCTTGTACCACTGGAGGGTGGGAAGGGGGA +
Preference number: 5 (lower is better)
Translates to: GLRWRALCIEDSGAC*WRWHPCTTGGWEGG
Trigger: TCCCCCTTCCCACCCTCCAGTGGTACAAGGATGCCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTGCTCGCCAGCGGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGGGGAACCACAATGGTaGGGGCCATGGTTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHGEPQW*GPWFQV
Trigger: CACCTGAAACCATGGCCCCAACCATTGTGGTTCCCC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGGGGACCCCCATGGCTaGACATCCGATGTCCACAGT +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLGDPHG*TSDVHS
Trigger: ACTGTGGACATCGGATGTCAAGCCATGGGGGTCCCC...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGTAGCATCAACCTGCTaGTCTCGGCGCTGTACTGGC +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHVASTC*SRRCTG
Trigger: GCCAGTACAGCGCCGAGACAAGCAGGTTGATGCTAC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCCACGCAACACCCCGTaGTGCTCTGTTTCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLPRNTP*CSVSGG
Trigger: ACCCCCAGAAACAGAGCACAACGGGGTGTTGCGTGG...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCGAGCGAGGGCTGATGTaGGAAATGACCAGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCERGLM*EMTRLD
Trigger: ATCCAACCTGGTCATTTCCAACATCAGCCCTCGCTC...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACTCGGGATCCAGGTCTTaGGCCCGGAACAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHSGSRS*ARNRIL
Trigger: CAAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGA...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGTCGCCCCAGGACACGTaGAGCGTGGTGGAGGTTATT +
Preference number: 5 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRSPQDT*SVVEVI
Trigger: AATAACCTCCACCACGCTCAACGTGTCCTGGGGCGA...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGGTGATGGTCCGCGCTaGGACACGGAAGAAATAGGT +
Preference number: 5 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARGDGPR*DTEEIG
Trigger: ACCTATTTCTTCCGTGTCCAAGCGCGGACCATCACC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAGGCTGTGATATTGGCTaGGAGCTCGGGCCCGTAGGT +
Preference number: 5 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGGCDIG*ELGPVG
Trigger: ACCTACGGGCCCGAGCTCCAAGCCAATATCACAGCC...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGTTGGAGAAGGTGCTCTaGACATTGAGGTGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVELEKVL*TLRWRL
Trigger: CAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAA...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTCTGCCGACTTCTCCTaGAGGCTCACGCTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLSADFS*RLTLSV
Trigger: GACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGAGAAGTGTCATGATGTaGTATCGAAAACCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: QDRGRGRPGVHEASRERVRSVMM*YRKPES
Trigger: GCTCTCGGGTTTTCGATACAACATCATGACACTTCT...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp CCTGTTCCGGCACGGATGTCCATGTCAGTAAAATCTGGGTCGAGCTaGCAGCCTCGGCTGACACGTTCTCAGGGGCGGCTGAAGGAACTG +
Preference number: 5 (lower is better)
Translates to: PVPARMSMSVKSGSS*QPRLTRSQGRLKEL
Trigger: CAGTTCCTTCAGCCGCCCCTGAGAACGTGTCAGCCGAGGCTGTCAGCTCGACCCAGATTTTACTGACATGGACATCCGTGCCGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp GGGCTCTCCTGGAACATCCTGCAGCGTGGTCACCGCCTCTGTCTCTaGACTGAAGTCACTGTCCCCAATGTCGTTGGTGGCTTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: GLSWNILQRGHRLCL*TEVTVPNVVGGFQA
Trigger: CGCCTGAAAGCCACCAACGACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS TCA 90 bp CCACCCGGAACTCGTAAGTCACTCCTTGCCGGAGCTTATCCAGGCTaGGGGTGTAGGATGTGGCGCTCCGCGGGATGTCCTTCACAAACA +
Preference number: 5 (lower is better)
Translates to: PPGTRKSLLAGAYPG*GCRMWRSAGCPSQT
Trigger: TGTTTGTGAAGGACATCCCGCGGAGCGCCACATCCTACACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAGTTCCGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000467827.1
ENST00000476701.5
ENST00000615806.4
CDS TCA 90 bp CAGAGTCCGTGGCCTCAGATTCTGATGCATCTGCCGACTTCTCCTTaGGGCTCACGCTCTCGGTCAGCACGGCGCCGTTGTACTTGTTGC +
Preference number: 5 (lower is better)
Translates to: QSPWPQILMHLPTSP*GSRSRSARRRCTCC
Trigger: GCAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACGGACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS TCA 90 bp CAGCCCTGGATGAGGCATCAGGGGCACTGGATGCGGAGTGAGTGCTaGATGGGGACGGAGTCTCAGTTTCGCAAGTCGAAGAGCGTTCTG +
Preference number: 5 (lower is better)
Translates to: QPWMRHQGHWMRSEC*MGTESQFRKSKSVL
Trigger: CAGAACGCTCTTCGACTTGCGAAACTGAGACTCCGTCCCCATTCAGCACTCACTCCGCATCCAGTGCCCCTGATGCCTCATCCAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS TCA 90 bp CTTGCAGCAGCCCTGGATGAGGCATCAGGGGCACTGGATGCGGAGTaGGTGCTGAATGGGGACGGAGTCTCAGTTTCGCAAGTCGAAGAG +
Preference number: 5 (lower is better)
Translates to: LAAALDEASGALDAE*VLNGDGVSVSQVEE
Trigger: CTCTTCGACTTGCGAAACTGAGACTCCGTCCCCATTCAGCACTCACTCCGCATCCAGTGCCCCTGATGCCTCATCCAGGGCTGCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS GCA 90 bp CGAAGCACTGGAAGATTCCGGAGTCCTCTGGACGCAGCTTCTGGATaGGCAGGCCTCCGCTGGCGAGCACTTTGTATCGAGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: RSTGRFRSPLDAASG*AGLRWRALCIEDSG
Trigger: TCCAGAATCCTCGATACAAAGTGCTCGCCAGCGGAGGCCTGCGCATCCAGAAGCTGCGTCCAGAGGACTCCGGAATCTTCCAGTGCTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 90 bp AGGGTGGACGATGGACGTCCGATTCCACACAGTGAGCGTGGCCGATaGATTCAGGGAGCCCTCTGTGTTGGCCGCATAGCAGGTGTAGTT +
Preference number: 5 (lower is better)
Translates to: RVDDGRPIPHSERGR*IQGALCVGRIAGVV
Trigger: AACTACACCTGCTATGCGGCCAACACAGAGGGCTCCCTGAATGCATCGGCCACGCTCACTGTGTGGAATCGGACGTCCATCGTCCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCGCGCACACCCGGAATaGATAGGTACGAGCCGGAGT +
Preference number: 5 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPRAHPE*IGTSRS
Trigger: ACTCCGGCTCGTACCTATCAATTCCGGGTGTGCGCG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGTAGCATCAACCTGCTaGTCTCGGCGCTGTACTGGC +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCVASTC*SRRCTG
Trigger: GCCAGTACAGCGCCGAGACAAGCAGGTTGATGCTAC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGGTTTTTGAGCGTCTaGGCCTCAGTGCCTGACCCG +
Preference number: 5 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPGFLSV*ASVPDP
Trigger: CGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACGCGCCGTTGTACTTGTaGCAGATGTCCTCGTCTGAG +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHAPLYL*QMSSSE
Trigger: CTCAGACGAGGACATCTGCAACAAGTACAACGGCGC...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACACGGCGCCGTTGTACTaGTTGCAGATGTCCTCGTCT +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHTAPLY*LQMSSS
Trigger: AGACGAGGACATCTGCAACAAGTACAACGGCGCCGT...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGTCAGCACGGCGCCGTaGTACTTGTTGCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCVSTAP*YLLQMS
Trigger: GGACATCTGCAACAAGTACAACGGCGCCGTGCTGAC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTCTGCCGACTTCTCCTaGAGGCTCACGCTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPSADFS*RLTLSV
Trigger: GACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCATAGACTCCGGAAAGTaGCCTCCGTTCCGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCIDSGK*PPFRPE
Trigger: CTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTAT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCACCGGGCGAGAAGAAGTaGTCAACGGGGGAAATTCGC +
Preference number: 5 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSPGEKK*STGEIR
Trigger: GCGAATTTCCCCCGTTGACAACTTCTTCTCGCCCGG...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404826.7
CDS-3UTR CAA 90 bp CGCACTGAGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGCCGGGGAACTGTGGGTaGCGATTCTCATGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: RTEPREKRLLFKPQEPPRPGNCG*RFSCRS
Trigger: ACTTCTGCATGAGAATCGCAACCCACAGTTCCCCGG...CCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGAGGTACGCAGACGGGTaGCTCGTCAGGAGGATAGCT +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLRYADG*LVRRIA
Trigger: AGCTATCCTCCTGACGAGCAACCCGTCTGCGTACCT...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp CCCTCCTTCAGAAACAATCTCGCAGCTGTAGTCACCGATGTCGCCTaGCCACGTCTGGCTGATGAGAAGGGACCCGTCCTTCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: PSFRNNLAAVVTDVA*PRLADEKGPVLLHH
Trigger: GTGGTGGAGAAGGACGGGTCCCTTCTCATCAGCCAGACGTGGTCAGGCGACATCGGTGACTACAGCTGCGAGATTGTTTCTGAAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000484011.1
ENST00000615806.4
CDS TCA 90 bp ACACCCGGAATTGATAGGTACGAGCCGGAGTCAGGCCACTCACGGTaGCGCCTGTCATCTCAGGGCCAACGTTTGACAGATGCACCTTCC +
Preference number: 5 (lower is better)
Translates to: TPGIDRYEPESGHSR*RLSSQGQRLTDAPS
Trigger: GGAAGGTGCATCTGTCAAACGTTGGCCCTGAGATGACAGGCGTCACCGTGAGTGGCCTGACTCCGGCTCGTACCTATCAATTCCGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp CGCCGACAAAGACCTCCACGGGCGCGCTGGCTGGGCTCTCGCCGATaGTGTTATAGGCGGTCATTATTACTTCATAGCGCCGGTACTTCT +
Preference number: 5 (lower is better)
Translates to: RRQRPPRARWLGSRR*CYRRSLLLHSAGTS
Trigger: AGAAGTACCGGCGCTATGAAGTAATAATGACCGCCTATAACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTCTTTGTCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000481856.1
ENST00000615806.4
CDS TCA 90 bp TGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTaGGGGAGGCGCGGCGCTTTGCTCACACGAAGGAGGAGAAGCCGG +
Preference number: 5 (lower is better)
Translates to: CLNKNRLRKVASVPP*GRRGALLTRRRRSR
Trigger: CCGGCTTCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000615806.4
CDS GCA 90 bp CTTCAGGTAGCATCAACCTGCTTGTCTCGGCGCTGTACTGGCCCCTaGCCACTTCATTCACCGCGCACACCCGGAATTGATAGGTACGAG +
Preference number: 5 (lower is better)
Translates to: LQVASTCLSRRCTGP*PLHSPRTPGIDRYE
Trigger: CTCGTACCTATCAATTCCGGGTGTGCGCGGTGAATGAAGTGGGCAGGGGCCAGTACAGCGCCGAGACAAGCAGGTTGATGCTACCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTCATCGCGCATCCACTaGAACTCCAAAGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLSSRIH*NSKGQL
Trigger: GAGCTGGCCTTTGGAGTTCAAGTGGATGCGCGATGA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGGTGATGGCTATTCTGTaGCTTGGAATAATCTTGTGC +
Preference number: 5 (lower is better)
Translates to: AAGSLEEEVERDGGRPGQVMAIL*LGIILC
Trigger: GCACAAGATTATTCCAAGCAACAGAATAGCCATCAC...CTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGATGGAGATGGCATCCTaGTACCACTGGAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLMEMAS*YHWRVG
Trigger: TCCCACCCTCCAGTGGTACAAGGATGCCATCTCCAT...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTCCGCTGGCGAGCACTTaGTATCGAGGATTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPPLAST*YRGFWS
Trigger: GCTCCAGAATCCTCGATACAAAGTGCTCGCCAGCGG...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCGCGCACACCCGGAATaGATAGGTACGAGCCGGAGT +
Preference number: 5 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVRAHPE*IGTSRS
Trigger: ACTCCGGCTCGTACCTATCAATTCCGGGTGTGCGCG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTAGCTTGTATCCCTGGTaGATGCCATTGATAAACTGC +
Preference number: 5 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAASLYPW*MPLINC
Trigger: GCAGTTTATCAATGGCATCAACCAGGGATACAAGCT...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGGCCATGCCAGAAGCTaGTATCCCTGGTTGATGCCA +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCGHARS*YPWLMP
Trigger: TGGCATCAACCAGGGATACAAGCTTCTGGCATGGCC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTCCATCTCCGGCGGCGTaGAAGGCTGATATGCTGACC +
Preference number: 5 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVPSPAA*KADMLT
Trigger: GGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGG...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTTCCACGGTCACCACCTaGCTCACCCCTTGTACAGGG +
Preference number: 5 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVSTVTT*LTPCTG
Trigger: CCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTGGA...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCAGCAAATCCTCCGTaGTCCAGGGTCACAGACTCC +
Preference number: 5 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPAANPP*SRVTDS
Trigger: GGAGTCTGTGACCCTGGACAACGGAGGATTTGCTGC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGCGCCGTTGTACTTGTaGCAGATGTCCTCGTCTGAG +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLAPLYL*QMSSSE
Trigger: CTCAGACGAGGACATCTGCAACAAGTACAACGGCGC...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAGCGCCGTTGTACTTGTaGCAGATGTCCTCGTCTGAG +
Preference number: 5 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGAPLYL*QMSSSE
Trigger: CTCAGACGAGGACATCTGCAACAAGTACAACGGCGC...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AACAAGCAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCCTGAAAGCCGACTCCTaGACTAGACACTGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: NKQFWRRRPVSSCPAELTLKADS*TRHCQV
Trigger: CACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCAG...GGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCCGGGGAACTGTGGGTaGCGATTCTCATGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCPGNCG*RFSCRS
Trigger: ACTTCTGCATGAGAATCGCAACCCACAGTTCCCCGG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGAAGGTGGCCGTGCAGGAGGCCGAGGGGGTGTGGCCTGGCAGCTCTCTCTGGGACGGAAAACATGAGCTaGAAACAGAAGTGTCATGAT +
Preference number: 5 (lower is better)
Translates to: RRWPCRRPRGCGLAALSGTENMS*KQKCHD
Trigger: ATCATGACACTTCTGTTTCAAGCTCATGTTTTCCGT...CCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTGCTGGGGAGAGGGGCTaGGGCTGGACCGATTCACCC +
Preference number: 5 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLAGERG*GWTDSP
Trigger: GGGTGAATCGGTCCAGCCCAAGCCCCTCTCCCCAGC...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS GCA 90 bp TACATTCCAAGGTGGTCTCACTGGATCCAGCCACCACACTTCTGTTaGCCGGGGGAACCACAATGGTTGGGGCCATGGTTTCAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: YIPRWSHWIQPPHFC*PGEPQWLGPWFQVC
Trigger: GCACACCTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGCTGGATCCAGTGAGACCACCTTGGAATGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS GCA 90 bp GAGAGGCCTTGGATCTTGTACTCGTGCGTCGTGCTGTTCAGGGTGTaGGTGAGACGAGAGTCGTTCCTGCCGTACACTTCCCAAGAGATC +
Preference number: 5 (lower is better)
Translates to: ERPWILYSCVVLFRV*VRRESFLPYTSQEI
Trigger: GATCTCTTGGGAAGTGTACGGCAGGAACGACTCTCGTCTCACGCACACCCTGAACAGCACGACGCACGAGTACAAGATCCAAGGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGGGAGGTCTGAGGTCCTCCCAGGCCCCGGAGGTGCCAAGCCATTGCACCAGTTGCTTGGAATAATCTaGTGCCCTTCTCTAAACCAA +
Preference number: 5 (lower is better)
Translates to: LGRSEVLPGPGGAKPLHQLLGII*CPSLNQ
Trigger: TTGGTTTAGAGAAGGGCACAAGATTATTCCAAGCAA...CTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCTGTGTGTGATGGCTATTCTGTaGCTTGGAATAATCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LETPSRVLVSRGVDRVLCVMAIL*LGIILC
Trigger: GCACAAGATTATTCCAAGCAACAGAATAGCCATCAC...ACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGTCTCAGGGCCAACGTTaGACAGATGCACCTTCCATG +
Preference number: 5 (lower is better)
Translates to: AQGKTFALQTPGAAEDVLSQGQR*TDAPSM
Trigger: CATGGAAGGTGCATCTGTCAAACGTTGGCCCTGAGA...CAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGGCCATGCCAGAAGCTaGTATCCCTGGTTGATGCCA +
Preference number: 5 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPGHARS*YPWLMP
Trigger: TGGCATCAACCAGGGATACAAGCTTCTGGCATGGCC...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCAGTTCAGAGGCGGACTaGGTGACCAGGACATCTCTA +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCSSEAD*VTRTSL
Trigger: TAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAGGACAGAGGGAGGGGACGGCCTGGTGTGCACGAGGCGAGTCGGGAGCGTGTGACTTCAGCTCAGTTATaGGAGTTGATTGTCTTAACA +
Preference number: 5 (lower is better)
Translates to: QDRGRGRPGVHEASRERVTSAQL*ELIVLT
Trigger: TGTTAAGACAATCAACTCCAATAACTGAGCTGAAGT...CACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCCCCAGGGAAAAACGTTaGCTCTTCAAACCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCPREKR*LFKPQE
Trigger: CTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGG...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GACCCGGGGCACACACGCCAGTGGGCACCAGCAGTGCTCCCGTTCCATCCAGACTATTTGCAGACACTGTaGCTTTTCATCTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: DPGHTRQWAPAVLPFHPDYLQTL*LFIFPM
Trigger: CATGGGAAAGATGAAAAGCAACAGTGTCTGCAAATA...GTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGATCAGATACTGCTCAGTaGTCCCCTACCCTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGSDTAQ*SPTLRS
Trigger: TGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGA...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCTCAGATACTGCTCAGTaGTCCCCTACCCTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCSDTAQ*SPTLRS
Trigger: TGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGA...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCATGCAGAAGTGGCTTaGGGCAGAGCATCTAGGATT +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHHAEVA*GRASRI
Trigger: AATCCTAGATGCTCTGCCCAAAGCCACTTCTGCATG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp GGCCTTGGATCTTGTACTCGTGCGTCGTGCTGTTCAGGGTGTGCGTaGGACGAGAGTCGTTCCTGCCGTACACTTCCCAAGAGATCTGAT +
Preference number: 5 (lower is better)
Translates to: GLGSCTRASCCSGCA*DESRSCRTLPKRSD
Trigger: ATCAGATCTCTTGGGAAGTGTACGGCAGGAACGACTCTCGTCTCACGCACACCCTGAACAGCACGACGCACGAGTACAAGATCCAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACCTTCCATGGAGAGTaGTTTTCAGAGAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGTFHGE*FSESST
Trigger: CGTGGAGCTCTCTGAAAACAACTCTCCATGGAAGGT...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGAGCTTGTATCCCTGGTaGATGCCATTGATAAACTGC +
Preference number: 5 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVESLYPW*MPLINC
Trigger: GCAGTTTATCAATGGCATCAACCAGGGATACAAGCT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTCAGCCCTGCCTCGTCTaGGCGGACAGCCTGAAGATG +
Preference number: 5 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLQPCLV*ADSLKM
Trigger: CATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTG...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAACGGCACCTGCCCGTGTAAATCTTGTAGCCTaGGATGTTCCCATTCTGGCT +
Preference number: 5 (lower is better)
Translates to: YCSVVPYPQVTGGTAPARVNLVA*DVPILA
Trigger: AGCCAGAATGGGAACATCCAAGGCTACAAGATTTAC...ACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTTCCGTGACCACATCCTaGCAGGGTGGGGCCGAAGCA +
Preference number: 5 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLSVTTS*QGGAEA
Trigger: TGCTTCGGCCCCACCCTGCAAGGATGTGGTCACGGA...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp AGTCAGGCCACTCACGGTGACGCCTGTCATCTCAGGGCCAACGTTTaGCAGATGCACCTTCCATGGAGAGTTGTTTTCAGAGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SQATHGDACHLRANV*QMHLPWRVVFRELH
Trigger: GTGGAGCTCTCTGAAAACAACTCTCCATGGAAGGTGCATCTGTCAAACGTTGGCCCTGAGATGACAGGCGTCACCGTGAGTGGCCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp TCCATATATGTAGTTATGCAGCATGATGCGCTGGCCTCTGACCGCTaGCTTGGGACACAAGCCGGGCGTGACACTTGTGAAGTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SIYVVMQHDALASDR*LGTQAGRDTCEVAV
Trigger: GACTGCCACTTCACAAGTGTCACGCCCGGCTTGTGTCCCAAGTCAGCGGTCAGAGGCCAGCGCATCATGCTGCATAACTACATATATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484011.1
CDS GCA 90 bp ATCCCCTTTCCTGTGCTGCAGTTCTTATACTTCTTATTCTGCCCGTaGAGGACGAGGGCGAACACCACCAGCAGGATGACGATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: IPFPVLQFLYFLFCP*RTRANTTSRMTIRL
Trigger: CAGCCTGATCGTCATCCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS GCA 90 bp GTGGAGATCCCCTTTCCTGTGCTGCAGTTCTTATACTTCTTATTCTaGCCGTGCAGGACGAGGGCGAACACCACCAGCAGGATGACGATC +
Preference number: 5 (lower is better)
Translates to: VEIPFPVLQFLYFLF*PCRTRANTTSRMTI
Trigger: GATCGTCATCCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAAATCGCTGCACGTCCTaGAGAAACTGTTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGNRCTS*RNCFPL
Trigger: CAGAGGAAAACAGTTTCTCAAGGACGTGCAGCGATT...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCAATCGCTGCACGTCCTaGAGAAACTGTTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCNRCTS*RNCFPL
Trigger: CAGAGGAAAACAGTTTCTCAAGGACGTGCAGCGATT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTTCTAAACCAAGTCACTaGAGGTCTGGGGTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPSKPSH*RSGVAG
Trigger: ACCAGCTACCCCAGACCTCAAGTGACTTGGTTTAGA...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCCAGCCCCGACGGCGTaGAAGGCCTGCATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRPAPTA*KACICS
Trigger: GCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCTGG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCAGCCCTGCCTCGTCTaGGCGGACAGCCTGAAGATG +
Preference number: 5 (lower is better)
Translates to: PEDKELGTVASQMPHCSGQPCLV*ADSLKM
Trigger: CATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTGGGAGGCGCGGCGCTTaGCTCACACGAAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: WSPFIASLPRNSSAHILAGRRGA*LTRRRR
Trigger: TCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCCC...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CGCTGGTTCTCTGGAAGAGGAGGTAGAAAGAGACGGGGGCCGGCCGGGGCAGCTACTTCAGCTCAGTTATaGGAGTTGATTGTCTTAACA +
Preference number: 5 (lower is better)
Translates to: RWFSGRGGRKRRGPAGAATSAQL*ELIVLT
Trigger: TGTTAAGACAATCAACTCCAATAACTGAGCTGAAGT...AGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 90 bp AATCAAGGCCCAGCCAACTGTGCTTTCTCCCTGAGGATGGCTGTGTaGAGGGCTTCTGGATCTAATTTGTCCATGCTGGCATTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: NQGPANCAFSLRMAV*RASGSNLSMLAFGE
Trigger: CTCCCCAAATGCCAGCATGGACAAATTAGATCCAGAAGCCCTGCACACAGCCATCCTCAGGGAGAAAGCACAGTTGGCTGGGCCTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS-3UTR CAA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCGCGGACGTCGGGTaGCTGATGGTGAGGCGTCTT +
Preference number: 5 (lower is better)
Translates to: WSPFIASLPRNSSAHILASADVG*LMVRRL
Trigger: AAGACGCCTCACCATCAGCAACCCGACGTCCGCGGA...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTGCGTTACCTTCCATGGAGAGTaGTTTTCAGAGAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: REKRLLFKPQEPPRMSCVTFHGE*FSESST
Trigger: CGTGGAGCTCTCTGAAAACAACTCTCCATGGAAGGT...AACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCAGCTTGTATCCCTGGTaGATGCCATTGATAAACTGC +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCSLYPW*MPLINC
Trigger: GCAGTTTATCAATGGCATCAACCAGGGATACAAGCT...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGGGCTCCTCCGGAGGTaGCCACACTATCCGCACGGA +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRGLLRR*PHYPHG
Trigger: TCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AGCCCAGGGAAAAACGTTTGCTCTTCAAACCCCAGGAGCCGCCGAGGATGTCCTAAAGCTATAGGGTTTTaGAGCGTCTTGGCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SPGKNVCSSNPRSRRGCPKAIGF*SVLASV
Trigger: CACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTT...AGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CATCCCTGCCTGGCCGTCAGGAACCTGAAAGCCGACTCCTTGACTAGACACTGCGTAAATCTTGTAGCCTaGGATGTTCCCATTCTGGCT +
Preference number: 5 (lower is better)
Translates to: HPCLAVRNLKADSLTRHCVNLVA*DVPILA
Trigger: AGCCAGAATGGGAACATCCAAGGCTACAAGATTTAC...GCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCCATCTCCGGCGGCGTaGAAGGCTGATATGCTGACC +
Preference number: 5 (lower is better)
Translates to: PEDKELGTVASQMPHCSGPSPAA*KADMLT
Trigger: GGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TGTGCACGAGGCGAGTCGGGAGCGTGTGTTCTCAGAGCTGTTTTGCTTTATTTGGGTGATGGTCCGCGCTaGGACACGGAAGAAATAGGT +
Preference number: 5 (lower is better)
Translates to: CARGESGACVLRAVLLYLGDGPR*DTEEIG
Trigger: ACCTATTTCTTCCGTGTCCAAGCGCGGACCATCACC...CAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGTCAGCACGGCGCCGTaGTACTTGTTGCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCVSTAP*YLLQMS
Trigger: GGACATCTGCAACAAGTACAACGGCGCCGTGCTGAC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CAATTCTGGAGACGCCGTCCCGTGTCCTCGTGTCCCGCGGAGTTGACCGTGTGCACTTCAGCTCAGTTATaGGAGTTGATTGTCTTAACA +
Preference number: 5 (lower is better)
Translates to: QFWRRRPVSSCPAELTVCTSAQL*ELIVLT
Trigger: TGTTAAGACAATCAACTCCAATAACTGAGCTGAAGT...GCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAACACGGCCTCCGAAGACCTGTACAGAGTGAGCCACCTCCCGGGGCTGTGGAGACGGAAAACATGAGCTaGAAACAGAAGTGTCATGAT +
Preference number: 5 (lower is better)
Translates to: KHGLRRPVQSEPPPGAVETENMS*KQKCHD
Trigger: ATCATGACACTTCTGTTTCAAGCTCATGTTTTCCGT...CTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACTTTTTGGCTACAGCATaGAGTGAAGTGCGCCTTATA +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHFLATA*SEVRLI
Trigger: TATAAGGCGCACTTCACTCAATGCTGTAGCCAAAAA...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp GGATCCTCATTCAAGGCAGGAGGCAAAATGCATTGCATGTTAAGATaGCGAAGAAAGCCCGTGTTGCAGGCTGATCCCAGGAAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GSSFKAGGKMHCMLR*RRKPVLQADPRKGW
Trigger: CCACCCCTTCCTGGGATCAGCCTGCAACACGGGCTTTCTTCGTCATCTTAACATGCAATGCATTTTGCCTCCTGCCTTGAATGAGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466611.1
CDS-3UTR CAA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGGTAGCATCAACCTGCTaGTCTCGGCGCTGTACTGGC +
Preference number: 5 (lower is better)
Translates to: PEDKELGTVASQMPHCSGVASTC*SRRCTG
Trigger: GCCAGTACAGCGCCGAGACAAGCAGGTTGATGCTAC...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACGTGTCCCAGCGGGCAGGCTCAGCTCATGAGTTTCCACGTTGTCCTCACCCCAACAATGTTCACTaGCTTCATTCGAAATCTGTA +
Preference number: 5 (lower is better)
Translates to: GDVSQRAGSAHEFPRCPHPNNVH*LHSKSV
Trigger: TACAGATTTCGAATGAAGCAAGTGAACATTGTTGGG...GTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCTCGGGATCCAGGTCTTaGGCCCGGAACAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPSGSRS*ARNRIL
Trigger: CAAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGA...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCAGCCCTGCCTCGTCTaGGCGGACAGCCTGAAGATG +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRQPCLV*ADSLKM
Trigger: CATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTGGGTTTTTGAGCGTCTaGGCCTCAGTGCCTGACCCG +
Preference number: 5 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPGFLSV*ASVPDP
Trigger: CGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCC...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAGACTCAGCCACTGCTGTCATGAGGCATCCGCAAGGCATGACTTTCAGCACGGTAAATCTTGTAGCCTaGGATGTTCCCATTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GDSATAVMRHPQGMTFSTVNLVA*DVPILA
Trigger: AGCCAGAATGGGAACATCCAAGGCTACAAGATTTAC...CGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTTCCACGGTCACCACCTaGCTCACCCCTTGTACAGGG +
Preference number: 5 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPSTVTT*LTPCTG
Trigger: CCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTGGA...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCTCGTAAGTCACTCCTaGCCGGAGCTTATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCLVSHS*PELIQA
Trigger: AGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCAGGTCACTGGGGGAGTTCTCAGAGCTGTTTaGCTTTATTTGCAGACACTG +
Preference number: 5 (lower is better)
Translates to: VALVRYCSVVPYPQVTGGVLRAV*LYLQTL
Trigger: CAGTGTCTGCAAATAAAGCAAAACAGCTCTGAGAAC...TCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCATTTTTGGCTACAGCATaGAGTGAAGTGCGCCTTATA +
Preference number: 5 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSFLATA*SEVRLI
Trigger: TATAAGGCGCACTTCACTCAATGCTGTAGCCAAAAA...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp GAAGGGGTGGGAAGCCGGGCTGACAAGCTGTCAGAAACACGCTTATaGGAAAGACAAGCAGCTTATGAGAAAGACAAGCAGCACATGAGG +
Preference number: 5 (lower is better)
Translates to: EGVGSRADKLSETRL*ERQAAYEKDKQHMR
Trigger: CCTCATGTGCTGCTTGTCTTTCTCATAAGCTGCTTGTCTTTCTCATAAGCGTGTTTCTGACAGCTTGTCAGCCCGGCTTCCCACCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466611.1
CDS-3UTR CAA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCATTGCTTGGAATAATCTaGTGCCCTTCTCTAAACCAA +
Preference number: 5 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSLLGII*CPSLNQ
Trigger: TTGGTTTAGAGAAGGGCACAAGATTATTCCAAGCAA...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACTCCGCGGACGTCGGGTaGCTGATGGTGAGGCGTCTT +
Preference number: 5 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNSADVG*LMVRRL
Trigger: AAGACGCCTCACCATCAGCAACCCGACGTCCGCGGA...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGATGGAGATGGCATCCTaGTACCACTGGAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PEDKELGTVASQMPHCSGMEMAS*YHWRVG
Trigger: TCCCACCCTCCAGTGGTACAAGGATGCCATCTCCAT...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATCAGAGTGCACAGAAAGCAGCGCTGGCCATGGTCTCCATTTATCGCTTCTCTTTCTCAGGGCCAACGTTaGACAGATGCACCTTCCATG +
Preference number: 5 (lower is better)
Translates to: IRVHRKQRWPWSPFIASLSQGQR*TDAPSM
Trigger: CATGGAAGGTGCATCTGTCAAACGTTGGCCCTGAGA...AAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCCCAGACCGGCCCCGTaGTACGCCGCCACCTGTATC +
Preference number: 5 (lower is better)
Translates to: KCHDVVSKTREQQTYLESPRPAP*YAATCI
Trigger: GATACAGGTGGCGGCGTACAACGGGGCCGGTCTGGG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GACTGGCTCCTGGGTGGCACTGGTCAGATACTGCTCAGTTGTCCCCTACCCTCACCCAACAATGTTCACTaGCTTCATTCGAAATCTGTA +
Preference number: 5 (lower is better)
Translates to: DWLLGGTGQILLSCPLPSPNNVH*LHSKSV
Trigger: TACAGATTTCGAATGAAGCAAGTGAACATTGTTGGG...TGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTCCAGCCCCGACGGCGTaGAAGGCCTGCATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KCHDVVSKTREQQTYLESPAPTA*KACICS
Trigger: GCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCTGG...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGGCCCGGCTGTGATATaGGCTTGGAGCTCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRGPAVI*AWSSGP
Trigger: CGGGCCCGAGCTCCAAGCCAATATCACAGCCGGGCC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTAGTTCAGAGGCGGACTaGGTGACCAGGACATCTCTA +
Preference number: 5 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCSSEAD*VTRTSL
Trigger: TAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACT...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTCTGGTCCCGTTCTTCTaGGAGAAGGTGCTCTTGACA +
Preference number: 5 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCLVPFF*EKVLLT
Trigger: TGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAG...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGACGGCGCCGTTGTACTaGTTGCAGATGTCCTCGTCT +
Preference number: 5 (lower is better)
Translates to: PEDKELGTVASQMPHCSGTAPLY*LQMSSS
Trigger: AGACGAGGACATCTGCAACAAGTACAACGGCGCCGT...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTTCATCGCGCATCCACTaGAACTCCAAAGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPSSRIH*NSKGQL
Trigger: GAGCTGGCCTTTGGAGTTCAAGTGGATGCGCGATGA...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACAGGTGATGGCGGGTTaGGGAGCCCCGGACACCTCA +
Preference number: 5 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRQVMAG*GAPDTS
Trigger: TGAGGTGTCCGGGGCTCCCAAACCCGCCATCACCTG...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCCCAGACCGGCCCCGTaGTACGCCGCCACCTGTATC +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWPRPAP*YAATCI
Trigger: GATACAGGTGGCGGCGTACAACGGGGCCGGTCTGGG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTTTGGAAATGACCAGGTaGGATGGGGCACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPLEMTR*DGAPGR
Trigger: CCTTCCTGGTGCCCCATCCAACCTGGTCATTTCCAA...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTCGGGATCCAGGTCTTaGGCCCGGAACAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRSGSRS*ARNRIL
Trigger: CAAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCAGTTCAGAGGCGGACTaGGTGACCAGGACATCTCTA +
Preference number: 5 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPSSEAD*VTRTSL
Trigger: TAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACT...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCTGAAAGCCGACTCCTaGACTAGACACTGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: PEDKELGTVASQMPHCSGLKADS*TRHCQV
Trigger: CACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCAG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TGGTCTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTCTGCTGTTCACCGTCTaGAAGCTGCTTTGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: WSPFIASLPRNSSAHILALLFTV*KLLWAV
Trigger: CACAGCCCAAAGCAGCTTCAAGACGGTGAACAGCAG...AGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS TCA 90 bp CCCCATGGCTTGACATCCGATGTCCACAGTTTCTTCTACTTCAGCTaGAATCCGACTCTCGGGCTCAGCAGTAAAATATGGTGGCTCTAT +
Preference number: 5 (lower is better)
Translates to: PHGLTSDVHSFFYFS*NPTLGLSSKIWWLY
Trigger: ATAGAGCCACCATATTTTACTGCTGAGCCCGAGAGTCGGATTTCAGCTGAAGTAGAAGAAACTGTGGACATCGGATGTCAAGCCATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAGGGCTCCTCCGGAGGTaGCCACACTATCCGCACGGA +
Preference number: 5 (lower is better)
Translates to: INKKAPGDSKDAFISCDIGLLRR*PHYPHG
Trigger: TCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCC...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CTCCATTTATCGCTTCTCTTCCAAGAAATTCCAGTGCTCACATCCTGGCTTCCCTTCTCAAATGCCGCATaGCTCTGGGAGGCCAAAATC +
Preference number: 5 (lower is better)
Translates to: LHLSLLFQEIPVLTSWLPFSNAA*LWEAKI
Trigger: GATTTTGGCCTCCCAGAGCAATGCGGCATTTGAGAA...GGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCCCCGGCATCACTGGTaGTGGTGGCGAGGATCACCA +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWPRHHW*WWRGSP
Trigger: TGGTGATCCTCGCCACCACAACCAGTGATGCCGGGG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTCCGCGGACGTCGGGTaGCTGATGGTGAGGCGTCTT +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWSADVG*LMVRRL
Trigger: AAGACGCCTCACCATCAGCAACCCGACGTCCGCGGA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TGTGCGATAATTAATTTCTGGGAACTGTCTTCCAGAGCTGGTTTACTTTCATTATCCGCGGACGTCGGGTaGCTGATGGTGAGGCGTCTT +
Preference number: 5 (lower is better)
Translates to: CAIINFWELSSRAGLLSLSADVG*LMVRRL
Trigger: AAGACGCCTCACCATCAGCAACCCGACGTCCGCGGA...TAATGAAAGTAAACCAGCTCTGGAAGACAGTTCCCAGAAATTAATTATCGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CAA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAGGGGACCCCCATGGCTaGACATCCGATGTCCACAGT +
Preference number: 5 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRGDPHG*TSDVHS
Trigger: ACTGTGGACATCGGATGTCAAGCCATGGGGGTCCCC...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTCTCAGGGCCAACGTTaGACAGATGCACCTTCCATG +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRSQGQR*TDAPSM
Trigger: CATGGAAGGTGCATCTGTCAAACGTTGGCCCTGAGA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCGAGCGAGGGCTGATGTaGGAAATGACCAGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRERGLM*EMTRLD
Trigger: ATCCAACCTGGTCATTTCCAACATCAGCCCTCGCTC...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTTCCACGGTCACCACCTaGCTCACCCCTTGTACAGGG +
Preference number: 5 (lower is better)
Translates to: KCHDVVSKTREQQTYLESSTVTT*LTPCTG
Trigger: CCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTGGA...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACCTCGTAAGTCACTCCTaGCCGGAGCTTATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNLVSHS*PELIQA
Trigger: AGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAG...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCTGGTCCCGTTCTTCTaGGAGAAGGTGCTCTTGACA +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRLVPFF*EKVLLT
Trigger: TGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGCAGAAACAGATGAAGTaGGGACAAAACGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: PEDKELGTVASQMPHCSGQKQMK*GQNALS
Trigger: GCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTG...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TACGAACCATTAGGCAAACATCATGCTTCAGCCCAGTCACAGTTAGATACAAACCTGCTGTTCACCGTCTaGAAGCTGCTTTGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: YEPLGKHHASAQSQLDTNLLFTV*KLLWAV
Trigger: CACAGCCCAAAGCAGCTTCAAGACGGTGAACAGCAG...GTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp CCTGAAGATAAGGAGTTAGGAACTGTTGCTTCTCAAATGCCGCATTGCTCTGGGTATACAAAACTCTCCTaGGTCTCCTGGGGCCATACT +
Preference number: 5 (lower is better)
Translates to: PEDKELGTVASQMPHCSGYTKLS*VSWGHT
Trigger: AGTATGGCCCCAGGAGACCAAGGAGAGTTTTGTATA...CCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATATGGAGCAACATCATCTaGCGCCAGCGCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: INKKAPGDSKDAFISCDIWSNII*RQRPEQ
Trigger: TTGCTCCGGGCGCTGGCGCAAGATGATGTTGCTCCA...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389531.7
ENST00000404826.7
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCTCTAAACCAAGTCACTaGAGGTCTGGGGTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRSKPSH*RSGVAG
Trigger: ACCAGCTACCCCAGACCTCAAGTGACTTGGTTTAGA...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTGTGATGGCTATTCTGTaGCTTGGAATAATCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCVMAIL*LGIILC
Trigger: GCACAAGATTATTCCAAGCAACAGAATAGCCATCAC...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GGAACTGTCTTCCAGAGCTGGTTTACTTTCATTATAATTGTGTTGAATGTGGATGCCACCACACTTCTGTaGCCCGGGGGAACCACAATG +
Preference number: 5 (lower is better)
Translates to: GTVFQSWFTFIIIVLNVDATTLL*PGGTTM
Trigger: CATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGC...ATCCACATTCAACACAATTATAATGAAAGTAAACCAGCTCTGGAAGACAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CAA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAGGGGACCCCCATGGCTaGACATCCGATGTCCACAGT +
Preference number: 5 (lower is better)
Translates to: INKKAPGDSKDAFISCDIGDPHG*TSDVHS
Trigger: ACTGTGGACATCGGATGTCAAGCCATGGGGGTCCCC...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTTCGCCCCAGGACACGTaGAGCGTGGTGGAGGTTATT +
Preference number: 5 (lower is better)
Translates to: KCHDVVSKTREQQTYLESSPQDT*SVVEVI
Trigger: AATAACCTCCACCACGCTCAACGTGTCCTGGGGCGA...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS GCA 90 bp CTATTTTGTTTCTGCAGAAGAGTCAGTGTCGGATGCTATCTGAGATaGTGGCAACACCACTTAGAGGCTCCCGCATTACCTATGATGAAA +
Preference number: 5 (lower is better)
Translates to: LFCFCRRVSVGCYLR*WQHHLEAPALPMMK
Trigger: TTTCATCATAGGTAATGCGGGAGCCTCTAAGTGGTGTTGCCAGCATCTCAGATAGCATCCGACACTGACTCTTCTGCAGAAACAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478527.1
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCAAAGCTATAGGGTTTTaGAGCGTCTTGGCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRKAIGF*SVLASV
Trigger: CACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTT...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTTTGGAGAAGGTGCTCTaGACATTGAGGTGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: KCHDVVSKTREQQTYLESLEKVL*TLRWRL
Trigger: CAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAA...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAACGGCGCCGTTGTACTaGTTGCAGATGTCCTCGTCT +
Preference number: 5 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRTAPLY*LQMSSS
Trigger: AGACGAGGACATCTGCAACAAGTACAACGGCGCCGT...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCAGAAACAGATGAAGTaGGGACAAAACGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: NTLVNNARFLRNKQFWRRQKQMK*GQNALS
Trigger: GCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTG...GCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGACGCCGTCCCGTGTTATTTGCAGACACTGTaGCTTTTCATCTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: LTMHASYVTSNSGDAVPCYLQTL*LFIFPM
Trigger: CATGGGAAAGATGAAAAGCAACAGTGTCTGCAAATA...ACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATTATAATTGTGTTGAATGTGGATAAGATAGCTTGGCATGCCTCCTATATTGACGGGGAACCACAATGGTaGGGGCCATGGTTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: IIIVLNVDKIAWHASYIDGEPQW*GPWFQV
Trigger: CACCTGAAACCATGGCCCCAACCATTGTGGTTCCCC...GTCAATATAGGAGGCATGCCAAGCTATCTTATCCACATTCAACACAATTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGATCTCCCCTCCTTCATaGCTGGCGAAGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWISPPS*LAKHWK
Trigger: CTTCCAGTGCTTCGCCAGCAATGAAGGAGGGGAGAT...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCTCGTAAGTCACTCCTaGCCGGAGCTTATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWLVSHS*PELIQA
Trigger: AGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTTGGAGAAGGTGCTCTaGACATTGAGGTGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWLEKVL*TLRWRL
Trigger: CAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCGTCTTGAAGCTGCTTaGGGCTGTGAGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWRLEAA*GCELSM
Trigger: CATGCTGAGCTCACAGCCCAAAGCAGCTTCAAGACG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTTTGCTTGGAATAATCTaGTGCCCTTCTCTAAACCAA +
Preference number: 5 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPLLGII*CPSLNQ
Trigger: TTGGTTTAGAGAAGGGCACAAGATTATTCCAAGCAA...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGAACCTTCCATGGAGAGTaGTTTTCAGAGAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRTFHGE*FSESST
Trigger: CGTGGAGCTCTCTGAAAACAACTCTCCATGGAAGGT...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp GAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTCCCAACAATGTTCACTaGCTTCATTCGAAATCTGTA +
Preference number: 5 (lower is better)
Translates to: ELIVLTKIDSGKLPPFRPPNNVH*LHSKSV
Trigger: TACAGATTTCGAATGAAGCAAGTGAACATTGTTGGG...AGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGCATGCAGAAGTGGCTTaGGGCAGAGCATCTAGGATT +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWHAEVA*GRASRI
Trigger: AATCCTAGATGCTCTGCCCAAAGCCACTTCTGCATG...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGTTCTCAAATGCCGCATaGCTCTGGGAGGCCAAAATC +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWFSNAA*LWEAKI
Trigger: GATTTTGGCCTCCCAGAGCAATGCGGCATTTGAGAA...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAAATCGCTGCACGTCCTaGAGAAACTGTTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: INKKAPGDSKDAFISCDINRCTS*RNCFPL
Trigger: CAGAGGAAAACAGTTTCTCAAGGACGTGCAGCGATT...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAAAAGCTATAGGGTTTTaGAGCGTCTTGGCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: INKKAPGDSKDAFISCDIKAIGF*SVLASV
Trigger: CACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTT...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp AAGTGTCATGATGTTGTATCGAAAACCCGAGAGCAACAAACATATCTCGAATCTGTTCTCAGAGCTGTTTaGCTTTATTTGCAGACACTG +
Preference number: 5 (lower is better)
Translates to: KCHDVVSKTREQQTYLESVLRAV*LYLQTL
Trigger: CAGTGTCTGCAAATAAAGCAAAACAGCTCTGAGAAC...AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ATTAATAAAAAGGCACCTGGAGACAGCAAAGACGCATTCATTTCATGTGACATAAGAAGTGTCATGATGTaGTATCGAAAACCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: INKKAPGDSKDAFISCDIRSVMM*YRKPES
Trigger: GCTCTCGGGTTTTCGATACAACATCATGACACTTCT...TATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ACTTTCATTATAATTGTGTTGAATGTGGATAAGATAGCTTGGCATGCCTCCTATGAGGCATGGCCAAGTTaGTCAAGTATTAAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TFIIIVLNVDKIAWHASYEAWPS*SSIKVV
Trigger: CACCACCTTAATACTTGACAAACTTGGCCATGCCTC...ATAGGAGGCATGCCAAGCTATCTTATCCACATTCAACACAATTATAATGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS-3UTR CAA 90 bp AAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGAGATATTTGCAGACACTGTaGCTTTTCATCTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: KNTLVNNARFLRNKQFWRYLQTL*LFIFPM
Trigger: CATGGGAAAGATGAAAAGCAACAGTGTCTGCAAATA...TCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp TTTAAAAATACTCTGGTTAACAATGCACGCTTCCTACGTAACAAGCAATTCTGGGTTCTCAGAGCTGTTTaGCTTTATTTGCAGACACTG +
Preference number: 5 (lower is better)
Translates to: FKNTLVNNARFLRNKQFWVLRAV*LYLQTL
Trigger: CAGTGTCTGCAAATAAAGCAAAACAGCTCTGAGAAC...CCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS-3UTR CAA 90 bp ACTTTCTGTGCGATAATTAATTTCTGGGAACTGTCTTCCAGAGCTGGTTTACTTGGCATGCCTCCTATATaGACTGTATCTTTAAAACAA +
Preference number: 5 (lower is better)
Translates to: TFCAIINFWELSSRAGLLGMPPI*TVSLKQ
Trigger: TTGTTTTAAAGATACAGTCAATATAGGAGGCATGCC...AAGTAAACCAGCTCTGGAAGACAGTTCCCAGAAATTAATTATCGCACAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS GCA 72 bp CCGCCCGCGCTCTGCGTGGTGATGACCGGGTGCAGCTaGGCGCCCGCCTCGGAGCCCGCCACCGCCTCGTAC +
Preference number: 6 (lower is better)
Translates to: PPALCVVMTGCS*APASEPATASY
Trigger: GTACGAGGCGGTGGCGGGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCACGCAGAGCGCGGGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000615806.4
CDS CCA 72 bp CGGATGGGGGAGGCCCCGTCGCTGCCCGGGACCCACTaGAGCCGGAGGCTGCGTGCGGTCACTTCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: RMGEAPSLPGTH*SRRLRAVTSAW
Trigger: CCAGGCAGAAGTGACCGCACGCAGCCTCCGGCTCCAGTGGGTCCCGGGCAGCGACGGGGCCTCCCCCATCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp CGCGGCGCTTTGCTCACACGAAGGAGGAGAAGCCGGTaGGCGGAGTTCGCGCGCCGGGGCCAGCGGGGGTGT +
Preference number: 6 (lower is better)
Translates to: RGALLTRRRRSR*AEFARRGQRGC
Trigger: ACACCCCCGCTGGCCCCGGCGCGCGAACTCCGCTCACCGGCTTCTCCTCCTTCGTGTGAGCAAAGCGCCGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000615806.4
CDS CAA 72 bp GCGGCGCGGGCCGGGGACGAGCCGGGCGAGAAGAAGTaGTCAACGGGGGAAATTCGCGTCCGGCGCTCACGC +
Preference number: 6 (lower is better)
Translates to: AARAGDEPGEKK*STGEIRVRRSR
Trigger: GCGTGAGCGCCGGACGCGAATTTCCCCCGTTGACAACTTCTTCTCGCCCGGCTCGTCCCCGGCCCGCGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404826.7
CDS GCA 72 bp GTCGCTGCCCGGGACCCACTGGAGCCGGAGGCTGCGTaGGGTCACTTCTGCCTGGGGCACCAGGAGCTCTCT +
Preference number: 6 (lower is better)
Translates to: VAARDPLEPEAA*GHFCLGHQELS
Trigger: AGAGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCAGCCTCCGGCTCCAGTGGGTCCCGGGCAGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp GGTATCGACACAGCACGAGGGTTATCAGGAGGCGGGTaGCAGGAGGGACCGCCGTGGCATGGGGCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: GIDTARGLSGGG*QEGPPWHGAGP
Trigger: GGGGCCTGCCCCATGCCACGGCGGTCCCTCCTGGCACCCGCCTCCTGATAACCCTCGTGCTGTGTCGATACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS CCA 72 bp AAAAGCGCTCCCCGGCAGCGCCGCCTCGCAGACGTATaGCCCGGTGTCCGCGGACGTCGGGTTGCTGATGGT +
Preference number: 6 (lower is better)
Translates to: KSAPRQRRLADV*PGVRGRRVADG
Trigger: ACCATCAGCAACCCGACGTCCGCGGACACCGGGCCATACGTCTGCGAGGCGGCGCTGCCGGGGAGCGCTTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS CCA 72 bp GGGTTATCAGGAGGCGGGTGCCAGGAGGGACCGCCGTaGCATGGGGCAGGCCCCCTTCGTGAATCAAGGCCC +
Preference number: 6 (lower is better)
Translates to: GLSGGGCQEGPP*HGAGPLRESRP
Trigger: GGGCCTTGATTCACGAAGGGGGCCTGCCCCATGCCACGGCGGTCCCTCCTGGCACCCGCCTCCTGATAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS GCA 72 bp AGCACGAACTTGCGCAGGCCTGCCAGCAGGGCCGACTaGGTGTGGTTCCCTCGCACGATGTGGCTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: STNLRRPASRAD*VWFPRTMWLLG
Trigger: GCCCAGGAGCCACATCGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTCGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS CCA 72 bp AACTTGCGCAGGCCTGCCAGCAGGGCCGACTGCGTGTaGTTCCCTCGCACGATGTGGCTCCTGGGCTCGGGA +
Preference number: 6 (lower is better)
Translates to: NLRRPASRADCV*FPRTMWLLGSG
Trigger: TCCCGAGCCCAGGAGCCACATCGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS CAA 90 bp AGCGCCGCCTCGCAGACGTATGGCCCGGTGTCCGCGGACGTCGGGTaGCTGATGGTGAGGCGTCTTCCAAAGCTGTGGAGGCCACTGGTG +
Preference number: 6 (lower is better)
Translates to: SAASQTYGPVSADVG*LMVRRLPKLWRPLV
Trigger: CACCAGTGGCCTCCACAGCTTTGGAAGACGCCTCACCATCAGCAACCCGACGTCCGCGGACACCGGGCCATACGTCTGCGAGGCGGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS TCA 72 bp GCACTCCCTGCAAGGTGTACTCGGTCACTGCCCTGCTaGAGACGCCCAGACCGGCCCCGTTGTACGCCGCCA +
Preference number: 6 (lower is better)
Translates to: ALPARCTRSLPC*RRPDRPRCTPP
Trigger: TGGCGGCGTACAACGGGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGACCGAGTACACCTTGCAGGGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 72 bp AGATGTATGCGGACTCCGGGGCCAGGTCGGTGGCTGTaGACTGCCTCACTGTGGCGCCGACCTCCACGGTGG +
Preference number: 6 (lower is better)
Translates to: RCMRTPGPGRWL*TASLWRRPPRW
Trigger: CCACCGTGGAGGTCGGCGCCACAGTGAGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATACATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp CGCGGTGGGCACTCCCTGCAAGGTGTACTCGGTCACTaGCCTGCTGAAGACGCCCAGACCGGCCCCGTTGTA +
Preference number: 6 (lower is better)
Translates to: RGGHSLQGVLGH*PAEDAQTGPVV
Trigger: TACAACGGGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGACCGAGTACACCTTGCAGGGAGTGCCCACCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp CACCTGGAGCTCGTAGAGCACGAACTTGCGCAGGCCTaGCAGCAGGGCCGACTGCGTGTGGTTCCCTCGCAC +
Preference number: 6 (lower is better)
Translates to: HLELVEHELAQA*QQGRLRVVPSH
Trigger: GTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTCGTGCTCTACGAGCTCCAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp TATGCGGACTCCGGGGCCAGGTCGGTGGCTGTGAACTaGCTCACTGTGGCGCCGACCTCCACGGTGGTGAAG +
Preference number: 6 (lower is better)
Translates to: YADSGARSVAVN*LTVAPTSTVVK
Trigger: CTTCACCACCGTGGAGGTCGGCGCCACAGTGAGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp TTGCCTCCGTTCCGCCCTGAGGGAGGCGCGGCGCTTTaGTCACACGAAGGAGGAGAAGCCGGTGAGCGGAGT +
Preference number: 6 (lower is better)
Translates to: LPPFRPEGGAAL*SHEGGEAGERS
Trigger: ACTCCGCTCACCGGCTTCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000615806.4
CDS CAA 72 bp CGCACCACCTCGCTCCACGGCCCAGCCCCGACGGCGTaGAAGGCCTGCATCTGCAGCTCGTATTCCATCCAC +
Preference number: 6 (lower is better)
Translates to: RTTSLHGPAPTA*KACICSSYSIH
Trigger: GTGGATGGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCTGGGCCGTGGAGCGAGGTGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 90 bp CGAAGTCCCAGATGCGAGCCCCATGCACCTGCCTGGTGGGTCGGCTaGCAGCAGCCCTGGATGAGGCATCAGGGGCACTGGATGCGGAGT +
Preference number: 6 (lower is better)
Translates to: RSPRCEPHAPAWWVG*QQPWMRHQGHWMRS
Trigger: ACTCCGCATCCAGTGCCCCTGATGCCTCATCCAGGGCTGCTGCAAGCCGACCCACCAGGCAGGTGCATGGGGCTCGCATCTGGGACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS CAA 90 bp CAGGACGCTGACCCACGGGGAGCCACACTTAGGTACGCAGACGGGTaGCTCGTCAGGAGGATAGCTACACTGTGCGGCGCAGGTGCGCGG +
Preference number: 6 (lower is better)
Translates to: QDADPRGATLRYADG*LVRRIATLCGAGAR
Trigger: CCGCGCACCTGCGCCGCACAGTGTAGCTATCCTCCTGACGAGCAACCCGTCTGCGTACCTAAGTGTGGCTCCCCGTGGGTCAGCGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS TCA 72 bp GCACCACCTCGCTCCACGGCCCAGCCCCGACGGCGTTaGAGGCCTGCATCTGCAGCTCGTATTCCATCCACT +
Preference number: 6 (lower is better)
Translates to: APPRSTAQPRRR*RPASAARIPST
Trigger: AGTGGATGGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCTGGGCCGTGGAGCGAGGTGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp GCCCTGCCTCGTCTTGGCGGACAGCCTGAAGATGTATaGGGACTCCGGGGCCAGGTCGGTGGCTGTGAACTG +
Preference number: 6 (lower is better)
Translates to: ALPRLGGQPEDV*GLRGQVGGCEL
Trigger: CAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp GGGCTTCCACTTGAGCTGACACAGCCGTGGAGGGGTTaGTGGGCTCCCCGTAGCCCGCCTCATTCACAGCCA +
Preference number: 6 (lower is better)
Translates to: GLPLELTQPWRG*WAPRSPPHSQP
Trigger: TGGCTGTGAATGAGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTGTGTCAGCTCAAGTGGAAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000467827.1
ENST00000476701.5
ENST00000615806.4
CDS CCA 72 bp CCGACTGCGTGTGGTTCCCTCGCACGATGTGGCTCCTaGGCTCGGGATCCAGGTCTTTGGCCCGGAACAGGA +
Preference number: 6 (lower is better)
Translates to: PTACGSLARCGS*ARDPGLWPGTG
Trigger: TCCTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAACCACACGCAGTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS CCA 72 bp CCCTCGGAGGCTGCCACTGTATCAGGACAGAGGACGTaGTGTGTGGCGTCGCTGAGACAGATCCCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: PSEAATVSGQRT*CVASLRQIPGA
Trigger: AGCCCCCGGGATCTGTCTCAGCGACGCCACACACCACGTCCTCTGTCCTGATACAGTGGCAGCCTCCGAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS CCA 72 bp CGAAGTCCCAGATGCGAGCCCCATGCACCTGCCTGGTaGGTCGGCTTGCAGCAGCCCTGGATGAGGCATCAG +
Preference number: 6 (lower is better)
Translates to: RSPRCEPHAPAW*VGLQQPWMRHQ
Trigger: CTGATGCCTCATCCAGGGCTGCTGCAAGCCGACCCACCAGGCAGGTGCATGGGGCTCGCATCTGGGACTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS CCA 72 bp GTGCGAAGTCCCAGATGCGAGCCCCATGCACCTGCCTaGTGGGTCGGCTTGCAGCAGCCCTGGATGAGGCAT +
Preference number: 6 (lower is better)
Translates to: VRSPRCEPHAPA*WVGLQQPWMRH
Trigger: ATGCCTCATCCAGGGCTGCTGCAAGCCGACCCACCAGGCAGGTGCATGGGGCTCGCATCTGGGACTTCGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS CAA 90 bp CCCTGCAGGATGCCGTTGGCCGCCGCAGGCTCGCCCCAGGACACGTaGAGCGTGGTGGAGGTTATTTCTGAGAACGCCAGAAAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: PCRMPLAAAGSPQDT*SVVEVISENARKLG
Trigger: CCCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACCACGCTCAACGTGTCCTGGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp GCCCGTGCAGGACGAGGGCGAACACCACCAGCAGGATaGCGATCAGGCTGGACAGAGCCATCACCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: ARAGRGRTPPAG*RSGWTEPSPGG
Trigger: TCCTCCTGGTGATGGCTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp CGGAGTGAAACCCGGGGGTCATGTGTGGCACCACAGTaGAGCGTGGCCGTGGTCCCCTTAATCACCACGTGG +
Preference number: 6 (lower is better)
Translates to: RSETRGSCVAPQ*SVAVVPLITTW
Trigger: CCACGTGGTGATTAAGGGGACCACGGCCACGCTGCACTGTGGTGCCACACATGACCCCCGGGTTTCACTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000484011.1
ENST00000615806.4
CDS GCA 72 bp AGAAGTGCGAAGTCCCAGATGCGAGCCCCATGCACCTaGCTGGTGGGTCGGCTTGCAGCAGCCCTGGATGAG +
Preference number: 6 (lower is better)
Translates to: RSAKSQMRAPCT*LVGRLAAALDE
Trigger: CTCATCCAGGGCTGCTGCAAGCCGACCCACCAGGCAGGTGCATGGGGCTCGCATCTGGGACTTCGCACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS GCA 72 bp GAGGTTAGAAGTGCGAAGTCCCAGATGCGAGCCCCATaGACCTGCCTGGTGGGTCGGCTTGCAGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: EVRSAKSQMRAP*TCLVGRLAAAL
Trigger: CAGGGCTGCTGCAAGCCGACCCACCAGGCAGGTGCATGGGGCTCGCATCTGGGACTTCGCACTTCTAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS GCA 72 bp CTCCTTGGCCGAAGGAATGGCGTTGCTCTCATTACCTaGGGCACGCTGGGCCCGGAGAGGGATAGGGACAGG +
Preference number: 6 (lower is better)
Translates to: LLGRRNGVALIT*GTLGPERDRDR
Trigger: CCTGTCCCTATCCCTCTCCGGGCCCAGCGTGCCGCAGGTAATGAGAGCAACGCCATTCCTTCGGCCAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481856.1
CDS CCA 72 bp GGAGGTGAGTCTCACTTCGGGGAACACGAGCCTCACTaGTGGGCCTGGGGCATCGTCTTTGGTGCGCTCCAG +
Preference number: 6 (lower is better)
Translates to: GGESHFGEHEPH*WAWGIVFGALQ
Trigger: CTGGAGCGCACCAAAGACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS CCA 72 bp CTTCCACTTGAGCTGACACAGCCGTGGAGGGGTTGCTaGGCTCCCCGTAGCCCGCCTCATTCACAGCCACCA +
Preference number: 6 (lower is better)
Translates to: LPLELTQPWRGC*APRSPPHSQPP
Trigger: TGGTGGCTGTGAATGAGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTGTGTCAGCTCAAGTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000467827.1
ENST00000476701.5
ENST00000615806.4
CDS CAA 72 bp TCGCAGACGTATGGCCCGGTGTCCGCGGACGTCGGGTaGCTGATGGTGAGGCGTCTTCCAAAGCTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: SQTYGPVSADVG*LMVRRLPKLWR
Trigger: CCTCCACAGCTTTGGAAGACGCCTCACCATCAGCAACCCGACGTCCGCGGACACCGGGCCATACGTCTGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS CAA 72 bp GGGCTAGGCCGGGGTGGGGACCTGGTCCCGTTCTTCTaGGAGAAGGTGCTCTTGACATTGAGGTGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: GLGRGGDLVPFF*EKVLLTLRWRL
Trigger: CAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGCCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS CAA 90 bp CCAGAGTGTCCCTCAGTCCACTGCAGCGTCAGTTCAGAGGCGGACTaGGTGACCAGGACATCTCTAGGCGAGCCCGGGGATCCCTCGGCT +
Preference number: 6 (lower is better)
Translates to: PECPSVHCSVSSEAD*VTRTSLGEPGDPSA
Trigger: AGCCGAGGGATCCCCGGGCTCGCCTAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACACTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS CAA 90 bp GCTGTACTGGCCCCTGCCCACTTCATTCACCGCGCACACCCGGAATaGATAGGTACGAGCCGGAGTCAGGCCACTCACGGTGACGCCTGT +
Preference number: 6 (lower is better)
Translates to: AVLAPAHFIHRAHPE*IGTSRSQATHGDAC
Trigger: ACAGGCGTCACCGTGAGTGGCCTGACTCCGGCTCGTACCTATCAATTCCGGGTGTGCGCGGTGAATGAAGTGGGCAGGGGCCAGTACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 90 bp GCCCGCCTCATTCACAGCCACCACCCGGAACTCGTAAGTCACTCCTaGCCGGAGCTTATCCAGGCTGAGGGTGTAGGATGTGGCGCTCCG +
Preference number: 6 (lower is better)
Translates to: ARLIHSHHPELVSHS*PELIQAEGVGCGAP
Trigger: CGGAGCGCCACATCCTACACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAGTTCCGGGTGGTGGCTGTGAATGAGGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000467827.1
ENST00000476701.5
ENST00000615806.4
CDS CAA 90 bp GGCCGGGGTGGGGACCTGGTCCCGTTCTTCTTGGAGAAGGTGCTCTaGACATTGAGGTGGCGGCTGCTGAGCTCCAGGGCAGCAAATCCT +
Preference number: 6 (lower is better)
Translates to: GRGGDLVPFFLEKVL*TLRWRLLSSRAANP
Trigger: AGGATTTGCTGCCCTGGAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp GGTCTGTCACCAGGCAGTAGTTCACCTCCGGGCTGGTaGTGTTCCGCTGCTGGTACTCTCCGGGAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: GLSPGSSSPPGW*CSAAGTLREGQ
Trigger: CTGGCCTTCCCGGAGAGTACCAGCAGCGGAACATCACCAGCCCGGAGGTGAACTACTGCCTGGTGACAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 72 bp GCTCCTCCGGAGGTTGCCACACTATCCGCACGGAGGTaGGTCTCACTTCGGGGAACACGAGCCTCACTGGTG +
Preference number: 6 (lower is better)
Translates to: APPEVATLSARR*VSLRGTRASLV
Trigger: CACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp AGGCGAGAGCAGAGGTTAGAAGTGCGAAGTCCCAGATaGGAGCCCCATGCACCTGCCTGGTGGGTCGGCTTG +
Preference number: 6 (lower is better)
Translates to: RREQRLEVRSPR*EPHAPAWWVGL
Trigger: CAAGCCGACCCACCAGGCAGGTGCATGGGGCTCGCATCTGGGACTTCGCACTTCTAACCTCTGCTCTCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS GCA 72 bp GAGGTTCTGTGGTCTCCTTGGCCGAAGGAATGGCGTTaGTCTCATTACCTGCGGCACGCTGGGCCCGGAGAG +
Preference number: 6 (lower is better)
Translates to: EVLWSPWPKEWR*SHYLRHAGPGE
Trigger: CTCTCCGGGCCCAGCGTGCCGCAGGTAATGAGAGCAACGCCATTCCTTCGGCCAAGGAGACCACAGAACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481856.1
CDS CCA 72 bp CCTCTGGACGCAGCTTCTGGATGCGCAGGCCTCCGCTaGCGAGCACTTTGTATCGAGGATTCTGGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: PLDAASGCAGLR*RALCIEDSGAC
Trigger: GCAGGCTCCAGAATCCTCGATACAAAGTGCTCGCCAGCGGAGGCCTGCGCATCCAGAAGCTGCGTCCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp CAGTGCAGCGTGGCCGTGGTCCCCTTAATCACCACGTaGTCCTCAGGAGGGTGGACGATGGACGTCCGATTC +
Preference number: 6 (lower is better)
Translates to: QCSVAVVPLITT*SSGGWTMDVRF
Trigger: GAATCGGACGTCCATCGTCCACCCTCCTGAGGACCACGTGGTGATTAAGGGGACCACGGCCACGCTGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp TCAGGTAGCATCAACCTGCTTGTCTCGGCGCTGTACTaGCCCCTGCCCACTTCATTCACCGCGCACACCCGG +
Preference number: 6 (lower is better)
Translates to: SGSINLLVSALY*PLPTSFTAHTR
Trigger: CCGGGTGTGCGCGGTGAATGAAGTGGGCAGGGGCCAGTACAGCGCCGAGACAAGCAGGTTGATGCTACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp GCTGAGGCGGAGGGTTCCACAGGAACTGAATGGTGGTaGAGTTCACGGCTTCCGTCTGCACGTTCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: AEAEGSTGTEWW*SSRLPSARSAG
Trigger: CCCCGCAGAACGTGCAGACGGAAGCCGTGAACTCCACCACCATTCAGTTCCTGTGGAACCCTCCGCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp GAGGGTGAGGTTCTGTGGTCTCCTTGGCCGAAGGAATaGCGTTGCTCTCATTACCTGCGGCACGCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: EGEVLWSPWPKE*RCSHYLRHAGP
Trigger: GGGCCCAGCGTGCCGCAGGTAATGAGAGCAACGCCATTCCTTCGGCCAAGGAGACCACAGAACCTCACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481856.1
CDS CAA 72 bp GCCCCTGCCCACTTCATTCACCGCGCACACCCGGAATaGATAGGTACGAGCCGGAGTCAGGCCACTCACGGT +
Preference number: 6 (lower is better)
Translates to: APAHFIHRAHPE*IGTSRSQATHG
Trigger: ACCGTGAGTGGCCTGACTCCGGCTCGTACCTATCAATTCCGGGTGTGCGCGGTGAATGAAGTGGGCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 72 bp GTCACTGCCCTGCTGAAGACGCCCAGACCGGCCCCGTaGTACGCCGCCACCTGTATCTCATACTGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: VTALLKTPRPAP*YAATCISYCVQ
Trigger: CTGGACACAGTATGAGATACAGGTGGCGGCGTACAACGGGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 72 bp ATGCCGTTGGCCGCCGCAGGCTCGCCCCAGGACACGTaGAGCGTGGTGGAGGTTATTTCTGAGAACGCCAGA +
Preference number: 6 (lower is better)
Translates to: MPLAAAGSPQDT*SVVEVISENAR
Trigger: TCTGGCGTTCTCAGAAATAACCTCCACCACGCTCAACGTGTCCTGGGGCGAGCCTGCGGCGGCCAACGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS CAA 72 bp CCCTCAGTCCACTGCAGCGTCAGTTCAGAGGCGGACTaGGTGACCAGGACATCTCTAGGCGAGCCCGGGGAT +
Preference number: 6 (lower is better)
Translates to: PSVHCSVSSEAD*VTRTSLGEPGD
Trigger: ATCCCCGGGCTCGCCTAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACTGACGCTGCAGTGGACTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS CAA 72 bp GACCCACGGGGAGCCACACTTAGGTACGCAGACGGGTaGCTCGTCAGGAGGATAGCTACACTGTGCGGCGCA +
Preference number: 6 (lower is better)
Translates to: DPRGATLRYADG*LVRRIATLCGA
Trigger: TGCGCCGCACAGTGTAGCTATCCTCCTGACGAGCAACCCGTCTGCGTACCTAAGTGTGGCTCCCCGTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS CAA 90 bp GTGCGCCCCTGCTGGGGGTCACTCTTAGGTCCATCTCCGGCGGCGTaGAAGGCTGATATGCTGACCAGGTACTTGGTATGGCTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: VRPCWGSLLGPSPAA*KADMLTRYLVWLVR
Trigger: CCTGACCAGCCATACCAAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGGACCTAAGAGTGACCCCCAGCAGGGGCGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp GCGCTTGGACACGGAAGAAATAGGTCACTCCCTTGGTaGGGTCCCGCACCTTCAGCCAGCGCTGCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: ALGHGRNRSLPW*GPAPSASAASS
Trigger: GGAACTGGCAGCGCTGGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCTATTTCTTCCGTGTCCAAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp GGAAGATTCCGGAGTCCTCTGGACGCAGCTTCTGGATaGGCAGGCCTCCGCTGGCGAGCACTTTGTATCGAG +
Preference number: 6 (lower is better)
Translates to: GRFRSPLDAASG*AGLRWRALCIE
Trigger: CTCGATACAAAGTGCTCGCCAGCGGAGGCCTGCGCATCCAGAAGCTGCGTCCAGAGGACTCCGGAATCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp GTGGTAGGTGTGTCGCCAGAGTGTCCCTCAGTCCACTaGAGCGTCAGTTCAGAGGCGGACTTGGTGACCAGG +
Preference number: 6 (lower is better)
Translates to: VVGVSPECPSVH*SVSSEADLVTR
Trigger: CCTGGTCACCAAGTCCGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACACTCTGGCGACACACCTACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp GCAGGCCCCCTTCGTGAATCAAGGCCCAGCCAACTGTaGTTTCTCCCTGAGGATGGCTGTGTGCAGGGCTTC +
Preference number: 6 (lower is better)
Translates to: AGPLRESRPSQL*FLPEDGCVQGF
Trigger: GAAGCCCTGCACACAGCCATCCTCAGGGAGAAAGCACAGTTGGCTGGGCCTTGATTCACGAAGGGGGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS CCA 72 bp CCATCAAAGGGCCGGACCCAAGAGAGCACCACGGCGTaGCTGTGGGAAGAATTAGGGCTGACCAGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: PSKGRTQESTTA*LWEELGLTRRF
Trigger: GAACCTCCTGGTCAGCCCTAATTCTTCCCACAGCCACGCCGTGGTGCTCTCTTGGGTCCGGCCCTTTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp AGCCTCGCCGACAAAGACCTCCACGGGCGCGCTGGCTaGGCTCTCGCCGATGATGTTATAGGCGGTCATTAT +
Preference number: 6 (lower is better)
Translates to: SLADKDLHGRAG*ALADDVIGGHY
Trigger: ATAATGACCGCCTATAACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTCTTTGTCGGCGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000481856.1
ENST00000615806.4
CDS CCA 72 bp GCACGATGTGGCTCCTGGGCTCGGGATCCAGGTCTTTaGCCCGGAACAGGATCTGTGGTATCGACACAGCAC +
Preference number: 6 (lower is better)
Translates to: ARCGSWARDPGL*PGTGSVVSTQH
Trigger: GTGCTGTGTCGATACCACAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS CAA 72 bp GGGGACCTGGTCCCGTTCTTCTTGGAGAAGGTGCTCTaGACATTGAGGTGGCGGCTGCTGAGCTCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: GDLVPFFLEKVL*TLRWRLLSSRA
Trigger: TGCCCTGGAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS CAA 72 bp GTGGCCTCAGATTCTGATGCATCTGCCGACTTCTCCTaGAGGCTCACGCTCTCGGTCAGCACGGCGCCGTTG +
Preference number: 6 (lower is better)
Translates to: VASDSDASADFS*RLTLSVSTAPL
Trigger: CAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCATCAGAATCTGAGGCCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS CAA 72 bp CGCACGATGTGGCTCCTGGGCTCGGGATCCAGGTCTTaGGCCCGGAACAGGATCTGTGGTATCGACACAGCA +
Preference number: 6 (lower is better)
Translates to: RTMWLLGSGSRS*ARNRICGIDTA
Trigger: TGCTGTGTCGATACCACAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS CAA 90 bp GTGTACTCGGTCACTGCCCTGCTGAAGACGCCCAGACCGGCCCCGTaGTACGCCGCCACCTGTATCTCATACTGTGTCCAGATGATCAGG +
Preference number: 6 (lower is better)
Translates to: VYSVTALLKTPRPAP*YAATCISYCVQMIR
Trigger: CCTGATCATCTGGACACAGTATGAGATACAGGTGGCGGCGTACAACGGGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGACCGAGTACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 90 bp GGTGGGGACCTGGTCCCGTTCTTCTTGGAGAAGGTGCTCTTGACATaGAGGTGGCGGCTGCTGAGCTCCAGGGCAGCAAATCCTCCGTTG +
Preference number: 6 (lower is better)
Translates to: GGDLVPFFLEKVLLT*RWRLLSSRAANPPL
Trigger: CAACGGAGGATTTGCTGCCCTGGAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGGTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS CAA 90 bp TGGTTCCCTCGCACGATGTGGCTCCTGGGCTCGGGATCCAGGTCTTaGGCCCGGAACAGGATCTGTGGTATCGACACAGCACGAGGGTTA +
Preference number: 6 (lower is better)
Translates to: WFPRTMWLLGSGSRS*ARNRICGIDTARGL
Trigger: TAACCCTCGTGCTGTGTCGATACCACAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS TCA 72 bp AGGAAGGTCTGGGGGCACTCCAGAAGAAATGGTGGATaGAGTCACCAGGCCAGTGCCCACGGCAGTCACAGC +
Preference number: 6 (lower is better)
Translates to: RKVWGHSRRNGG*SHQASAHGSHS
Trigger: GCTGTGACTGCCGTGGGCACTGGCCTGGTGACTTCATCCACCATTTCTTCTGGAGTGCCCCCAGACCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 72 bp TCAGTCTGTCAACGACGCATGCTGTCGCCTCATGGCTaGTGGACGAGGAGTAGGTCTGCCACTCACCCCGAG +
Preference number: 6 (lower is better)
Translates to: SVCQRRMLSPHG*WTRSRSATHPE
Trigger: CTCGGGGTGAGTGGCAGACCTACTCCTCGTCCATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp ACTCGTAAGTCACTCCTTGCCGGAGCTTATCCAGGCTaGGGGTGTAGGATGTGGCGCTCCGCGGGATGTCCT +
Preference number: 6 (lower is better)
Translates to: TRKSLLAGAYPG*GCRMWRSAGCP
Trigger: AGGACATCCCGCGGAGCGCCACATCCTACACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000467827.1
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp TGGCCTCAGATTCTGATGCATCTGCCGACTTCTCCTTaGGGCTCACGCTCTCGGTCAGCACGGCGCCGTTGT +
Preference number: 6 (lower is better)
Translates to: WPQILMHLPTSP*GSRSRSARRRC
Trigger: ACAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCATCAGAATCTGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp AAAAATAGACTCCGGAAAGTTGCCTCCGTTCCGCCCTaGGGGAGGCGCGGCGCTTTGCTCACACGAAGGAGG +
Preference number: 6 (lower is better)
Translates to: KNRLRKVASVPP*GRRGALLTRRR
Trigger: CCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000615806.4
CDS TCA 72 bp GCCCTGGATGAGGCATCAGGGGCACTGGATGCGGAGTaGGTGCTGAATGGGGACGGAGTCTCAGTTTCGCAA +
Preference number: 6 (lower is better)
Translates to: ALDEASGALDAE*VLNGDGVSVSQ
Trigger: TTGCGAAACTGAGACTCCGTCCCCATTCAGCACTCACTCCGCATCCAGTGCCCCTGATGCCTCATCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS GCA 72 bp GATGGACGTCCGATTCCACACAGTGAGCGTGGCCGATaGATTCAGGGAGCCCTCTGTGTTGGCCGCATAGCA +
Preference number: 6 (lower is better)
Translates to: DGRPIPHSERGR*IQGALCVGRIA
Trigger: TGCTATGCGGCCAACACAGAGGGCTCCCTGAATGCATCGGCCACGCTCACTGTGTGGAATCGGACGTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp GCATCAACCTGCTTGTCTCGGCGCTGTACTGGCCCCTaGCCACTTCATTCACCGCGCACACCCGGAATTGAT +
Preference number: 6 (lower is better)
Translates to: ASTCLSRRCTGP*PLHSPRTPGID
Trigger: ATCAATTCCGGGTGTGCGCGGTGAATGAAGTGGGCAGGGGCCAGTACAGCGCCGAGACAAGCAGGTTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp CTCCAGAAGAAATGGTGGATGAAGTCACCAGGCCAGTaGCCACGGCAGTCACAGCGGCCACGTCGATGGTGT +
Preference number: 6 (lower is better)
Translates to: LQKKWWMKSPGQ*PRQSQRPRRWC
Trigger: ACACCATCGACGTGGCCGCTGTGACTGCCGTGGGCACTGGCCTGGTGACTTCATCCACCATTTCTTCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp CACTGGAAGATTCCGGAGTCCTCTGGACGCAGCTTCTaGATGCGCAGGCCTCCGCTGGCGAGCACTTTGTAT +
Preference number: 6 (lower is better)
Translates to: HWKIPESSGRSF*MRRPPLASTLY
Trigger: ATACAAAGTGCTCGCCAGCGGAGGCCTGCGCATCCAGAAGCTGCGTCCAGAGGACTCCGGAATCTTCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp GTGGTCCCCTTAATCACCACGTGGTCCTCAGGAGGGTaGACGATGGACGTCCGATTCCACACAGTGAGCGTG +
Preference number: 6 (lower is better)
Translates to: VVPLITTWSSGG*TMDVRFHTVSV
Trigger: CACGCTCACTGTGTGGAATCGGACGTCCATCGTCCACCCTCCTGAGGACCACGTGGTGATTAAGGGGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp ACTGCTGAGGCGGAGGGTTCCACAGGAACTGAATGGTaGTGGAGTTCACGGCTTCCGTCTGCACGTTCTGCG +
Preference number: 6 (lower is better)
Translates to: TAEAEGSTGTEW*WSSRLPSARSA
Trigger: CGCAGAACGTGCAGACGGAAGCCGTGAACTCCACCACCATTCAGTTCCTGTGGAACCCTCCGCCTCAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp AATCCACCTGGAGATGGACGTTTTCCCGTCATAGCCTaGCCGGAACTGAAGGGTGGCGGAGCGAGGGCTGAT +
Preference number: 6 (lower is better)
Translates to: NPPGDGRFPVIA*PELKGGGARAD
Trigger: ATCAGCCCTCGCTCCGCCACCCTTCAGTTCCGGCCAGGCTATGACGGGAAAACGTCCATCTCCAGGTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp ATGGTGAATTCTCTCTCCAGCCGGTCACTGACGACTTaGGCCACTGCTGAGGACTGGAGGTCTGAGCGCCAG +
Preference number: 6 (lower is better)
Translates to: MVNSLSSRSLTT*ATAEDWRSERQ
Trigger: CTGGCGCTCAGACCTCCAGTCCTCAGCAGTGGCCCAAGTCGTCAGTGACCGGCTGGAGAGAGAATTCACCAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp AGAAAGCCCGTGTTGCAGGCTGATCCCAGGAAGGGGTaGGAAGCCGGGCTGACAAGCTGTCAGAAACACGCT +
Preference number: 6 (lower is better)
Translates to: RKPVLQADPRKG*EAGLTSCQKHA
Trigger: AGCGTGTTTCTGACAGCTTGTCAGCCCGGCTTCCCACCCCTTCCTGGGATCAGCCTGCAACACGGGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466611.1
CDS CCA 72 bp CTCGGGATCCAGGTCTTTGGCCCGGAACAGGATCTGTaGTATCGACACAGCACGAGGGTTATCAGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: LGIQVFGPEQDL*YRHSTRVIRRR
Trigger: CCGCCTCCTGATAACCCTCGTGCTGTGTCGATACCACAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476701.5
CDS CAA 90 bp TCTGGACGCAGCTTCTGGATGCGCAGGCCTCCGCTGGCGAGCACTTaGTATCGAGGATTCTGGAGCCTGCTGATGGAGATGGCATCCTTG +
Preference number: 6 (lower is better)
Translates to: SGRSFWMRRPPLAST*YRGFWSLLMEMASL
Trigger: CAAGGATGCCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTGCTCGCCAGCGGAGGCCTGCGCATCCAGAAGCTGCGTCCAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 90 bp ACATTGAGGTGGCGGCTGCTGAGCTCCAGGGCAGCAAATCCTCCGTaGTCCAGGGTCACAGACTCCTCCATGGTGGAGATCCCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: TLRWRLLSSRAANPP*SRVTDSSMVEIPFP
Trigger: AGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGACCCTGGACAACGGAGGATTTGCTGCCCTGGAGCTCAGCAGCCGCCACCTCAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS CAA 90 bp TCAGAGTCCGTGGCCTCAGATTCTGATGCATCTGCCGACTTCTCCTaGAGGCTCACGCTCTCGGTCAGCACGGCGCCGTTGTACTTGTTG +
Preference number: 6 (lower is better)
Translates to: SESVASDSDASADFS*RLTLSVSTAPLYLL
Trigger: CAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACGGACTCTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp GGTCTTTGGCCCGGAACAGGATCTTGTAGCCCAGTATaGGCCCATTCTGGTCCTGTTCCGGCACGGATGTCC +
Preference number: 6 (lower is better)
Translates to: GLWPGTGSCSPV*AHSGPVPARMS
Trigger: GGACATCCGTGCCGGAACAGGACCAGAATGGGCTCATACTGGGCTACAAGATCCTGTTCCGGGCCAAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 72 bp AGACCTCCACGGGCGCGCTGGCTGGGCTCTCGCCGATaGTGTTATAGGCGGTCATTATTACTTCATAGCGCC +
Preference number: 6 (lower is better)
Translates to: RPPRARWLGSRR*CYRRSLLLHSA
Trigger: GGCGCTATGAAGTAATAATGACCGCCTATAACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000481856.1
ENST00000615806.4
CDS GCA 72 bp AGGTGGTCTCACTGGATCCAGCCACCACACTTCTGTTaGCCGGGGGAACCACAATGGTTGGGGCCATGGTTT +
Preference number: 6 (lower is better)
Translates to: RWSHWIQPPHFC*PGEPQWLGPWF
Trigger: AAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGCTGGATCCAGTGAGACCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS GCA 72 bp CGGTACCTGAGGATGTATCCACGCAACACCCCGTTGTaGTCTGTTTCTGGGGGTGGCTGCCACTGGACCATA +
Preference number: 6 (lower is better)
Translates to: RYLRMYPRNTPL*SVSGGGCHWTI
Trigger: TATGGTCCAGTGGCAGCCACCCCCAGAAACAGAGCACAACGGGGTGTTGCGTGGATACATCCTCAGGTACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp GGCAATAGTGACCACAGTGACAGCCTCGGGGGCATCTaGCGGCCATGCCAGAAGCTTGTATCCCTGGTTGAT +
Preference number: 6 (lower is better)
Translates to: GNSDHSDSLGGI*RPCQKLVSLVD
Trigger: ATCAACCAGGGATACAAGCTTCTGGCATGGCCGGCAGATGCCCCCGAGGCTGTCACTGTGGTCACTATTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp CATTCACGGCCTGCACGTAGTATGCCCCGGCATCACTaGTTGTGGTGGCGAGGATCACCAGCTGATTCTCCA +
Preference number: 6 (lower is better)
Translates to: HSRPARSMPRHH*LWWRGSPADSP
Trigger: TGGAGAATCAGCTGGTGATCCTCGCCACCACAACCAGTGATGCCGGGGCATACTACGTGCAGGCCGTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp CAGCCACCACACTTCTGTTGCCCGGGGGAACCACAATaGTTGGGGCCATGGTTTCAGGTGTGCCAACATCTC +
Preference number: 6 (lower is better)
Translates to: QPPHFCCPGEPQ*LGPWFQVCQHL
Trigger: GAGATGTTGGCACACCTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS CCA 72 bp GCCTGGCACTGGCTATACATTCCAAGGTGGTCTCACTaGATCCAGCCACCACACTTCTGTTGCCCGGGGGAA +
Preference number: 6 (lower is better)
Translates to: AWHWLYIPRWSH*IQPPHFCCPGE
Trigger: TTCCCCCGGGCAACAGAAGTGTGGTGGCTGGATCCAGTGAGACCACCTTGGAATGTATAGCCAGTGCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS CAA 72 bp TCACGGCCTGCACGTAGTATGCCCCGGCATCACTGGTaGTGGTGGCGAGGATCACCAGCTGATTCTCCAATG +
Preference number: 6 (lower is better)
Translates to: SRPARSMPRHHW*WWRGSPADSPM
Trigger: CATTGGAGAATCAGCTGGTGATCCTCGCCACCACAACCAGTGATGCCGGGGCATACTACGTGCAGGCCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 72 bp AAGGTGGTCTCACTGGATCCAGCCACCACACTTCTGTaGCCCGGGGGAACCACAATGGTTGGGGCCATGGTT +
Preference number: 6 (lower is better)
Translates to: KVVSLDPATTLL*PGGTTMVGAMV
Trigger: AACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGCTGGATCCAGTGAGACCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS CAA 72 bp AGCTTCTGGATGCGCAGGCCTCCGCTGGCGAGCACTTaGTATCGAGGATTCTGGAGCCTGCTGATGGAGATG +
Preference number: 6 (lower is better)
Translates to: SFWMRRPPLAST*YRGFWSLLMEM
Trigger: CATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTGCTCGCCAGCGGAGGCCTGCGCATCCAGAAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 72 bp CCACCACACTTCTGTTGCCCGGGGGAACCACAATGGTaGGGGCCATGGTTTCAGGTGTGCCAACATCTCCTG +
Preference number: 6 (lower is better)
Translates to: PPHFCCPGEPQW*GPWFQVCQHLL
Trigger: CAGGAGATGTTGGCACACCTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426596.1
CDS CAA 72 bp TTATGCAGCATGATGCGCTGGCCTCTGACCGCTGACTaGGGACACAAGCCGGGCGTGACACTTGTGAAGTGG +
Preference number: 6 (lower is better)
Translates to: LCSMMRWPLTAD*GHKPGVTLVKW
Trigger: CCACTTCACAAGTGTCACGCCCGGCTTGTGTCCCAAGTCAGCGGTCAGAGGCCAGCGCATCATGCTGCATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484011.1
CDS TCA 72 bp TCTTGTACTCGTGCGTCGTGCTGTTCAGGGTGTGCGTaGGACGAGAGTCGTTCCTGCCGTACACTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: SCTRASCCSGCA*DESRSCRTLPK
Trigger: CTTGGGAAGTGTACGGCAGGAACGACTCTCGTCTCACGCACACCCTGAACAGCACGACGCACGAGTACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 72 bp TGGAACATCCTGCAGCGTGGTCACCGCCTCTGTCTCTaGACTGAAGTCACTGTCCCCAATGTCGTTGGTGGC +
Preference number: 6 (lower is better)
Translates to: WNILQRGHRLCL*TEVTVPNVVGG
Trigger: GCCACCAACGACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp AGGGAACTCTTTAAAGTCACCAGCCAGCGAGGAGGGTaGGGTTCTGTGGTCTCCTTGGCCGAAGGAATGGCG +
Preference number: 6 (lower is better)
Translates to: RELFKVTSQRGG*GSVVSLAEGMA
Trigger: CGCCATTCCTTCGGCCAAGGAGACCACAGAACCTCACCCTCCTCGCTGGCTGGTGACTTTAAAGAGTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481856.1
CDS TCA 72 bp GTAGTTATGCAGCATGATGCGCTGGCCTCTGACCGCTaGCTTGGGACACAAGCCGGGCGTGACACTTGTGAA +
Preference number: 6 (lower is better)
Translates to: VVMQHDALASDR*LGTQAGRDTCE
Trigger: TTCACAAGTGTCACGCCCGGCTTGTGTCCCAAGTCAGCGGTCAGAGGCCAGCGCATCATGCTGCATAACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484011.1
CDS GCA 72 bp TGGATCTTGTACTCGTGCGTCGTGCTGTTCAGGGTGTaGGTGAGACGAGAGTCGTTCCTGCCGTACACTTCC +
Preference number: 6 (lower is better)
Translates to: WILYSCVVLFRV*VRRESFLPYTS
Trigger: GGAAGTGTACGGCAGGAACGACTCTCGTCTCACGCACACCCTGAACAGCACGACGCACGAGTACAAGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp GTGGTGAGAGATGAGAGGCCTTGGATCTTGTACTCGTaGGTCGTGCTGTTCAGGGTGTGCGTGAGACGAGAG +
Preference number: 6 (lower is better)
Translates to: VVRDERPWILYS*VVLFRVCVRRE
Trigger: CTCTCGTCTCACGCACACCCTGAACAGCACGACGCACGAGTACAAGATCCAAGGCCTCTCATCTCTCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp CACCACACTTCTGTTGCCCGGGGGAACCACAATGGTTaGGGCCATGGTTTCAGGTGTGCCAACATCTCTTGC +
Preference number: 6 (lower is better)
Translates to: HHTSVARGNHNG*GHGFRCANISC
Trigger: GCAAGAGATGTTGGCACACCTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp AGGCCTCCGCTGGCGAGCACTTTGTATCGAGGATTCTaGAGCCTGCTGATGGAGATGGCATCCTTGTACCAC +
Preference number: 6 (lower is better)
Translates to: RPPLASTLYRGF*SLLMEMASLYH
Trigger: GTGGTACAAGGATGCCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTGCTCGCCAGCGGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp CCCGTCCTTCTCCACCACGATCCTAGACGTGCTCGATaGAGTCAGGGCCACGTTGTCCTTCTTCCAAACGTA +
Preference number: 6 (lower is better)
Translates to: PVLLHHDPRRAR*SQGHVVLLPNV
Trigger: TACGTTTGGAAGAAGGACAACGTGGCCCTGACTCCATCGAGCACGTCTAGGATCGTGGTGGAGAAGGACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000484011.1
ENST00000615806.4
CDS CCA 72 bp GTTCGTTATGTGTCCATGGTGGACTCCGTGGAAATCTaGGGCAATAGTGACCACAGTGACAGCCTCGGGGGC +
Preference number: 6 (lower is better)
Translates to: VRYVSMVDSVEI*GNSDHSDSLGG
Trigger: GCCCCCGAGGCTGTCACTGTGGTCACTATTGCCCCAGATTTCCACGGAGTCCACCATGGACACATAACGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 72 bp CCACCACACTTCTGTTGCCCGGGGGAACCACAATGGTaGGGGCCATGGTTTCAGGTGTGCCAACATCTCTTG +
Preference number: 6 (lower is better)
Translates to: PPHFCCPGEPQW*GPWFQVCQHLL
Trigger: CAAGAGATGTTGGCACACCTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 90 bp TGGATCCAGCCACCACACTTCTGTTGCCCGGGGGAACCACAATGGTaGGGGCCATGGTTTCAGGTGTGCCAACATCTCTTGCTATGCTCA +
Preference number: 6 (lower is better)
Translates to: WIQPPHFCCPGEPQW*GPWFQVCQHLLLCS
Trigger: TGAGCATAGCAAGAGATGTTGGCACACCTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGCTGGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 90 bp ATACATTCCAAGGTGGTCTCACTGGATCCAGCCACCACACTTCTGTaGCCCGGGGGAACCACAATGGTTGGGGCCATGGTTTCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: IHSKVVSLDPATTLL*PGGTTMVGAMVSGV
Trigger: CACACCTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTGTGGTGGCTGGATCCAGTGAGACCACCTTGGAATGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS TCA 72 bp TGGCGAGCACTTTGTATCGAGGATTCTGGAGCCTGCTaGTGGAGATGGCATCCTTGTACCACTGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: WRALCIEDSGAC*WRWHPCTTGGW
Trigger: CCACCCTCCAGTGGTACAAGGATGCCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTGCTCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 72 bp AGAAACAATCTCGCAGCTGTAGTCACCGATGTCGCCTaGCCACGTCTGGCTGATGAGAAGGGACCCGTCCTT +
Preference number: 6 (lower is better)
Translates to: RNNLAAVVTDVA*PRLADEKGPVL
Trigger: AAGGACGGGTCCCTTCTCATCAGCCAGACGTGGTCAGGCGACATCGGTGACTACAGCTGCGAGATTGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000484011.1
ENST00000615806.4
CDS TCA 72 bp ATTGATAGGTACGAGCCGGAGTCAGGCCACTCACGGTaGCGCCTGTCATCTCAGGGCCAACGTTTGACAGAT +
Preference number: 6 (lower is better)
Translates to: IDRYEPESGHSR*RLSSQGQRLTD
Trigger: ATCTGTCAAACGTTGGCCCTGAGATGACAGGCGTCACCGTGAGTGGCCTGACTCCGGCTCGTACCTATCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp CCTGTGCTGCAGTTCTTATACTTCTTATTCTGCCCGTaGAGGACGAGGGCGAACACCACCAGCAGGATGACG +
Preference number: 6 (lower is better)
Translates to: PVLQFLYFLFCP*RTRANTTSRMT
Trigger: CGTCATCCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAAGAACTGCAGCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS GCA 72 bp CCCTTTCCTGTGCTGCAGTTCTTATACTTCTTATTCTaGCCGTGCAGGACGAGGGCGAACACCACCAGCAGG +
Preference number: 6 (lower is better)
Translates to: PFPVLQFLYFLF*PCRTRANTTSR
Trigger: CCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAAGAACTGCAGCACAGGAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS CCA 72 bp GTCGGGTTGCTGATGGTGAGGCGTCTTCCAAAGCTGTaGAGGCCACTGGTGATTCTCACTCCATTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: VGLLMVRRLPKL*RPLVILTPFLF
Trigger: GAAGAGGAATGGAGTGAGAATCACCAGTGGCCTCCACAGCTTTGGAAGACGCCTCACCATCAGCAACCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000426596.1
ENST00000478527.1
ENST00000615806.4
CDS CCA 72 bp GTCATCCCGTCAGTAACTGTGGTGTCCACTGGCCGCTaGGTGAACACTGGAGCGATATTGGTTACATCCAGG +
Preference number: 6 (lower is better)
Translates to: VIPSVTVVSTGR*VNTGAILVTSR
Trigger: CCTGGATGTAACCAATATCGCTCCAGTGTTCACCCAGCGGCCAGTGGACACCACAGTTACTGACGGGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp TCCTGTTCCGGCACGGATGTCCATGTCAGTAAAATCTaGGTCGAGCTGACAGCCTCGGCTGACACGTTCTCA +
Preference number: 6 (lower is better)
Translates to: SCSGTDVHVSKI*VELTASADTFS
Trigger: TGAGAACGTGTCAGCCGAGGCTGTCAGCTCGACCCAGATTTTACTGACATGGACATCCGTGCCGGAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp TTAAAGTCACCAGCCAGCGAGGAGGGTGAGGTTCTGTaGTCTCCTTGGCCGAAGGAATGGCGTTGCTCTCAT +
Preference number: 6 (lower is better)
Translates to: LKSPASEEGEVL*SPWPKEWRCSH
Trigger: ATGAGAGCAACGCCATTCCTTCGGCCAAGGAGACCACAGAACCTCACCCTCCTCGCTGGCTGGTGACTTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481856.1
CDS CAA 72 bp ATTCACAGCCACCACCCGGAACTCGTAAGTCACTCCTaGCCGGAGCTTATCCAGGCTGAGGGTGTAGGATGT +
Preference number: 6 (lower is better)
Translates to: IHSHHPELVSHS*PELIQAEGVGC
Trigger: ACATCCTACACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAGTTCCGGGTGGTGGCTGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000467827.1
ENST00000476701.5
ENST00000615806.4
CDS TCA 72 bp TGTACGCCGCCACCTGTATCTCATACTGTGTCCAGATaGTCAGGTCTGTCACCAGGCAGTAGTTCACCTCCG +
Preference number: 6 (lower is better)
Translates to: CTPPPVSHTVSR*SGLSPGSSSPP
Trigger: CGGAGGTGAACTACTGCCTGGTGACAGACCTGATCATCTGGACACAGTATGAGATACAGGTGGCGGCGTACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp TTCTCCATTTTTCTCATTCACGGCCTGCACGTAGTATaGCCCGGCATCACTGGTTGTGGTGGCGAGGATCAC +
Preference number: 6 (lower is better)
Translates to: FSIFLIHGLHVV*PGITGCGGEDH
Trigger: GTGATCCTCGCCACCACAACCAGTGATGCCGGGGCATACTACGTGCAGGCCGTGAATGAGAAAAATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp TTCTGTTGCCCGGGGGAACCACAATGGTTGGGGCCATaGTTTCAGGTGTGCCAACATCTCTTGCTATGCTCA +
Preference number: 6 (lower is better)
Translates to: FCCPGEPQWLGP*FQVCQHLLLCS
Trigger: TGAGCATAGCAAGAGATGTTGGCACACCTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp AATGGCTGTCATCCCGTCAGTAACTGTGGTGTCCACTaGCCGCTGGGTGAACACTGGAGCGATATTGGTTAC +
Preference number: 6 (lower is better)
Translates to: NGCHPVSNCGVH*PLGEHWSDIGY
Trigger: GTAACCAATATCGCTCCAGTGTTCACCCAGCGGCCAGTGGACACCACAGTTACTGACGGGATGACAGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp TCCGCCCACTGGCCACTATATTTTTCGGGGGAGCACTaGGTGGTTCTTCAGGTAGCATCAACCTGCTTGTCT +
Preference number: 6 (lower is better)
Translates to: SAHWPLYFSGEH*VVLQVASTCLS
Trigger: AGACAAGCAGGTTGATGCTACCTGAAGAACCACCCAGTGCTCCCCCGAAAAATATAGTGGCCAGTGGGCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 72 bp TGGGCTGTGAGCTCAGCATGTAAAGCTATAGGGTTTTaGAGCGTCTTGGCCTCAGTGCCTGACCCGGCTTCA +
Preference number: 6 (lower is better)
Translates to: WAVSSACKAIGF*SVLASVPDPAS
Trigger: TGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTCACAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404826.7
ENST00000476701.5
ENST00000481856.1
ENST00000615806.4
CDS CAA 90 bp AAGCTGCTTTGGGCTGTGAGCTCAGCATGTAAAGCTATAGGGTTTTaGAGCGTCTTGGCCTCAGTGCCTGACCCGGCTTCATACTCCAGC +
Preference number: 6 (lower is better)
Translates to: KLLWAVSSACKAIGF*SVLASVPDPASYSS
Trigger: GCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTCACAGCCCAAAGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404826.7
ENST00000476701.5
ENST00000481856.1
ENST00000615806.4
CDS TCA 72 bp CCGGCATCACTGGTTGTGGTGGCGAGGATCACCAGCTaGTTCTCCAATGTGATGGCTATTCTGTTGCTTGGA +
Preference number: 6 (lower is better)
Translates to: PASLVVVARITS*FSNVMAILLLG
Trigger: TCCAAGCAACAGAATAGCCATCACATTGGAGAATCAGCTGGTGATCCTCGCCACCACAACCAGTGATGCCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS TCA 72 bp AGCTATAGGGTTTTTGAGCGTCTTGGCCTCAGTGCCTaGCCCGGCTTCATACTCCAGCTCCCTGTAGTAGAT +
Preference number: 6 (lower is better)
Translates to: SYRVFERLGLSA*PGFILQLPVVD
Trigger: ATCTACTACAGGGAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000481856.1
ENST00000615806.4
CDS GCA 72 bp GTGACGCCTGTCATCTCAGGGCCAACGTTTGACAGATaGACCTTCCATGGAGAGTTGTTTTCAGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: VTPVISGPTFDR*TFHGELFSESS
Trigger: GGAGCTCTCTGAAAACAACTCTCCATGGAAGGTGCATCTGTCAAACGTTGGCCCTGAGATGACAGGCGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp ATCCTCCGTTGTCCAGGGTCACAGACTCCTCCATGGTaGAGATCCCCTTTCCTGTGCTGCAGTTCTTATACT +
Preference number: 6 (lower is better)
Translates to: ILRCPGSQTPPW*RSPFLCCSSYT
Trigger: AGTATAAGAACTGCAGCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGACCCTGGACAACGGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000476701.5
ENST00000615806.4
CDS CAA 72 bp AGCTCAGCATGTAAAGCTATAGGGTTTTTGAGCGTCTaGGCCTCAGTGCCTGACCCGGCTTCATACTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSACKAIGFLSV*ASVPDPASYSS
Trigger: GCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000476701.5
ENST00000481856.1
ENST00000615806.4
CDS CAA 90 bp CAGTTATTGGAGTTGATTGTCTTAACAAAAATAGACTCCGGAAAGTaGCCTCCGTTCCGCCCTGAGGGAGGCGCGGCGCTTTGCTCACAC +
Preference number: 6 (lower is better)
Translates to: QLLELIVLTKIDSGK*PPFRPEGGAALCSH
Trigger: GTGTGAGCAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTCCAATAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000466611.1
ENST00000615806.4
CDS TCA 72 bp ACTCACGGTGACGCCTGTCATCTCAGGGCCAACGTTTaGCAGATGCACCTTCCATGGAGAGTTGTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: THGDACHLRANV*QMHLPWRVVFR
Trigger: TCTGAAAACAACTCTCCATGGAAGGTGCATCTGTCAAACGTTGGCCCTGAGATGACAGGCGTCACCGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS GCA 72 bp TTCTGCAGAAGAGTCAGTGTCGGATGCTATCTGAGATaGTGGCAACACCACTTAGAGGCTCCCGCATTACCT +
Preference number: 6 (lower is better)
Translates to: FCRRVSVGCYLR*WQHHLEAPALP
Trigger: AGGTAATGCGGGAGCCTCTAAGTGGTGTTGCCAGCATCTCAGATAGCATCCGACACTGACTCTTCTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478527.1
CDS CCA 72 bp TTCTTCAGGTTCGTTATGTGTCCATGGTGGACTCCGTaGAAATCTGGGGCAATAGTGACCACAGTGACAGCC +
Preference number: 6 (lower is better)
Translates to: FFRFVMCPWWTP*KSGAIVTTVTA
Trigger: GGCTGTCACTGTGGTCACTATTGCCCCAGATTTCCACGGAGTCCACCATGGACACATAACGAACCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp TGCAGAAGAGTCAGTGTCGGATGCTATCTGAGATGCTaGCAACACCACTTAGAGGCTCCCGCATTACCTATG +
Preference number: 6 (lower is better)
Translates to: CRRVSVGCYLRC*QHHLEAPALPM
Trigger: CATAGGTAATGCGGGAGCCTCTAAGTGGTGTTGCCAGCATCTCAGATAGCATCCGACACTGACTCTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478527.1
CDS TCA 72 bp TTCAAGGCAGGAGGCAAAATGCATTGCATGTTAAGATaGCGAAGAAAGCCCGTGTTGCAGGCTGATCCCAGG +
Preference number: 6 (lower is better)
Translates to: FKAGGKMHCMLR*RRKPVLQADPR
Trigger: CCTGGGATCAGCCTGCAACACGGGCTTTCTTCGTCATCTTAACATGCAATGCATTTTGCCTCCTGCCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466611.1
CDS CCA 72 bp GCGGTAAACTTCTTCAGGTTCGTTATGTGTCCATGGTaGACTCCGTGGAAATCTGGGGCAATAGTGACCACA +
Preference number: 6 (lower is better)
Translates to: AVNFFRFVMCPW*TPWKSGAIVTT
Trigger: TGTGGTCACTATTGCCCCAGATTTCCACGGAGTCCACCATGGACACATAACGAACCTGAAGAAGTTTACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp ACTAACAGGGGCACAGTAACGGAGAAAACCGCGGACTaGCTAACACCAAACGTCTCAGTACTCACATCACTT +
Preference number: 6 (lower is better)
Translates to: TNRGTVTEKTAD*LTPNVSVLTSL
Trigger: AAGTGATGTGAGTACTGAGACGTTTGGTGTTAGCCAGTCCGCGGTTTTCTCCGTTACTGTGCCCCTGTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484011.1
CDS CAA 72 bp AGACGGACTGTAGGGGCTCGGCCCAACAATGTTCACTaGCTTCATTCGAAATCTGTAGTGAGTGTAGGGTGT +
Preference number: 6 (lower is better)
Translates to: RRTVGARPNNVH*LHSKSVVSVGC
Trigger: ACACCCTACACTCACTACAGATTTCGAATGAAGCAAGTGAACATTGTTGGGCCGAGCCCCTACAGTCCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 72 bp AAATCTGTGAGCTCAGCATGTAAAGCTATAGGGTTTTaGAGCGTCTTGGCCTCAGTGCCTGACCCGGCTTCA +
Preference number: 6 (lower is better)
Translates to: KSVSSACKAIGF*SVLASVPDPAS
Trigger: TGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTCACAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389531.7
CDS TCA 72 bp GTGATGGGCAGCAGGTTTAGAATCGCTGCACGTCCTTaGGAAACTGTTTTCCTCTGGTCCGTATCCATGAAA +
Preference number: 6 (lower is better)
Translates to: VMGSRFRIAARP*ETVFLWSVSMK
Trigger: TTTCATGGATACGGACCAGAGGAAAACAGTTTCTCAAGGACGTGCAGCGATTCTAAACCTGCTGCCCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 72 bp CCATGGCAACAGCCCCCTCTTGCTGAACCTGCTGACTaGGAACTTCTATGGATGTCAAACCTTCAGAGAAAT +
Preference number: 6 (lower is better)
Translates to: PWQQPPLAEPAD*ELLWMSNLQRN
Trigger: ATTTCTCTGAAGGTTTGACATCCATAGAAGTTCCAAGTCAGCAGGTTCAGCAAGAGGGGGCTGTTGCCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466611.1
CDS CAA 90 bp TACTTCTTTAAATCTGTGAGCTCAGCATGTAAAGCTATAGGGTTTTaGAGCGTCTTGGCCTCAGTGCCTGACCCGGCTTCATACTCCAGC +
Preference number: 6 (lower is better)
Translates to: YFFKSVSSACKAIGF*SVLASVPDPASYSS
Trigger: GCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTCACAGATTTAAAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389531.7
CDS GCA 72 bp ACGCTATTTTGTTTCTGCAGAAGAGTCAGTGTCGGATaGTATCTGAGATGCTGGCAACACCACTTAGAGGCT +
Preference number: 6 (lower is better)
Translates to: TLFCFCRRVSVG*YLRCWQHHLEA
Trigger: AGCCTCTAAGTGGTGTTGCCAGCATCTCAGATAGCATCCGACACTGACTCTTCTGCAGAAACAAAATAGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478527.1
CDS CAA 72 bp CATCGGATCCTCATTCAAGGCAGGAGGCAAAATGCATaGCATGTTAAGATGACGAAGAAAGCCCGTGTTGCA +
Preference number: 6 (lower is better)
Translates to: HRILIQGRRQNA*HVKMTKKARVA
Trigger: TGCAACACGGGCTTTCTTCGTCATCTTAACATGCAATGCATTTTGCCTCCTGCCTTGAATGAGGATCCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466611.1
CDS TCA 72 bp TTGACATCCGATGTCCACAGTTTCTTCTACTTCAGCTaGAATCCGACTCTCGGGCTCAGCAGTAAAATATGG +
Preference number: 6 (lower is better)
Translates to: LTSDVHSFFYFS*NPTLGLSSKIW
Trigger: CCATATTTTACTGCTGAGCCCGAGAGTCGGATTTCAGCTGAAGTAGAAGAAACTGTGGACATCGGATGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CCA 72 bp GATGATTGTAGAACAACGTGCTCAATGCTACTGAACTaGACACTTGAAATGGTCATAGTGGGAAACGTTAGG +
Preference number: 6 (lower is better)
Translates to: DDCRTTCSMLLN*TLEMVIVGNVR
Trigger: CCTAACGTTTCCCACTATGACCATTTCAAGTGTCCAGTTCAGTAGCATTGAGCACGTTGTTCTACAATCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467827.1
CDS CAA 90 bp CCTTCATTTGCCGAGTTACAAATAAAGCCACTGAAATACGCTATTTaGTTTCTGCAGAAGAGTCAGTGTCGGATGCTATCTGAGATGCTG +
Preference number: 6 (lower is better)
Translates to: PSFAELQIKPLKYAI*FLQKSQCRMLSEML
Trigger: CAGCATCTCAGATAGCATCCGACACTGACTCTTCTGCAGAAACAAAATAGCGTATTTCAGTGGCTTTATTTGTAACTCGGCAAATGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478527.1
CDS TCA 72 bp ATCCATGAAACTTCCCATATATGCGACTTGAACTTCTaGTTTTCTTTGCAGGAGTGCTCCCATTCTGTTTCG +
Preference number: 6 (lower is better)
Translates to: IHETSHICDLNF*FSLQECSHSVS
Trigger: CGAAACAGAATGGGAGCACTCCTGCAAAGAAAATCAGAAGTTCAAGTCGCATATATGGGAAGTTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389531.7
ENST00000404826.7
ENST00000615806.4
CDS CAA 72 bp GCCGAGTTACAAATAAAGCCACTGAAATACGCTATTTaGTTTCTGCAGAAGAGTCAGTGTCGGATGCTATCT +
Preference number: 6 (lower is better)
Translates to: AELQIKPLKYAI*FLQKSQCRMLS
Trigger: AGATAGCATCCGACACTGACTCTTCTGCAGAAACAAAATAGCGTATTTCAGTGGCTTTATTTGTAACTCGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478527.1
CDS GCA 72 bp AAGGATTTCGAAGGTAAACTCAACCTCACCTTCATTTaGCGAGTTACAAATAAAGCCACTGAAATACGCTAT +
Preference number: 6 (lower is better)
Translates to: KDFEGKLNLTFI*RVTNKATEIRY
Trigger: ATAGCGTATTTCAGTGGCTTTATTTGTAACTCGGCAAATGAAGGTGAGGTTGAGTTTACCTTCGAAATCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478527.1