Pregenerated sensors for SDCBP (Homo sapiens)
Ensembl gene IDs: ENSG00000137575Ensembl transcript IDs: ENST00000522243.5, ENST00000523483.5
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGGTTCATGCCGCCCGCTGTCCGCTGCCCGCTGCCCAGCGGTTATaGTCCCAGTCTTCTCCGCTCTTCGGCTGTTCGTGCCCGCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: AVHAARCPLPAAQRL*SQSSPLFGCSCPRA Trigger: GGCCCGCGGGCACGAACAGCCGAAGAGCGGAGAAGACTGGGAGCATAACCGCTGGGCAGCGGGCAGCGGACAGCGGGCGGCATGAACCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS CCA 90 bp | GGCCTGGGTGTGGGTCGTTCCTGCAGCTCCAGGTATCCGGCAAAGTaGGGCGGTTCATGCCGCCCGCTGTCCGCTGCCCGCTGCCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: GLGVGRSCSSRYPAK*GGSCRPLSAARCPA Trigger: CGCTGGGCAGCGGGCAGCGGACAGCGGGCGGCATGAACCGCCCCACTTTGCCGGATACCTGGAGCTGCAGGAACGACCCACACCCAGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS GCA 90 bp | CCGGCAAAGTGGGGCGGTTCATGCCGCCCGCTGTCCGCTGCCCGCTaGCCAGCGGTTATGCTCCCAGTCTTCTCCGCTCTTCGGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: PAKWGGSCRPLSAAR*PAVMLPVFSALRLF Trigger: GAACAGCCGAAGAGCGGAGAAGACTGGGAGCATAACCGCTGGGCAGCGGGCAGCGGACAGCGGGCGGCATGAACCGCCCCACTTTGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS GCA 90 bp | GGTCGTTCCTGCAGCTCCAGGTATCCGGCAAAGTGGGGCGGTTCATaGCGCCCGCTGTCCGCTGCCCGCTGCCCAGCGGTTATGCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GRSCSSRYPAKWGGS*RPLSAARCPAVMLP Trigger: TGGGAGCATAACCGCTGGGCAGCGGGCAGCGGACAGCGGGCGGCATGAACCGCCCCACTTTGCCGGATACCTGGAGCTGCAGGAACGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS GCA 90 bp | CAGGTATCCGGCAAAGTGGGGCGGTTCATGCCGCCCGCTGTCCGCTaGCCGCTGCCCAGCGGTTATGCTCCCAGTCTTCTCCGCTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: QVSGKVGRFMPPAVR*PLPSGYAPSLLRSS Trigger: CGAAGAGCGGAGAAGACTGGGAGCATAACCGCTGGGCAGCGGGCAGCGGACAGCGGGCGGCATGAACCGCCCCACTTTGCCGGATACCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS GCA 90 bp | GCCCAGCGGTTATGCTCCCAGTCTTCTCCGCTCTTCGGCTGTTCGTaGCCGCGGGCCCCGTGCCACCCACTCACTACTGTGTGCATCGCA | + |
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Preference number: 5 (lower is better) Translates to: AQRLCSQSSPLFGCS*PRAPCHPLTTVCIA Trigger: TGCGATGCACACAGTAGTGAGTGGGTGGCACGGGGCCCGCGGGCACGAACAGCCGAAGAGCGGAGAAGACTGGGAGCATAACCGCTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS CCA 90 bp | GATTACAGTGTGTTTCCATGTAGATGTCTTCGGATTGTTCTACTCTaGAGTCCATTTGGCTTCTTGAATCTGGATGTCCACTGCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: DYSVFPCRCLRIVLL*SPFGFLNLDVHCLP Trigger: AGGAAGGCAGTGGACATCCAGATTCAAGAAGCCAAATGGACTCCAGAGTAGAACAATCCGAAGACATCTACATGGAAACACACTGTAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS GCA 90 bp | GTTCTACTCTGGAGTCCATTTGGCTTCTTGAATCTGGATGTCCACTaGCTTCCTTCAGTTTGGGAAGTTTTGGCCAGTATTTCTTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: VLLWSPFGFLNLDVH*LPSVWEVLASISSN Trigger: ATTTGAAGAAATACTGGCCAAAACTTCCCAAACTGAAGGAAGGCAGTGGACATCCAGATTCAAGAAGCCAAATGGACTCCAGAGTAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CCA 90 bp | CCATTTGGCTTCTTGAATCTGGATGTCCACTGCCTTCCTTCAGTTTaGGAAGTTTTGGCCAGTATTTCTTCAAATAAGCTTTTTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PFGFLNLDVHCLPSV*EVLASISSNKLFAP Trigger: AGGAGCAAAAAGCTTATTTGAAGAAATACTGGCCAAAACTTCCCAAACTGAAGGAAGGCAGTGGACATCCAGATTCAAGAAGCCAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS GCA 72 bp | GCCGCCCGCTGTCCGCTGCCCGCTGCCCAGCGGTTATaGTCCCAGTCTTCTCCGCTCTTCGGCTGTTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: AARCPLPAAQRL*SQSSPLFGCSC Trigger: GCACGAACAGCCGAAGAGCGGAGAAGACTGGGAGCATAACCGCTGGGCAGCGGGCAGCGGACAGCGGGCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS GCA 72 bp | TGCAGCTCCAGGTATCCGGCAAAGTGGGGCGGTTCATaGCGCCCGCTGTCCGCTGCCCGCTGCCCAGCGGTT | + |
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Preference number: 6 (lower is better) Translates to: CSSRYPAKWGGS*RPLSAARCPAV Trigger: AACCGCTGGGCAGCGGGCAGCGGACAGCGGGCGGCATGAACCGCCCCACTTTGCCGGATACCTGGAGCTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS GCA 72 bp | GGCAAAGTGGGGCGGTTCATGCCGCCCGCTGTCCGCTaGCCGCTGCCCAGCGGTTATGCTCCCAGTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GKVGRFMPPAVR*PLPSGYAPSLL Trigger: GAGAAGACTGGGAGCATAACCGCTGGGCAGCGGGCAGCGGACAGCGGGCGGCATGAACCGCCCCACTTTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS GCA 72 bp | TCTCCGCTCTTCGGCTGTTCGTGCCCGCGGGCCCCGTaGCACCCACTCACTACTGTGTGCATCGCAGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SPLFGCSCPRAP*HPLTTVCIAAH Trigger: GTGAGCTGCGATGCACACAGTAGTGAGTGGGTGGCACGGGGCCCGCGGGCACGAACAGCCGAAGAGCGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS GCA 72 bp | TTATGCTCCCAGTCTTCTCCGCTCTTCGGCTGTTCGTaGCCGCGGGCCCCGTGCCACCCACTCACTACTGTG | + |
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Preference number: 6 (lower is better) Translates to: LCSQSSPLFGCS*PRAPCHPLTTV Trigger: CACAGTAGTGAGTGGGTGGCACGGGGCCCGCGGGCACGAACAGCCGAAGAGCGGAGAAGACTGGGAGCATAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522243.5 |
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| CDS TCA 72 bp | GGTGAAACAGAAGCCAGTCCCTTGGGGGTAGCTCTCTaGAGTGCTGGAATGTTGGACACATACTCCACTATT | + |
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Preference number: 6 (lower is better) Translates to: GETEASPLGVAL*SAGMLDTYSTI Trigger: AATAGTGGAGTATGTGTCCAACATTCCAGCACTTCAGAGAGCTACCCCCAAGGGACTGGCTTCTGTTTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS GCA 72 bp | AACAGAAGCCAGTCCCTTGGGGGTAGCTCTCTGAAGTaGTGGAATGTTGGACACATACTCCACTATTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: NRSQSLGGSSLK*WNVGHILHYSL Trigger: GAGAGAATAGTGGAGTATGTGTCCAACATTCCAGCACTTCAGAGAGCTACCCCCAAGGGACTGGCTTCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CAA 72 bp | CTTCGGATTGTTCTACTCTGGAGTCCATTTGGCTTCTaGAATCTGGATGTCCACTGCCTTCCTTCAGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: LRIVLLWSPFGF*NLDVHCLPSVW Trigger: CCAAACTGAAGGAAGGCAGTGGACATCCAGATTCAAGAAGCCAAATGGACTCCAGAGTAGAACAATCCGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS GCA 72 bp | TGGAGTCCATTTGGCTTCTTGAATCTGGATGTCCACTaGCTTCCTTCAGTTTGGGAAGTTTTGGCCAGTATT | + |
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Preference number: 6 (lower is better) Translates to: WSPFGFLNLDVH*LPSVWEVLASI Trigger: AATACTGGCCAAAACTTCCCAAACTGAAGGAAGGCAGTGGACATCCAGATTCAAGAAGCCAAATGGACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CAA 90 bp | TGTAGATGTCTTCGGATTGTTCTACTCTGGAGTCCATTTGGCTTCTaGAATCTGGATGTCCACTGCCTTCCTTCAGTTTGGGAAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CRCLRIVLLWSPFGF*NLDVHCLPSVWEVL Trigger: CAAAACTTCCCAAACTGAAGGAAGGCAGTGGACATCCAGATTCAAGAAGCCAAATGGACTCCAGAGTAGAACAATCCGAAGACATCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CAA 72 bp | CTGGATGTCCACTGCCTTCCTTCAGTTTGGGAAGTTTaGGCCAGTATTTCTTCAAATAAGCTTTTTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LDVHCLPSVWEV*ASISSNKLFAP Trigger: AGGAGCAAAAAGCTTATTTGAAGAAATACTGGCCAAAACTTCCCAAACTGAAGGAAGGCAGTGGACATCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CCA 72 bp | TGGATGTCCACTGCCTTCCTTCAGTTTGGGAAGTTTTaGCCAGTATTTCTTCAAATAAGCTTTTTGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: WMSTAFLQFGKF*PVFLQISFLLL Trigger: AAGGAGCAAAAAGCTTATTTGAAGAAATACTGGCCAAAACTTCCCAAACTGAAGGAAGGCAGTGGACATCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CAA 72 bp | ATACAGTACTTTGCTGGCAGTTTTTCTTCCAGCAGTTaGACTATATCATCCCACTTCTTTCTGACCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: IQYFAGSFSSSS*TISSHFFLTCK Trigger: CTTGCAGGTCAGAAAGAAGTGGGATGATATAGTCAAACTGCTGGAAGAAAAACTGCCAGCAAAGTACTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CAA 90 bp | TTCTTGAATCTGGATGTCCACTGCCTTCCTTCAGTTTGGGAAGTTTaGGCCAGTATTTCTTCAAATAAGCTTTTTGCTCCTTTCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FLNLDVHCLPSVWEV*ASISSNKLFAPFSF Trigger: GAAAGAGAAAGGAGCAAAAAGCTTATTTGAAGAAATACTGGCCAAAACTTCCCAAACTGAAGGAAGGCAGTGGACATCCAGATTCAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CCA 72 bp | TTCTTGAATCTGGATGTCCACTGCCTTCCTTCAGTTTaGGAAGTTTTGGCCAGTATTTCTTCAAATAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: FLNLDVHCLPSV*EVLASISSNKL Trigger: AAGCTTATTTGAAGAAATACTGGCCAAAACTTCCCAAACTGAAGGAAGGCAGTGGACATCCAGATTCAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CAA 90 bp | ACTTTCATGTTGAACATACTTTTGTTTCCATTTAACAGACTCCCATaGGCGTTTAAGTCAGATATAGTGGTGATGAACTCTCTCAGATTT | + |
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Preference number: 6 (lower is better) Translates to: TFMLNILLFPFNRLP*AFKSDIVVMNSLRF Trigger: AAATCTGAGAGAGTTCATCACCACTATATCTGACTTAAACGCCAATGGGAGTCTGTTAAATGGAAACAAAAGTATGTTCAACATGAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CAA 72 bp | GTTCTTATCCTGCTGCTTTCAAAATTCTTTGACAATTaGATTACAGTGTGTTTCCATGTAGATGTCTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: VLILLLSKFFDN*ITVCFHVDVFG Trigger: TCCGAAGACATCTACATGGAAACACACTGTAATCAAATTGTCAAAGAATTTTGAAAGCAGCAGGATAAGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CAA 72 bp | TTGAACATACTTTTGTTTCCATTTAACAGACTCCCATaGGCGTTTAAGTCAGATATAGTGGTGATGAACTCT | + |
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Preference number: 6 (lower is better) Translates to: LNILLFPFNRLP*AFKSDIVVMNS Trigger: AGAGTTCATCACCACTATATCTGACTTAAACGCCAATGGGAGTCTGTTAAATGGAAACAAAAGTATGTTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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| CDS CAA 72 bp | ACACTGCTGCTAAACTCCTCTAGTAAATCTTTCAATTaGGTCAAAGAAGCATATTGCATCTGTTACAATGTT | + |
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Preference number: 6 (lower is better) Translates to: TLLLNSSSKSFN*VKEAYCICYNV Trigger: AACATTGTAACAGATGCAATATGCTTCTTTGACCAAATTGAAAGATTTACTAGAGGAGTTTAGCAGCAGTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523483.5 |
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