Pregenerated sensors for SDF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000132581Ensembl transcript IDs: ENST00000247020.9, ENST00000585428.1, ENST00000585749.5, ENST00000587338.1, ENST00000587788.1, ENST00000588472.6, ENST00000589788.1, ENST00000591903.1, ENST00000592250.5
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACATTGTGCGTTAACAGTGGCTCAGAGCCTCTAGATTCACAGCTCTaGATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTCATGAA | + |
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Preference number: 1 (lower is better) Translates to: TLCVNSGSEPLDSQL*MVGFCLQQLTGLHE Trigger: TTCATGAAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGAGGCTCTGAGCCACTGTTAACGCACAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| 3UTR-3UTR TCA 90 bp | TCTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTCTACTCAGAAAGAACTaGCCCACGCAAGTCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SRFTALHGGLLPSTTHWALLRKN*PTQVWE Trigger: CTCCCAGACTTGCGTGGGTCAGTTCTTTCTGAGTAG...AGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587788.1 |
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| 3UTR-3UTR CCA 90 bp | AGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTCAGTAGTTGTTCTGACTTaGCTGGGCCATGCCATGCAC | + |
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Preference number: 2 (lower is better) Translates to: RFTALHGGLLPSTTHWASVVVLT*LGHAMH Trigger: GTGCATGGCATGGCCCAGCCAAGTCAGAACAACTAC...TGAAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| 3UTR-3UTR GCA 90 bp | AGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTCACCATGCACCTCTTTTTaGCCACTGATAGGTCGACCA | + |
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Preference number: 2 (lower is better) Translates to: RFTALHGGLLPSTTHWASPCTSF*PLIGRP Trigger: TGGTCGACCTATCAGTGGGCAAAAAGAGGTGCATGG...TGAAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| 3UTR-3UTR TCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCAACAGATGTCTGTaGACATTGTGCGTTAACAGT | + |
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Preference number: 2 (lower is better) Translates to: QGEAATDVCEHCALTVAQSNRCL*TLCVNS Trigger: ACTGTTAACGCACAATGTTCACAGACATCTGTTGCT...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000587788.1 |
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| 3UTR GCA 72 bp | GTTAACAGTGGCTCAGAGCCTCTAGATTCACAGCTCTaGATGGTGGGCTTCTGCCTTCAACAACTCACTGGG | + |
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Preference number: 3 (lower is better) Translates to: VNSGSEPLDSQL*MVGFCLQQLTG Trigger: CCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGAGGCTCTGAGCCACTGTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587788.1 ENST00000591903.1 |
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| 3UTR-3UTR CAA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCTCTTCTGTAAATCCTTaGAGCCTTTGTTTTCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: EAATDVCEHCALTVAQSLSSVNP*SLCFLL Trigger: GAGGAGAAAACAAAGGCTCAAAGGATTTACAGAAGA...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR GCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCCGCACGTCGTGTGAGTaGAGTCGGACGTTGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLRTSCE*SRTLWR Trigger: GCGCCACAACGTCCGACTGCACTCACACGACGTGCG...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGCTGCTGCCCACTACCTaGCCCATAGCGCACGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQLLPTT*PIAHVV Trigger: CACGACGTGCGCTATGGGTCAGGTAGTGGGCAGCAG...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR TCA 90 bp | CTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTCGTTGTGGCGCGTATTaGGTAGCTTCACCACGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LDSQLCMVGFCLQQLTGLRCGAY*VASPRS Trigger: GCTCCGTGGTGAAGCTACTCAATACGCGCCACAACG...AAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCATAGCGCACGTCGTGTaGGTGCAGTCGGACGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLIAHVV*VQSDVV Trigger: CACAACGTCCGACTGCACTCACACGACGTGCGCTAT...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | TCTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTATAGCGCACGTCGTGTaGGTGCAGTCGGACGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: SRFTALHGGLLPSTTHWAIAHVV*VQSDVV Trigger: CACAACGTCCGACTGCACTCACACGACGTGCGCTAT...AGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR GCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCGGCTGGGCCATGCCATaGACCTCTTTTTGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLGWAMP*TSFCPL Trigger: CAGTGGGCAAAAAGAGGTGCATGGCATGGCCCAGCC...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | TCTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTCCCTCTCACACACTGTaGCACTCTTCCCCCGTATCC | + |
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Preference number: 4 (lower is better) Translates to: SRFTALHGGLLPSTTHWAPSHTL*HSSPVS Trigger: GGATACGGGGGAAGAGTGCCACAGTGTGTGAGAGGG...AGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGCGTTGTGGCGCGTATTaGGTAGCTTCACCACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQRCGAY*VASPRS Trigger: GCTCCGTGGTGAAGCTACTCAATACGCGCCACAACG...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR GCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGGGCTGGGCCATGCCATaGACCTCTTTTTGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQGWAMP*TSFCPL Trigger: CAGTGGGCAAAAAGAGGTGCATGGCATGGCCCAGCC...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000587788.1 |
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| CDS-3UTR CCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGCCCTCTCACACACTGTaGCACTCTTCCCCCGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQPSHTL*HSSPVS Trigger: GGATACGGGGGAAGAGTGCCACAGTGTGTGAGAGGG...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR GCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCTGCATGGTGGGCTTCTaGCTTCAACAACTCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLCMVGF*LQQLTG Trigger: CCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCA...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR GCA 90 bp | AGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTCATGCATGGTGGGCTTCTaGCTTCAACAACTCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: RFTALHGGLLPSTTHWASCMVGF*LQQLTG Trigger: CCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCA...TGAAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCTGCAGTCGGACGTTGTaGCGCGTATTGAGTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLCSRTL*RVLSSF Trigger: GAAGCTACTCAATACGCGCCACAACGTCCGACTGCA...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCGTAGTTGTTCTGACTTaGCTGGGCCATGCCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLVVVLT*LGHAMH Trigger: GTGCATGGCATGGCCCAGCCAAGTCAGAACAACTAC...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | TCTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTGTAGTTGTTCTGACTTaGCTGGGCCATGCCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: SRFTALHGGLLPSTTHWAVVVLT*LGHAMH Trigger: GTGCATGGCATGGCCCAGCCAAGTCAGAACAACTAC...AGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCCACAGCTCTGCATGGTaGGCTTCTGCCTTCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLHSSAW*ASAFNN Trigger: GTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTG...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | AGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTCACACAGCTCTGCATGGTaGGCTTCTGCCTTCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: RFTALHGGLLPSTTHWASHSSAW*ASAFNN Trigger: GTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTG...TGAAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGGGTGAAGTGAAGTGGTaGCTATGGAGGTTTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQGEVKW*LWRFRP Trigger: TGGCCGAAACCTCCATAGTCACCACTTCACTTCACC...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR TCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGCTACTCAGAAAGAACTaGCCCACGCAAGTCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQLLRKN*PTQVWE Trigger: CTCCCAGACTTGCGTGGGTCAGTTCTTTCTGAGTAG...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000587788.1 |
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| CDS-3UTR GCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCCCATGCACCTCTTTTTaGCCACTGATAGGTCGACCA | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLPCTSF*PLIGRP Trigger: TGGTCGACCTATCAGTGGGCAAAAAGAGGTGCATGG...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR GCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCCTAGATTCACAGCTCTaGATGGTGGGCTTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLLDSQL*MVGFCL Trigger: AAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAG...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR GCA 90 bp | TCTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTCTAGATTCACAGCTCTaGATGGTGGGCTTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SRFTALHGGLLPSTTHWALDSQL*MVGFCL Trigger: AAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAG...AGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGTGCAGTCGGACGTTGTaGCGCGTATTGAGTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQCSRTL*RVLSSF Trigger: GAAGCTACTCAATACGCGCCACAACGTCCGACTGCA...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR CCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGCACAGCTCTGCATGGTaGGCTTCTGCCTTCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQHSSAW*ASAFNN Trigger: GTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTG...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000587788.1 |
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| CDS-3UTR CCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCATTCACAGCTCTGCATaGTGGGCTTCTGCCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLIHSSA*WASAFN Trigger: GTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAAT...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | AGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTCAATTCACAGCTCTGCATaGTGGGCTTCTGCCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: RFTALHGGLLPSTTHWASIHSSA*WASAFN Trigger: GTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAAT...TGAAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| 3UTR CAA 72 bp | GTTCTGACTTGGCTGGGCCATGCCATGCACCTCTTTTaGCCCACTGATAGGTCGACCATATTGTTCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VLTWLGHAMHLF*PTDRSTILFSC Trigger: ACAGGAGAACAATATGGTCGACCTATCAGTGGGCAAAAAGAGGTGCATGGCATGGCCCAGCCAAGTCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCCAGAAAGAGGTGAAGTaGAGTGGTGACTATGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLQKEVK*SGDYGG Trigger: ACCTCCATAGTCACCACTTCACTTCACCTCTTTCTG...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | TCTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTCAGAAAGAGGTGAAGTaGAGTGGTGACTATGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SRFTALHGGLLPSTTHWAQKEVK*SGDYGG Trigger: ACCTCCATAGTCACCACTTCACTTCACCTCTTTCTG...AGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | AGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTCACAGAAAGAGGTGAAGTaGAGTGGTGACTATGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: RFTALHGGLLPSTTHWASQKEVK*SGDYGG Trigger: ACCTCCATAGTCACCACTTCACTTCACCTCTTTCTG...TGAAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCCATATTGTTCTCCTGTaGCAGACAGCAGTACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLHIVLL*QTAVPQ Trigger: CTGAGGTACTGCTGTCTGTCACAGGAGAACAATATG...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGATTCACAGCTCTGCATaGTGGGCTTCTGCCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQIHSSA*WASAFN Trigger: GTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAAT...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000587788.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCTACATTAACAGTCCATaGTGCCAAGCTCCTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLYINSP*CQAPEE Trigger: CTCTTCAGGAGCTTGGCATCATGGACTGTTAATGTA...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR GCA 90 bp | TCACCAAAAGCACTCACTTCCTTGAATCTCAACTTGATCCCTTCTTCTGTAAATCGCACGTCGTGTGAGTaGAGTCGGACGTTGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SPKALTSLNLNLIPSSVNRTSCE*SRTLWR Trigger: GCGCCACAACGTCCGACTGCACTCACACGACGTGCG...ATTTACAGAAGAAGGGATCAAGTTGAGATTCAAGGAAGTGAGTGCTTTTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCAGCAACAGATGTCTGTaGACATTGTGCGTTAACAGT | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLSNRCL*TLCVNS Trigger: ACTGTTAACGCACAATGTTCACAGACATCTGTTGCT...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGATGATGCCAAGCTCCTaGAGAGTAAAAGTTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QGEAATDVCEHCALTVAQMMPSS*RVKVSQ Trigger: CTGGGAAACTTTTACTCTTCAGGAGCTTGGCATCAT...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR CCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCAAAGCACTCACTTCCTaGTTTCCAGAAAGAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLKALTS*FPERGE Trigger: TTCACCTCTTTCTGGAAACCAGGAAGTGAGTGCTTT...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR CCA 90 bp | TCTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTACCTTACAGAGCAACTaGTTTCCAGAAAGAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SRFTALHGGLLPSTTHWATLQSN*FPERGE Trigger: TTCACCTCTTTCTGGAAACCAGTTGCTCTGTAAGGT...AGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR CCA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCACCATATTGTTCTCCTaGTTTCCAGAAAGAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: EAATDVCEHCALTVAQSLTILFS*FPERGE Trigger: TTCACCTCTTTCTGGAAACCAGGAGAACAATATGGT...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587788.1 |
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| CDS-3UTR TCA 90 bp | CACTTCCTTGAATCTCAACTTGATCCCTTCTTCTGTAAATCCTTTGAGCCTTTGGGTGAAGTGAAGTGGTaGCTATGGAGGTTTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HFLESQLDPFFCKSFEPLGEVKW*LWRFRP Trigger: TGGCCGAAACCTCCATAGTCACCACTTCACTTCACC...CAAAGGCTCAAAGGATTTACAGAAGAAGGGATCAAGTTGAGATTCAAGGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | CACTTCCTTGAATCTCAACTTGATCCCTTCTTCTGTAAATCCTTTGAGCCTTTGCATATTGTTCTCCTGTaGCAGACAGCAGTACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HFLESQLDPFFCKSFEPLHIVLL*QTAVPQ Trigger: CTGAGGTACTGCTGTCTGTCACAGGAGAACAATATG...CAAAGGCTCAAAGGATTTACAGAAGAAGGGATCAAGTTGAGATTCAAGGAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR GCA 90 bp | TCACCAAAAGCACTCACTTCCTTGAATCTCAACTTGATCCCTTCTTCTGTAAATCTAGATTCACAGCTCTaGATGGTGGGCTTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SPKALTSLNLNLIPSSVNLDSQL*MVGFCL Trigger: AAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAG...ATTTACAGAAGAAGGGATCAAGTTGAGATTCAAGGAAGTGAGTGCTTTTGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR TCA 90 bp | TCACCAAAAGCACTCACTTCCTTGAATCTCAACTTGATCCCTTCTTCTGTAAATAGCAACAGATGTCTGTaGACATTGTGCGTTAACAGT | + |
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Preference number: 4 (lower is better) Translates to: SPKALTSLNLNLIPSSVNSNRCL*TLCVNS Trigger: ACTGTTAACGCACAATGTTCACAGACATCTGTTGCT...ATTTACAGAAGAAGGGATCAAGTTGAGATTCAAGGAAGTGAGTGCTTTTGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS GCA 90 bp | GCCCACTACGATACTCTCGCTCTGTTCCAGGGGCTCAGTGACAGCTaGCTTCCTGAGCCGCTTCGGTTACCTTTCGCACCCACGAGACGA | + |
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Preference number: 5 (lower is better) Translates to: AHYDTLALFQGLSDS*LPEPLRLPFAPTRR Trigger: TCGTCTCGTGGGTGCGAAAGGTAACCGAAGCGGCTCAGGAAGGCAGCTGTCACTGAGCCCCTGGAACAGAGCGAGAGTATCGTAGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587338.1 ENST00000588472.6 ENST00000592250.5 |
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| CDS GCA 90 bp | ACTCACTTCGATACTCTCGCTCTGTTCCAGGGGCTCAGTGACAGCTaGCTTCCTGAGCCGCTTCGGTTACCTTTCGCACCCACGAGACGA | + |
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Preference number: 5 (lower is better) Translates to: THFDTLALFQGLSDS*LPEPLRLPFAPTRR Trigger: TCGTCTCGTGGGTGCGAAAGGTAACCGAAGCGGCTCAGGAAGGCAGCTGTCACTGAGCCCCTGGAACAGAGCGAGAGTATCGAAGTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585749.5 |
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| CDS-3UTR CAA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGGAGTGCAGTCGGACGTaGTGGCGCGTATTGAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: QGEAATDVCEHCALTVAQECSRT*WRVLSS Trigger: GCTACTCAATACGCGCCACAACGTCCGACTGCACTC...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR CAA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGACGTTGTGGCGCGTATaGAGTAGCTTCACCACGGAG | + |
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Preference number: 5 (lower is better) Translates to: QGEAATDVCEHCALTVAQTLWRV*SSFTTE Trigger: CTCCGTGGTGAAGCTACTCAATACGCGCCACAACGT...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR CAA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGGCCATGCACCTCTTTTaGCCCACTGATAGGTCGACC | + |
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Preference number: 5 (lower is better) Translates to: QGEAATDVCEHCALTVAQAMHLF*PTDRST Trigger: GGTCGACCTATCAGTGGGCAAAAAGAGGTGCATGGC...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000587788.1 |
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| CDS-3UTR CAA 90 bp | TCTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTAGTAGTTGTTCTGACTaGGCTGGGCCATGCCATGCA | + |
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Preference number: 5 (lower is better) Translates to: SRFTALHGGLLPSTTHWASSCSD*AGPCHA Trigger: TGCATGGCATGGCCCAGCCAAGTCAGAACAACTACT...AGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR CAA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCAGTAGTTGTTCTGACTaGGCTGGGCCATGCCATGCA | + |
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Preference number: 5 (lower is better) Translates to: EAATDVCEHCALTVAQSLSSCSD*AGPCHA Trigger: TGCATGGCATGGCCCAGCCAAGTCAGAACAACTACT...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000587788.1 ENST00000591903.1 |
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| CDS-3UTR CAA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGTAGTTGTTCTGACTaGGCTGGGCCATGCCATGCA | + |
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Preference number: 5 (lower is better) Translates to: QGEAATDVCEHCALTVAQSSCSD*AGPCHA Trigger: TGCATGGCATGGCCCAGCCAAGTCAGAACAACTACT...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247020.9 ENST00000587788.1 |
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| CDS-3UTR CAA 90 bp | CAAGGTGAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGTTAAAAGGGCCCACATaGGAGCTTCATAGCGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QGEAATDVCEHCALTVAQLKGPT*ELHSVS Trigger: GGAGACGCTATGAAGCTCCAATGTGGGCCCTTTTAA...CTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTCACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000247020.9 |
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| CDS-3UTR CAA 90 bp | GAGGCAGCAACAGATGTCTGTGAACATTGTGCGTTAACAGTGGCTCAGAGCCTCGATAGGTCGACCATATaGTTCTCCTGGTTTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: EAATDVCEHCALTVAQSLDRSTI*FSWFPE Trigger: TTCTGGAAACCAGGAGAACAATATGGTCGACCTATC...GAGGCTCTGAGCCACTGTTAACGCACAATGTTCACAGACATCTGTTGCTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587788.1 |
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| CDS-3UTR CAA 90 bp | CACTTCCTTGAATCTCAACTTGATCCCTTCTTCTGTAAATCCTTTGAGCCTTTGGAGTGCAGTCGGACGTaGTGGCGCGTATTGAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: HFLESQLDPFFCKSFEPLECSRT*WRVLSS Trigger: GCTACTCAATACGCGCCACAACGTCCGACTGCACTC...CAAAGGCTCAAAGGATTTACAGAAGAAGGGATCAAGTTGAGATTCAAGGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR CAA 90 bp | CTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTTCTTCTGTAAATCCTTaGAGCCTTTGTTTTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LDSQLCMVGFCLQQLTGLSSVNP*SLCFLL Trigger: GAGGAGAAAACAAAGGCTCAAAGGATTTACAGAAGA...AAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR CAA 90 bp | TCACCAAAAGCACTCACTTCCTTGAATCTCAACTTGATCCCTTCTTCTGTAAATACGTTGTGGCGCGTATaGAGTAGCTTCACCACGGAG | + |
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Preference number: 5 (lower is better) Translates to: SPKALTSLNLNLIPSSVNTLWRV*SSFTTE Trigger: CTCCGTGGTGAAGCTACTCAATACGCGCCACAACGT...ATTTACAGAAGAAGGGATCAAGTTGAGATTCAAGGAAGTGAGTGCTTTTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS-3UTR CAA 90 bp | CTAGATTCACAGCTCTGCATGGTGGGCTTCTGCCTTCAACAACTCACTGGGCTTTCCTTGAATCTCAACTaGATCCCTTCTTCTGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: LDSQLCMVGFCLQQLTGLSLNLN*IPSSVN Trigger: ATTTACAGAAGAAGGGATCAAGTTGAGATTCAAGGA...AAGCCCAGTGAGTTGTTGAAGGCAGAAGCCCACCATGCAGAGCTGTGAATCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS TCA 90 bp | TTATTAAGACATCGCAGTGATGATAACTCATGTCCTTGCCTAGTCTaGCTGATCAGATGGGTTTTGGGAATCATGAACCAGACTAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LLRHRSDDNSCPCLV*LIRWVLGIMNQTSP Trigger: TGGGCTAGTCTGGTTCATGATTCCCAAAACCCATCTGATCAGTCAGACTAGGCAAGGACATGAGTTATCATCACTGCGATGTCTTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585428.1 |
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| CDS-3UTR CAA 90 bp | TCACCAAAAGCACTCACTTCCTTGAATCTCAACTTGATCCCTTCTTCTGTAAATAAAGCACTCACTTCCTaGAATCTCAACTTGATCCCT | + |
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Preference number: 5 (lower is better) Translates to: SPKALTSLNLNLIPSSVNKALTS*NLNLIP Trigger: AGGGATCAAGTTGAGATTCAAGGAAGTGAGTGCTTT...ATTTACAGAAGAAGGGATCAAGTTGAGATTCAAGGAAGTGAGTGCTTTTGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591903.1 |
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| CDS GCA 72 bp | GATACTCTCGCTCTGTTCCAGGGGCTCAGTGACAGCTaGCTTCCTGAGCCGCTTCGGTTACCTTTCGCACCC | + |
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Preference number: 6 (lower is better) Translates to: DTLALFQGLSDS*LPEPLRLPFAP Trigger: GGGTGCGAAAGGTAACCGAAGCGGCTCAGGAAGGCAGCTGTCACTGAGCCCCTGGAACAGAGCGAGAGTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000585749.5 ENST00000587338.1 ENST00000588472.6 ENST00000592250.5 |
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| CDS CAA 72 bp | ACGTCGTGTGAGTGCAGTCGGACGTTGTGGCGCGTATaGAGTAGCTTCACCACGGAGCCGCAAGTAACGACA | + |
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Preference number: 6 (lower is better) Translates to: TSCECSRTLWRV*SSFTTEPQVTT Trigger: TGTCGTTACTTGCGGCTCCGTGGTGAAGCTACTCAATACGCGCCACAACGTCCGACTGCACTCACACGACGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000247020.9 ENST00000585428.1 ENST00000591903.1 |
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| CDS GCA 72 bp | GCTCAGCCTCACCCTTCTTGCCTATGGCCAATATTGTaGCGTGTCATTAAACAGGTAAGAAGGGGTGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: AQPHPSCLWPIL*RVIKQVRRGGE Trigger: CTCCCCACCCCTTCTTACCTGTTTAATGACACGGCACAATATTGGCCATAGGCAAGAAGGGTGAGGCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589788.1 |
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| CDS CAA 72 bp | GTTCTGACTTGGCTGGGCCATGCCATGCACCTCTTTTaGCCCACTGATAGGTCGACCATATTGTTCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VLTWLGHAMHLF*PTDRSTILFSW Trigger: CCAGGAGAACAATATGGTCGACCTATCAGTGGGCAAAAAGAGGTGCATGGCATGGCCCAGCCAAGTCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587788.1 ENST00000588472.6 |
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| CDS CAA 90 bp | CCAGTAGTTGTTCTGACTTGGCTGGGCCATGCCATGCACCTCTTTTaGCCCACTGATAGGTCGACCATATTGTTCTCCTGGTTTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: PVVVLTWLGHAMHLF*PTDRSTILFSWFPE Trigger: TTCTGGAAACCAGGAGAACAATATGGTCGACCTATCAGTGGGCAAAAAGAGGTGCATGGCATGGCCCAGCCAAGTCAGAACAACTACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587788.1 ENST00000588472.6 |
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| CDS GCA 72 bp | CCACCTGAAGAGCTTTTTAAACCTACAGATTGCTACTaGCAAGCCTCTGTCCACCTCCACTCTAATTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PPEELFKPTDCY*QASVHLHSNSV Trigger: TACTGAATTAGAGTGGAGGTGGACAGAGGCTTGGCAGTAGCAATCTGTAGGTTTAAAAAGCTCTTCAGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585428.1 |
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| CDS GCA 72 bp | TCAGAACCACCTGAAGAGCTTTTTAAACCTACAGATTaGTACTGCCAAGCCTCTGTCCACCTCCACTCTAAT | + |
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Preference number: 6 (lower is better) Translates to: SEPPEELFKPTD*YCQASVHLHSN Trigger: ATTAGAGTGGAGGTGGACAGAGGCTTGGCAGTAGCAATCTGTAGGTTTAAAAAGCTCTTCAGGTGGTTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585428.1 |
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