Pregenerated sensors for SDC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000124145Ensembl transcript IDs: ENST00000372733.3
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAACAGAGGAGCTCTGGATaGGGCATGGTCAGTATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQQRSSG*GMVSMG Trigger: GCCCATACTGACCATGCCTCATCCAGAGCTCCTCTG...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCAGGGAGGAAGGCCACTaGGGGAGGACCTCCAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSREEGH*GRTSSQ Trigger: CTGGCTGGAGGTCCTCCCCCAGTGGCCTTCCTCCCT...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCCAGAGAGACCGGCTGTaGAAGGAAGGGAGGAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSQRDRL*KEGRKA Trigger: GGCCTTCCTCCCTTCCTTTCACAGCCGGTCTCTCTG...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCCATCCGTTAGCCCCCTaGCTTCAGAGGAGCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSHPLAP*LQRSSG Trigger: TCCAGAGCTCCTCTGAAGCCAGGGGGCTAACGGATG...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR TCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAATGGAAGTTTAAGAAGTaGTCCAATCCCAGTCTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQWKFKK*SNPSLA Trigger: GGCAAGACTGGGATTGGATCACTTCTTAAACTTCCA...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR TCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAGAGATTCCCGTAGTGTaGTCACAAGTACCCATTTAC | + |
|
Preference number: 2 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQEIPVV*SQVPIY Trigger: GTAAATGGGTACTTGTGATCACACTACGGGAATCTC...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGAAGTCAGTATTAGGTTaGCCTCACCCTACCCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: PGIYHRDSRSVITSTHLQKSVLG*PHPTLM Trigger: CATTAGGGTAGGGTGAGGTCAACCTAATACTGACTT...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR TCA 72 bp | CATCCGTTAGCCCCCTGGCTTCAGAGGAGCTCTGGATaGGGCATGGTCAGTATGGGCTTGAGGGCGGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: HPLAPWLQRSSG*GMVSMGLRADL Trigger: TAGGTCCGCCCTCAAGCCCATACTGACCATGCCTCATCCAGAGCTCCTCTGAAGCCAGGGGGCTAACGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR CAA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAATGGTCAGTATGGGCTaGAGGGCGGACCTAGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQMVSMG*RADLDS Trigger: AGAATCTAGGTCCGCCCTCAAGCCCATACTGACCAT...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCGGCACCTCCACACTCTaGCCCAGGCAGAGATATACA | + |
|
Preference number: 3 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSGTSTL*PRQRYT Trigger: TGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCC...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCCATGTGGTTACTGTATaGGATAGCACAGCCCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSHVVTV*DSTALE Trigger: CTCTAGGGCTGTGCTATCCAATACAGTAACCACATG...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCCAAGTCAGTATTAGGTaGACCTCACCCTACCCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSQVSIR*TSPYPN Trigger: ATTAGGGTAGGGTGAGGTCAACCTAATACTGACTTG...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAAGGGAGGAAGGCCACTaGGGGAGGACCTCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQREEGH*GRTSSQ Trigger: CTGGCTGGAGGTCCTCCCCCAGTGGCCTTCCTCCCT...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAGAGGACCCAGCCAGCTaGGACCCTGGGTTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQEDPAS*DPGLQW Trigger: CCACTGCAACCCAGGGTCCCAGCTGGCTGGGTCCTC...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAACCTGGGTTGCAGTGGTaGCGGGAGCTAATGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQPGLQW*RELMAT Trigger: AGTGGCCATTAGCTCCCGTCACCACTGCAACCCAGG...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAATCGTCCCAGCACAGCTaGGGCTGTGACTCGTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQSSQHS*GCDSLS Trigger: GCTTAACGAGTCACAGCCTCAGCTGTGCTGGGACGA...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCCATGGCACCGCGGACTaGAGAAGGCGCGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSHGTAD*RRRAGC Trigger: GCAGCCTGCGCGCCTTCTCCAGTCCGCGGTGCCATG...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAGTTTCTTGGGTTCGGTaGGGACTTGGCTCCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQVSWVR*GLGSQT Trigger: GGTCTGGGAGCCAAGTCCCCACCGAACCCAAGAAAC...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAACATCCGTTAGCCCCCTaGCTTCAGAGGAGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQHPLAP*LQRSSG Trigger: TCCAGAGCTCCTCTGAAGCCAGGGGGCTAACGGATG...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR GCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAAAGTCATCAGATTCCTaGCCGGGCCCCACTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQKSSDS*PGPTTS Trigger: GGATGTAGTGGGGCCCGGGCAGGAATCTGATGACTT...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR GCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAACCCACAATCAGAGCTaGCAGGACCTCCGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQTHNQS*QDLRSL Trigger: GAGAGAACGGAGGTCCTGGCAGCTCTGATTGTGGGT...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGGACGGGCGGGGGCCATaGCACCGCGGACTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQDGRGP*HRGLEK Trigger: CTTCTCCAGTCCGCGGTGCCATGGCCCCCGCCCGTC...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCGGTCCTGGGGGTCGATaGCCTCAGTCTCTCGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSGPGGR*PQSLGS Trigger: CGATCCGAGAGACTGAGGTCATCGACCCCCAGGACC...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAAAATGTGCGAGAGAATaGAGACACCTCGGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQKCARE*RHLGTS Trigger: GGAGGTGCCGAGGTGTCTTCATTCTCTCGCACATTT...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAAAAGGGCCAAGGCCATaGGGAGCGGGGTTTAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQKGPRP*GAGFKV Trigger: TACTTTAAACCCCGCTCCTCATGGCCTTGGCCCTTT...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR GCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAATGCTGCCCTGCACAGTaGTGGACATTGACACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQCCPAQ*WTLTPC Trigger: ACAAGGTGTCAATGTCCAGCACTGTGCAGGGCAGCA...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAACCAAAGAACACCAGCTaGGTCCCAAACAGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQPKNTS*VPNRRQ Trigger: CTGCCTTCTGTTTGGGACCCAGCTGGTGTTCTTTGG...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCAGCCAGCTGGGACCCTaGGTTGCAGTGGTGACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSSQLGP*VAVVTG Trigger: TCCCGTCACCACTGCAACCCAGGGTCCCAGCTGGCT...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCCAAGGGGAAGGGCACTaGGGGCAGAAGAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSQGEGH*GQKRTQ Trigger: CTGGGTCCTCTTCTGCCCCCAGTGCCCTTCCCCTTG...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGGGTTCGGTGGGGACTTaGCTCCCAGACCCTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQGSVGT*LPDPAL Trigger: GAGGGCAGGGTCTGGGAGCCAAGTCCCCACCGAACC...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAACTCTCTTCAACGGGTaGGATTCTCTTGGGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQTLFNG*DSLGDN Trigger: GTTATCCCCAAGAGAATCTCACCCGTTGAAGAGAGT...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR GCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAATGTAGATGGGTTTCTTaGCCAGGTCATAGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQCRWVS*PGHSCL Trigger: AAGGCAGCTATGACCTGGGCAAGAAACCCATCTACA...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | GACACCTCGGCACCTCCACACTCTTGCCCAGGCAGAGATATACACTCTGCACAAACGCGTAGAACTCATTaGTGGGGGCTTTCTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DTSAPPHSCPGRDIHSAQTRRTH*WGLSCR Trigger: TCTACAAGAAAGCCCCCACCAATGAGTTCTACGCGT...TTGTGCAGAGTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCCGAGGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCAGAGGATGCCCACGATaGCACCCACAATCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSRGCPR*HPQSEL Trigger: CAGCTCTGATTGTGGGTGGCATCGTGGGCATCCTCT...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCAGACGGCAAAGAGGATaGCCACGATGCCACCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSRRQRG*PRCHPQ Trigger: TTGTGGGTGGCATCGTGGGCATCCTCTTTGCCGTCT...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGCAGAGGAGCTCTGGATaGGGCATGGTCAGTATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQQRSSG*GMVSMG Trigger: GCCCATACTGACCATGCCTCATCCAGAGCTCCTCTG...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCGCACCTCCACACTCTTaGCCAGGCAGAGATATACAC | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSAPPHS*PGRDIH Trigger: GTGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGC...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGAGAGGCACCAAGGGATaGACAACTTCAGGGCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQRGTKG*TTSGPI Trigger: GATCGGCCCTGAAGTTGTCCATCCCTTGGTGCCTCT...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCTCCAACAGATGGACATaGTCTCGCTGTCAGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSSNRWT*SRCQYS Trigger: ACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGA...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGTCTCCTCTAGTTTCTTaGGTTCGGTGGGGACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQSPLVS*VRWGLG Trigger: GCCAAGTCCCCACCGAACCCAAGAAACTAGAGGAGA...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGTGCCCTGCACAGTGCTaGACATTGACACCTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQCPAQC*TLTPCW Trigger: CCAACAAGGTGTCAATGTCCAGCACTGTGCAGGGCA...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCTCTTCATACGGTACATaGGCAGTAGGATCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSSSYGT*AVGSGR Trigger: TCTTCCTGATCCTACTGCTCATGTACCGTATGAAGA...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCAAGTCAGTATTAGGTTaGCCTCACCCTACCCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSKSVLG*PHPTLM Trigger: CATTAGGGTAGGGTGAGGTCAACCTAATACTGACTT...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCTGGAAGTTTAAGAAGTaGTCCAATCCCAGTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSWKFKK*SNPSLA Trigger: GGCAAGACTGGGATTGGATCACTTCTTAAACTTCCA...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGGGGCTTTCTTGTAGATaGGTTTCTTGCCCAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQGLSCR*VSCPGH Trigger: ATGACCTGGGCAAGAAACCCATCTACAAGAAAGCCC...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGCGTAGAACTCATTGGTaGGGGCTTTCTTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQRRTHW*GLSCRW Trigger: CCATCTACAAGAAAGCCCCCACCAATGAGTTCTACG...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGGAGATTCCCGTAGTGTaGTCACAAGTACCCATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQEIPVV*SQVPIY Trigger: GTAAATGGGTACTTGTGATCACACTACGGGAATCTC...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGACATTGACACCTTGTTaGACACATCCTCACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGIYHRDSRSVITSTHLQTLTPC*THPHSL Trigger: AAGAGAGTGAGGATGTGTCCAACAAGGTGTCAATGT...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS GCA 90 bp | TCATCCAGATCTCCAGAGCCAGACAGCTCAAAGTCATCAGATTCCTaGCCGGGCCCCACTACATCCTCATCGTCTGGTAGGGCTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSRSPEPDSSKSSDS*PGPTTSSSSGRAPE Trigger: CTCCGGAGCCCTACCAGACGATGAGGATGTAGTGGGGCCCGGGCAGGAATCTGATGACTTTGAGCTGTCTGGCTCTGGAGATCTGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CAA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCGGGTTCGGTGGGGACTaGGCTCCCAGACCCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSGFGGD*APRPCP Trigger: AGGGCAGGGTCTGGGAGCCAAGTCCCCACCGAACCC...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS CCA 90 bp | CCAAGCCAGTGCCCACAAGCAAGCTTCACGCGTAGAACTCATTGGTaGGGGCTTTCTTGTAGATGGGTTTCTTGCCCAGGTCATAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSQCPQASFTRRTHW*GLSCRWVSCPGHSC Trigger: GCAGCTATGACCTGGGCAAGAAACCCATCTACAAGAAAGCCCCCACCAATGAGTTCTACGCGTGAAGCTTGCTTGTGGGCACTGGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS CCA 90 bp | AGTCCAAGCCAGTGCCCACAAGCAAGCTTCACGCGTAGAACTCATTaGTGGGGGCTTTCTTGTAGATGGGTTTCTTGCCCAGGTCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPSQCPQASFTRRTH*WGLSCRWVSCPGHS Trigger: GCTATGACCTGGGCAAGAAACCCATCTACAAGAAAGCCCCCACCAATGAGTTCTACGCGTGAAGCTTGCTTGTGGGCACTGGCTTGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CAA 90 bp | TCTAGAATAGTGCTGTCCAACAGATGGACATGCTCTCGCTGTCAGTACAGTAGCTTCTCCTCTAGTTTCTaGGGTTCGGTGGGGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRIVLSNRWTCSRCQYSSFSSSF*GSVGTW Trigger: CCAAGTCCCCACCGAACCCAAGAAACTAGAGGAGAA...GCTACTGTACTGACAGCGAGAGCATGTCCATCTGTTGGACAGCACTATTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGGGCACCTCCACACTCTaGCCCAGGCAGAGATATACA | + |
|
Preference number: 5 (lower is better) Translates to: PGIYHRDSRSVITSTHLQGTSTL*PRQRYT Trigger: TGTATATCTCTGCCTGGGCAAGAGTGTGGAGGTGCC...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGATGGTCAGTATGGGCTaGAGGGCGGACCTAGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGIYHRDSRSVITSTHLQMVSMG*RADLDS Trigger: AGAATCTAGGTCCGCCCTCAAGCCCATACTGACCAT...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGACGGGTGAGATTCTCTaGGGGATAACCTCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGIYHRDSRSVITSTHLQTGEIL*GITSFS Trigger: GGAGAATGAGGTTATCCCCAAGAGAATCTCACCCGT...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGCTGGACATTGACACCTaGTTGGACACATCCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PGIYHRDSRSVITSTHLQLDIDT*LDTSSL Trigger: GAGTGAGGATGTGTCCAACAAGGTGTCAATGTCCAG...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGTATATACCACAGAGATTCCCGTAGTGTGATCACAAGTACCCATTTACAGGACATTGACACCTTGTaGGACACATCCTCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGIYHRDSRSVITSTHLQDIDTL*DTSSLS Trigger: AGAGAGTGAGGATGTGTCCAACAAGGTGTCAATGTC...CTGTAAATGGGTACTTGTGATCACACTACGGGAATCTCTGTGGTATATACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS CCA 72 bp | AGAACAGCAGCAGCGCGAACAGACGGGCGGGGGCCATaGCACCGCGGACTGGAGAAGGCGCGCAGGCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RTAAARTDGRGP*HRGLEKARRLR Trigger: CCGCAGCCTGCGCGCCTTCTCCAGTCCGCGGTGCCATGGCCCCCGCCCGTCTGTTCGCGCTGCTGCTGTTCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS TCA 72 bp | AGAAGTATCGGCCTTCTAGGAGGTCCTGGGGGTCGATaGCCTCAGTCTCTCGGATCGACTCGGCGACTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSIGLLGGPGGR*PQSLGSTRRLR Trigger: GCGGAGTCGCCGAGTCGATCCGAGAGACTGAGGTCATCGACCCCCAGGACCTCCTAGAAGGCCGATACTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS GCA 72 bp | TCTCCAGAGCCAGACAGCTCAAAGTCATCAGATTCCTaGCCGGGCCCCACTACATCCTCATCGTCTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPEPDSSKSSDS*PGPTTSSSSGR Trigger: CCTACCAGACGATGAGGATGTAGTGGGGCCCGGGCAGGAATCTGATGACTTTGAGCTGTCTGGCTCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS CCA 72 bp | TGCCCACAAGCAAGCTTCACGCGTAGAACTCATTGGTaGGGGCTTTCTTGTAGATGGGTTTCTTGCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CPQASFTRRTHW*GLSCRWVSCPG Trigger: ACCTGGGCAAGAAACCCATCTACAAGAAAGCCCCCACCAATGAGTTCTACGCGTGAAGCTTGCTTGTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS CCA 72 bp | CAGTGCCCACAAGCAAGCTTCACGCGTAGAACTCATTaGTGGGGGCTTTCTTGTAGATGGGTTTCTTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QCPQASFTRRTH*WGLSCRWVSCP Trigger: TGGGCAAGAAACCCATCTACAAGAAAGCCCCCACCAATGAGTTCTACGCGTGAAGCTTGCTTGTGGGCACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||
| CDS CCA 72 bp | ACGCGTAGAACTCATTGGTGGGGGCTTTCTTGTAGATaGGTTTCTTGCCCAGGTCATAGCTGCCTTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: TRRTHWWGLSCR*VSCPGHSCLHP Trigger: AGGATGAAGGCAGCTATGACCTGGGCAAGAAACCCATCTACAAGAAAGCCCCCACCAATGAGTTCTACGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372733.3 |
||