Pregenerated sensors for SDHA (Homo sapiens)
Ensembl gene IDs: ENSG00000073578Ensembl transcript IDs: ENST00000264932.11, ENST00000503674.5, ENST00000509632.5, ENST00000511810.5, ENST00000514027.5, ENST00000514233.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCGGCTGCAGTGAGCTGTaGTTGTACTACTGCACCGAT | + |
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Preference number: 2 (lower is better) Translates to: PVAPTTQKAESGRSPELPGCSEL*LYYCTD Trigger: ATCGGTGCAGTAGTACAATCACAGCTCACTGCAGCC...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| 3UTR-3UTR TCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCAGTTTGAGGCTGCAGTaGGCTGTGATTGTACTACTG | + |
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Preference number: 2 (lower is better) Translates to: PVAPTTQKAESGRSPELPSLRLQ*AVIVLL Trigger: CAGTAGTACAATCACAGCTCACTGCAGCCTCAAACT...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR CCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCCTGTTGGCCACGCCTTaGCCAGCGCCAGGCGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPLLATP*PAPGAE Trigger: CTCGGCGCCTGGCGCTGGCCAAGGCGTGGCCAACAG...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCGGAGGGAGGATCACTTaGGACCAGCCTAGGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPGGRIT*DQPRQH Trigger: GTGTTGCCTAGGCTGGTCTCAAGTGATCCTCCCTCC...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR CCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCTGTTTGCAACACTGTTaGCCACGCCTTGGCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPCLQHC*PRLGQR Trigger: GCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACA...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCTCCCCAGAGCAGCATTaGTTCCTCCCTGTGCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPSPEQH*FLPVLQ Trigger: TTGCAGCACAGGGAGGAATCAATGCTGCTCTGGGGA...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCGTCAGGAAGATCACCTaGGCTGCCCAGGAGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPVRKIT*AAQEFE Trigger: CTCAAACTCCTGGGCAGCTCAGGTGATCTTCCTGAC...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCCCTGTAGGGTGGAACTaGACAAACTCTAGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPPVGWN*TNSRSW Trigger: CCAGGACCTAGAGTTTGTTCAGTTCCACCCTACAGG...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR CCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCGCCCGTAGCCTCCTGTaGCAACAACAGTGTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPARSLL*QQQCSL Trigger: CAAAGAACACTGTTGTTGCCACAGGAGGCTACGGGC...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR CCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCGCCCCTTGTAGTTGGTaGGAATGCCGCCCATGTTAT | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPAPCSW*ECRPCY Trigger: ATAACATGGGCGGCATTCCCACCAACTACAAGGGGC...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCAGCATGATTTTGCATTaGCTTCTGCATGCTGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPSMILH*LLHAES Trigger: CGACTCAGCATGCAGAAGTCAATGCAAAATCATGCT...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR GCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCTTTTGCATTGACTTCTaGATGCTGAGTCGCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPFCIDF*MLSRSS Trigger: GGAACTGCGACTCAGCATGCAGAAGTCAATGCAAAA...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCTCCACTACTGGATACTaGGCAGAAATGGAATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PVAPTTQKAESGRSPELPSTTGY*AEMESE Trigger: TTCAGATTCCATTTCTGCTCAGTATCCAGTAGTGGA...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR CAA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCACTGTTGGCCACGCCTaGGCCAGCGCCAGGCGCCGA | + |
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Preference number: 5 (lower is better) Translates to: PVAPTTQKAESGRSPELPTVGHA*ASARRR Trigger: TCGGCGCCTGGCGCTGGCCAAGGCGTGGCCAACAGT...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS-3UTR CAA 90 bp | CCTGTAGCCCCAACTACTCAGAAGGCTGAGTCAGGAAGATCACCTGAGCTGCCCCTGTTTGCAACACTGTaGGCCACGCCTTGGCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: PVAPTTQKAESGRSPELPLFATL*ATPWPA Trigger: CGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACAG...GGGCAGCTCAGGTGATCTTCCTGACTCAGCCTTCTGAGTAGTTGGGGCTACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264932.11 |
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| CDS CCA 90 bp | CTGGTATCATATCGCAGAGACTGCCACATTAGCAACAGCCCCATGTaGCTGGCAGCTACCAAAGCGGACGGTTGCAGACGAGCAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: LVSYRRDCHISNSPM*LAATKADGCRRADS Trigger: GGAATCTGCTCGTCTGCAACCGTCCGCTTTGGTAGCTGCCAGCCACATGGGGCTGTTGCTAATGTGGCAGTCTCTGCGATATGATACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514233.1 |
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| CDS CCA 90 bp | ATTAGAAAGGCCTCTATGCCAAATACAGTCGTCCCTGCGTATCCGTaGCAGGTTGGGTCCAGGACCCCCACGGATACCAAAATCCGTGGA | + |
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Preference number: 5 (lower is better) Translates to: IRKASMPNTVVPAYP*QVGSRTPTDTKIRG Trigger: TCCACGGATTTTGGTATCCGTGGGGGTCCTGGACCCAACCTGCCACGGATACGCAGGGACGACTGTATTTGGCATAGAGGCCTTTCTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511810.5 |
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| CDS GCA 90 bp | AGTATTCCTTACGGGAAACAAAAGGATGGGCTCTGGCTAGTTATCTaGAGCAGGAAAATGTCCTTAAGGCACAGATCGCTCATGCTATTG | + |
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Preference number: 5 (lower is better) Translates to: SIPYGKQKDGLWLVI*SRKMSLRHRSLMLL Trigger: CAATAGCATGAGCGATCTGTGCCTTAAGGACATTTTCCTGCTGCAGATAACTAGCCAGAGCCCATCCTTTTGTTTCCCGTAAGGAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503674.5 |
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| CDS CCA 90 bp | AGTCTGCATATTTGTAAGGATGCAATTTTATTTTCAATACATAGTTaGCTGAAACCACACATGTGGAACCAATGGGTACGGAGGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: SLHICKDAILFSIHS*LKPHMWNQWVRRAT Trigger: GGTGGCCCTCCGTACCCATTGGTTCCACATGTGTGGTTTCAGCCAACTATGTATTGAAAATAAAATTGCATCCTTACAAATATGCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511810.5 |
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| CDS TCA 90 bp | TATTTGTTTTGCAAAGTGATAAAAGCAAAGGCAGCTTTGTTACGGTaGGCTACTTCTTGCAGAGTCAGGATCCACATCTGCAGACTATAC | + |
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Preference number: 5 (lower is better) Translates to: YLFCKVIKAKAALLR*ATSCRVRIHICRLY Trigger: GTATAGTCTGCAGATGTGGATCCTGACTCTGCAAGAAGTAGCTCACCGTAACAAAGCTGCCTTTGCTTTTATCACTTTGCAAAACAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503674.5 |
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| CDS CAA 72 bp | CAGCCCCATGTGGCTGGCAGCTACCAAAGCGGACGGTaGCAGACGAGCAGATTCCGGCACCGCAGAAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: QPHVAGSYQSGR*QTSRFRHRRKV Trigger: TACCTTTCTGCGGTGCCGGAATCTGCTCGTCTGCAACCGTCCGCTTTGGTAGCTGCCAGCCACATGGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514027.5 ENST00000514233.1 |
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| CDS CCA 72 bp | GCTACACCTGCCACATTAGCAACAGCCCCATGTGGCTaGCAGCTACCAAAGCGGACGGTTGCAGACGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ATPATLATAPCG*QLPKRTVADEQ Trigger: CTGCTCGTCTGCAACCGTCCGCTTTGGTAGCTGCCAGCCACATGGGGCTGTTGCTAATGTGGCAGGTGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514027.5 |
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| CDS CAA 72 bp | TGCCAAATACAGTCGTCCCTGCGTATCCGTGGCAGGTaGGGTCCAGGACCCCCACGGATACCAAAATCCGTG | + |
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Preference number: 6 (lower is better) Translates to: CQIQSSLRIRGR*GPGPPRIPKSV Trigger: CACGGATTTTGGTATCCGTGGGGGTCCTGGACCCAACCTGCCACGGATACGCAGGGACGACTGTATTTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511810.5 |
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| CDS GCA 72 bp | AAACGGTTTTCCACCCTGGGTGGGCCAGGTGTCCCTTaGCCTCATTCCAGTAAACCGACAACCTTCCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: KRFSTLGGPGVP*PHSSKPTTFQR Trigger: ACGCTGGAAGGTTGTCGGTTTACTGGAATGAGGGCAAGGGACACCTGGCCCACCCAGGGTGGAAAACCGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503674.5 |
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| CDS CCA 72 bp | TTCAGCTACACCTGCCACATTAGCAACAGCCCCATGTaGCTGGCAGCTACCAAAGCGGACGGTTGCAGACGA | + |
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Preference number: 6 (lower is better) Translates to: FSYTCHISNSPM*LAATKADGCRR Trigger: TCGTCTGCAACCGTCCGCTTTGGTAGCTGCCAGCCACATGGGGCTGTTGCTAATGTGGCAGGTGTAGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514027.5 |
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| CDS GCA 72 bp | CAGGTGTCCTTGGTAAGTGCATTAGAAAGGCCTCTATaGCAAATACAGTCGTCCCTGCGTATCCGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QVSLVSALERPL*QIQSSLRIRGR Trigger: CCTGCCACGGATACGCAGGGACGACTGTATTTGGCATAGAGGCCTTTCTAATGCACTTACCAAGGACACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511810.5 |
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| CDS CAA 72 bp | TTTCTTTTTCCTCTGATTAAACTGCTTTCGAACAGTTaGCAAGCTGTGTCAGTGCACGCCTTGGCCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: FLFPLIKLLSNS*QAVSVHALASA Trigger: GGCGCTGGCCAAGGCGTGCACTGACACAGCTTGCAAACTGTTCGAAAGCAGTTTAATCAGAGGAAAAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509632.5 |
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| CDS CAA 72 bp | TGGCCATCAAGAGCATGTCAGAGTGCTGCAGAGATTTaGTTTATGGCCAGTTTTGGGGACAGTTTATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WPSRACQSAAEI*FMASFGDSLWP Trigger: TGGCCATAAACTGTCCCCAAAACTGGCCATAAACAAAATCTCTGCAGCACTCTGACATGCTCTTGATGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503674.5 |
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