Pregenerated sensors for SDHB (Homo sapiens)
Ensembl gene IDs: ENSG00000117118Ensembl transcript IDs: ENST00000375499.8, ENST00000463045.2, ENST00000466613.2, ENST00000475506.1, ENST00000485092.5, ENST00000485515.5, ENST00000491274.5
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTGGGCTCCTCGGGAGGCCTGCAGGCAGGCTCCGCCAAGGGTTGTaGCCGGCAACCGGCGCCTCAAGGAGAGGGCGACCACCGCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: SGLLGRPAGRLRQGL*PATGASRRGRPPPP Trigger: TGGCGGCGGTGGTCGCCCTCTCCTTGAGGCGCCGGTTGCCGGCCACAACCCTTGGCGGAGCCTGCCTGCAGGCCTCCCGAGGAGCCCAGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375499.8 ENST00000466613.2 |
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| CDS GCA 90 bp | GTCCCATCGATAGATGGCAAATTTCTTGATACGGGGAGCTGTGGCTaGAGCTGTCTGGGCTCCTCGGGAGGCCTGCAGGCAGGCTCCGCC | + |
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Preference number: 5 (lower is better) Translates to: VPSIDGKFLDTGSCG*SCLGSSGGLQAGSA Trigger: GGCGGAGCCTGCCTGCAGGCCTCCCGAGGAGCCCAGACAGCTGCAGCCACAGCTCCCCGTATCAAGAAATTTGCCATCTATCGATGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375499.8 ENST00000466613.2 ENST00000485515.5 |
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| CDS TCA 90 bp | CTCAGCAGCATGGAAGGTGCCAGCCAGCAGGTCCTAGCTAGGCCTTaGAGCGTGGAGCAGCTCACAGGGACCGCCAGATGCAGTAACCAC | + |
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Preference number: 5 (lower is better) Translates to: LSSMEGASQQVLARP*SVEQLTGTARCSNH Trigger: GTGGTTACTGCATCTGGCGGTCCCTGTGAGCTGCTCCACGCTTCAAGGCCTAGCTAGGACCTGCTGGCTGGCACCTTCCATGCTGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS TCA 90 bp | TGTCTCCAGCCTTGTCTGGGTCCCATCGATAGATGGCAAATTTCTTaGTACGGGGAGCTGTGGCTGCAGCTGTCTGGGCTCCTCGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: CLQPCLGPIDRWQIS*YGELWLQLSGLLGR Trigger: CCTCCCGAGGAGCCCAGACAGCTGCAGCCACAGCTCCCCGTATCAAGAAATTTGCCATCTATCGATGGGACCCAGACAAGGCTGGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375499.8 ENST00000463045.2 ENST00000466613.2 ENST00000485515.5 ENST00000491274.5 |
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| CDS GCA 90 bp | GTCCCATCGATAGATGGCAAATTTCTTGATACGGGGAGCTGTGGCTaGAGCTGTCTGGGCTCCTCGGGAGGCAGGCAGAATTGTGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: VPSIDGKFLDTGSCG*SCLGSSGGRQNCGS Trigger: TGAACCACAATTCTGCCTGCCTCCCGAGGAGCCCAGACAGCTGCAGCCACAGCTCCCCGTATCAAGAAATTTGCCATCTATCGATGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463045.2 |
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| CDS TCA 90 bp | AGCCAATCCAGAACACAGCTACCAAGGACATGTCATGCTGGGAGCTaGGGGAGACTCACACATCTCCCCTGCTGGACAAGCATAAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: SQSRTQLPRTCHAGS*GRLTHLPCWTSISA Trigger: GGCACTTATGCTTGTCCAGCAGGGGAGATGTGTGAGTCTCCCTCAGCTCCCAGCATGACATGTCCTTGGTAGCTGTGTTCTGGATTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS TCA 90 bp | AGTCAATCATCCAGCGATAGGCCTGGAAAACCAGGGATGATTAGCTaGGCTGCCAATCAACAGGCCAGAGCGGCACCCTGGCTCAACTCA | + |
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Preference number: 5 (lower is better) Translates to: SQSSSDRPGKPGMIS*AANQQARAAPWLNS Trigger: TGAGTTGAGCCAGGGTGCCGCTCTGGCCTGTTGATTGGCAGCTCAGCTAATCATCCCTGGTTTTCCAGGCCTATCGCTGGATGATTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485092.5 |
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| CDS GCA 90 bp | ACACTGTACCAGCCAATCCAGAACACAGCTACCAAGGACATGTCATaGTGGGAGCTGAGGGAGACTCACACATCTCCCCTGCTGGACAAG | + |
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Preference number: 5 (lower is better) Translates to: TLYQPIQNTATKDMS*WELRETHTSPLLDK Trigger: CTTGTCCAGCAGGGGAGATGTGTGAGTCTCCCTCAGCTCCCAGCATGACATGTCCTTGGTAGCTGTGTTCTGGATTGGCTGGTACAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS CCA 90 bp | CTGTACCAGCCAATCCAGAACACAGCTACCAAGGACATGTCATGCTaGGAGCTGAGGGAGACTCACACATCTCCCCTGCTGGACAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LYQPIQNTATKDMSC*ELRETHTSPLLDKH Trigger: ATGCTTGTCCAGCAGGGGAGATGTGTGAGTCTCCCTCAGCTCCCAGCATGACATGTCCTTGGTAGCTGTGTTCTGGATTGGCTGGTACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS TCA 90 bp | CTCAAATGGGCTCATGTGGCACCAGCAGCACAAGTAACCACATGCTaGGGGAGACACTGTACCAGCCAATCCAGAACACAGCTACCAAGG | + |
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Preference number: 5 (lower is better) Translates to: LKWAHVAPAAQVTTC*GRHCTSQSRTQLPR Trigger: CCTTGGTAGCTGTGTTCTGGATTGGCTGGTACAGTGTCTCCCTCAGCATGTGGTTACTTGTGCTGCTGGTGCCACATGAGCCCATTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS GCA 90 bp | GTCCCATCGATAGATGGCAAATTTCTTGATACGGGGAGCTGTGGCTaGAGCTGTCTGGGCTCCTCGGGAGGCTTTGTAGTGAACAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: VPSIDGKFLDTGSCG*SCLGSSGGFVVNKS Trigger: ACTCTTGTTCACTACAAAGCCTCCCGAGGAGCCCAGACAGCTGCAGCCACAGCTCCCCGTATCAAGAAATTTGCCATCTATCGATGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491274.5 |
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| CDS GCA 90 bp | GAGCTGAGGGAGACTCACACATCTCCCCTGCTGGACAAGCATAAGTaGCAGACAGAAACTCTCCACTGCTCCCTTAATAAAAGAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: ELRETHTSPLLDKHK*QTETLHCSLNKRAQ Trigger: CTGAGCTCTTTTATTAAGGGAGCAGTGGAGAGTTTCTGTCTGGCACTTATGCTTGTCCAGCAGGGGAGATGTGTGAGTCTCCCTCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS CCA 90 bp | ATCAGCTTTGGCCAGCCCAAGCCTCTTTGGAAGACCACAAGTATCTaGAGCCCAACAGGAATGAAATGCTCACCTTCTCTGCATGATCTT | + |
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Preference number: 5 (lower is better) Translates to: ISFGQPKPLWKTTSI*SPTGMKCSPSLHDL Trigger: AAGATCATGCAGAGAAGGTGAGCATTTCATTCCTGTTGGGCTCCAGATACTTGTGGTCTTCCAAAGAGGCTTGGGCTGGCCAAAGCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS TCA 90 bp | TTATCACATACATGTGTGGAAGAGGGTAGATTTTTGAGACCTTATTaGGGTTGGTGTCAATCCTTCGGGTGCAAGCTAGAGTGTTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: LSHTCVEEGRFLRPY*GWCQSFGCKLECCL Trigger: GAGGCAACACTCTAGCTTGCACCCGAAGGATTGACACCAACCTCAATAAGGTCTCAAAAATCTACCCTCTTCCACACATGTATGTGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000375499.8 ENST00000463045.2 ENST00000475506.1 ENST00000491274.5 |
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| CDS TCA 90 bp | CCTGAACCTGAATGTTACCCACAGGTAACACACCAAGCTCATTACTaGATTCTTTTGAGGTGGCTTTTGTGGGTATACATGTACATTCCC | + |
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Preference number: 5 (lower is better) Translates to: PEPECYPQVTHQAHY*ILLRWLLWVYMYIP Trigger: GGGAATGTACATGTATACCCACAAAAGCCACCTCAAAAGAATTCAGTAATGAGCTTGGTGTGTTACCTGTGGGTAACATTCAGGTTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463045.2 |
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| CDS CCA 90 bp | TTGATCCATACTGCACCTGGTACCCGGGTGCTTAATTATACACACTaGGTATCATCTCCTAATTATTTCACATTGCTCAATAGCTTCCTA | + |
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Preference number: 5 (lower is better) Translates to: LIHTAPGTRVLNYTH*VSSPNYFTLLNSFL Trigger: TAGGAAGCTATTGAGCAATGTGAAATAATTAGGAGATGATACCCAGTGTGTATAATTAAGCACCCGGGTACCAGGTGCAGTATGGATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485092.5 |
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| CDS CCA 72 bp | CTCGGGAGGCCTGCAGGCAGGCTCCGCCAAGGGTTGTaGCCGGCAACCGGCGCCTCAAGGAGAGGGCGACCA | + |
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Preference number: 6 (lower is better) Translates to: LGRPAGRLRQGL*PATGASRRGRP Trigger: TGGTCGCCCTCTCCTTGAGGCGCCGGTTGCCGGCCACAACCCTTGGCGGAGCCTGCCTGCAGGCCTCCCGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375499.8 ENST00000466613.2 |
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| CDS TCA 72 bp | ATGGAAGGTGCCAGCCAGCAGGTCCTAGCTAGGCCTTaGAGCGTGGAGCAGCTCACAGGGACCGCCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: MEGASQQVLARP*SVEQLTGTARC Trigger: GCATCTGGCGGTCCCTGTGAGCTGCTCCACGCTTCAAGGCCTAGCTAGGACCTGCTGGCTGGCACCTTCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS TCA 72 bp | TCCAGCGATAGGCCTGGAAAACCAGGGATGATTAGCTaGGCTGCCAATCAACAGGCCAGAGCGGCACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSDRPGKPGMIS*AANQQARAAPW Trigger: CCAGGGTGCCGCTCTGGCCTGTTGATTGGCAGCTCAGCTAATCATCCCTGGTTTTCCAGGCCTATCGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485092.5 |
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| CDS GCA 72 bp | ATAGATGGCAAATTTCTTGATACGGGGAGCTGTGGCTaGAGCTGTCTGGGCTCCTCGGGAGGCCTGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: IDGKFLDTGSCG*SCLGSSGGLQA Trigger: TGCCTGCAGGCCTCCCGAGGAGCCCAGACAGCTGCAGCCACAGCTCCCCGTATCAAGAAATTTGCCATCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375499.8 ENST00000466613.2 ENST00000485515.5 |
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| CDS TCA 72 bp | AGAACACAGCTACCAAGGACATGTCATGCTGGGAGCTaGGGGAGACTCACACATCTCCCCTGCTGGACAAGC | + |
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Preference number: 6 (lower is better) Translates to: RTQLPRTCHAGS*GRLTHLPCWTS Trigger: GCTTGTCCAGCAGGGGAGATGTGTGAGTCTCCCTCAGCTCCCAGCATGACATGTCCTTGGTAGCTGTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS GCA 72 bp | CAGCCAATCCAGAACACAGCTACCAAGGACATGTCATaGTGGGAGCTGAGGGAGACTCACACATCTCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: QPIQNTATKDMS*WELRETHTSPL Trigger: CAGGGGAGATGTGTGAGTCTCCCTCAGCTCCCAGCATGACATGTCCTTGGTAGCTGTGTTCTGGATTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS GCA 72 bp | ATAGATGGCAAATTTCTTGATACGGGGAGCTGTGGCTaGAGCTGTCTGGGCTCCTCGGGAGGCAGGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: IDGKFLDTGSCG*SCLGSSGGRQN Trigger: ATTCTGCCTGCCTCCCGAGGAGCCCAGACAGCTGCAGCCACAGCTCCCCGTATCAAGAAATTTGCCATCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463045.2 |
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| CDS TCA 72 bp | GCTCATGTGGCACCAGCAGCACAAGTAACCACATGCTaGGGGAGACACTGTACCAGCCAATCCAGAACACAG | + |
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Preference number: 6 (lower is better) Translates to: AHVAPAAQVTTC*GRHCTSQSRTQ Trigger: CTGTGTTCTGGATTGGCTGGTACAGTGTCTCCCTCAGCATGTGGTTACTTGTGCTGCTGGTGCCACATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS TCA 72 bp | GTCAATCATCCAGCGATAGGCCTGGAAAACCAGGGATaGTTAGCTGAGCTGCCAATCAACAGGCCAGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: VNHPAIGLENQG*LAELPINRPER Trigger: CCGCTCTGGCCTGTTGATTGGCAGCTCAGCTAATCATCCCTGGTTTTCCAGGCCTATCGCTGGATGATTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485092.5 |
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| CDS GCA 72 bp | ATAGATGGCAAATTTCTTGATACGGGGAGCTGTGGCTaGAGCTGTCTGGGCTCCTCGGGAGGCTTTGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: IDGKFLDTGSCG*SCLGSSGGFVV Trigger: CACTACAAAGCCTCCCGAGGAGCCCAGACAGCTGCAGCCACAGCTCCCCGTATCAAGAAATTTGCCATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491274.5 |
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| CDS CCA 72 bp | GGCCAGCCCAAGCCTCTTTGGAAGACCACAAGTATCTaGAGCCCAACAGGAATGAAATGCTCACCTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GQPKPLWKTTSI*SPTGMKCSPSL Trigger: CAGAGAAGGTGAGCATTTCATTCCTGTTGGGCTCCAGATACTTGTGGTCTTCCAAAGAGGCTTGGGCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS CCA 72 bp | ACTCGTAGAGCCCGTCCAGTTTCTCACGCTCTTCTATaGACTGCAGATACTGCTGCTTGCCTTCCTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: TRRARPVSHALL*TADTAACLPEI Trigger: AATCTCAGGAAGGCAAGCAGCAGTATCTGCAGTCCATAGAAGAGCGTGAGAAACTGGACGGGCTCTACGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000375499.8 ENST00000485515.5 ENST00000491274.5 |
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| CDS CCA 72 bp | GATGTCTCTATCAGCTTTGGCCAGCCCAAGCCTCTTTaGAAGACCACAAGTATCTGGAGCCCAACAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: DVSISFGQPKPL*KTTSIWSPTGM Trigger: CATTCCTGTTGGGCTCCAGATACTTGTGGTCTTCCAAAGAGGCTTGGGCTGGCCAAAGCTGATAGAGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS CAA 72 bp | AGGTTGGTGTCAATCCTTCGGGTGCAAGCTAGAGTGTaGCCTCCATTGATGTTCATTGCACAAGAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: RLVSILRVQARV*PPLMFIAQEPQ Trigger: CTGTGGCTCTTGTGCAATGAACATCAATGGAGGCAACACTCTAGCTTGCACCCGAAGGATTGACACCAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000375499.8 ENST00000463045.2 ENST00000475506.1 ENST00000485515.5 ENST00000491274.5 |
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| CDS CAA 72 bp | AGATGTCTCTATCAGCTTTGGCCAGCCCAAGCCTCTTaGGAAGACCACAAGTATCTGGAGCCCAACAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: RCLYQLWPAQAS*EDHKYLEPNRN Trigger: ATTCCTGTTGGGCTCCAGATACTTGTGGTCTTCCAAAGAGGCTTGGGCTGGCCAAAGCTGATAGAGACATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS CAA 90 bp | AGGTTGGTGTCAATCCTTCGGGTGCAAGCTAGAGTGTTGCCTCCATaGATGTTCATTGCACAAGAGCCACAGATGCCTTCTCTGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: RLVSILRVQARVLPP*MFIAQEPQMPSLHD Trigger: ATCATGCAGAGAAGGCATCTGTGGCTCTTGTGCAATGAACATCAATGGAGGCAACACTCTAGCTTGCACCCGAAGGATTGACACCAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000375499.8 ENST00000463045.2 ENST00000475506.1 ENST00000485515.5 ENST00000491274.5 |
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| CDS GCA 72 bp | CTGGACAAGCATAAGTGCCAGACAGAAACTCTCCACTaGTCCCTTAATAAAAGAGCTCAGCAGCATGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LDKHKCQTETLH*SLNKRAQQHGR Trigger: CCTTCCATGCTGCTGAGCTCTTTTATTAAGGGAGCAGTGGAGAGTTTCTGTCTGGCACTTATGCTTGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS CAA 72 bp | TCAATCCTTCGGGTGCAAGCTAGAGTGTTGCCTCCATaGATGTTCATTGCACAAGAGCCACAGATGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SILRVQARVLPP*MFIAQEPQMPS Trigger: AGAAGGCATCTGTGGCTCTTGTGCAATGAACATCAATGGAGGCAACACTCTAGCTTGCACCCGAAGGATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000375499.8 ENST00000463045.2 ENST00000475506.1 ENST00000485515.5 ENST00000491274.5 |
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| CDS CAA 90 bp | ACCTTATTGAGGTTGGTGTCAATCCTTCGGGTGCAAGCTAGAGTGTaGCCTCCATTGATGTTCATTGCACAAGAGCCACAGATGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TLLRLVSILRVQARV*PPLMFIAQEPQMPS Trigger: AGAAGGCATCTGTGGCTCTTGTGCAATGAACATCAATGGAGGCAACACTCTAGCTTGCACCCGAAGGATTGACACCAACCTCAATAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000375499.8 ENST00000463045.2 ENST00000475506.1 ENST00000491274.5 |
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| CDS CAA 90 bp | TCCTTATTGAGGTTGGTGTCAATCCTTCGGGTGCAAGCTAGAGTGTaGCCTCCATTGATGTTCATTGCACAAGAGCCACAGATGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLLRLVSILRVQARV*PPLMFIAQEPQMPS Trigger: AGAAGGCATCTGTGGCTCTTGTGCAATGAACATCAATGGAGGCAACACTCTAGCTTGCACCCGAAGGATTGACACCAACCTCAATAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485515.5 |
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| CDS TCA 72 bp | TTTGGAAGACCACAAGTATCTGGAGCCCAACAGGAATaGAATGCTCACCTTCTCTGCATGATCTTCGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: FGRPQVSGAQQE*NAHLLCMIFGR Trigger: CCTTCCGAAGATCATGCAGAGAAGGTGAGCATTTCATTCCTGTTGGGCTCCAGATACTTGTGGTCTTCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS TCA 72 bp | ACATGTGTGGAAGAGGGTAGATTTTTGAGACCTTATTaGGGTTGGTGTCAATCCTTCGGGTGCAAGCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: TCVEEGRFLRPY*GWCQSFGCKLE Trigger: CTCTAGCTTGCACCCGAAGGATTGACACCAACCTCAATAAGGTCTCAAAAATCTACCCTCTTCCACACATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000375499.8 ENST00000463045.2 ENST00000475506.1 ENST00000491274.5 |
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| CDS TCA 72 bp | GAGCCCAACAGGAATGAAATGCTCACCTTCTCTGCATaGTCTTCGGAAGGTCAAAGTAGAGTCAACTTCATT | + |
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Preference number: 6 (lower is better) Translates to: EPNRNEMLTFSA*SSEGQSRVNFI Trigger: AATGAAGTTGACTCTACTTTGACCTTCCGAAGATCATGCAGAGAAGGTGAGCATTTCATTCCTGTTGGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466613.2 |
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| CDS TCA 72 bp | CTTTATCACATACATGTGTGGAAGAGGGTAGATTTTTaGGACCTTATTGAGGTTGGTGTCAATCCTTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: LYHIHVWKRVDF*DLIEVGVNPSG Trigger: ACCCGAAGGATTGACACCAACCTCAATAAGGTCTCAAAAATCTACCCTCTTCCACACATGTATGTGATAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000375499.8 ENST00000463045.2 ENST00000475506.1 ENST00000491274.5 |
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| CDS TCA 72 bp | GAATGTTACCCACAGGTAACACACCAAGCTCATTACTaGATTCTTTTGAGGTGGCTTTTGTGGGTATACATG | + |
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Preference number: 6 (lower is better) Translates to: ECYPQVTHQAHY*ILLRWLLWVYM Trigger: CATGTATACCCACAAAAGCCACCTCAAAAGAATTCAGTAATGAGCTTGGTGTGTTACCTGTGGGTAACATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463045.2 |
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| CDS CCA 72 bp | ACTGCACCTGGTACCCGGGTGCTTAATTATACACACTaGGTATCATCTCCTAATTATTTCACATTGCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: TAPGTRVLNYTH*VSSPNYFTLLN Trigger: ATTGAGCAATGTGAAATAATTAGGAGATGATACCCAGTGTGTATAATTAAGCACCCGGGTACCAGGTGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485092.5 |
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