Pregenerated sensors for SDHAF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000205138Ensembl transcript IDs: ENST00000378887.4
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACCGGGGGTCGTCCTGGCTCCCCGTACCTTCGGGCAAGTAGCTCTTGGCTTGACCGCCCCAAGCCCTCATaGGGGAGGAGCACCGACCTG | + |
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Preference number: 2 (lower is better) Translates to: TGGRPGSPYLRASSSWLDRPKPS*GRSTDL Trigger: CAGGTCGGTGCTCCTCCCCCATGAGGGCTTGGGGCG...GTCAAGCCAAGAGCTACTTGCCCGAAGGTACGGGGAGCCAGGACGACCCCCGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTCTAGGGTCAGGCGAGCCTCCTaGCTCCACCACGCCATCGAG | + |
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Preference number: 2 (lower is better) Translates to: PSIGKGGPPLPSITGLSRVRRAS*LHHAIE Trigger: CTCGATGGCGTGGTGGAGCCAGGAGGCTCGCCTGAC...CCTAGAGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCCGCCCCAAGCCCTCATGGGGGAGGAGCACCGACCTGTCTCCAAGCATCCCAAGGAGGAGTCTCTaGCATCCCCAATTCGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: PGRPKPSWGRSTDLSPSIPRRSL*HPQFVK Trigger: CTTGACGAATTGGGGATGTCAGAGACTCCTCCTTGG...GATGCTTGGAGACAGGTCGGTGCTCCTCCCCCATGAGGGCTTGGGGCGGCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTTTTCCAGAAGGGGATTCCGGGCTTCTCACCGCTCATCAGGGCACCTTCAAGGCGGGCCTCCCTTaGCGTCCATCACGGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: ESFPEGDSGLLTAHQGTFKAGLP*RPSRGS Trigger: AGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTT...GAAGGTGCCCTGATGAGCGGTGAGAAGCCCGGAATCCCCTTCTGGAAAACTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| 3UTR CCA 72 bp | CAGCCCGCCAGCGTCCCAGGCCGCCCCAAGCCCTCATaGGGGAGGAGCACCGACCTGTCTCCAAGCATCGGA | + |
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Preference number: 3 (lower is better) Translates to: QPASVPGRPKPS*GRSTDLSPSIG Trigger: TCCGATGCTTGGAGACAGGTCGGTGCTCCTCCCCCATGAGGGCTTGGGGCGGCCTGGGACGCTGGCGGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| 3UTR CCA 72 bp | CGTCCTGGCTCCCCGTACCTTCGGGCAAGTAGCTCTTaGCTTGACACTGTCCAGCCCGCCAGCGTCCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: RPGSPYLRASSS*LDTVQPASVPG Trigger: GCCTGGGACGCTGGCGGGCTGGACAGTGTCAAGCCAAGAGCTACTTGCCCGAAGGTACGGGGAGCCAGGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR GCA 90 bp | GCCCGCCAGCGTCCCAGGCCGCCCCAAGCCCTCATGGGGGAGGAGCACCGACCTCTCTGCAGCCGGCTGTaGCGGCTCATGACCGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: ARQRPRPPQALMGEEHRPLCSRL*RLMTAA Trigger: AGCCGCGGTCATGAGCCGGCACAGCCGGCTGCAGAG...AGGTCGGTGCTCCTCCCCCATGAGGGCTTGGGGCGGCCTGGGACGCTGGCGGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | GCCCGCCAGCGTCCCAGGCCGCCCCAAGCCCTCATGGGGGAGGAGCACCGACCTGCCCCCGTGCTGTCGTaGGGGTTCCTTGGACTGTCG | + |
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Preference number: 4 (lower is better) Translates to: ARQRPRPPQALMGEEHRPAPVLS*GFLGLS Trigger: CGACAGTCCAAGGAACCCCCACGACAGCACGGGGGC...AGGTCGGTGCTCCTCCCCCATGAGGGCTTGGGGCGGCCTGGGACGCTGGCGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | GGGCCTCCCTTGCCGTCCATCACGGGGCTCTCTAGGCCCCCTGCGTCGCCAAGGCACCGGGGGTCGTCCTaGCTCCCCGTACCTTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: GPPLPSITGLSRPPASPRHRGSS*LPVPSG Trigger: GCCCGAAGGTACGGGGAGCCAGGACGACCCCCGGTG...CCTTGGCGACGCAGGGGGCCTAGAGAGCCCCGTGATGGACGGCAAGGGAGGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR GCA 90 bp | CCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTCTAGGCGCGGCAGGCCCGCATaGTGCCGGAACTCTGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: PSIGKGGPPLPSITGLSRRGRPA*CRNSAR Trigger: GCGGGCAGAGTTCCGGCAGCATGCGGGCCTGCCGCG...CCTAGAGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| 3UTR CAA 72 bp | CTGGCTCCCCGTACCTTCGGGCAAGTAGCTCTTGGCTaGACACTGTCCAGCCCGCCAGCGTCCCAGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LAPRTFGQVALG*TLSSPPASQAA Trigger: GGCGGCCTGGGACGCTGGCGGGCTGGACAGTGTCAAGCCAAGAGCTACTTGCCCGAAGGTACGGGGAGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR GCA 90 bp | GTCTCCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTCGCTCAGCGAACGACCTaGGAACCGCGGAGCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VSKHRKRRASLAVHHGALAQRTT*EPRSRH Trigger: GTGGCGGCTCCGCGGTTCGCAGGTCGTTCGCTGAGC...GAGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGGAGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | CCAAGCCCTCATGGGGGAGGAGCACCGACCTGTCTCCAAGCATCGGAAAAGGCGCCCATGGCGGTGGCGTaGCCCGAGCGTAGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSPHGGGAPTCLQASEKAPMAVA*PERSSC Trigger: GCAGCTGCTACGCTCGGGCCACGCCACCGCCATGGG...CGCCTTTTCCGATGCTTGGAGACAGGTCGGTGCTCCTCCCCCATGAGGGCTTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | AAGCCCTCATGGGGGAGGAGCACCGACCTGTCTCCAAGCATCGGAAAAGGCGGGAGGCGCCCATGGCGGTaGCGTGGCCCGAGCGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: KPSWGRSTDLSPSIGKGGRRPWR*RGPSVA Trigger: TGCTACGCTCGGGCCACGCCACCGCCATGGGCGCCT...CCCGCCTTTTCCGATGCTTGGAGACAGGTCGGTGCTCCTCCCCCATGAGGGCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR TCA 90 bp | CCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTCTAGGGGCTGTGCCGGCTCATaGCCGCGGCTAAGCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: PSIGKGGPPLPSITGLSRGCAGS*PRLSRD Trigger: GTCTCTGCTTAGCCGCGGTCATGAGCCGGCACAGCC...CCTAGAGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR GCA 90 bp | CCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTCTAGGCTCAGAACCTGCCTCTaGAGCCGGCTGTGCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSIGKGGPPLPSITGLSRLRTCL*SRLCRL Trigger: GAGCCGGCACAGCCGGCTGCAGAGGCAGGTTCTGAG...CCTAGAGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR GCA 90 bp | GTCTCCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTCTCTCCGGTGCCCCCGTaGTGTCGTGGGGGTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VSKHRKRRASLAVHHGALSPVPP*CRGGSL Trigger: CAAGGAACCCCCACGACAGCACGGGGGCACCGGAGA...GAGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGGAGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR GCA 90 bp | TGTCTCCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTAAGGCGGGCCTCCCTTaGCGTCCATCACGGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: CLQASEKAGLPCRPSRGSKAGLP*RPSRGS Trigger: AGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTT...AGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGGAGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | GTCTCCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTCGTCGTGGGGGTTCCTTaGACTGTCGCCGTCGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VSKHRKRRASLAVHHGALVVGVP*TVAVVR Trigger: CCTGACGACGGCGACAGTCCAAGGAACCCCCACGAC...GAGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR GCA 90 bp | GTTTTCCAGAAGGGGATTCCGGGCTTCTCACCGCTCATCAGGGCACCTTCCCAAGGCAGGCCCGCATGCTaGCGGAACTCTGCCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: VFQKGIPGFSPLIRAPSQGRPAC*RNSART Trigger: AGTGCGGGCAGAGTTCCGGCAGCATGCGGGCCTGCC...TTGGGAAGGTGCCCTGATGAGCGGTGAGAAGCCCGGAATCCCCTTCTGGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | ACCGGGGGTCGTCCTGGCTCCCCGTACCTTCGGGCAAGTAGCTCTTGGCTTGACCGGGCAAGTAGCTCTTaGCTTGACACTGTCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TGGRPGSPYLRASSSWLDRASSS*LDTVQP Trigger: GGGCTGGACAGTGTCAAGCCAAGAGCTACTTGCCCG...GTCAAGCCAAGAGCTACTTGCCCGAAGGTACGGGGAGCCAGGACGACCCCCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR TCA 90 bp | CCAGGCCGCCCCAAGCCCTCATGGGGGAGGAGCACCGACCTGTCTCCAAGCATCTTGGGGGTCTTCAGTTaGTCAACCAGGGTGATAGAC | + |
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Preference number: 4 (lower is better) Translates to: PGRPKPSWGRSTDLSPSILGVFS*STRVID Trigger: GTCTATCACCCTGGTTGATCAACTGAAGACCCCCAA...GATGCTTGGAGACAGGTCGGTGCTCCTCCCCCATGAGGGCTTGGGGCGGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | ATTCGTCAAGCTAGTCTCTTAAGACCTCTCACCTTAGGCGGGTTCCCCAGTCCCGTACGAAGGCGCCCATaGCGGTGGCGTGGCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: IRQASLLRPLTLGGFPSPVRRRP*RWRGPS Trigger: GCTCGGGCCACGCCACCGCCATGGGCGCCTTCGTAC...GGGACTGGGGAACCCGCCTAAGGTGAGAGGTCTTAAGAGACTAGCTTGACGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | ATTCGTCAAGCTAGTCTCTTAAGACCTCTCACCTTAGGCGGGTTCCCCAGTCCCTCGCCGTCGTCAGGCTaGCAACCCACGCCGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: IRQASLLRPLTLGGFPSPSPSSG*QPTPPG Trigger: GCCTGGCGGCGTGGGTTGCCAGCCTGACGACGGCGA...GGGACTGGGGAACCCGCCTAAGGTGAGAGGTCTTAAGAGACTAGCTTGACGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR TCA 90 bp | CGACCTGTCTCCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGCCAAGGAGGAGTCTCTaGCATCCCCAATTCGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: RPVSKHRKRRASLAVHHGPRRSL*HPQFVK Trigger: CTTGACGAATTGGGGATGTCAGAGACTCCTCCTTGG...CCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGGAGACAGGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR GCA 90 bp | GTTTTCCAGAAGGGGATTCCGGGCTTCTCACCGCTCATCAGGGCACCTTCCCAAGGTACAGGTACTCGATaGGCAGCACGTCGGACCGCG | + |
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Preference number: 4 (lower is better) Translates to: VFQKGIPGFSPLIRAPSQGTGTR*AARRTA Trigger: CGCGGTCCGACGTGCTGCGCATCGAGTACCTGTACC...TTGGGAAGGTGCCCTGATGAGCGGTGAGAAGCCCGGAATCCCCTTCTGGAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | ATTCGTCAAGCTAGTCTCTTAAGACCTCTCACCTTAGGCGGGTTCCCCAGTCCCCGCCCCAAGCCCTCATaGGGGAGGAGCACCGACCTG | + |
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Preference number: 4 (lower is better) Translates to: IRQASLLRPLTLGGFPSPRPKPS*GRSTDL Trigger: CAGGTCGGTGCTCCTCCCCCATGAGGGCTTGGGGCG...GGGACTGGGGAACCCGCCTAAGGTGAGAGGTCTTAAGAGACTAGCTTGACGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | ATTCGTCAAGCTAGTCTCTTAAGACCTCTCACCTTAGGCGGGTTCCCCAGTCCCGTCAGGCGAGCCTCCTaGCTCCACCACGCCATCGAG | + |
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Preference number: 4 (lower is better) Translates to: IRQASLLRPLTLGGFPSPVRRAS*LHHAIE Trigger: CTCGATGGCGTGGTGGAGCCAGGAGGCTCGCCTGAC...GGGACTGGGGAACCCGCCTAAGGTGAGAGGTCTTAAGAGACTAGCTTGACGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | ACCGGGGGTCGTCCTGGCTCCCCGTACCTTCGGGCAAGTAGCTCTTGGCTTGACTCAAGTAGGGGCCTTTaGGGGTCTTCAGTTGATCAA | + |
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Preference number: 4 (lower is better) Translates to: TGGRPGSPYLRASSSWLDSSRGL*GSSVDQ Trigger: TTGATCAACTGAAGACCCCCAAAGGCCCCTACTTGA...GTCAAGCCAAGAGCTACTTGCCCGAAGGTACGGGGAGCCAGGACGACCCCCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CCA 90 bp | CATCAAGTAGGGGCCTTTGGGGGTCTTCAGTTGATCAACCAGGGTGATAGACCCCCTTCCTCATGGTCCTaGCTTGTCACAATTAATGGG | + |
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Preference number: 4 (lower is better) Translates to: HQVGAFGGLQLINQGDRPPSSWS*LVTING Trigger: CCCATTAATTGTGACAAGCCAGGACCATGAGGAAGG...GGGTCTATCACCCTGGTTGATCAACTGAAGACCCCCAAAGGCCCCTACTTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR GCA 90 bp | GTTTTCCAGAAGGGGATTCCGGGCTTCTCACCGCTCATCAGGGCACCTTCCCAACAAATGAGTCAATGTTaGCCCTCAAAACCATCAAGT | + |
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Preference number: 4 (lower is better) Translates to: VFQKGIPGFSPLIRAPSQQMSQC*PSKPSS Trigger: ACTTGATGGTTTTGAGGGGCAACATTGACTCATTTG...TTGGGAAGGTGCCCTGATGAGCGGTGAGAAGCCCGGAATCCCCTTCTGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 90 bp | GCGCAGCACGTCGGACCGCGGCAGGCCCGCATGCTGCCGGAACTCTaGCCGCACTCGCGCCTCGGCGCCCGGCTTCCCACGCCCGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: AQHVGPRQARMLPEL*PHSRLGARLPTPGA Trigger: CGCGCCGGGCGTGGGAAGCCGGGCGCCGAGGCGCGAGTGCGGGCAGAGTTCCGGCAGCATGCGGGCCTGCCGCGGTCCGACGTGCTGCGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS CCA 90 bp | CGCCAGGCTCCCCGGTCGGGGCCCGCGGGCGTACGAAGGCGCCCATaGCGGTGGCGTGGCCCGAGCGTAGCAGCTGCAGCTGGCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: RQAPRSGPAGVRRRP*RWRGPSVAAAAGAA Trigger: GGCGGCGCCAGCTGCAGCTGCTACGCTCGGGCCACGCCACCGCCATGGGCGCCTTCGTACGCCCGCGGGCCCCGACCGGGGAGCCTGGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 90 bp | CGTACGAAGGCGCCCATGGCGGTGGCGTGGCCCGAGCGTAGCAGCTaGAGCTGGCGCCGCCCGCGGCGGTACAGGTACTCGATGCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RTKAPMAVAWPERSS*SWRRPRRYRYSMRS Trigger: GCTGCGCATCGAGTACCTGTACCGCCGCGGGCGGCGCCAGCTGCAGCTGCTACGCTCGGGCCACGCCACCGCCATGGGCGCCTTCGTACG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 90 bp | TACAGGTACTCGATGCGCAGCACGTCGGACCGCGGCAGGCCCGCATaGTGCCGGAACTCTGCCCGCACTCGCGCCTCGGCGCCCGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: YRYSMRSTSDRGRPA*CRNSARTRASAPGF Trigger: GAAGCCGGGCGCCGAGGCGCGAGTGCGGGCAGAGTTCCGGCAGCATGCGGGCCTGCCGCGGTCCGACGTGCTGCGCATCGAGTACCTGTA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 90 bp | GTAGCAGCTGCAGCTGGCGCCGCCCGCGGCGGTACAGGTACTCGATaGGCAGCACGTCGGACCGCGGCAGGCCCGCATGCTGCCGGAACT | + |
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Preference number: 5 (lower is better) Translates to: VAAAAGAARGGTGTR*AARRTAAGPHAAGT Trigger: AGTTCCGGCAGCATGCGGGCCTGCCGCGGTCCGACGTGCTGCGCATCGAGTACCTGTACCGCCGCGGGCGGCGCCAGCTGCAGCTGCTAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 90 bp | TTCCCACGCCCGGCGCGCAGCAGATCGCGGTACAGGCTCAGAACCTaGCTCTGCAGCCGGCTGTGCCGGCTCATGACCGCGGCTAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: FPRPARSRSRYRLRT*LCSRLCRLMTAAKQ Trigger: CTGCTTAGCCGCGGTCATGAGCCGGCACAGCCGGCTGCAGAGGCAGGTTCTGAGCCTGTACCGCGATCTGCTGCGCGCCGGGCGTGGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CAA 90 bp | CGACCTGTCTCCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGAAAGGCGGGCCTCCCTaGCCGTCCATCACGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: RPVSKHRKRRASLAVHHGKGGPP*PSITGL Trigger: GAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTT...CCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGGAGACAGGTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS TCA 90 bp | GGTACAGGCTCAGAACCTGCCTCTGCAGCCGGCTGTGCCGGCTCATaGCCGCGGCTAAGCAGAGACGCTCAGCGAACGACCTGCGAACCG | + |
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Preference number: 5 (lower is better) Translates to: GTGSEPASAAGCAGS*PRLSRDAQRTTCEP Trigger: CGGTTCGCAGGTCGTTCGCTGAGCGTCTCTGCTTAGCCGCGGTCATGAGCCGGCACAGCCGGCTGCAGAGGCAGGTTCTGAGCCTGTACC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 90 bp | AGCAGATCGCGGTACAGGCTCAGAACCTGCCTCTGCAGCCGGCTGTaGCGGCTCATGACCGCGGCTAAGCAGAGACGCTCAGCGAACGAC | + |
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Preference number: 5 (lower is better) Translates to: SRSRYRLRTCLCSRL*RLMTAAKQRRSAND Trigger: GTCGTTCGCTGAGCGTCTCTGCTTAGCCGCGGTCATGAGCCGGCACAGCCGGCTGCAGAGGCAGGTTCTGAGCCTGTACCGCGATCTGCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CAA 90 bp | CCAAGCCCTCATGGGGGAGGAGCACCGACCTGTCTCCAAGCATCGGAAAAGGCGTGTCGTGGGGGTTCCTaGGACTGTCGCCGTCGTCAG | + |
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Preference number: 5 (lower is better) Translates to: PSPHGGGAPTCLQASEKACRGGS*DCRRRQ Trigger: CTGACGACGGCGACAGTCCAAGGAACCCCCACGACA...CGCCTTTTCCGATGCTTGGAGACAGGTCGGTGCTCCTCCCCCATGAGGGCTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CAA 90 bp | CCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTCTAGGCAAGTAGCTCTTGGCTaGACACTGTCCAGCCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: PSIGKGGPPLPSITGLSRQVALG*TLSSPP Trigger: TGGCGGGCTGGACAGTGTCAAGCCAAGAGCTACTTG...CCTAGAGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CAA 90 bp | CCAAGCATCGGAAAAGGCGGGCCTCCCTTGCCGTCCATCACGGGGCTCTCTAGGGAGAGGGGAGACTCCTaGAGGAGCCAGAAGTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: PSIGKGGPPLPSITGLSRERGDS*RSQKWV Trigger: TACCCACTTCTGGCTCCTCAAGGAGTCTCCCCTCTC...CCTAGAGAGCCCCGTGATGGACGGCAAGGGAGGCCCGCCTTTTCCGATGCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CAA 90 bp | CGTCCCAGGCCGCCCCAAGCCCTCATGGGGGAGGAGCACCGACCTGTCTCCAAGCCTCATGGTCCTGGCTaGTCACAATTAATGGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: RPRPPQALMGEEHRPVSKPHGPG*SQLMGE Trigger: TTCCCCCATTAATTGTGACAAGCCAGGACCATGAGG...CTTGGAGACAGGTCGGTGCTCCTCCCCCATGAGGGCTTGGGGCGGCCTGGGACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CAA 90 bp | TCAGGCGAGCCTCCTGGCTCCACCACGCCATCGAGCGAGTTCGGCTCTTCGCCTCCAATTTTATTCCCTTaGTCCAACATTCCGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: SGEPPGSTTPSSEFGSSPPILFP*SNIPRG Trigger: CCCTCTCGGAATGTTGGACAAAGGGAATAAAATTGG...AGGCGAAGAGCCGAACTCGCTCGATGGCGTGGTGGAGCCAGGAGGCTCGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS-3UTR CAA 90 bp | CCAAGCCCTCATGGGGGAGGAGCACCGACCTGTCTCCAAGCATCGGAAAAGGCGTTTGGGGGTCTTCAGTaGATCAACCAGGGTGATAGA | + |
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Preference number: 5 (lower is better) Translates to: PSPHGGGAPTCLQASEKAFGGLQ*INQGDR Trigger: TCTATCACCCTGGTTGATCAACTGAAGACCCCCAAA...CGCCTTTTCCGATGCTTGGAGACAGGTCGGTGCTCCTCCCCCATGAGGGCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS CCA 72 bp | GCCCGCGGGCGTACGAAGGCGCCCATGGCGGTGGCGTaGCCCGAGCGTAGCAGCTGCAGCTGGCGCCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: ARGRTKAPMAVA*PERSSCSWRRP Trigger: CGGGCGGCGCCAGCTGCAGCTGCTACGCTCGGGCCACGCCACCGCCATGGGCGCCTTCGTACGCCCGCGGGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 72 bp | GTCGGACCGCGGCAGGCCCGCATGCTGCCGGAACTCTaGCCGCACTCGCGCCTCGGCGCCCGGCTTCCCACG | + |
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Preference number: 6 (lower is better) Translates to: VGPRQARMLPEL*PHSRLGARLPT Trigger: CGTGGGAAGCCGGGCGCCGAGGCGCGAGTGCGGGCAGAGTTCCGGCAGCATGCGGGCCTGCCGCGGTCCGAC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS CCA 72 bp | TCGGGGCCCGCGGGCGTACGAAGGCGCCCATGGCGGTaGCGTGGCCCGAGCGTAGCAGCTGCAGCTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SGPAGVRRRPWR*RGPSVAAAAGA Trigger: GGCGCCAGCTGCAGCTGCTACGCTCGGGCCACGCCACCGCCATGGGCGCCTTCGTACGCCCGCGGGCCCCGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS CCA 72 bp | CCCCGGTCGGGGCCCGCGGGCGTACGAAGGCGCCCATaGCGGTGGCGTGGCCCGAGCGTAGCAGCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PRSGPAGVRRRP*RWRGPSVAAAA Trigger: AGCTGCAGCTGCTACGCTCGGGCCACGCCACCGCCATGGGCGCCTTCGTACGCCCGCGGGCCCCGACCGGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 72 bp | ATGCGCAGCACGTCGGACCGCGGCAGGCCCGCATGCTaGCGGAACTCTGCCCGCACTCGCGCCTCGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: MRSTSDRGRPAC*RNSARTRASAP Trigger: GGGCGCCGAGGCGCGAGTGCGGGCAGAGTTCCGGCAGCATGCGGGCCTGCCGCGGTCCGACGTGCTGCGCAT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 72 bp | GCGCCCATGGCGGTGGCGTGGCCCGAGCGTAGCAGCTaGAGCTGGCGCCGCCCGCGGCGGTACAGGTACTCG | + |
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Preference number: 6 (lower is better) Translates to: APMAVAWPERSS*SWRRPRRYRYS Trigger: CGAGTACCTGTACCGCCGCGGGCGGCGCCAGCTGCAGCTGCTACGCTCGGGCCACGCCACCGCCATGGGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 72 bp | TCGATGCGCAGCACGTCGGACCGCGGCAGGCCCGCATaGTGCCGGAACTCTGCCCGCACTCGCGCCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SMRSTSDRGRPA*CRNSARTRASA Trigger: CGCCGAGGCGCGAGTGCGGGCAGAGTTCCGGCAGCATGCGGGCCTGCCGCGGTCCGACGTGCTGCGCATCGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 72 bp | GCAGCTGGCGCCGCCCGCGGCGGTACAGGTACTCGATaGGCAGCACGTCGGACCGCGGCAGGCCCGCATGCT | + |
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Preference number: 6 (lower is better) Translates to: AAGAARGGTGTR*AARRTAAGPHA Trigger: AGCATGCGGGCCTGCCGCGGTCCGACGTGCTGCGCATCGAGTACCTGTACCGCCGCGGGCGGCGCCAGCTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS CCA 72 bp | ATGGCGGTGGCGTGGCCCGAGCGTAGCAGCTGCAGCTaGCGCCGCCCGCGGCGGTACAGGTACTCGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: MAVAWPERSSCS*RRPRRYRYSMR Trigger: GCGCATCGAGTACCTGTACCGCCGCGGGCGGCGCCAGCTGCAGCTGCTACGCTCGGGCCACGCCACCGCCAT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS CCA 72 bp | GGTCTCCGGTGCCCCCGTGCTGTCGTGGGGGTTCCTTaGACTGTCGCCGTCGTCAGGCTGGCAACCCACGCC | + |
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Preference number: 6 (lower is better) Translates to: GLRCPRAVVGVP*TVAVVRLATHA Trigger: GGCGTGGGTTGCCAGCCTGACGACGGCGACAGTCCAAGGAACCCCCACGACAGCACGGGGGCACCGGAGACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS CAA 72 bp | GGGTCTCCGGTGCCCCCGTGCTGTCGTGGGGGTTCCTaGGACTGTCGCCGTCGTCAGGCTGGCAACCCACGC | + |
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Preference number: 6 (lower is better) Translates to: GSPVPPCCRGGS*DCRRRQAGNPR Trigger: GCGTGGGTTGCCAGCCTGACGACGGCGACAGTCCAAGGAACCCCCACGACAGCACGGGGGCACCGGAGACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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| CDS GCA 72 bp | CGGTACAGGCTCAGAACCTGCCTCTGCAGCCGGCTGTaGCGGCTCATGACCGCGGCTAAGCAGAGACGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RYRLRTCLCSRL*RLMTAAKQRRS Trigger: TGAGCGTCTCTGCTTAGCCGCGGTCATGAGCCGGCACAGCCGGCTGCAGAGGCAGGTTCTGAGCCTGTACCG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378887.4 |
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