Pregenerated sensors for SDHAF3 (Homo sapiens)
Ensembl gene IDs: ENSG00000196636Ensembl transcript IDs: ENST00000360382.4, ENST00000432641.3, ENST00000489852.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAGACTCAGAAATACTAAATTGCCTATTGGGTTTTGTGGCTTCTTaGATCAGCTCCTGCAACTGTCCAATTTGTTCATCACGAAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: IDSEILNCLLGFVAS*ISSCNCPICSSRKS Trigger: TGACTTTCGTGATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAGTATTTCTGAGTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| 3UTR GCA 90 bp | ATACTAAATTGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTaGAACTGTCCAATTTGTTCATCACGAAAGTCATTAAGTTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: ILNCLLGFVASCISS*NCPICSSRKSLSFS Trigger: AGAAAAACTTAATGACTTTCGTGATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGCGCTGTTGCATACACTaGAAGTACCAAATCGGAATT | + |
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Preference number: 2 (lower is better) Translates to: LPIGFCGFLHQLLQLSNLRCCIH*KYQIGI Trigger: AATTCCGATTTGGTACTTTCAGTGTATGCAACAGCG...CAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| 3UTR CAA 90 bp | CATAGACTCAGAAATACTAAATTGCCTATTGGGTTTTGTGGCTTCTaGCATCAGCTCCTGCAACTGTCCAATTTGTTCATCACGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: HRLRNTKLPIGFCGF*HQLLQLSNLFITKV Trigger: GACTTTCGTGATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAGTATTTCTGAGTCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| 3UTR GCA 72 bp | TGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTaGAACTGTCCAATTTGTTCATCACGAAAGTCATTA | + |
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Preference number: 3 (lower is better) Translates to: CLLGFVASCISS*NCPICSSRKSL Trigger: TAATGACTTTCGTGATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| 3UTR GCA 72 bp | GAAATACTAAATTGCCTATTGGGTTTTGTGGCTTCTTaGATCAGCTCCTGCAACTGTCCAATTTGTTCATCA | + |
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Preference number: 3 (lower is better) Translates to: EILNCLLGFVAS*ISSCNCPICSS Trigger: TGATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAGTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR GCA 90 bp | TGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGTGGGGGCAGAACACGGTaGAGCTGCAAGACGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: CLLGFVASCISSCNCPICGGRTR*SCKTRL Trigger: CAAGCGCGTCTTGCAGCTGCACCGTGTTCTGCCCCC...ACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CCA 90 bp | TTGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGTCGTCTTTCACGTACTaGTCGCCCAGGGATTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LPIGFCGFLHQLLQLSNLSSFTY*SPRDLR Trigger: CCTCAAATCCCTGGGCGACCAGTACGTGAAAGACGA...CAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR GCA 90 bp | CTAAATTGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAAGAACACGGTGCAGCTaGAAGACGCGCTTGTACAAT | + |
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Preference number: 4 (lower is better) Translates to: LNCLLGFVASCISSCNCPRTRCS*KTRLYN Trigger: ATTGTACAAGCGCGTCTTGCAGCTGCACCGTGTTCT...TGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR GCA 90 bp | TTTTGTCTGTTTTCGTTAGCCTGTTGCAATAACGCTGTTGCATACACTGAAAGTGACGCGCTTGTACAATaGCCGGACTCGAGAAACGTG | + |
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Preference number: 4 (lower is better) Translates to: FCLFSLACCNNAVAYTESDALVQ*PDSRNV Trigger: CACGTTTCTCGAGTCCGGGCATTGTACAAGCGCGTC...ACTTTCAGTGTATGCAACAGCGTTATTGCAACAGGCTAACGAAAACAGACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR GCA 90 bp | TATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGTTCATTTGCAAGAAACGCTGTaGCTCGTCAGAACCAACGGT | + |
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Preference number: 4 (lower is better) Translates to: YWVLWLLASAPATVQFVHLQETL*LVRTNG Trigger: ACCGTTGGTTCTGACGAGGCACAGCGTTTCTTGCAA...ATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR GCA 90 bp | CTGTTTTCGTTAGCCTGTTGCAATAACGCTGTTGCATACACTGAAAGTACCAAAATACCCTCCCATTCTTaGAAGAAACGCTGTGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: LFSLACCNNAVAYTESTKIPSHS*KKRCAS Trigger: CGAGGCACAGCGTTTCTTGCAAGAATGGGAGGGTAT...TTTGGTACTTTCAGTGTATGCAACAGCGTTATTGCAACAGGCTAACGAAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR GCA 90 bp | TGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGTTTTTCGTTAGCCTGTTaGAATAACGCTGTTGCATAC | + |
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Preference number: 4 (lower is better) Translates to: CLLGFVASCISSCNCPICFSLAC*NNAVAY Trigger: GTATGCAACAGCGTTATTGCAACAGGCTAACGAAAA...ACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR GCA 90 bp | CTGTTTTCGTTAGCCTGTTGCAATAACGCTGTTGCATACACTGAAAGTACCAAAGGTTTTGTGGCTTCTTaGATCAGCTCCTGCAACTGT | + |
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Preference number: 4 (lower is better) Translates to: LFSLACCNNAVAYTESTKGFVAS*ISSCNC Trigger: ACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACC...TTTGGTACTTTCAGTGTATGCAACAGCGTTATTGCAACAGGCTAACGAAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CCA 90 bp | TGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGTATGCATCAAGATTTCTaGACATACCCTCCCATTCTT | + |
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Preference number: 4 (lower is better) Translates to: CLLGFVASCISSCNCPICMHQDF*TYPPIL Trigger: AAGAATGGGAGGGTATGTCCAGAAATCTTGATGCAT...ACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR TCA 90 bp | TATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGTTCATCGCTGTTGCATACACTaGAAGTACCAAATCGGAATT | + |
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Preference number: 4 (lower is better) Translates to: YWVLWLLASAPATVQFVHRCCIH*KYQIGI Trigger: AATTCCGATTTGGTACTTTCAGTGTATGCAACAGCG...ATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR GCA 90 bp | TATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGTTCATTCTTGCATCAGCTCCTaGAACTGTCCAATTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: YWVLWLLASAPATVQFVHSCISS*NCPICS Trigger: TGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGA...ATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CCA 90 bp | TTTTGTCTGTTTTCGTTAGCCTGTTGCAATAACGCTGTTGCATACACTGAAAGTGCCTATTGGGTTTTGTaGCTTCTTGCATCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FCLFSLACCNNAVAYTESAYWVL*LLASAP Trigger: AGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGC...ACTTTCAGTGTATGCAACAGCGTTATTGCAACAGGCTAACGAAAACAGACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR GCA 90 bp | CTAAATTGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCATCAGAAATACTAAATTaGCTATTGGGTTTTGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LNCLLGFVASCISSCNCPSEILN*LLGFVA Trigger: AGCCACAAAACCCAATAGGCAATTTAGTATTTCTGA...TGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| 3UTR CAA 72 bp | TTTGGTTTCATAGACTCAGAAATACTAAATTGCCTATaGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: FGFIDSEILNCL*GFVASCISSCN Trigger: GTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAGTATTTCTGAGTCTATGAAACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CAA 90 bp | CTAAATTGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCACATACCCTCCCATTCTaGCAAGAAACGCTGTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: LNCLLGFVASCISSCNCPHTLPF*QETLCL Trigger: GAGGCACAGCGTTTCTTGCAAGAATGGGAGGGTATG...TGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CAA 90 bp | TTTTGTCTGTTTTCGTTAGCCTGTTGCAATAACGCTGTTGCATACACTGAAAGTAGCTGCAAGACGCGCTaGTACAATGCCCGGACTCGA | + |
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Preference number: 5 (lower is better) Translates to: FCLFSLACCNNAVAYTESSCKTR*YNARTR Trigger: TCGAGTCCGGGCATTGTACAAGCGCGTCTTGCAGCT...ACTTTCAGTGTATGCAACAGCGTTATTGCAACAGGCTAACGAAAACAGACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CAA 90 bp | TATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGTTCATGGGTTTTGTGGCTTCTaGCATCAGCTCCTGCAACTG | + |
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Preference number: 5 (lower is better) Translates to: YWVLWLLASAPATVQFVHGFCGF*HQLLQL Trigger: CAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCC...ATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CAA 90 bp | CTAAATTGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTGCCTATTGGGTTTaGTGGCTTCTTGCATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LNCLLGFVASCISSCNCPIAYWV*WLLASA Trigger: AGCTGATGCAAGAAGCCACAAAACCCAATAGGCAAT...TGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CAA 90 bp | TTGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGGTTGCAATAACGCTGTaGCATACACTGAAAGTACCA | + |
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Preference number: 5 (lower is better) Translates to: LPIGFCGFLHQLLQLSNLVAITL*HTLKVP Trigger: TGGTACTTTCAGTGTATGCAACAGCGTTATTGCAAC...CAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CAA 90 bp | CTAAATTGCCTATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATACTAAATTGCCTATaGGGTTTTGTGGCTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: LNCLLGFVASCISSCNCPILNCL*GFVASC Trigger: GCAAGAAGCCACAAAACCCAATAGGCAATTTAGTAT...TGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATAGGCAATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CAA 90 bp | TATTGGGTTTTGTGGCTTCTTGCATCAGCTCCTGCAACTGTCCAATTTGTTCATCTGCAACTGTCCAATTaGTTCATCACGAAAGTCATT | + |
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Preference number: 5 (lower is better) Translates to: YWVLWLLASAPATVQFVHLQLSN*FITKVI Trigger: AATGACTTTCGTGATGAACAAATTGGACAGTTGCAG...ATGAACAAATTGGACAGTTGCAGGAGCTGATGCAAGAAGCCACAAAACCCAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CAA 90 bp | TTTTGTCTGTTTTCGTTAGCCTGTTGCAATAACGCTGTTGCATACACTGAAAGTCTCAGAAATACTAAATaGCCTATTGGGTTTTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: FCLFSLACCNNAVAYTESLRNTK*PIGFCG Trigger: GCCACAAAACCCAATAGGCAATTTAGTATTTCTGAG...ACTTTCAGTGTATGCAACAGCGTTATTGCAACAGGCTAACGAAAACAGACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS-3UTR CAA 90 bp | TTTTGTCTGTTTTCGTTAGCCTGTTGCAATAACGCTGTTGCATACACTGAAAGTTTGTCACTAGTGATCTaGATCCATATACTGCAATCA | + |
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Preference number: 5 (lower is better) Translates to: FCLFSLACCNNAVAYTESLSLVI*IHILQS Trigger: TGATTGCAGTATATGGATCAAGATCACTAGTGACAA...ACTTTCAGTGTATGCAACAGCGTTATTGCAACAGGCTAACGAAAACAGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360382.4 |
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| CDS GCA 72 bp | AAGACGCGCTTGTACAATGCCCGGACTCGAGAAACGTaGCGCCCCGGCATAGCGCCCCACGCCGACCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: KTRLYNARTRET*RPGIAPHADRR Trigger: TCGGCGGTCGGCGTGGGGCGCTATGCCGGGGCGGCACGTTTCTCGAGTCCGGGCATTGTACAAGCGCGTCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432641.3 ENST00000489852.1 |
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| CDS GCA 72 bp | CAGAACACGGTGCAGCTGCAAGACGCGCTTGTACAATaGCCGGACTCGAGAAACGTGCCGCCCCGGCATAGC | + |
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Preference number: 6 (lower is better) Translates to: QNTVQLQDALVQ*PDSRNVPPRHS Trigger: GCTATGCCGGGGCGGCACGTTTCTCGAGTCCGGGCATTGTACAAGCGCGTCTTGCAGCTGCACCGTGTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432641.3 ENST00000489852.1 |
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