RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000115884

Ensembl transcript IDs: ENST00000254351.9, ENST00000381150.5, ENST00000403076.5, ENST00000429035.1, ENST00000447124.1

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTaGAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGC +
Preference number: 1 (lower is better)
Translates to: RPQHGPERMDTGTTA*KRRRPHGSLDWPAC
Trigger: GCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 90 bp ACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTaGACTGGCCAGCCTGCCAACAGACCACCAGAAACGGGGCCACCA +
Preference number: 1 (lower is better)
Translates to: TQARLLERGGGPTAA*TGQPANRPPETGPP
Trigger: TGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR TCA 90 bp GTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTaGCCACAGCCTCAGGTCAAGCTGTGCTGGGGCCATCCACCTTCC +
Preference number: 1 (lower is better)
Translates to: VQGVCGVGLGSTPPL*PQPQVKLCWGHPPS
Trigger: GGAAGGTGGATGGCCCCAGCACAGCTTGACCTGAGGCTGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 90 bp TCTGCCCAAGACACCCCTCGTCAATTTCCAGGAGGAAGCAGCCCCTaGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGAT +
Preference number: 1 (lower is better)
Translates to: SAQDTPRQFPGGSSP*RRRHRQDGRGLQED
Trigger: ATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTTCCTCCTGGAAATTGACGAGGGGTGTCTTGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 90 bp GCCCAGGGTGGGGCCACAGGAGCTAACGGAGAACCTGGCCTTGGATaGAGGCGCTCAGAGCCAGCTCTGCCCAAGACACCCCTCGTCAAT +
Preference number: 1 (lower is better)
Translates to: AQGGATGANGEPGLG*RRSEPALPKTPLVN
Trigger: ATTGACGAGGGGTGTCTTGGGCAGAGCTGGCTCTGAGCGCCTCCATCCAAGGCCAGGTTCTCCGTTAGCTCCTGTGGCCCCACCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 90 bp AAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTaGCAGCGGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACA +
Preference number: 1 (lower is better)
Translates to: KAESQHSLLTRASPT*QRPRPQHGPERMDT
Trigger: TGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTCAGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR GCA 90 bp CTAACGGAGAACCTGGCCTTGGATGGAGGCGCTCAGAGCCAGCTCTaGCCAAGACACCCCTCGTCAATTTCCAGGAGGAAGCAGCCCCTG +
Preference number: 1 (lower is better)
Translates to: LTENLALDGGAQSQL*PRHPSSISRRKQPL
Trigger: CAGGGGCTGCTTCCTCCTGGAAATTGACGAGGGGTGTCTTGGGCAGAGCTGGCTCTGAGCGCCTCCATCCAAGGCCAGGTTCTCCGTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR GCA 90 bp TCCAGGCCGGTGGGTTCTGGAGACGTGGGAATAGCCGTCAGGAGCTaGGTGTCCTTCCAAGTGGAGGGGGTCTGCTGTGACAAGGTGATA +
Preference number: 1 (lower is better)
Translates to: SRPVGSGDVGIAVRS*VSFQVEGVCCDKVI
Trigger: TATCACCTTGTCACAGCAGACCCCCTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCCCACGTCTCCAGAACCCACCGGCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR TCA 90 bp TATCGAATACCGGACACAGGTTCCCTTGGCTTGGTGGTGCATCTCTaGTCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGTCGC +
Preference number: 1 (lower is better)
Translates to: YRIPDTGSLGLVVHL*STDWPTSRSGQRSR
Trigger: GCGACTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGGAACCTGTGTCCGGTATTCGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 90 bp AGTCGCAGTATCGAATACCGGACACAGGTTCCCTTGGCTTGGTGGTaGATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAAC +
Preference number: 1 (lower is better)
Translates to: SRSIEYRTQVPLAWW*ISDPQTGPPLGVAN
Trigger: GTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGGAACCTGTGTCCGGTATTCGATACTGCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 90 bp GGAATAGCCGTCAGGAGCTGCGTGTCCTTCCAAGTGGAGGGGGTCTaGTGTGACAAGGTGATATCTTGCAAAGCACCTGCACCTGAGCCG +
Preference number: 1 (lower is better)
Translates to: GIAVRSCVSFQVEGV*CDKVISCKAPAPEP
Trigger: CGGCTCAGGTGCAGGTGCTTTGCAAGATATCACCTTGTCACAGCAGACCCCCTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR CCA 90 bp TTAGGTCCAAAGCAGTCGGATCCCCCTCCCCTCCAGAGCTGGACCTaGGGAGAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTG +
Preference number: 1 (lower is better)
Translates to: LGPKQSDPPPLQSWT*GEAASVWRNRVRMV
Trigger: CACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTCTCCCCAGGTCCAGCTCTGGAGGGGAGGGGGATCCGACTGCTTTGGACCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 90 bp CTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTaGTGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCC +
Preference number: 1 (lower is better)
Translates to: LLQFGETESEWCDAR*WLWWKGPMRETPGA
Trigger: GGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 90 bp GGAGAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATaGCAGGTGCTGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCC +
Preference number: 1 (lower is better)
Translates to: GEAASVWRNRVRMVR*QVLAVVERSYARNP
Trigger: GGGGTTTCTCGCATAGGACCTTTCCACCACAGCCAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 90 bp TTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGGCTGTaGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTC +
Preference number: 1 (lower is better)
Translates to: FGETESEWCDARCWL*WKGPMRETPGALSL
Trigger: GAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 90 bp CTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTaGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTA +
Preference number: 1 (lower is better)
Translates to: LQFGETESEWCDARC*LWWKGPMRETPGAL
Trigger: TAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 90 bp ATGACAAGTACCGTTTATTGTCGTTACACAAATGAACCCAGCCTCTaGCTTGGGCACCGTCCCACGGACCAGCAGATGAGCATGGTCAGC +
Preference number: 1 (lower is better)
Translates to: MTSTVYCRYTNEPSL*LGHRPTDQQMSMVS
Trigger: GCTGACCATGCTCATCTGCTGGTCCGTGGGACGGTGCCCAAGCCAGAGGCTGGGTTCATTTGTGTAACGACAATAAACGGTACTTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 90 bp CGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTaGAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAG +
Preference number: 1 (lower is better)
Translates to: RRHRDSSQVSQHVGV*RKVRSRHTQHRGKK
Trigger: CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 90 bp GGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTaGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGG +
Preference number: 1 (lower is better)
Translates to: GKTKAQRFEPSFPTC*CLQKSPVTSHTAQR
Trigger: CCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 90 bp AAAAGCAAATACACAGAGGGACCCTGGAACCAGAATCCCTCCCCATaGGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACAT +
Preference number: 1 (lower is better)
Translates to: KSKYTEGPWNQNPSP*ERRRHRDSSQVSQH
Trigger: ATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTCTGTGTATTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 90 bp TCAAGCTGTGCTGGGGCCATCCACCTTCCTTTGCCATTTAGAAGATaGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATA +
Preference number: 1 (lower is better)
Translates to: SSCAGAIHLPLPFRR*GLELGNTEIDISLI
Trigger: TATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGGCCCCAGCACAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR TCA 90 bp AGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCACACATaGGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTT +
Preference number: 1 (lower is better)
Translates to: RNGATRQIVHTLLHT*ATNSRDNTQTKPTF
Trigger: AAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 90 bp TTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTaGCTGAACCTACCGACCTCCAGGAGAATTTCAGCCAAAACAAAA +
Preference number: 1 (lower is better)
Translates to: LELGNTEIDISLIKP*LNLPTSRRISAKTK
Trigger: TTTTGTTTTGGCTGAAATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 90 bp ACCGAATCAACTTACTTAACTTACCTCAGAAGTAACAAGGTCTACTaGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAAACAAGT +
Preference number: 1 (lower is better)
Translates to: TESTYLTYLRSNKVY*AMNKELEETCAKTS
Trigger: ACTTGTTTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACTTCTGAGGTAAGTTAAGTAAGTTGATTCGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR-3UTR CCA 90 bp AGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTTGGGGGCCTAGTGAGTaGCAGGGCGGAGGGGGCGCA +
Preference number: 2 (lower is better)
Translates to: RQDGRGLQEDLQAPAALPWGPSE*QGGGGA
Trigger: TGCGCCCCCTCCGCCCTGCCACTCACTAGGCCCCCA...AGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCCGGGCTTCTCCAACGTaGCAGCGGCCCAGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPRASPT*QRPRPQ
Trigger: CTGAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCG...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR-3UTR TCA 90 bp AGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTAGTGCTACAGGTGTGTaGGCCCCAAGCCCCACCCGC +
Preference number: 2 (lower is better)
Translates to: RQDGRGLQEDLQAPAALPSATGV*APSPTR
Trigger: GCGGGTGGGGCTTGGGGCTCACACACCTGTAGCACT...AGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR TCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCGCCTCAGCATGGCCCTaGGCGCATGGACACAGGCAC +
Preference number: 2 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPASAWP*AHGHRH
Trigger: GTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGC...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR-3UTR CCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCCACGGCAGCCTGGACTaGCCAGCCTGCCAACAGACC +
Preference number: 2 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPHGSLD*PACQQT
Trigger: GGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTG...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CAA 90 bp CCAGGGCCCAGGGTGGGGCCACAGGAGCTAACGGAGAACCTGGCCTaGGATGGAGGCGCTCAGAGCCAGCTCTGCCCAAGACACCCCTCG +
Preference number: 2 (lower is better)
Translates to: PGPRVGPQELTENLA*DGGAQSQLCPRHPS
Trigger: CGAGGGGTGTCTTGGGCAGAGCTGGCTCTGAGCGCCTCCATCCAAGGCCAGGTTCTCCGTTAGCTCCTGTGGCCCCACCCTGGGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR-3UTR GCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCACCGAGTCAGAATGGTaGGATGCCAGGTGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPTESEW*DARCWL
Trigger: CAGCCAGCACCTGGCATCGCACCATTCTGACTCGGT...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp AGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTCAAGGAAGAGGCAAGTaGGGGCCTAGTGAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: RQDGRGLQEDLQAPAALPQGRGK*GPSEWQ
Trigger: CTGCCACTCACTAGGCCCCCACTTGCCTCTTCCTTG...AGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCGCCAGGTGCTGGCTGTaGTGGAAAGGTCCTATGCGA +
Preference number: 2 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPARCWL*WKGPMR
Trigger: TCGCATAGGACCTTTCCACCACAGCCAGCACCTGGC...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp AAGCAGCCCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGACTCCAGAGCTGGACCTaGGGAGAGGCTGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: KQPLETAPQAGRAWSAGGLQSWT*GEAASV
Trigger: AACTGAAGCAGCCTCTCCCCAGGTCCAGCTCTGGAG...TCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACACAGGCAGGACGGGCGTaGTCTGCAGGAGGATCTCCA +
Preference number: 2 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTQAGRA*SAGGSP
Trigger: TGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTG...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCGGGGAGGCCAGGGCCTaGAGTTCTTCAAGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLGEARA*SSSRKR
Trigger: CCTCTTCCTTGAAGAACTGCAGGCCCTGGCCTCCCC...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR TCA 90 bp AAGCAGCCCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGAGATCTTCCAGCCACATaGGGCCATTTAGGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: KQPLETAPQAGRAWSAGGDLPAT*GHLGPK
Trigger: CTTTGGACCTAAATGGCCTCATGTGGCTGGAAGATC...TCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACAACCGAGTCAGAATGGTaGGATGCCAGGTGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTTESEW*DARCWL
Trigger: CAGCCAGCACCTGGCATCGCACCATTCTGACTCGGT...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCGTCAGAGAAGCAGAGTaGAGCTCCCAGCACACCCCA +
Preference number: 2 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLVREAE*SSQHTP
Trigger: TGGGGTGTGCTGGGAGCTCCACTCTGCTTCTCTGAC...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp CATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGATATGCGAGAAACCCCTaGTGCCCTAAGTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: HGHRHDCLKEAAAPRQPGYARNP*CPKSPG
Trigger: GCCTGGAGACTTAGGGCACCAGGGGTTTCTCGCATA...TCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTGCGATGCCAGGTGCTaGCTGTGGTGGAAAGGTCCT +
Preference number: 2 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQACDARC*LWWKGP
Trigger: AGGACCTTTCCACCACAGCCAGCACCTGGCATCGCA...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAACTCCAGAGCTGGACCTaGGGAGAGGCTGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: GPGLSMALSAWTQARLLELQSWT*GEAASV
Trigger: AACTGAAGCAGCCTCTCCCCAGGTCCAGCTCTGGAG...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACACCCCACGAAACAAAGTaGACTCCTGTCCCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTPHETK*TPVPCH
Trigger: GTGGCAGGGGACAGGAGTCCACTTTGTTTCGTGGGG...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGCACCCCACGACTCCGTaGGCAGGAGCGACCAGAGGG +
Preference number: 2 (lower is better)
Translates to: EAASVWRNRVRMVRCQVLHPTTP*AGATRG
Trigger: CCCTCTGGTCGCTCCTGCCCACGGAGTCGTGGGGTG...CAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp TGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCCTCCCCTCCAGAGCTaGACCTGGGGAGAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: CQQTTRNGATRQIVHTLLPPLQS*TWGEAA
Trigger: AGCAGCCTCTCCCCAGGTCCAGCTCTGGAGGGGAGG...CAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GAGGTGGAGGCAGCTGTAGCCTCCAGGCCGGTGGGTTCTGGAGACGTGGGAATAGTAGCCACAATTTGCTaGGAAGCAGGGAGGGCGCTT +
Preference number: 2 (lower is better)
Translates to: EVEAAVASRPVGSGDVGIVATIC*EAGRAL
Trigger: AAGCGCCCTCCCTGCTTCCCAGCAAATTGTGGCTAC...TATTCCCACGTCTCCAGAACCCACCGGCCTGGAGGCTACAGCTGCCTCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR-3UTR TCA 90 bp TCTGGAGACGTGGGAATAGCCGTCAGGAGCTGCGTGTCCTTCCAAGTGGAGGGGCAAAGCACCTGCACCTaGGCCGGAGAAGTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: SGDVGIAVRSCVSFQVEGQSTCT*AGEVVR
Trigger: TCTGACAACTTCTCCGGCTCAGGTGCAGGTGCTTTG...CCCCTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCCCACGTCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR-3UTR GCA 90 bp CCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATTCGAGCGCTCAGAGCCAGCTCTaGCCAAGACACCCCTCGTCA +
Preference number: 2 (lower is better)
Translates to: PWNQNPSPWERRRHRDSSAQSQL*PRHPSS
Trigger: TGACGAGGGGTGTCTTGGGCAGAGCTGGCTCTGAGC...GCTCGAATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp AGCCTCCAGGCCGGTGGGTTCTGGAGACGTGGGAATAGCCGTCAGGAGCTGCGTCAAGTGGAGGGGGTCTaGTGTGACAAGGTGATATCT +
Preference number: 2 (lower is better)
Translates to: SLQAGGFWRRGNSRQELRQVEGV*CDKVIS
Trigger: AGATATCACCTTGTCACAGCAGACCCCCTCCACTTG...ACGCAGCTCCTGACGGCTATTCCCACGTCTCCAGAACCCACCGGCCTGGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR-3UTR CCA 90 bp GGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGAGGTGCTGGCTGTGGTaGAAAGGTCCTATGCGAGAA +
Preference number: 2 (lower is better)
Translates to: GGASLIHRLAHLSEWPTERCWLW*KGPMRE
Trigger: TTCTCGCATAGGACCTTTCCACCACAGCCAGCACCT...CTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGCAGAATCCCTCCCCATaGGAAAGACGAAGGCACAGA +
Preference number: 2 (lower is better)
Translates to: GGASLIHRLAHLSEWPTEQNPSP*ERRRHR
Trigger: TCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTG...CTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR TCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGAGTGCTACAGGTGTGTaGGCCCCAAGCCCCACCCGC +
Preference number: 2 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKSATGV*APSPTR
Trigger: GCGGGTGGGGCTTGGGGCTCACACACCTGTAGCACT...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp GACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCACACATGGGGGAGGCCAGGGCCTaGAGTTCTTCAAGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: DHQKRGHQTDSPYPVAHMGEARA*SSSRKR
Trigger: CCTCTTCCTTGAAGAACTGCAGGCCCTGGCCTCCCC...CATGTGTGCAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACACCATCCACCTTCCTTTaGCATTTAGAAGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTPSTFL*HLEDGA
Trigger: AGCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGG...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp CATGTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGCACGGCAGCCTGGACTaGCCAGCCTGCCAACAGACC +
Preference number: 2 (lower is better)
Translates to: HVGVCRKVRSRHTQHRGKHGSLD*PACQQT
Trigger: GGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTG...CTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGGGCCCCACGGCAGCCTaGACTGGCCAGCCTGCCAAC +
Preference number: 2 (lower is better)
Translates to: GKTKAQRFEPSFPTCWCLGPTAA*TGQPAN
Trigger: GTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCC...CAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGGGACACAGGCACGACTaGTTGAAAGAGGCGGCGGCC +
Preference number: 2 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKGHRHD*LKEAAA
Trigger: GGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCC...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGTGGGGGCCTAGTGAGTaGCAGGGCGGAGGGGGCGCA +
Preference number: 2 (lower is better)
Translates to: WGLELGNTEIDISLIKPWWGPSE*QGGGGA
Trigger: TGCGCCCCCTCCGCCCTGCCACTCACTAGGCCCCCA...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGGAGGCTGCTTCAGTTTaGAGAAACCGAGTCAGAATG +
Preference number: 2 (lower is better)
Translates to: GGASLIHRLAHLSEWPTEEAASV*RNRVRM
Trigger: CATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC...CTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACAAAGAAGCGAAGGCAGTaGCATTCACAGGACTACTTT +
Preference number: 2 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTKKRRQ*HSQDYF
Trigger: AAAGTAGTCCTGTGAATGCCACTGCCTTCGCTTCTT...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR TCA 90 bp CCCCACCCCCGAGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCACAGTCCTCTCTGTCTaGAGGCTGAGTCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: PHPRVMCSHTLQAESRSITVLSV*RLSPSI
Trigger: AATGCTGGGACTCAGCCTTCAGACAGAGAGGACTGT...GATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACTCGGGGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp TGGAGACGTGGGAATAGCCGTCAGGAGCTGCGTGTCCTTCCAAGTGGAGGGGGTGACAAGGTGATATCTTaGAAAGCACCTGCACCTGAG +
Preference number: 2 (lower is better)
Translates to: WRRGNSRQELRVLPSGGGDKVIS*KAPAPE
Trigger: CTCAGGTGCAGGTGCTTTGCAAGATATCACCTTGTC...ACCCCCTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCCCACGTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR-3UTR GCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGTGGTGCGATGCCAGGTaGTGGCTGTGGTGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKWCDAR*WLWWKG
Trigger: ACCTTTCCACCACAGCCAGCACCTGGCATCGCACCA...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp CATGTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGGTCAGAGAAGCAGAGTaGAGCTCCCAGCACACCCCA +
Preference number: 2 (lower is better)
Translates to: HVGVCRKVRSRHTQHRGKVREAE*SSQHTP
Trigger: TGGGGTGTGCTGGGAGCTCCACTCTGCTTCTCTGAC...CTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp CATGTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGATGGCCCTGAGCGCATaGACACAGGCACGACTGCTT +
Preference number: 2 (lower is better)
Translates to: HVGVCRKVRSRHTQHRGKMALSA*TQARLL
Trigger: AAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCAT...CTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp AAGACTATCACTCTTTGGAAAATATTCCTGATTCCAGCCCAGGGCCCAGGGTGGCTGGACTGGCCAGCCTaGCAACAGACCACCAGAAAC +
Preference number: 2 (lower is better)
Translates to: KTITLWKIFLIPAQGPGWLDWPA*QQTTRN
Trigger: GTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAG...CCACCCTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAAGAGTGATAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR-3UTR CCA 90 bp CATGTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGTATGCGAGAAACCCCTaGTGCCCTAAGTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: HVGVCRKVRSRHTQHRGKYARNP*CPKSPG
Trigger: GCCTGGAGACTTAGGGCACCAGGGGTTTCTCGCATA...CTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GAGGGACCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATGAGGCTGCTTCAGTTTaGAGAAACCGAGTCAGAATG +
Preference number: 2 (lower is better)
Translates to: EGPWNQNPSPWERRRHRDEAASV*RNRVRM
Trigger: CATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC...ATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp AGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACGACCTGGGGAGAGGCTaGTTCAGTTTGGAGAAACCG +
Preference number: 2 (lower is better)
Translates to: SHVQSYTPGRKSQYRIPDDLGRG*FSLEKP
Trigger: CGGTTTCTCCAAACTGAAGCAGCCTCTCCCCAGGTC...GTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACAACTAGAGGAAACATGTaGAAAAACAAGTCGATATCT +
Preference number: 2 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTTRGNM*KNKSIS
Trigger: AGATATCGACTTGTTTTTGCACATGTTTCCTCTAGT...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAATGCGATGCCAGGTGCTaGCTGTGGTGGAAAGGTCCT +
Preference number: 2 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAECDARC*LWWKGP
Trigger: AGGACCTTTCCACCACAGCCAGCACCTGGCATCGCA...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCCCCACGAAACAAAGTaGACTCCTGTCCCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: GKTKAQRFEPSFPTCWCLPHETK*TPVPCH
Trigger: GTGGCAGGGGACAGGAGTCCACTTTGTTTCGTGGGG...CAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CAA 90 bp GGGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTaGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: GKDEGTEIRAKFPNM*VFAEKSGHVTHSTE
Trigger: CTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGTGGTGCGATGCCAGGTaGTGGCTGTGGTGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: WGLELGNTEIDISLIKPWWCDAR*WLWWKG
Trigger: ACCTTTCCACCACAGCCAGCACCTGGCATCGCACCA...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGGTCAGAATGGTGCGATaGCAGGTGCTGGCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: WGLELGNTEIDISLIKPWVRMVR*QVLAVV
Trigger: CACCACAGCCAGCACCTGGCATCGCACCATTCTGAC...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR GCA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAAGACCTGGGGAGAGGCTaGTTCAGTTTGGAGAAACCG +
Preference number: 2 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAEDLGRG*FSLEKP
Trigger: CGGTTTCTCCAAACTGAAGCAGCCTCTCCCCAGGTC...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAAGAAACCGAGTCAGAATaGTGCGATGCCAGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAEETESE*CDARCW
Trigger: CCAGCACCTGGCATCGCACCATTCTGACTCGGTTTC...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CAA 90 bp ACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTaGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAA +
Preference number: 2 (lower is better)
Translates to: TKAQRFEPSFPTCWC*QKSPVTSHTAQRQE
Trigger: TTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR TCA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGGATCTTCCAGCCACATaGGGCCATTTAGGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQDLPAT*GHLGPK
Trigger: CTTTGGACCTAAATGGCCTCATGTGGCTGGAAGATC...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR TCA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTTTTGGAAAATATTCCTaGTTCCAGCCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: IDISLIKPWLNLPTSRRIFGKYS*FQPRAQ
Trigger: CTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAA...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAACAAGGAAGAGGCAAGTaGGGGCCTAGTGAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: SNKVYWAMNKELEETCAKQGRGK*GPSEWQ
Trigger: CTGCCACTCACTAGGCCCCCACTTGCCTCTTCCTTG...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAAATTAGGGAAGCAAGATaGGGGGATACCGAATCAACT +
Preference number: 2 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAEIREAR*GDTEST
Trigger: AGTTGATTCGGTATCCCCCCATCTTGCTTCCCTAAT...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGATTAGGGAAGCAAGATaGGGGGATACCGAATCAACT +
Preference number: 2 (lower is better)
Translates to: WGLELGNTEIDISLIKPWIREAR*GDTEST
Trigger: AGTTGATTCGGTATCCCCCCATCTTGCTTCCCTAAT...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGAGTAACAAGGTCTACTaGGCTATGAACAAAGAACTA +
Preference number: 2 (lower is better)
Translates to: WGLELGNTEIDISLIKPWSNKVY*AMNKEL
Trigger: TAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 72 bp CAGCCCCTGGAGACGGCGCCACAGGCAGGACGGGCGTaGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCT +
Preference number: 3 (lower is better)
Translates to: QPLETAPQAGRA*SAGGSPGPCRP
Trigger: AGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR GCA 72 bp AGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTaGCAACAGACCACCAGAAACGGGGCCACCAGACAG +
Preference number: 3 (lower is better)
Translates to: RRRPHGSLDWPA*QQTTRNGATRQ
Trigger: CTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 72 bp GGCAGCGGCCCAGGCCTCAGCATGGCCCTGAGCGCATaGACACAGGCACGACTGCTTGAAAGAGGCGGCGGC +
Preference number: 3 (lower is better)
Translates to: GSGPGLSMALSA*TQARLLERGGG
Trigger: GCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCCGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR TCA 72 bp CATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTaGAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGG +
Preference number: 3 (lower is better)
Translates to: HGPERMDTGTTA*KRRRPHGSLDW
Trigger: CCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 72 bp AGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTaGGCAGGAGCGACCAGAGGGGCTGGAATGCTGGGG +
Preference number: 3 (lower is better)
Translates to: SRVELPAHPTTP*AGATRGAGMLG
Trigger: CCCCAGCATTCCAGCCCCTCTGGTCGCTCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR TCA 72 bp GTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTaGCCACAGCCTCAGGTCAAGCTGTGCTGGGGCCAT +
Preference number: 3 (lower is better)
Translates to: VCGVGLGSTPPL*PQPQVKLCWGH
Trigger: ATGGCCCCAGCACAGCTTGACCTGAGGCTGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 72 bp CGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTaGACTGGCCAGCCTGCCAACAGACCACCAGAAACG +
Preference number: 3 (lower is better)
Translates to: RLLERGGGPTAA*TGQPANRPPET
Trigger: CGTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 72 bp TCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTaGCAGCGGCCCAGGCCTCAGCATGGCCCTGAGCGC +
Preference number: 3 (lower is better)
Translates to: SQHSLLTRASPT*QRPRPQHGPER
Trigger: GCGCTCAGGGCCATGCTGAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 72 bp GGTGGAGGCAGCTGTAGCCTCCAGGCCGGTGGGTTCTaGAGACGTGGGAATAGCCGTCAGGAGCTGCGTGTC +
Preference number: 3 (lower is better)
Translates to: GGGSCSLQAGGF*RRGNSRQELRV
Trigger: GACACGCAGCTCCTGACGGCTATTCCCACGTCTCCAGAACCCACCGGCCTGGAGGCTACAGCTGCCTCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR-3UTR CAA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGAGGCTGCTTCAGTTaGGAGAAACCGAGTCAGAAT +
Preference number: 3 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLARGCFS*EKPSQN
Trigger: ATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTCT...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR TCA 72 bp CCGGACACAGGTTCCCTTGGCTTGGTGGTGCATCTCTaGTCCACAGACTGGCCCACCTCTCGGAGTGGCCAA +
Preference number: 3 (lower is better)
Translates to: PDTGSLGLVVHL*STDWPTSRSGQ
Trigger: TTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGGAACCTGTGTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 72 bp GTGGGTTCTGGAGACGTGGGAATAGCCGTCAGGAGCTaGGTGTCCTTCCAAGTGGAGGGGGTCTGCTGTGAC +
Preference number: 3 (lower is better)
Translates to: VGSGDVGIAVRS*VSFQVEGVCCD
Trigger: GTCACAGCAGACCCCCTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCCCACGTCTCCAGAACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR-3UTR CAA 90 bp TCTGGAGACGTGGGAATAGCCGTCAGGAGCTGCGTGTCCTTCCAAGTGGAGGGGCCTGAGCCGGAGAAGTaGTCAGAGTCATCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: SGDVGIAVRSCVSFQVEGPEPEK*SESSPE
Trigger: CTCTGGGGATGACTCTGACAACTTCTCCGGCTCAGG...CCCCTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCCCACGTCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR GCA 72 bp AACCTGGCCTTGGATGGAGGCGCTCAGAGCCAGCTCTaGCCAAGACACCCCTCGTCAATTTCCAGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: NLALDGGAQSQL*PRHPSSISRRK
Trigger: CTTCCTCCTGGAAATTGACGAGGGGTGTCTTGGGCAGAGCTGGCTCTGAGCGCCTCCATCCAAGGCCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 72 bp ACCGAGTCAGAATGGTGCGATGCCAGGTGCTGGCTGTaGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: TESEWCDARCWL*WKGPMRETPGA
Trigger: GGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCAGCACCTGGCATCGCACCATTCTGACTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 72 bp ATCGAATACCGGACACAGGTTCCCTTGGCTTGGTGGTaGATCTCTGATCCACAGACTGGCCCACCTCTCGGA +
Preference number: 3 (lower is better)
Translates to: IEYRTQVPLAWW*ISDPQTGPPLG
Trigger: TCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGGAACCTGTGTCCGGTATTCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 72 bp GGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTaGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCT +
Preference number: 3 (lower is better)
Translates to: GETESEWCDARC*LWWKGPMRETP
Trigger: AGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CAA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAACACAGGCACGACTGCTaGAAAGAGGCGGCGGCCCCA +
Preference number: 3 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAEHRHDC*KEAAAP
Trigger: TGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CAA 90 bp CCCCACCCCCGAGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGCCATCCACCTTCCTTaGCCATTTAGAAGATGGGGC +
Preference number: 3 (lower is better)
Translates to: PHPRVMCSHTLQAESRSIAIHLP*PFRRWG
Trigger: GCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGGC...GATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACTCGGGGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 72 bp GCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATaGCAGGTGCTGGCTGTGGTGGAAAGGTCCTATGCG +
Preference number: 3 (lower is better)
Translates to: ASVWRNRVRMVR*QVLAVVERSYA
Trigger: CGCATAGGACCTTTCCACCACAGCCAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 72 bp GTCAGGAGCTGCGTGTCCTTCCAAGTGGAGGGGGTCTaGTGTGACAAGGTGATATCTTGCAAAGCACCTGCA +
Preference number: 3 (lower is better)
Translates to: VRSCVSFQVEGV*CDKVISCKAPA
Trigger: TGCAGGTGCTTTGCAAGATATCACCTTGTCACAGCAGACCCCCTCCACTTGGAAGGACACGCAGCTCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
3UTR CCA 72 bp GCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTaGCCAACGGAGTCGCTGAAACGTTGTCAAATAAGC +
Preference number: 3 (lower is better)
Translates to: ASLIHRLAHLSE*PTESLKRCQIS
Trigger: GCTTATTTGACAACGTTTCAGCGACTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 72 bp TTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTaGTGGCTGTGGTGGAAAGGTCCTATGCGAGAAACC +
Preference number: 3 (lower is better)
Translates to: FGETESEWCDAR*WLWWKGPMRET
Trigger: GGTTTCTCGCATAGGACCTTTCCACCACAGCCAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 72 bp TACACAGAGGGACCCTGGAACCAGAATCCCTCCCCATaGGAAAGACGAAGGCACAGAGATTCGAGCCAAGTT +
Preference number: 3 (lower is better)
Translates to: YTEGPWNQNPSP*ERRRHRDSSQV
Trigger: AACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTCTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR-3UTR CAA 90 bp AGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACGCCATCCACCTTCCTTaGCCATTTAGAAGATGGGGC +
Preference number: 3 (lower is better)
Translates to: SHVQSYTPGRKSQYRIPDAIHLP*PFRRWG
Trigger: GCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGGC...GTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR TCA 72 bp CGAAATGACAAGTACCGTTTATTGTCGTTACACAAATaGACCCAGCCTCTGGCTTGGGCACCGTCCCACGGA +
Preference number: 3 (lower is better)
Translates to: RNDKYRLLSLHK*TQPLAWAPSHG
Trigger: TCCGTGGGACGGTGCCCAAGCCAGAGGCTGGGTTCATTTGTGTAACGACAATAAACGGTACTTGTCATTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 72 bp GCTGGGGCCATCCACCTTCCTTTGCCATTTAGAAGATaGGGCTTGGAGCTTGGCAACACAGAAATTGACATC +
Preference number: 3 (lower is better)
Translates to: AGAIHLPLPFRR*GLELGNTEIDI
Trigger: GATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR GCA 72 bp AGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTaGAGAAAAGTCCGGTCACGTCACACACAGCACAGA +
Preference number: 3 (lower is better)
Translates to: RDSSQVSQHVGV*RKVRSRHTQHR
Trigger: TCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 72 bp AAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTaGTGTTTGCAGAAAAGTCCGGTCACGTCACACACA +
Preference number: 3 (lower is better)
Translates to: KAQRFEPSFPTC*CLQKSPVTSHT
Trigger: TGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR TCA 72 bp GCCACCAGACAGATAGTCCATACCCTGTTGCACACATaGGCGACAAACTCAAGAGACAACACACAAACTAAG +
Preference number: 3 (lower is better)
Translates to: ATRQIVHTLLHT*ATNSRDNTQTK
Trigger: CTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGTATGGACTATCTGTCTGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
3UTR CCA 72 bp GGCAACACAGAAATTGACATCAGCCTTATAAAACCTTaGCTGAACCTACCGACCTCCAGGAGAATTTCAGCC +
Preference number: 3 (lower is better)
Translates to: GNTEIDISLIKP*LNLPTSRRISA
Trigger: GGCTGAAATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CCA 72 bp CGTCACACACAGCACAGAGGCAAGAAGCGAAGGCAGTaGCATTCACAGGACTACTTTATATTAAAGTTTATT +
Preference number: 3 (lower is better)
Translates to: RHTQHRGKKRRQ*HSQDYFILKFI
Trigger: AATAAACTTTAATATAAAGTAGTCCTGTGAATGCCACTGCCTTCGCTTCTTGCCTCTGTGCTGTGTGTGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp AGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTGCTCTCTTGGGCGCCTaGCCAGCGCGCCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RQDGRGLQEDLQAPAALPALLGA*PARRCP
Trigger: GGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGC...AGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCAGGAGCCCTGGGCTaGGGGCCTCTGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPAAGALG*GPLASA
Trigger: TGCAGAGGCCAGAGGCCCCCAGCCCAGGGCTCCTGC...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCCCTGCTCCCGGGCGGTaGGGCCAGGCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPPAPGR*GQAPLL
Trigger: CAGAAGTGGAGCCTGGCCTCACCGCCCGGGAGCAGG...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp AGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTGGGGCCTCTGGCCTCTaGAGCCGGGTGGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RQDGRGLQEDLQAPAALPGASGL*SRVGGG
Trigger: TCCTCCTCCCACCCGGCTGCAGAGGCCAGAGGCCCC...AGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGGCAGGGTCCGCCGGCTaGAGTCCGCTCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: GATGRTGVVCRRISRPLPAGSAG*SPLSTA
Trigger: GGCAGTAGAGAGCGGACTCCAGCCGGCGGACCCTGC...CGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCCCACGGACCAGCAGATaGGCATGGTCAGCCGACCCC +
Preference number: 4 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPAPRTSR*AWSADP
Trigger: GGGGTCGGCTGACCATGCTCATCTGCTGGTCCGTGG...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGAGCTCTCTTGGGCGCCTaGCCAGCGCGCCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LERGGGPTAAWTGQPANRALLGA*PARRCP
Trigger: GGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGC...TCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGGGTTCCGCTGCTCGATaGTCTCTTGGGCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GATGRTGVVCRRISRPLPGSAAR*SLGRLP
Trigger: GGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACC...CGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCACCCAGCCTCTGGCTTaGGCACCGTCCCACGGACCA +
Preference number: 4 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPATQPLA*APSHGP
Trigger: TGGTCCGTGGGACGGTGCCCAAGCCAGAGGCTGGGT...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGAAGCTCGGCTGCTCCCTaGGTGGTGGGGCCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LERGGGPTAAWTGQPANRSSAAP*VVGPRR
Trigger: GCGCCTCGGCCCCACCACCCAGGGAGCAGCCGAGCT...TCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS-3UTR CCA 90 bp ACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCTCCCGCTCCTCCGGTaGCCGAACGTCGCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: TAPQAGRAWSAGGSPGPCLPLLR*PNVAFG
Trigger: CCCGAAAGCGACGTTCGGCCACCGGAGGAGCGGGAG...GCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS-3UTR TCA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGGTGGCTGTGGTCGTTaGGGCCAGATGAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPAGGCGR*GQMSGR
Trigger: CCGACCACTCATCTGGCCTCAACGACCACAGCCACC...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp ACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCACAGGCACGACTGCTTaGAAGAGGCGGCGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TAPQAGRAWSAGGSPGPCTGTTA*KRRRPH
Trigger: GTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGT...GCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGAGTCCCAGGCGAGGGCTaGAGGGTCCGCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HGHRHDCLKEAAAPRQPGVPGEG*RVRRLE
Trigger: CTCCAGCCGGCGGACCCTGCAGCCCTCGCCTGGGAC...TCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp ACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCGCTCCTGGGCCGTGGTaGCTGTGGTCGTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TAPQAGRAWSAGGSPGPCAPGPW*LWSLRP
Trigger: TGGCCTCAACGACCACAGCCACCACGGCCCAGGAGC...GCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCCGGGCTCCTGGGCCGTaGTGGCTGTGGTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLARAPGP*WLWSLR
Trigger: CCTCAACGACCACAGCCACCACGGCCCAGGAGCCCG...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp ACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCGGTGGCTGTGGTCGTTaGGGCCAGATGAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: TAPQAGRAWSAGGSPGPCGGCGR*GQMSGR
Trigger: CCGACCACTCATCTGGCCTCAACGACCACAGCCACC...GCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp GGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGGTCCAGGAGGCCCTGTaGGGCCCCCGTGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GGASLIHRLAHLSEWPTEVQEAL*GPRGPL
Trigger: CAGGGGGCCACGGGGGCCTCACAGGGCCTCCTGGAC...CTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGAGTCCGCTCTCTACTaGCGGATTCCTCTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPAESALY*RIPLRS
Trigger: CGAGCGGAGAGGAATCCGGCAGTAGAGAGCGGACTC...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCGGTTCCGCTGCTCGATaGTCTCTTGGGCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLAGSAAR*SLGRLP
Trigger: GGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACC...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp ACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCTTCGCGGGTTCCGCTaGTCGATGCTCTCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: TAPQAGRAWSAGGSPGPCLRGFR*SMLSWA
Trigger: CGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAG...GCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp AGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTCTTCGCGGGTTCCGCTaGTCGATGCTCTCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: RQDGRGLQEDLQAPAALPLRGFR*SMLSWA
Trigger: CGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAG...AGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGGCTCAGAGCCAGCTCTaGCCAAGACACCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: GATGRTGVVCRRISRPLPAQSQL*PRHPSS
Trigger: TGACGAGGGGTGTCTTGGGCAGAGCTGGCTCTGAGC...CGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCTCAGAGCCAGCTCTaGCCAAGACACCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPAAQSQL*PRHPSS
Trigger: TGACGAGGGGTGTCTTGGGCAGAGCTGGCTCTGAGC...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCGGGCCGTGGTGGCTGTaGTCGTTGAGGCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPGPWWL*SLRPDE
Trigger: CTCATCTGGCCTCAACGACCACAGCCACCACGGCCC...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCAGCAGCCCTCTCGGTaGCAGAAGGACCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GATGRTGVVCRRISRPLPQQPSR*QKDLHP
Trigger: AGGATGGAGGTCCTTCTGCCACCGAGAGGGCTGCTG...CGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTCCTGTGAGGCCCCCGTaGCCCCCTGATCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: WTQARLLERGGGPTAAWTPVRPP*PPDPLG
Trigger: CCCCAGTGGATCAGGGGGCCACGGGGGCCTCACAGG...AGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCCTGCTCCCTGGGTGGTaGGGCCGAGGCGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQALLPGW*GRGAPP
Trigger: AGGGGGTGCGCCTCGGCCCCACCACCCAGGGAGCAG...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS-3UTR TCA 90 bp GGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGTTGGTGGTGCATCTCTaGTCCACAGACTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: GATGRTGVVCRRISRPLPLVVHL*STDWPT
Trigger: GGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAA...CGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp AAGCAGCCCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGACTTCGCGGGTTCCGCTaGTCGATGCTCTCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: KQPLETAPQAGRAWSAGGLRGFR*SMLSWA
Trigger: CGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAG...TCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCCTCCCCAGAGCCCTCTaGTGCTGGGAGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLALPRAL*CWELTG
Trigger: TCCAGTCAGCTCCCAGCAGCAGAGGGCTCTGGGGAG...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp AGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTGGGCAGGAGCGACCAGATGGACTCCTGTCCCCTaGCACTCAGCGGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: SRVELPAHPTTPWAGATRWTPVP*HSAATP
Trigger: GGGGGTGGCCGCTGAGTGGCAGGGGACAGGAGTCCA...TCTGGTCGCTCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCGATGTCCAAGGTGTCTaGGGGGTAGGCCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLADVQGV*GVGLGS
Trigger: GGAGCCGAGGCCTACCCCGCAGACACCTTGGACATC...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCGGGGTTGAGGTCTCATaGTGGCCAGGCTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPGVEVS*WPGCMS
Trigger: GGACATGCAGCCTGGCCACCATGAGACCTCAACCCC...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCTGGGGGCCTAGTGAGTaGCAGGGCGGAGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLWGPSE*QGGGGA
Trigger: TGCGCCCCCTCCGCCCTGCCACTCACTAGGCCCCCA...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTGGGCAGGAGCGACCAGACACCCCACGACTCCGTaGGCAGGAGCGACCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SRVELPAHPTTPWAGATRHPTTP*AGATRG
Trigger: CCCTCTGGTCGCTCCTGCCCACGGAGTCGTGGGGTG...TCTGGTCGCTCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCGGCCCCACGGCAGCCTaGACTGGCCAGCCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLGPTAA*TGQPAN
Trigger: GTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCC...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCCGGAGAACCTGGCCTTaGATGGAGGCGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLARRTWP*MEALRA
Trigger: GGCTCTGAGCGCCTCCATCCAAGGCCAGGTTCTCCG...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp TGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTACAGGCACGACTGCTTaGAAGAGGCGGCGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: WTQARLLERGGGPTAAWTTGTTA*KRRRPH
Trigger: GTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGT...AGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp AGACGTGGGAATAGCCGTCAGGAGCTGCGTGTCCTTCCAAGTGGAGGGGGTCTGGCTCTCTTGGGCGCCTaGCCAGCGCGCCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RRGNSRQELRVLPSGGGLALLGA*PARRCP
Trigger: GGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGC...CAGACCCCCTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCCCACGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR GCA 90 bp ACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCTTAGTAGCCACAATTTaGGGCAGGGCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TAPQAGRAWSAGGSPGPCLVATI*GRAGCR
Trigger: CCTGCAGCCGGCCCTGCCGCAAATTGTGGCTACTAA...GCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGAAGGACGGGCGTGGTCTaGAGGAGGATCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: HGHRHDCLKEAAAPRQPGRTGVV*RRISRP
Trigger: GGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCT...TCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCGCAGGGTCCGCCGGCTaGAGTCCGCTCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQAAGSAG*SPLSTA
Trigger: GGCAGTAGAGAGCGGACTCCAGCCGGCGGACCCTGC...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCGCGTGTCCTTCCAAGTaGAGGGGGTCTGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPACPSK*RGSAVT
Trigger: TGTCACAGCAGACCCCCTCCACTTGGAAGGACACGC...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp AAGCAGCCCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGACAGGCCGGTGGGTTCTaGAGACGTGGGAATAGCCGT +
Preference number: 4 (lower is better)
Translates to: KQPLETAPQAGRAWSAGGQAGGF*RRGNSR
Trigger: ACGGCTATTCCCACGTCTCCAGAACCCACCGGCCTG...TCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp CATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGAGCTCCTGGGCCGTGGTaGCTGTGGTCGTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HGHRHDCLKEAAAPRQPGAPGPW*LWSLRP
Trigger: TGGCCTCAACGACCACAGCCACCACGGCCCAGGAGC...TCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp AGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTATTCCTCCTGTTTGGTaGGCTTCTGGTAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RQDGRGLQEDLQAPAALPIPPVW*ASGRPR
Trigger: GCGGGGCCTACCAGAAGCCCACCAAACAGGAGGAAT...AGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTGTCAGAGAAGCAGAGTaGAGCTCCCAGCACACCCCA +
Preference number: 4 (lower is better)
Translates to: RQDGRGLQEDLQAPAALPVREAE*SSQHTP
Trigger: TGGGGTGTGCTGGGAGCTCCACTCTGCTTCTCTGAC...AGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp ACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCGCCAGGTGCTGGCTGTaGTGGAAAGGTCCTATGCGA +
Preference number: 4 (lower is better)
Translates to: TAPQAGRAWSAGGSPGPCARCWL*WKGPMR
Trigger: TCGCATAGGACCTTTCCACCACAGCCAGCACCTGGC...GCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTCAGAGAAGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTGGGCAGGAGGCCCCACGGCAGCCTaGACTGGCCAGCCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SQRSRVELPAHPTTPWAGGPTAA*TGQPAN
Trigger: GTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCC...TCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCTTCTCTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GAGGGACCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATGTCCAGGAGGCCCTGTaGGGCCCCCGTGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: EGPWNQNPSPWERRRHRDVQEAL*GPRGPL
Trigger: CAGGGGGCCACGGGGGCCTCACAGGGCCTCCTGGAC...ATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGAGAGTCCGCTCTCTACTaGCGGATTCCTCTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: LERGGGPTAAWTGQPANRESALY*RIPLRS
Trigger: CGAGCGGAGAGGAATCCGGCAGTAGAGAGCGGACTC...TCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTTGGCTTGGTGGTaGATCTCTGATCCACAGACT +
Preference number: 4 (lower is better)
Translates to: GATGRTGVVCRRISRPLPPLAWW*ISDPQT
Trigger: AGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGG...CGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCACAAAGTGGACAGGCTaGATGTCCCTGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLATKWTG*MSLWGW
Trigger: CCACCCCCACAGGGACATGCAGCCTGTCCACTTTGT...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403076.5
CDS-3UTR CCA 90 bp GGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGTGCTCGATGCTCTCTTaGGCGCCTGCCCAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: GGASLIHRLAHLSEWPTECSMLS*APAQRA
Trigger: GGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCA...CTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AAGCAGCCCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGAGCGTGTCCTTCCAAGTaGAGGGGGTCTGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: KQPLETAPQAGRAWSAGGACPSK*RGSAVT
Trigger: TGTCACAGCAGACCCCCTCCACTTGGAAGGACACGC...TCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAGCTCCTGGGCCGTGGTaGCTGTGGTCGTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GPGLSMALSAWTQARLLEAPGPW*LWSLRP
Trigger: TGGCCTCAACGACCACAGCCACCACGGCCCAGGAGC...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp TGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTAGAGCCCTCTGCTGCTaGGAGCTGACTGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WTQARLLERGGGPTAAWTRALCC*ELTGGS
Trigger: GGAGCCTCCAGTCAGCTCCCAGCAGCAGAGGGCTCT...AGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGAAGAGCCCTCTGCTGCTaGGAGCTGACTGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HGHRHDCLKEAAAPRQPGRALCC*ELTGGS
Trigger: GGAGCCTCCAGTCAGCTCCCAGCAGCAGAGGGCTCT...TCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTGGGCAGGAGCGACCAGAGGTAGGCCCCGCCGTTaGCTTGTTTCGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SRVELPAHPTTPWAGATRGRPRR*LVSAPP
Trigger: TGGAGGAGCCGAAACAAGCCAACGGCGGGGCCTACC...TCTGGTCGCTCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTCAGAGAAGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTGGGCAGGACACCCCACGACTCCGTaGGCAGGAGCGACCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SQRSRVELPAHPTTPWAGHPTTP*AGATRG
Trigger: CCCTCTGGTCGCTCCTGCCCACGGAGTCGTGGGGTG...TCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCTTCTCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGAGGTGCTGGCTGTGGTaGAAAGGTCCTATGCGAGAA +
Preference number: 4 (lower is better)
Translates to: GATGRTGVVCRRISRPLPRCWLW*KGPMRE
Trigger: TTCTCGCATAGGACCTTTCCACCACAGCCAGCACCT...CGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACAGGCAGGACGGGCGTaGTCTGCAGGAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: HGHRHDCLKEAAAPRQPGQAGRA*SAGGSP
Trigger: TGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTG...TCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp CCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGCAAAGCACCTGCACCTaGGCCGGAGAAGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: PWRRRHRQDGRGLQEDLQQSTCT*AGEVVR
Trigger: TCTGACAACTTCTCCGGCTCAGGTGCAGGTGCTTTG...CTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp ACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCGGAGGGGGTCTGCTGTaGCAAGGTGATATCTTGCAA +
Preference number: 4 (lower is better)
Translates to: TAPQAGRAWSAGGSPGPCGGGLL*QGDILQ
Trigger: TTGCAAGATATCACCTTGTCACAGCAGACCCCCTCC...GCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp GGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAAGAGGCGCCTCAGCATGGCCCTaGGCGCATGGACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLSMALSAWTQARLLERGASAWP*AHGHRH
Trigger: GTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGC...GCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCTTTGGAAAATATTCCTaGTTCCAGCCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPAFGKYS*FQPRAQ
Trigger: CTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAA...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGGGTTCCGCTGCTCGATaGTCTCTTGGGCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ESQHSLLTRASPTWQRPRGSAAR*SLGRLP
Trigger: GGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACC...CCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCCAGAGCCCTCTGCTaGTGGGAGCTGACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESQHSLLTRASPTWQRPRPRALC*WELTGG
Trigger: GCCTCCAGTCAGCTCCCAGCAGCAGAGGGCTCTGGG...CCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAGATGTCCAAGGTGTCTaGGGGGTAGGCCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GPGLSMALSAWTQARLLEDVQGV*GVGLGS
Trigger: GGAGCCGAGGCCTACCCCGCAGACACCTTGGACATC...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCGCCTCTGCAGCCGGGTaGGAGGAGGATGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLASAAG*EEDVQG
Trigger: ACCTTGGACATCCTCCTCCCACCCGGCTGCAGAGGC...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAGTCGTTGAGGCCAGATaGGTGGTCGGGAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GPGLSMALSAWTQARLLEVVEAR*VVGSCV
Trigger: CACACAGCTCCCGACCACTCATCTGGCCTCAACGAC...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp GAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCACCCTGTTGCACACATaGGCGACAAACTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: ETAPQAGRAWSAGGSPGPTLLHT*ATNSRD
Trigger: GTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGT...GGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCGAGTCCGCTCTCTACTaGCGGATTCCTCTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQAESALY*RIPLRS
Trigger: CGAGCGGAGAGGAATCCGGCAGTAGAGAGCGGACTC...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGAATAGCCGTCAGGAGCTaGGTGTCCTTCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LERGGGPTAAWTGQPANRIAVRS*VSFQVE
Trigger: CTCCACTTGGAAGGACACGCAGCTCCTGACGGCTAT...TCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp AGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTGGGCAGGAGCGACCAGAGTCAGAATGGTGCGATaGCAGGTGCTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SRVELPAHPTTPWAGATRVRMVR*QVLAVV
Trigger: CACCACAGCCAGCACCTGGCATCGCACCATTCTGAC...TCTGGTCGCTCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGGGACACAGGCACGACTaGTTGAAAGAGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ESQHSLLTRASPTWQRPRGHRHD*LKEAAA
Trigger: GGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCC...CCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACAGAAGGTCAGCTTGGCTaGGTCCTGCAGGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTEGQLG*VLQGLR
Trigger: CCTCAACCCCTGCAGGACCCAGCCAAGCTGACCTTC...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCCTGCTGGGAGCTGACTaGAGGCTCCATCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLLLGAD*RLHPQQ
Trigger: CTGCTGAGGATGGAGCCTCCAGTCAGCTCCCAGCAG...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATTCGAGCGCAGGAGCCCTGGGCTaGGGGCCTCTGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PWNQNPSPWERRRHRDSSAGALG*GPLASA
Trigger: TGCAGAGGCCAGAGGCCCCCAGCCCAGGGCTCCTGC...GCTCGAATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCGCCCACCTCTCGGAGTaGCCAACGGAGTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQAAHLSE*PTESLK
Trigger: TTTCAGCGACTCCGTTGGCCACTCCGAGAGGTGGGC...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGCCTGCTCCCGGGCGGTaGGGCCAGGCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: EAASVWRNRVRMVRCQVLPAPGR*GQAPLL
Trigger: CAGAAGTGGAGCCTGGCCTCACCGCCCGGGAGCAGG...CAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp CCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGATCTTCCAGCCACATaGGGCCATTTAGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PWRRRHRQDGRGLQEDLQDLPAT*GHLGPK
Trigger: CTTTGGACCTAAATGGCCTCATGTGGCTGGAAGATC...CTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp CCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGTTTGGAAAATATTCCTaGTTCCAGCCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PWRRRHRQDGRGLQEDLQFGKYS*FQPRAQ
Trigger: CTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAA...CTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp GGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAAGAGGCTCCACACCTCCGCTGTaGCCACAGCCTCAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GLSMALSAWTQARLLERGSTPPL*PQPQVK
Trigger: CTTGACCTGAGGCTGTGGTCACAGCGGAGGTGTGGA...GCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCCAAGTGGAGGGGGTCTaGTGTGACAAGGTGATATCT +
Preference number: 4 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLAQVEGV*CDKVIS
Trigger: AGATATCACCTTGTCACAGCAGACCCCCTCCACTTG...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCCCTCCAAGGAGTAGCTaGCTTCGTCCTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLAPPRSS*LRPSSS
Trigger: TGAAGAAGAAGGACGAAGGCAGCTACTCCTTGGAGG...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAATGGTGCGATGCCAGGTaGTGGCTGTGGTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: GPGLSMALSAWTQARLLEWCDAR*WLWWKG
Trigger: ACCTTTCCACCACAGCCAGCACCTGGCATCGCACCA...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAACCGAGTCAGAATGGTaGGATGCCAGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPGLSMALSAWTQARLLETESEW*DARCWL
Trigger: CAGCCAGCACCTGGCATCGCACCATTCTGACTCGGT...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCACACATGGGGGCCTCTGGCCTCTaGAGCCGGGTGGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: DHQKRGHQTDSPYPVAHMGASGL*SRVGGG
Trigger: TCCTCCTCCCACCCGGCTGCAGAGGCCAGAGGCCCC...CATGTGTGCAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCAGGCCGGTGGGTTCTaGAGACGTGGGAATAGCCGT +
Preference number: 4 (lower is better)
Translates to: ESQHSLLTRASPTWQRPRQAGGF*RRGNSR
Trigger: ACGGCTATTCCCACGTCTCCAGAACCCACCGGCCTG...CCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp TGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTCCAGGGCCCCCTGATCCACTaGGGACTGGTTCCGGCGGTC +
Preference number: 4 (lower is better)
Translates to: WLWWKGPMRETPGALSLQGPLIH*GLVPAV
Trigger: GACCGCCGGAACCAGTCCCCAGTGGATCAGGGGGCC...CTGGAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCATTAGGGAAGCAAGATaGGGGGATACCGAATCAACT +
Preference number: 4 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPAIREAR*GDTEST
Trigger: AGTTGATTCGGTATCCCCCCATCTTGCTTCCCTAAT...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp CTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGGCCCCACGGCAGCCTaGACTGGCCAGCCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LPTDHQKRGHQTDSPYPVGPTAA*TGQPAN
Trigger: GTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCC...AACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAATGGCCCTGAGCGCATaGACACAGGCACGACTGCTT +
Preference number: 4 (lower is better)
Translates to: GPGLSMALSAWTQARLLEMALSA*TQARLL
Trigger: AAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCAT...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp TGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTCCAGCGGGCTTCTCCAACGTaGCAGCGGCCCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: WLWWKGPMRETPGALSLQRASPT*QRPRPQ
Trigger: CTGAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCG...CTGGAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GAGGGACCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATCGGGCTTCTCCAACGTaGCAGCGGCCCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EGPWNQNPSPWERRRHRDRASPT*QRPRPQ
Trigger: CTGAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCG...ATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp CATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGAGGAGGGGGTCTGCTGTaGCAAGGTGATATCTTGCAA +
Preference number: 4 (lower is better)
Translates to: HGHRHDCLKEAAAPRQPGGGGLL*QGDILQ
Trigger: TTGCAAGATATCACCTTGTCACAGCAGACCCCCTCC...TCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp CCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATTCGAGCGCCTCAGCATGGCCCTaGGCGCATGGACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: PWNQNPSPWERRRHRDSSASAWP*AHGHRH
Trigger: GTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGC...GCTCGAATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp CTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGATCTCTGTCTGAAGGCTaGGTCCCAGCATTCACTTCT +
Preference number: 4 (lower is better)
Translates to: LERGGGPTAAWTGQPANRSLSEG*VPAFTS
Trigger: AGAAGTGAATGCTGGGACTCAGCCTTCAGACAGAGA...TCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp CATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGAACAGTCCTCTCTGTCTaGAGGCTGAGTCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: HGHRHDCLKEAAAPRQPGTVLSV*RLSPSI
Trigger: AATGCTGGGACTCAGCCTTCAGACAGAGAGGACTGT...TCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp TCTGGAGACGTGGGAATAGCCGTCAGGAGCTGCGTGTCCTTCCAAGTGGAGGGGGAGTCCGCTCTCTACTaGCGGATTCCTCTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: SGDVGIAVRSCVSFQVEGESALY*RIPLRS
Trigger: CGAGCGGAGAGGAATCCGGCAGTAGAGAGCGGACTC...CCCCTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCCCACGTCTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR GCA 90 bp AAGCAGCCCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGAGACAAGGTGATATCTTaGAAAGCACCTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: KQPLETAPQAGRAWSAGGDKVIS*KAPAPE
Trigger: CTCAGGTGCAGGTGCTTTGCAAGATATCACCTTGTC...TCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCATAGCCGTCAGGAGCTaGGTGTCCTTCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQAIAVRS*VSFQVE
Trigger: CTCCACTTGGAAGGACACGCAGCTCCTGACGGCTAT...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp TGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTCCAGCCCAGAGCCCTCTGCTaGTGGGAGCTGACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: WLWWKGPMRETPGALSLQPRALC*WELTGG
Trigger: GCCTCCAGTCAGCTCCCAGCAGCAGAGGGCTCTGGG...CTGGAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAATCAAAGGTGAAGTCCTaGTCCCCAGAGCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPGLSMALSAWTQARLLESKVKS*SPEPSA
Trigger: AGCAGAGGGCTCTGGGGAGCAGGACTTCACCTTTGA...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGGGTGGAAAGGTCCTATaGGAGAAACCCCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GGASLIHRLAHLSEWPTEGGKVL*EKPLVP
Trigger: GGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACC...CTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCCACCCCCGAGTCATGTaGAGTCATACACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLHPRVM*SHTLQA
Trigger: TGCCTGGAGTGTATGACTGCACATGACTCGGGGGTG...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGGCGTGTCCTTCCAAGTaGAGGGGGTCTGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: GGASLIHRLAHLSEWPTEACPSK*RGSAVT
Trigger: TGTCACAGCAGACCCCCTCCACTTGGAAGGACACGC...CTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGTCTGAAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCGGGCTCCTGGGCCGTaGTGGCTGTGGTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CLKAESQHSLLTRASPTWRAPGP*WLWSLR
Trigger: CCTCAACGACCACAGCCACCACGGCCCAGGAGCCCG...CCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTCAGCCTTCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGATTCCTCCTGTTTGGTaGGCTTCTGGTAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: ESQHSLLTRASPTWQRPRIPPVW*ASGRPR
Trigger: GCGGGGCCTACCAGAAGCCCACCAAACAGGAGGAAT...CCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAAGAGGCCAAGGAAGAGGCAAGTaGGGGCCTAGTGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLSMALSAWTQARLLERGQGRGK*GPSEWQ
Trigger: CTGCCACTCACTAGGCCCCCACTTGCCTCTTCCTTG...GCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACATACACAGAGGGACCCTaGAACCAGAATCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTYTEGP*NQNPSP
Trigger: TGGGGAGGGATTCTGGTTCCAGGGTCCCTCTGTGTA...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTTATAAAACCTTaGCTGAACCTACCGACCTCC +
Preference number: 4 (lower is better)
Translates to: HRHDCLKEAAAPRQPGLASLIKP*LNLPTS
Trigger: GGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCT...GGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGTTGCCATTTAGAAGATaGGGCTTGGAGCTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: PWRRRHRQDGRGLQEDLQLPFRR*GLELGN
Trigger: GTTGCCAAGCTCCAAGCCCCATCTTCTAAATGGCAA...CTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCCACCCCCGAGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCCGCTTTCGGGAGCTGTaGTCCCCGCAAGCCGCGGTT +
Preference number: 4 (lower is better)
Translates to: PHPRVMCSHTLQAESRSIRFREL*SPQAAV
Trigger: AACCGCGGCTTGCGGGGACCACAGCTCCCGAAAGCG...GATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACTCGGGGGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS-3UTR TCA 90 bp TGTCTGAAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGGGCACACAGCAAAGATaGGCCCCACGAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: CLKAESQHSLLTRASPTWGTQQR*APRGLR
Trigger: CCGGAGGCCTCGTGGGGCTCATCTTTGCTGTGTGCC...CCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTCAGCCTTCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCACACATGAGTGCTACAGGTGTGTaGGCCCCAAGCCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: DHQKRGHQTDSPYPVAHMSATGV*APSPTR
Trigger: GCGGGTGGGGCTTGGGGCTCACACACCTGTAGCACT...CATGTGTGCAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp CATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGATTGTCGTTACACAAATaGACCCAGCCTCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HGHRHDCLKEAAAPRQPGLSLHK*TQPLAW
Trigger: CCAAGCCAGAGGCTGGGTTCATTTGTGTAACGACAA...TCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp AAGACTATCACTCTTTGGAAAATATTCCTGATTCCAGCCCAGGGCCCAGGGTGGGCTCTCTTGGGCGCCTaGCCAGCGCGCCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KTITLWKIFLIPAQGPGWALLGA*PARRCP
Trigger: GGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGC...CCACCCTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAAGAGTGATAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGAGACAAGGTGATATCTTaGAAAGCACCTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: LERGGGPTAAWTGQPANRDKVIS*KAPAPE
Trigger: CTCAGGTGCAGGTGCTTTGCAAGATATCACCTTGTC...TCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp ATCTTCAGGGGGCAAATTAGTAGCCACAATTTGCTGGGAAGCAGGGAGGGCGCTGCAGGGTCCGCCGGCTaGAGTCCGCTCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: IFRGQISSHNLLGSREGAAGSAG*SPLSTA
Trigger: GGCAGTAGAGAGCGGACTCCAGCCGGCGGACCCTGC...AGCGCCCTCCCTGCTTCCCAGCAAATTGTGGCTACTAATTTGCCCCCTGAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR CCA 90 bp TGGAGACGTGGGAATAGCCGTCAGGAGCTGCGTGTCCTTCCAAGTGGAGGGGGTGCGTGTCCTTCCAAGTaGAGGGGGTCTGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: WRRGNSRQELRVLPSGGGACPSK*RGSAVT
Trigger: TGTCACAGCAGACCCCCTCCACTTGGAAGGACACGC...ACCCCCTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCCCACGTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR CCA 90 bp GAGGGACCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATGGGCCGTGGTGGCTGTaGTCGTTGAGGCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: EGPWNQNPSPWERRRHRDGPWWL*SLRPDE
Trigger: CTCATCTGGCCTCAACGACCACAGCCACCACGGCCC...ATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACAAGAATTCCTCCTGTTTaGTGGGCTTCTGGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTRIPPV*WASGRP
Trigger: GGGCCTACCAGAAGCCCACCAAACAGGAGGAATTCT...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGCACGGCAGCCTGGACTaGCCAGCCTGCCAACAGACC +
Preference number: 4 (lower is better)
Translates to: EAASVWRNRVRMVRCQVLHGSLD*PACQQT
Trigger: GGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTG...CAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTCCAGCAGGCAGGACGGGCGTaGTCTGCAGGAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: WLWWKGPMRETPGALSLQQAGRA*SAGGSP
Trigger: TGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTG...CTGGAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTCAGAGAAGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTGGGCAGGATACACAGAGGGACCCTaGAACCAGAATCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SQRSRVELPAHPTTPWAGYTEGP*NQNPSP
Trigger: TGGGGAGGGATTCTGGTTCCAGGGTCCCTCTGTGTA...TCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCTTCTCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGTCTGAAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGACCCAGCCTCTGGCTTaGGCACCGTCCCACGGACCA +
Preference number: 4 (lower is better)
Translates to: CLKAESQHSLLTRASPTWTQPLA*APSHGP
Trigger: TGGTCCGTGGGACGGTGCCCAAGCCAGAGGCTGGGT...CCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTCAGCCTTCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCACCCTGTTGCACACATaGGCGACAAACTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQATLLHT*ATNSRD
Trigger: GTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGT...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTTGTCGTTACACAAATaGACCCAGCCTCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQALSLHK*TQPLAW
Trigger: CCAAGCCAGAGGCTGGGTTCATTTGTGTAACGACAA...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CACCTGAGCCGGAGAAGTTGTCAGAGTCATCCCCAGAGCCATCTTGATCTTCAGGGTTCCGCTGCTCGATaGTCTCTTGGGCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HLSRRSCQSHPQSHLDLQGSAAR*SLGRLP
Trigger: GGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACC...CTGAAGATCAAGATGGCTCTGGGGATGACTCTGACAACTTCTCCGGCTCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR GCA 90 bp GAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGGGACACAGGCACGACTaGTTGAAAGAGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EAASVWRNRVRMVRCQVLGHRHD*LKEAAA
Trigger: GGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCC...CAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GAGGGACCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATCCTCAGGTCAAGCTGTaGTGGGGCCATCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: EGPWNQNPSPWERRRHRDPQVKL*WGHPPS
Trigger: GGAAGGTGGATGGCCCCAGCACAGCTTGACCTGAGG...ATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CCCCACCCCCGAGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCCCTCAGGTCAAGCTGTaGTGGGGCCATCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: PHPRVMCSHTLQAESRSIPQVKL*WGHPPS
Trigger: GGAAGGTGGATGGCCCCAGCACAGCTTGACCTGAGG...GATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACTCGGGGGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAAAGGCGCACCCCCTTCTaGCCGGGCCCGGAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAERRTPF*PGPECG
Trigger: TCCGCACTCCGGGCCCGGGCAGAAGGGGGTGCGCCT...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS-3UTR GCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGGCCTTTCAGCTCGGCTaGTCCCTGGGTGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKAFQLG*SLGGGA
Trigger: GGCCCCACCACCCAGGGAGCAGCCGAGCTGAAAGGC...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACTGGGGGCCTAGTGAGTaGCAGGGCGGAGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SHVQSYTPGRKSQYRIPDWGPSE*QGGGGA
Trigger: TGCGCCCCCTCCGCCCTGCCACTCACTAGGCCCCCA...GTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGCGGAGAACCTGGCCTTaGATGGAGGCGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: EAASVWRNRVRMVRCQVLRRTWP*MEALRA
Trigger: GGCTCTGAGCGCCTCCATCCAAGGCCAGGTTCTCCG...CAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCCTCTGCAGCCGGGTaGGAGGAGGATGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LPTDHQKRGHQTDSPYPVASAAG*EEDVQG
Trigger: ACCTTGGACATCCTCCTCCCACCCGGCTGCAGAGGC...AACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCCACCCCCGAGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCAATGAACCCAGCCTCTaGCTTGGGCACCGTCCCACG +
Preference number: 4 (lower is better)
Translates to: PHPRVMCSHTLQAESRSINEPSL*LGHRPT
Trigger: CGTGGGACGGTGCCCAAGCCAGAGGCTGGGTTCATT...GATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACTCGGGGGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGTCTCTGTCTGAAGGCTaGGTCCCAGCATTCACTTCT +
Preference number: 4 (lower is better)
Translates to: GGASLIHRLAHLSEWPTESLSEG*VPAFTS
Trigger: AGAAGTGAATGCTGGGACTCAGCCTTCAGACAGAGA...CTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAACCATCCACCTTCCTTTaGCATTTAGAAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: GPGLSMALSAWTQARLLEPSTFL*HLEDGA
Trigger: AGCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGG...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCCCATCCACCTTCCTTTaGCATTTAGAAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQAPSTFL*HLEDGA
Trigger: AGCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGG...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GATAGTCCATACCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACACCGCCGAGCTCCGCCTaGTTGGCTCCCGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: DSPYPVAHMSDKLKRQHTPPSSA*LAPAPP
Trigger: CGGAGGAGCGGGAGCCAAGCAGGCGGAGCTCGGCGG...TGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGTATGGACTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS-3UTR CCA 90 bp TGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGGCCAGGCTCCACTTCTaGCAGGACTACAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: CQQTTRNGATRQIVHTLLARLHF*QDYSLS
Trigger: GGAGAGGCTGTAGTCCTGCCAGAAGTGGAGCCTGGC...CAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp TGTCTGAAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGGGGGTTGAGGTCTCATaGTGGCCAGGCTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: CLKAESQHSLLTRASPTWGVEVS*WPGCMS
Trigger: GGACATGCAGCCTGGCCACCATGAGACCTCAACCCC...CCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTCAGCCTTCAGACA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCAGCAGCCCTCTCGGTaGCAGAAGGACCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: CQQTTRNGATRQIVHTLLQQPSR*QKDLHP
Trigger: AGGATGGAGGTCCTTCTGCCACCGAGAGGGCTGCTG...CAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGTCTGAAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCTGCTGGGAGCTGACTaGAGGCTCCATCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLKAESQHSLLTRASPTWLLGAD*RLHPQQ
Trigger: CTGCTGAGGATGGAGCCTCCAGTCAGCTCCCAGCAG...CCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTCAGCCTTCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACGGCCCCCTGATCCACTaGGGACTGGTTCCGGCGGTC +
Preference number: 4 (lower is better)
Translates to: SHVQSYTPGRKSQYRIPDGPLIH*GLVPAV
Trigger: GACCGCCGGAACCAGTCCCCAGTGGATCAGGGGGCC...GTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATTCGAGCTGCGATGCCAGGTGCTaGCTGTGGTGGAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PWNQNPSPWERRRHRDSSCDARC*LWWKGP
Trigger: AGGACCTTTCCACCACAGCCAGCACCTGGCATCGCA...GCTCGAATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACAGAGGCTGCTTCAGTTTaGAGAAACCGAGTCAGAATG +
Preference number: 4 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTEAASV*RNRVRM
Trigger: CATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GAGGGACCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATCCCCACGAAACAAAGTaGACTCCTGTCCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: EGPWNQNPSPWERRRHRDPHETK*TPVPCH
Trigger: GTGGCAGGGGACAGGAGTCCACTTTGTTTCGTGGGG...ATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp CCCCACCCCCGAGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCTCATGCGGTACAGCATaGAACCCACCAGGCACACAG +
Preference number: 4 (lower is better)
Translates to: PHPRVMCSHTLQAESRSISCGTA*NPPGTQ
Trigger: CTGTGTGCCTGGTGGGTTTCATGCTGTACCGCATGA...GATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACTCGGGGGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp AAGACTATCACTCTTTGGAAAATATTCCTGATTCCAGCCCAGGGCCCAGGGTGGGCCTCAGCATGGCCCTaGGCGCATGGACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: KTITLWKIFLIPAQGPGWASAWP*AHGHRH
Trigger: GTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGC...CCACCCTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAAGAGTGATAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GTCAGAGTCATCCCCAGAGCCATCTTGATCTTCAGGGGGCAAATTAGTAGCCACCTTCGCGGGTTCCGCTaGTCGATGCTCTCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: VRVIPRAILIFRGQISSHLRGFR*SMLSWA
Trigger: CGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAG...GTGGCTACTAATTTGCCCCCTGAAGATCAAGATGGCTCTGGGGATGACTCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR GCA 90 bp CTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTTGGTGCGATGCCAGGTaGTGGCTGTGGTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LPTDHQKRGHQTDSPYPVWCDAR*WLWWKG
Trigger: ACCTTTCCACCACAGCCAGCACCTGGCATCGCACCA...AACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGGTCAGAATGGTGCGATaGCAGGTGCTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: EAASVWRNRVRMVRCQVLVRMVR*QVLAVV
Trigger: CACCACAGCCAGCACCTGGCATCGCACCATTCTGAC...CAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATTCGAGCGACCTGGGGAGAGGCTaGTTCAGTTTGGAGAAACCG +
Preference number: 4 (lower is better)
Translates to: PWNQNPSPWERRRHRDSSDLGRG*FSLEKP
Trigger: CGGTTTCTCCAAACTGAAGCAGCCTCTCCCCAGGTC...GCTCGAATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCACACATGCTGGACTGGCCAGCCTaGCAACAGACCACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: DHQKRGHQTDSPYPVAHMLDWPA*QQTTRN
Trigger: GTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAG...CATGTGTGCAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTCTGGACTGGCCAGCCTaGCAACAGACCACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LPTDHQKRGHQTDSPYPVLDWPA*QQTTRN
Trigger: GTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAG...AACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp CAATTTGCTGGGAAGCAGGGAGGGCGCTTTACACATCGGTCTCAGAAACGACTGCAGGCCGGTGGGTTCTaGAGACGTGGGAATAGCCGT +
Preference number: 4 (lower is better)
Translates to: QFAGKQGGRFTHRSQKRLQAGGF*RRGNSR
Trigger: ACGGCTATTCCCACGTCTCCAGAACCCACCGGCCTG...CAGTCGTTTCTGAGACCGATGTGTAAAGCGCCCTCCCTGCTTCCCAGCAAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR CCA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAATTAGGGAAGCAAGATaGGGGGATACCGAATCAACT +
Preference number: 4 (lower is better)
Translates to: GPGLSMALSAWTQARLLEIREAR*GDTEST
Trigger: AGTTGATTCGGTATCCCCCCATCTTGCTTCCCTAAT...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCAAGAAGCGAAGGCAGTaGCATTCACAGGACTACTTT +
Preference number: 4 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLKKRRQ*HSQDYF
Trigger: AAAGTAGTCCTGTGAATGCCACTGCCTTCGCTTCTT...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTCCAGGGACACAGGTTCCCTTaGCTTGGTGGTGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: WLWWKGPMRETPGALSLQGHRFP*LGGASL
Trigger: CAGAGATGCACCACCAAGCCAAGGGAACCTGTGTCC...CTGGAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CAA 72 bp CCACCTCTCGGAGTGGCCAACGGAGTCGCTGAAACGTaGTCAAATAAGCAAGTAAGTGCAGGAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPLGVANGVAET*SNKQVSAGALG
Trigger: GCCCAGGGCTCCTGCACTTACTTGCTTATTTGACAACGTTTCAGCGACTCCGTTGGCCACTCCGAGAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTCCTGCTCCCGGGCGGTaGGGCCAGGCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: IDISLIKPWLNLPTSRRIPAPGR*GQAPLL
Trigger: CAGAAGTGGAGCCTGGCCTCACCGCCCGGGAGCAGG...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp TGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTCCAGACAGTCCTCTCTGTCTaGAGGCTGAGTCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: WLWWKGPMRETPGALSLQTVLSV*RLSPSI
Trigger: AATGCTGGGACTCAGCCTTCAGACAGAGAGGACTGT...CTGGAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTATAGCCGTCAGGAGCTaGGTGTCCTTCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPTDHQKRGHQTDSPYPVIAVRS*VSFQVE
Trigger: CTCCACTTGGAAGGACACGCAGCTCCTGACGGCTAT...AACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp TGTCTGAAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGGACCTGGGGAGAGGCTaGTTCAGTTTGGAGAAACCG +
Preference number: 4 (lower is better)
Translates to: CLKAESQHSLLTRASPTWDLGRG*FSLEKP
Trigger: CGGTTTCTCCAAACTGAAGCAGCCTCTCCCCAGGTC...CCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTCAGCCTTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGTGGACTCCTGTCCCCTaGCACTCAGCGGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: WGLELGNTEIDISLIKPWWTPVP*HSAATP
Trigger: GGGGGTGGCCGCTGAGTGGCAGGGGACAGGAGTCCA...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp TGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTCCAGCCCTTGGCTTGGTGGTaGATCTCTGATCCACAGACT +
Preference number: 4 (lower is better)
Translates to: WLWWKGPMRETPGALSLQPLAWW*ISDPQT
Trigger: AGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGG...CTGGAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GATAGTCCATACCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAGCAGGGTCCGCCGGCTaGAGTCCGCTCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: DSPYPVAHMSDKLKRQHTAGSAG*SPLSTA
Trigger: GGCAGTAGAGAGCGGACTCCAGCCGGCGGACCCTGC...TGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGTATGGACTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGCAGGCCGGTGGGTTCTaGAGACGTGGGAATAGCCGT +
Preference number: 4 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKQAGGF*RRGNSR
Trigger: ACGGCTATTCCCACGTCTCCAGAACCCACCGGCCTG...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AAGACTATCACTCTTTGGAAAATATTCCTGATTCCAGCCCAGGGCCCAGGGTGGGGGCCGTGGTGGCTGTaGTCGTTGAGGCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: KTITLWKIFLIPAQGPGWGPWWL*SLRPDE
Trigger: CTCATCTGGCCTCAACGACCACAGCCACCACGGCCC...CCACCCTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAAGAGTGATAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGCGGGCTCCTGGGCCGTaGTGGCTGTGGTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WGLELGNTEIDISLIKPWRAPGP*WLWSLR
Trigger: CCTCAACGACCACAGCCACCACGGCCCAGGAGCCCG...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AAGACTATCACTCTTTGGAAAATATTCCTGATTCCAGCCCAGGGCCCAGGGTGGCGGAGAACCTGGCCTTaGATGGAGGCGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KTITLWKIFLIPAQGPGWRRTWP*MEALRA
Trigger: GGCTCTGAGCGCCTCCATCCAAGGCCAGGTTCTCCG...CCACCCTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAAGAGTGATAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGCAGGTCAAGCTGTGCTaGGGCCATCCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EAASVWRNRVRMVRCQVLQVKLC*GHPPSF
Trigger: AAAGGAAGGTGGATGGCCCCAGCACAGCTTGACCTG...CAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CAA 72 bp CTCAGGTCAAGCTGTGCTGGGGCCATCCACCTTCCTTaGCCATTTAGAAGATGGGGCTTGGAGCTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LRSSCAGAIHLP*PFRRWGLELGN
Trigger: GTTGCCAAGCTCCAAGCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGGCCCCAGCACAGCTTGACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGGGTGGCTGTGGTCGTTaGGGCCAGATGAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: GKTKAQRFEPSFPTCWCLGGCGR*GQMSGR
Trigger: CCGACCACTCATCTGGCCTCAACGACCACAGCCACC...CAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp CATGTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGCCGAGGTTTCAAAGGTaGAGTCCTGCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: HVGVCRKVRSRHTQHRGKPRFQR*SPAPQS
Trigger: GCTCTGGGGAGCAGGACTTCACCTTTGAAACCTCGG...CTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp TGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTCCAGACCCTGTTGCACACATaGGCGACAAACTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: WLWWKGPMRETPGALSLQTLLHT*ATNSRD
Trigger: GTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGT...CTGGAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GCCATCTTGATCTTCAGGGGGCAAATTAGTAGCCACAATTTGCTGGGAAGCAGGCTACCTCATCTCCCATaGGACAGACTCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AILIFRGQISSHNLLGSRLPHLP*DRLGRA
Trigger: GGCCCTGCCGAGTCTGTCTCATGGGAGATGAGGTAG...CCTGCTTCCCAGCAAATTGTGGCTACTAATTTGCCCCCTGAAGATCAAGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR GCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGTTAGTAGCCACAATTTaGGGCAGGGCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKLVATI*GRAGCR
Trigger: CCTGCAGCCGGCCCTGCCGCAAATTGTGGCTACTAA...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CTGGGAAGCAGGGAGGGCGCTTTACACATCGGTCTCAGAAACGACTGTCCCTACCAAGTGGAGGGGGTCTaGTGTGACAAGGTGATATCT +
Preference number: 4 (lower is better)
Translates to: LGSREGALHIGLRNDCPYQVEGV*CDKVIS
Trigger: AGATATCACCTTGTCACAGCAGACCCCCTCCACTTG...GTAGGGACAGTCGTTTCTGAGACCGATGTGTAAAGCGCCCTCCCTGCTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR GCA 90 bp GGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCTCCCCAGAGCCCTCTaGTGCTGGGAGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: GKTKAQRFEPSFPTCWCLLPRAL*CWELTG
Trigger: TCCAGTCAGCTCCCAGCAGCAGAGGGCTCTGGGGAG...CAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGTGCGATGCCAGGTGCTaGCTGTGGTGGAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKCDARC*LWWKGP
Trigger: AGGACCTTTCCACCACAGCCAGCACCTGGCATCGCA...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGCTCCAGAGCTGGACCTaGGGAGAGGCTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKLQSWT*GEAASV
Trigger: AACTGAAGCAGCCTCTCCCCAGGTCCAGCTCTGGAG...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GATAGTCCATACCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACACCTCCCCTCCAGAGCTaGACCTGGGGAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DSPYPVAHMSDKLKRQHTPPLQS*TWGEAA
Trigger: AGCAGCCTCTCCCCAGGTCCAGCTCTGGAGGGGAGG...TGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGTATGGACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACACGGCAGCCTGGACTaGCCAGCCTGCCAACAGACC +
Preference number: 4 (lower is better)
Translates to: PCCTHERQTQETTHKLSLHGSLD*PACQQT
Trigger: GGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTG...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGCGGGCTTCTCCAACGTaGCAGCGGCCCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQRASPT*QRPRPQ
Trigger: CTGAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCG...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp TGTCTGAAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGAATCCCTCCCCATaGGAAAGACGAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: CLKAESQHSLLTRASPTWQNPSP*ERRRHR
Trigger: TCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTG...CCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTCAGCCTTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCAGAATCCCTCCCCATaGGAAAGACGAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: CQQTTRNGATRQIVHTLLQNPSP*ERRRHR
Trigger: TCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTG...CAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGCCACAATTTGCTGGGAAGCAGGGAGGGCGCTTTACACATCGGTCTCAGAAACGTAGCCACAATTTGCTaGGAAGCAGGGAGGGCGCTT +
Preference number: 4 (lower is better)
Translates to: SHNLLGSREGALHIGLRNVATIC*EAGRAL
Trigger: AAGCGCCCTCCCTGCTTCCCAGCAAATTGTGGCTAC...GTTTCTGAGACCGATGTGTAAAGCGCCCTCCCTGCTTCCCAGCAAATTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR TCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGCAAAGCACCTGCACCTaGGCCGGAGAAGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKQSTCT*AGEVVR
Trigger: TCTGACAACTTCTCCGGCTCAGGTGCAGGTGCTTTG...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAAGTCGTTGAGGCCAGATaGGTGGTCGGGAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAEVVEAR*VVGSCV
Trigger: CACACAGCTCCCGACCACTCATCTGGCCTCAACGAC...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTCCACGGACCAGCAGATaGGCATGGTCAGCCGACCCC +
Preference number: 4 (lower is better)
Translates to: IDISLIKPWLNLPTSRRIPRTSR*AWSADP
Trigger: GGGGTCGGCTGACCATGCTCATCTGCTGGTCCGTGG...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CTGGGAAGCAGGGAGGGCGCTTTACACATCGGTCTCAGAAACGACTGTCCCTACGACAAGGTGATATCTTaGAAAGCACCTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: LGSREGALHIGLRNDCPYDKVIS*KAPAPE
Trigger: CTCAGGTGCAGGTGCTTTGCAAGATATCACCTTGTC...GTAGGGACAGTCGTTTCTGAGACCGATGTGTAAAGCGCCCTCCCTGCTTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR GCA 90 bp TGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCAAGTGGAGGGGGTCTaGTGTGACAAGGTGATATCT +
Preference number: 4 (lower is better)
Translates to: CQQTTRNGATRQIVHTLLQVEGV*CDKVIS
Trigger: AGATATCACCTTGTCACAGCAGACCCCCTCCACTTG...CAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CGGAGAAGTTGTCAGAGTCATCCCCAGAGCCATCTTGATCTTCAGGGGGCAAATATAGCCGTCAGGAGCTaGGTGTCCTTCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RRSCQSHPQSHLDLQGANIAVRS*VSFQVE
Trigger: CTCCACTTGGAAGGACACGCAGCTCCTGACGGCTAT...ATTTGCCCCCTGAAGATCAAGATGGCTCTGGGGATGACTCTGACAACTTCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR GCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGTCAAAGGTGAAGTCCTaGTCCCCAGAGCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKSKVKS*SPEPSA
Trigger: AGCAGAGGGCTCTGGGGAGCAGGACTTCACCTTTGA...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAAGGGGAGGCCAGGGCCTaGAGTTCTTCAAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAEGEARA*SSSRKR
Trigger: CCTCTTCCTTGAAGAACTGCAGGCCCTGGCCTCCCC...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp AAGACTATCACTCTTTGGAAAATATTCCTGATTCCAGCCCAGGGCCCAGGGTGGGGTGGAAAGGTCCTATaGGAGAAACCCCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KTITLWKIFLIPAQGPGWGGKVL*EKPLVP
Trigger: GGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACC...CCACCCTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAAGAGTGATAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTAGGACGGGCGTGGTCTaGAGGAGGATCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IDISLIKPWLNLPTSRRIRTGVV*RRISRP
Trigger: GGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCT...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGGAAGGTCAGCTTGGCTaGGTCCTGCAGGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GKTKAQRFEPSFPTCWCLEGQLG*VLQGLR
Trigger: CCTCAACCCCTGCAGGACCCAGCCAAGCTGACCTTC...CAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CATGTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGGAAACCGAGTCAGAATaGTGCGATGCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HVGVCRKVRSRHTQHRGKETESE*CDARCW
Trigger: CCAGCACCTGGCATCGCACCATTCTGACTCGGTTTC...CTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTCCTCCCCTCCAGAGCTaGACCTGGGGAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IDISLIKPWLNLPTSRRIPPLQS*TWGEAA
Trigger: AGCAGCCTCTCCCCAGGTCCAGCTCTGGAGGGGAGG...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACAGGCAGGACGGGCGTaGTCTGCAGGAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PCCTHERQTQETTHKLSLQAGRA*SAGGSP
Trigger: TGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTG...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTAGTCGTTGAGGCCAGATaGGTGGTCGGGAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PCCTHERQTQETTHKLSLVVEAR*VVGSCV
Trigger: CACACAGCTCCCGACCACTCATCTGGCCTCAACGAC...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp AGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACTCATGCGGTACAGCATaGAACCCACCAGGCACACAG +
Preference number: 4 (lower is better)
Translates to: SHVQSYTPGRKSQYRIPDSCGTA*NPPGTQ
Trigger: CTGTGTGCCTGGTGGGTTTCATGCTGTACCGCATGA...GTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGTCCACACCTCCGCTGTaGCCACAGCCTCAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: WGLELGNTEIDISLIKPWSTPPL*PQPQVK
Trigger: CTTGACCTGAGGCTGTGGTCACAGCGGAGGTGTGGA...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp TGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGGACAAGGTGATATCTTaGAAAGCACCTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: CQQTTRNGATRQIVHTLLDKVIS*KAPAPE
Trigger: CTCAGGTGCAGGTGCTTTGCAAGATATCACCTTGTC...CAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCACTAGAGGAAACATGTaGAAAAACAAGTCGATATCT +
Preference number: 4 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLTRGNM*KNKSIS
Trigger: AGATATCGACTTGTTTTTGCACATGTTTCCTCTAGT...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCTGGACTGGCCAGCCTaGCAACAGACCACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GKTKAQRFEPSFPTCWCLLDWPA*QQTTRN
Trigger: GTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAG...CAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp TATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTTCAGCCAAAACAAAAGGACGGGCGTGGTCTaGAGGAGGATCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: YKTLAEPTDLQENFSQNKRTGVV*RRISRP
Trigger: GGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCT...TTTGTTTTGGCTGAAATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATTCGAGCCAACATGTTGGTGTTTaGAGAAAAGTCCGGTCACGT +
Preference number: 4 (lower is better)
Translates to: PWNQNPSPWERRRHRDSSQHVGV*RKVRSR
Trigger: ACGTGACCGGACTTTTCTGCAAACACCAACATGTTG...GCTCGAATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp AGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACCACCCCCGAGTCATGTaGAGTCATACACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SHVQSYTPGRKSQYRIPDHPRVM*SHTLQA
Trigger: TGCCTGGAGTGTATGACTGCACATGACTCGGGGGTG...GTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GTCAGAGTCATCCCCAGAGCCATCTTGATCTTCAGGGGGCAAATTAGTAGCCACTTAGTAGCCACAATTTaGTGGGAAGCAGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: VRVIPRAILIFRGQISSHLVATI*WEAGRA
Trigger: CGCCCTCCCTGCTTCCCAGCAAATTGTGGCTACTAA...GTGGCTACTAATTTGCCCCCTGAAGATCAAGATGGCTCTGGGGATGACTCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR CCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAACCTGTGAGGCCCCCGTaGCCCCCTGATCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: SNKVYWAMNKELEETCAKPVRPP*PPDPLG
Trigger: CCCCAGTGGATCAGGGGGCCACGGGGGCCTCACAGG...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGGGTAGGCCCCGCCGTTaGCTTGTTTCGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQGRPRR*LVSAPP
Trigger: TGGAGGAGCCGAAACAAGCCAACGGCGGGGCCTACC...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAACAAGGAAGAGGCAAGTaGGGGCCTAGTGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAEQGRGK*GPSEWQ
Trigger: CTGCCACTCACTAGGCCCCCACTTGCCTCTTCCTTG...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGAGGTGCTGGCTGTGGTaGAAAGGTCCTATGCGAGAA +
Preference number: 4 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKRCWLW*KGPMRE
Trigger: TTCTCGCATAGGACCTTTCCACCACAGCCAGCACCT...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACGAAACCGAGTCAGAATaGTGCGATGCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHVQSYTPGRKSQYRIPDETESE*CDARCW
Trigger: CCAGCACCTGGCATCGCACCATTCTGACTCGGTTTC...GTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTCAGAGAAGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTGGGCAGGAAGTAACAAGGTCTACTaGGCTATGAACAAAGAACTA +
Preference number: 4 (lower is better)
Translates to: SQRSRVELPAHPTTPWAGSNKVY*AMNKEL
Trigger: TAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT...TCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCTTCTCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAAGAGGCAGTAACAAGGTCTACTaGGCTATGAACAAAGAACTA +
Preference number: 4 (lower is better)
Translates to: GLSMALSAWTQARLLERGSNKVY*AMNKEL
Trigger: TAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT...GCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp TGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGAGCCTTATAAAACCTTaGCTGAACCTACCGACCTCC +
Preference number: 4 (lower is better)
Translates to: CQQTTRNGATRQIVHTLLSLIKP*LNLPTS
Trigger: GGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCT...CAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGAATGAACCCAGCCTCTaGCTTGGGCACCGTCCCACG +
Preference number: 4 (lower is better)
Translates to: WGLELGNTEIDISLIKPWNEPSL*LGHRPT
Trigger: CGTGGGACGGTGCCCAAGCCAGAGGCTGGGTTCATT...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GCCATCTTGATCTTCAGGGGGCAAATTAGTAGCCACAATTTGCTGGGAAGCAGGGGAGGGGGTCTGCTGTaGCAAGGTGATATCTTGCAA +
Preference number: 4 (lower is better)
Translates to: AILIFRGQISSHNLLGSRGGGLL*QGDILQ
Trigger: TTGCAAGATATCACCTTGTCACAGCAGACCCCCTCC...CCTGCTTCCCAGCAAATTGTGGCTACTAATTTGCCCCCTGAAGATCAAGATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR TCA 90 bp TACCTCAGAAGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACAACAGGCACGACTGCTTaGAAGAGGCGGCGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: YLRSNKVYWAMNKELEETTGTTA*KRRRPH
Trigger: GTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGT...TGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACTTCTGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp AAGACTATCACTCTTTGGAAAATATTCCTGATTCCAGCCCAGGGCCCAGGGTGGACAGTCCTCTCTGTCTaGAGGCTGAGTCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: KTITLWKIFLIPAQGPGWTVLSV*RLSPSI
Trigger: AATGCTGGGACTCAGCCTTCAGACAGAGAGGACTGT...CCACCCTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAAGAGTGATAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp GATAGTCCATACCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACATTAGTAGCCACAATTTaGGGCAGGGCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DSPYPVAHMSDKLKRQHTLVATI*GRAGCR
Trigger: CCTGCAGCCGGCCCTGCCGCAAATTGTGGCTACTAA...TGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGTATGGACTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTAACCGAGTCAGAATGGTaGGATGCCAGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PCCTHERQTQETTHKLSLTESEW*DARCWL
Trigger: CAGCCAGCACCTGGCATCGCACCATTCTGACTCGGT...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGGCTCAGAGCCAGCTCTaGCCAAGACACCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQAQSQL*PRHPSS
Trigger: TGACGAGGGGTGTCTTGGGCAGAGCTGGCTCTGAGC...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGGTCAGAGAAGCAGAGTaGAGCTCCCAGCACACCCCA +
Preference number: 4 (lower is better)
Translates to: WGLELGNTEIDISLIKPWVREAE*SSQHTP
Trigger: TGGGGTGTGCTGGGAGCTCCACTCTGCTTCTCTGAC...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGTATGCGAGAAACCCCTaGTGCCCTAAGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GKTKAQRFEPSFPTCWCLYARNP*CPKSPG
Trigger: GCCTGGAGACTTAGGGCACCAGGGGTTTCTCGCATA...CAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACTCCAGAGCTGGACCTaGGGAGAGGCTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PCCTHERQTQETTHKLSLLQSWT*GEAASV
Trigger: AACTGAAGCAGCCTCTCCCCAGGTCCAGCTCTGGAG...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGCCCCACGAAACAAAGTaGACTCCTGTCCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WGLELGNTEIDISLIKPWPHETK*TPVPCH
Trigger: GTGGCAGGGGACAGGAGTCCACTTTGTTTCGTGGGG...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCACACATGAAGAAGCGAAGGCAGTaGCATTCACAGGACTACTTT +
Preference number: 4 (lower is better)
Translates to: DHQKRGHQTDSPYPVAHMKKRRQ*HSQDYF
Trigger: AAAGTAGTCCTGTGAATGCCACTGCCTTCGCTTCTT...CATGTGTGCAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGCAGAACAGGTCAAGCTGTGCTaGGGCCATCCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: DEGTEIRAKFPNMLVFAEQVKLC*GHPPSF
Trigger: AAAGGAAGGTGGATGGCCCCAGCACAGCTTGACCTG...TTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp CCCAGAGCCATCTTGATCTTCAGGGGGCAAATTAGTAGCCACAATTTGCTGGGATCCCCAGAGCCATCTTaGTCTTCAGGGGGCAAATTA +
Preference number: 4 (lower is better)
Translates to: PRAILIFRGQISSHNLLGSPEPS*SSGGKL
Trigger: TAATTTGCCCCCTGAAGATCAAGATGGCTCTGGGGA...TCCCAGCAAATTGTGGCTACTAATTTGCCCCCTGAAGATCAAGATGGCTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR TCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAAGGCACACAGCAAAGATaGGCCCCACGAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SNKVYWAMNKELEETCAKGTQQR*APRGLR
Trigger: CCGGAGGCCTCGTGGGGCTCATCTTTGCTGTGTGCC...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp AGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACGATCTTCCAGCCACATaGGGCCATTTAGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SHVQSYTPGRKSQYRIPDDLPAT*GHLGPK
Trigger: CTTTGGACCTAAATGGCCTCATGTGGCTGGAAGATC...GTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAAAGTGCTACAGGTGTGTaGGCCCCAAGCCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: SNKVYWAMNKELEETCAKSATGV*APSPTR
Trigger: GCGGGTGGGGCTTGGGGCTCACACACCTGTAGCACT...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTTTGGTGGTGCATCTCTaGTCCACAGACTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: IDISLIKPWLNLPTSRRILVVHL*STDWPT
Trigger: GGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAA...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp AAGACTATCACTCTTTGGAAAATATTCCTGATTCCAGCCCAGGGCCCAGGGTGGCAAGTGGAGGGGGTCTaGTGTGACAAGGTGATATCT +
Preference number: 4 (lower is better)
Translates to: KTITLWKIFLIPAQGPGWQVEGV*CDKVIS
Trigger: AGATATCACCTTGTCACAGCAGACCCCCTCCACTTG...CCACCCTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAAGAGTGATAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTAGGTCCTACCAGTAAGTaGTACAGGTGTGTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PCCTHERQTQETTHKLSLGPTSK*YRCVSP
Trigger: GGGGCTCACACACCTGTAGCACTTACTGGTAGGACC...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAACACGGCAGCCTGGACTaGCCAGCCTGCCAACAGACC +
Preference number: 4 (lower is better)
Translates to: SNKVYWAMNKELEETCAKHGSLD*PACQQT
Trigger: GGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTG...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGATGGCCCTGAGCGCATaGACACAGGCACGACTGCTT +
Preference number: 4 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQMALSA*TQARLL
Trigger: AAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCAT...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTATGGCCCTGAGCGCATaGACACAGGCACGACTGCTT +
Preference number: 4 (lower is better)
Translates to: IDISLIKPWLNLPTSRRIMALSA*TQARLL
Trigger: AAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCAT...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CAA 72 bp CAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTaGCAGAAAAGTCCGGTCACGTCACACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: QRFEPSFPTCWC*QKSPVTSHTAQ
Trigger: CTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CAA 72 bp GAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTaGGTGTTTGCAGAAAAGTCCGGTCACGTCACACAC +
Preference number: 4 (lower is better)
Translates to: EGTEIRAKFPNM*VFAEKSGHVTH
Trigger: GTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
3UTR CAA 72 bp GCCGGAGAAGTTGTCAGAGTCATCCCCAGAGCCATCTaGATCTTCAGGGGGCAAATTAGTAGCCACAATTTG +
Preference number: 4 (lower is better)
Translates to: AGEVVRVIPRAI*IFRGQISSHNL
Trigger: CAAATTGTGGCTACTAATTTGCCCCCTGAAGATCAAGATGGCTCTGGGGATGACTCTGACAACTTCTCCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR GCA 90 bp TACCTCAGAAGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACAGGGGAGGCCAGGGCCTaGAGTTCTTCAAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: YLRSNKVYWAMNKELEETGEARA*SSSRKR
Trigger: CCTCTTCCTTGAAGAACTGCAGGCCCTGGCCTCCCC...TGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACTTCTGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGGGTCCTACCAGTAAGTaGTACAGGTGTGTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQGPTSK*YRCVSP
Trigger: GGGGCTCACACACCTGTAGCACTTACTGGTAGGACC...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAAGGACACAGGCACGACTaGTTGAAAGAGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SNKVYWAMNKELEETCAKGHRHD*LKEAAA
Trigger: GGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCC...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGCCCCACGAAACAAAGTaGACAGGCTGCATGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQPHETK*TGCMSL
Trigger: CAGGGACATGCAGCCTGTCCACTTTGTTTCGTGGGG...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403076.5
CDS-3UTR TCA 90 bp GATAGTCCATACCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACATCCCCAGAGCCATCTTaGTCTTCAGGGGGCAAATTA +
Preference number: 4 (lower is better)
Translates to: DSPYPVAHMSDKLKRQHTSPEPS*SSGGKL
Trigger: TAATTTGCCCCCTGAAGATCAAGATGGCTCTGGGGA...TGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGTATGGACTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTATCCCCAGAGCCATCTTaGTCTTCAGGGGGCAAATTA +
Preference number: 4 (lower is better)
Translates to: PCCTHERQTQETTHKLSLSPEPS*SSGGKL
Trigger: TAATTTGCCCCCTGAAGATCAAGATGGCTCTGGGGA...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR TCA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTGGAGGGGGTCTGCTGTaGCAAGGTGATATCTTGCAA +
Preference number: 4 (lower is better)
Translates to: IDISLIKPWLNLPTSRRIGGGLL*QGDILQ
Trigger: TTGCAAGATATCACCTTGTCACAGCAGACCCCCTCC...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp TACCTCAGAAGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACACCGAGGTTTCAAAGGTaGAGTCCTGCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: YLRSNKVYWAMNKELEETPRFQR*SPAPQS
Trigger: GCTCTGGGGAGCAGGACTTCACCTTTGAAACCTCGG...TGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACTTCTGAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR TCA 90 bp GATAGTCCATACCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACATCTCTGTCTGAAGGCTaGGTCCCAGCATTCACTTCT +
Preference number: 4 (lower is better)
Translates to: DSPYPVAHMSDKLKRQHTSLSEG*VPAFTS
Trigger: AGAAGTGAATGCTGGGACTCAGCCTTCAGACAGAGA...TGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGTATGGACTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR GCA 90 bp AGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACCAACATGTTGGTGTTTaGAGAAAAGTCCGGTCACGT +
Preference number: 4 (lower is better)
Translates to: SHVQSYTPGRKSQYRIPDQHVGV*RKVRSR
Trigger: ACGTGACCGGACTTTTCTGCAAACACCAACATGTTG...GTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAAGCCAGGCTCCACTTCTaGCAGGACTACAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SNKVYWAMNKELEETCAKARLHF*QDYSLS
Trigger: GGAGAGGCTGTAGTCCTGCCAGAAGTGGAGCCTGGC...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGAGAATTCCTCCTGTTTaGTGGGCTTCTGGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQRIPPV*WASGRP
Trigger: GGGCCTACCAGAAGCCCACCAAACAGGAGGAATTCT...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp GAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGAGTAACAAGGTCTACTaGGCTATGAACAAAGAACTA +
Preference number: 4 (lower is better)
Translates to: EAASVWRNRVRMVRCQVLSNKVY*AMNKEL
Trigger: TAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT...CAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAAGCCCACCTCTCGGAGTaGCCAACGGAGTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SNKVYWAMNKELEETCAKAHLSE*PTESLK
Trigger: TTTCAGCGACTCCGTTGGCCACTCCGAGAGGTGGGC...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTTCAGCCAAAACAAAGGACACAGGTTCCCTTaGCTTGGTGGTGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: YKTLAEPTDLQENFSQNKGHRFP*LGGASL
Trigger: CAGAGATGCACCACCAAGCCAAGGGAACCTGTGTCC...TTTGTTTTGGCTGAAATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGCCTCCAAGGAGTAGCTaGCTTCGTCCTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQPPRSS*LRPSSS
Trigger: TGAAGAAGAAGGACGAAGGCAGCTACTCCTTGGAGG...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp GACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCACACATGACTAGAGGAAACATGTaGAAAAACAAGTCGATATCT +
Preference number: 4 (lower is better)
Translates to: DHQKRGHQTDSPYPVAHMTRGNM*KNKSIS
Trigger: AGATATCGACTTGTTTTTGCACATGTTTCCTCTAGT...CATGTGTGCAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAAGCCAGGTGCTGGCTGTaGTGGAAAGGTCCTATGCGA +
Preference number: 4 (lower is better)
Translates to: SNKVYWAMNKELEETCAKARCWL*WKGPMR
Trigger: TCGCATAGGACCTTTCCACCACAGCCAGCACCTGGC...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTGAGGCTGCTTCAGTTTaGAGAAACCGAGTCAGAATG +
Preference number: 4 (lower is better)
Translates to: IDISLIKPWLNLPTSRRIEAASV*RNRVRM
Trigger: CATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTAATTAGGGAAGCAAGATaGGGGGATACCGAATCAACT +
Preference number: 4 (lower is better)
Translates to: PCCTHERQTQETTHKLSLIREAR*GDTEST
Trigger: AGTTGATTCGGTATCCCCCCATCTTGCTTCCCTAAT...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp GATAGTCCATACCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAGTTTCCCAACATGTTaGTGTTTGCAGAAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: DSPYPVAHMSDKLKRQHTSFPTC*CLQKSP
Trigger: CGGACTTTTCTGCAAACACCAACATGTTGGGAAACT...TGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGGTATGGACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CCA 90 bp TATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTTCAGCCAAAACAAATTGCCATTTAGAAGATaGGGCTTGGAGCTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: YKTLAEPTDLQENFSQNKLPFRR*GLELGN
Trigger: GTTGCCAAGCTCCAAGCCCCATCTTCTAAATGGCAA...TTTGTTTTGGCTGAAATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR GCA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTAACTAGAGGAAACATGTaGAAAAACAAGTCGATATCT +
Preference number: 4 (lower is better)
Translates to: PCCTHERQTQETTHKLSLTRGNM*KNKSIS
Trigger: AGATATCGACTTGTTTTTGCACATGTTTCCTCTAGT...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CCA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAAAGTTTCCCAACATGTTaGTGTTTGCAGAAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: SNKVYWAMNKELEETCAKSFPTC*CLQKSP
Trigger: CGGACTTTTCTGCAAACACCAACATGTTGGGAAACT...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS GCA 90 bp CGCGGGTCGCGGCTGCGGGCCGGCTTCGCGGGTTCCGCTGCTCGATaGTCTCTTGGGCGCCTGCCCAGCGCGCCGCTGTCCCAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: RGSRLRAGFAGSAAR*SLGRLPSAPLSQAR
Trigger: CCTCGCCTGGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAGCCGGCCCGCAGCCGCGACCCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS GCA 90 bp GGGCCGGCTTCGCGGGTTCCGCTGCTCGATGCTCTCTTGGGCGCCTaGCCAGCGCGCCGCTGTCCCAGGCGAGGGCTGCAGGGTCCGCCG +
Preference number: 5 (lower is better)
Translates to: GPASRVPLLDALLGA*PARRCPRRGLQGPP
Trigger: CGGCGGACCCTGCAGCCCTCGCCTGGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAGCCGGCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS GCA 90 bp CAGGCTGCGCGGGTCGCGGCTGCGGGCCGGCTTCGCGGGTTCCGCTaGTCGATGCTCTCTTGGGCGCCTGCCCAGCGCGCCGCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: QAARVAAAGRLRGFR*SMLSWAPAQRAAVP
Trigger: TGGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAGCCGGCCCGCAGCCGCGACCCGCGCAGCCTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS CCA 90 bp GCGGCTGCGGGCCGGCTTCGCGGGTTCCGCTGCTCGATGCTCTCTTaGGCGCCTGCCCAGCGCGCCGCTGTCCCAGGCGAGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AAAGRLRGFRCSMLS*APAQRAAVPGEGCR
Trigger: CCTGCAGCCCTCGCCTGGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAGCCGGCCCGCAGCCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS CCA 90 bp CCGCAAGCCGCGGTTCCCGGCCTTTCAGCTCGGCTGCTCCCTGGGTaGTGGGGCCGAGGCGCACCCCCTTCTGCCCGGGCCCGGAGTGCG +
Preference number: 5 (lower is better)
Translates to: PQAAVPGLSARLLPG*WGRGAPPSARARSA
Trigger: CGCACTCCGGGCCCGGGCAGAAGGGGGTGCGCCTCGGCCCCACCACCCAGGGAGCAGCCGAGCTGAAAGGCCGGGAACCGCGGCTTGCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS CCA 90 bp CAAGCCGCGGTTCCCGGCCTTTCAGCTCGGCTGCTCCCTGGGTGGTaGGGCCGAGGCGCACCCCCTTCTGCCCGGGCCCGGAGTGCGGAG +
Preference number: 5 (lower is better)
Translates to: QAAVPGLSARLLPGW*GRGAPPSARARSAE
Trigger: CTCCGCACTCCGGGCCCGGGCAGAAGGGGGTGCGCCTCGGCCCCACCACCCAGGGAGCAGCCGAGCTGAAAGGCCGGGAACCGCGGCTTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS-3UTR CAA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCCCGAGCTCCGCCTGCTaGGCTCCCGCTCCTCCGGTG +
Preference number: 5 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPAPSSAC*APAPPV
Trigger: CACCGGAGGAGCGGGAGCCAAGCAGGCGGAGCTCGG...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS CCA 90 bp CCCAGCGCGCCGCTGTCCCAGGCGAGGGCTGCAGGGTCCGCCGGCTaGAGTCCGCTCTCTACTGCCGGATTCCTCTCCGCTCGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: PSAPLSQARAAGSAG*SPLSTAGFLSARLG
Trigger: TCCGAGCCGAGCGGAGAGGAATCCGGCAGTAGAGAGCGGACTCCAGCCGGCGGACCCTGCAGCCCTCGCCTGGGACAGCGGCGCGCTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS GCA 90 bp CCAGGCGAGGGCTGCAGGGTCCGCCGGCTGGAGTCCGCTCTCTACTaGCGGATTCCTCTCCGCTCGGCTCGGATTCGGCCCGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: PGEGCRVRRLESALY*RIPLRSARIRPAPL
Trigger: GAGAGGTGCGGGCCGAATCCGAGCCGAGCGGAGAGGAATCCGGCAGTAGAGAGCGGACTCCAGCCGGCGGACCCTGCAGCCCTCGCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS CCA 90 bp TTGGCTCCCGCTCCTCCGGTGGCCGAACGTCGCTTTCGGGAGCTGTaGTCCCCGCAAGCCGCGGTTCCCGGCCTTTCAGCTCGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LAPAPPVAERRFREL*SPQAAVPGLSARLL
Trigger: GAGCAGCCGAGCTGAAAGGCCGGGAACCGCGGCTTGCGGGGACCACAGCTCCCGAAAGCGACGTTCGGCCACCGGAGGAGCGGGAGCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS-3UTR CAA 90 bp GCCTCCAGGCCGGTGGGTTCTGGAGACGTGGGAATAGCCGTCAGGAGCTGCGTGCTGCTCGATGCTCTCTaGGGCGCCTGCCCAGCGCGC +
Preference number: 5 (lower is better)
Translates to: ASRPVGSGDVGIAVRSCVLLDAL*GACPAR
Trigger: GCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAG...CACGCAGCTCCTGACGGCTATTCCCACGTCTCCAGAACCCACCGGCCTGGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR CAA 90 bp CGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCTGGTGGCTGTGGTCGTaGAGGCCAGATGAGTGGTCG +
Preference number: 5 (lower is better)
Translates to: RRHRQDGRGLQEDLQAPAWWLWS*RPDEWS
Trigger: CGACCACTCATCTGGCCTCAACGACCACAGCCACCA...GGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CAA 90 bp GAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCTGCTCGATGCTCTCTaGGGCGCCTGCCCAGCGCGC +
Preference number: 5 (lower is better)
Translates to: ESQHSLLTRASPTWQRPRLLDAL*GACPAR
Trigger: GCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAG...CCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CAA 90 bp AGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTCCTGAGCCGGAGAAGTaGTCAGAGTCATCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: RQDGRGLQEDLQAPAALPPEPEK*SESSPE
Trigger: CTCTGGGGATGACTCTGACAACTTCTCCGGCTCAGG...AGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CAA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACAAACCCAGCCTCTGGCTaGGGCACCGTCCCACGGACC +
Preference number: 5 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTNPASG*GTVPRT
Trigger: GGTCCGTGGGACGGTGCCCAAGCCAGAGGCTGGGTT...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCCACAGGCACGACTGCTaGAAAGAGGCGGCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: VPAFTSHTGFSNVAAAQAHRHDC*KEAAAP
Trigger: TGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG...GGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CAA 90 bp AGTCAGAGAAGCAGAGTGGAGCTCCCAGCACACCCCACGACTCCGTGGGCAGGACACAGGCACGACTGCTaGAAAGAGGCGGCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SQRSRVELPAHPTTPWAGHRHDC*KEAAAP
Trigger: TGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG...TCCTGCCCACGGAGTCGTGGGGTGTGCTGGGAGCTCCACTCTGCTTCTCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GAGGGACCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATCTGCTCGATGCTCTCTaGGGCGCCTGCCCAGCGCGC +
Preference number: 5 (lower is better)
Translates to: EGPWNQNPSPWERRRHRDLLDAL*GACPAR
Trigger: GCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAG...ATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCTGGTGGCTGTGGTCGTaGAGGCCAGATGAGTGGTCG +
Preference number: 5 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLWWLWS*RPDEWS
Trigger: CGACCACTCATCTGGCCTCAACGACCACAGCCACCA...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CAA 90 bp GGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAAGTGTGAAGGTCAGCTaGGCTGGGTCCTGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: GPGLSMALSAWTQARLLESVKVS*AGSCRG
Trigger: ACCCCTGCAGGACCCAGCCAAGCTGACCTTCACACT...TTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp AAGCAGCCCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGAGATGGGGCTTGGAGCTaGGCAACACAGAAATTGACA +
Preference number: 5 (lower is better)
Translates to: KQPLETAPQAGRAWSAGGDGAWS*ATQKLT
Trigger: TGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCATC...TCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAAGAGGCCCTGAGCCGGAGAAGTaGTCAGAGTCATCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GLSMALSAWTQARLLERGPEPEK*SESSPE
Trigger: CTCTGGGGATGACTCTGACAACTTCTCCGGCTCAGG...GCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS CCA 90 bp AAGGACCTCCATCCTCTGTGTGGGGAGTGTGAAGGTCAGCTTGGCTaGGTCCTGCAGGGGTTGAGGTCTCATGGTGGCCAGGCTGCATGT +
Preference number: 5 (lower is better)
Translates to: KDLHPLCGECEGQLG*VLQGLRSHGGQAAC
Trigger: ACATGCAGCCTGGCCACCATGAGACCTCAACCCCTGCAGGACCCAGCCAAGCTGACCTTCACACTCCCCACACAGAGGATGGAGGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000429035.1
CDS-3UTR CAA 90 bp CATGTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGCTGCTCGATGCTCTCTaGGGCGCCTGCCCAGCGCGC +
Preference number: 5 (lower is better)
Translates to: HVGVCRKVRSRHTQHRGKLLDAL*GACPAR
Trigger: GCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAG...CTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGCACACATGGGCCCCGCCGTTGGCTaGTTTCGGCTCCTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: DHQKRGHQTDSPYPVAHMGPAVG*FRLLQG
Trigger: TCCTTGGAGGAGCCGAAACAAGCCAACGGCGGGGCC...CATGTGTGCAACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp CCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCGCCATCCACCTTCCTTaGCCATTTAGAAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: PSIHFSHGLLQRGSGPGLAIHLP*PFRRWG
Trigger: GCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGGC...GAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GAGGGACCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATTGGTGGCTGTGGTCGTaGAGGCCAGATGAGTGGTCG +
Preference number: 5 (lower is better)
Translates to: EGPWNQNPSPWERRRHRDWWLWS*RPDEWS
Trigger: CGACCACTCATCTGGCCTCAACGACCACAGCCACCA...ATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACACCAACATGTTGGTGTTaGCAGAAAAGTCCGGTCACG +
Preference number: 5 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTPTCWC*QKSPVT
Trigger: CGTGACCGGACTTTTCTGCAAACACCAACATGTTGG...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp TGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACAAGAGGCTGCTTCAGTTaGGAGAAACCGAGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: CPRCLRGRPRLHTSAVTTRGCFS*EKPSQN
Trigger: ATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTCT...TGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GTTGGTGTTTGCAGAAAAGTCCGGTCACGTCACACACAGCACAGAGGCAAGAAGCACAGGCACGACTGCTaGAAAGAGGCGGCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: VGVCRKVRSRHTQHRGKKHRHDC*KEAAAP
Trigger: TGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTG...CTTCTTGCCTCTGTGCTGTGTGTGACGTGACCGGACTTTTCTGCAAACACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCAACATGTTGGTGTTaGCAGAAAAGTCCGGTCACG +
Preference number: 5 (lower is better)
Translates to: ESQHSLLTRASPTWQRPRPTCWC*QKSPVT
Trigger: CGTGACCGGACTTTTCTGCAAACACCAACATGTTGG...CCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GGTTCTGGAGACGTGGGAATAGCCGTCAGGAGCTGCGTGTCCTTCCAAGTGGAGATTAGTAGCCACAATTaGCTGGGAAGCAGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GSGDVGIAVRSCVSFQVEISSHN*LGSREG
Trigger: GCCCTCCCTGCTTCCCAGCAAATTGTGGCTACTAAT...CTCCACTTGGAAGGACACGCAGCTCCTGACGGCTATTCCCACGTCTCCAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR CAA 90 bp GGAAAGACGAAGGCACAGAGATTCGAGCCAAGTTTCCCAACATGTTGGTGTTTGGGCCCCGCCGTTGGCTaGTTTCGGCTCCTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: GKTKAQRFEPSFPTCWCLGPAVG*FRLLQG
Trigger: TCCTTGGAGGAGCCGAAACAAGCCAACGGCGGGGCC...CAAACACCAACATGTTGGGAAACTTGGCTCGAATCTCTGTGCCTTCGTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp CCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATTCGAGCGCCATCCACCTTCCTTaGCCATTTAGAAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: PWNQNPSPWERRRHRDSSAIHLP*PFRRWG
Trigger: GCCCCATCTTCTAAATGGCAAAGGAAGGTGGATGGC...GCTCGAATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp CGGAGAAGTTGTCAGAGTCATCCCCAGAGCCATCTTGATCTTCAGGGGGCAAATCCTGAGCCGGAGAAGTaGTCAGAGTCATCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: RRSCQSHPQSHLDLQGANPEPEK*SESSPE
Trigger: CTCTGGGGATGACTCTGACAACTTCTCCGGCTCAGG...ATTTGCCCCCTGAAGATCAAGATGGCTCTGGGGATGACTCTGACAACTTCTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS-3UTR CAA 90 bp TGGCTGTGGTGGAAAGGTCCTATGCGAGAAACCCCTGGTGCCCTAAGTCTCCAGCAGCCTTATAAAACCTaGGCTGAACCTACCGACCTC +
Preference number: 5 (lower is better)
Translates to: WLWWKGPMRETPGALSLQQPYKT*AEPTDL
Trigger: GAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTG...CTGGAGACTTAGGGCACCAGGGGTTTCTCGCATAGGACCTTTCCACCACAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GAGGGACCCTGGAACCAGAATCCCTCCCCATGGGAAAGACGAAGGCACAGAGATCAGCCTTATAAAACCTaGGCTGAACCTACCGACCTC +
Preference number: 5 (lower is better)
Translates to: EGPWNQNPSPWERRRHRDQPYKT*AEPTDL
Trigger: GAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTG...ATCTCTGTGCCTTCGTCTTTCCCATGGGGAGGGATTCTGGTTCCAGGGTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GAGGCTGCTTCAGTTTGGAGAAACCGAGTCAGAATGGTGCGATGCCAGGTGCTGGATGGGGCTTGGAGCTaGGCAACACAGAAATTGACA +
Preference number: 5 (lower is better)
Translates to: EAASVWRNRVRMVRCQVLDGAWS*ATQKLT
Trigger: TGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCATC...CAGCACCTGGCATCGCACCATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp AAGACTATCACTCTTTGGAAAATATTCCTGATTCCAGCCCAGGGCCCAGGGTGGCGGACACAGGTTCCCTaGGCTTGGTGGTGCATCTCT +
Preference number: 5 (lower is better)
Translates to: KTITLWKIFLIPAQGPGWRTQVP*AWWCIS
Trigger: AGAGATGCACCACCAAGCCAAGGGAACCTGTGTCCG...CCACCCTGGGCCCTGGGCTGGAATCAGGAATATTTTCCAAAGAGTGATAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp TGGGGCTTGGAGCTTGGCAACACAGAAATTGACATCAGCCTTATAAAACCTTGGCCTGAGCCGGAGAAGTaGTCAGAGTCATCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: WGLELGNTEIDISLIKPWPEPEK*SESSPE
Trigger: CTCTGGGGATGACTCTGACAACTTCTCCGGCTCAGG...CCAAGGTTTTATAAGGCTGATGTCAATTTCTGTGTTGCCAAGCTCCAAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp CCCTGTTGCACACATGAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACGGACACAGGTTCCCTaGGCTTGGTGGTGCATCTCT +
Preference number: 5 (lower is better)
Translates to: PCCTHERQTQETTHKLSLRTQVP*AWWCIS
Trigger: AGAGATGCACCACCAAGCCAAGGGAACCTGTGTCCG...TAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTCATGTGTGCAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp AGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACATGTGCAAAAAACCCAGCCTCTGGCTaGGGCACCGTCCCACGGACC +
Preference number: 5 (lower is better)
Translates to: SNKVYWAMNKELEETCAKNPASG*GTVPRT
Trigger: GGTCCGTGGGACGGTGCCCAAGCCAGAGGCTGGGTT...TTTTGCACATGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp CTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCTGTTGGAGTCGCTGAAACGTaGTCAAATAAGCAAGTAAGT +
Preference number: 5 (lower is better)
Translates to: LPTDHQKRGHQTDSPYPVGVAET*SNKQVS
Trigger: ACTTACTTGCTTATTTGACAACGTTTCAGCGACTCC...AACAGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp TACCTCAGAAGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACAAGTGTGAAGGTCAGCTaGGCTGGGTCCTGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: YLRSNKVYWAMNKELEETSVKVS*AGSCRG
Trigger: ACCCCTGCAGGACCCAGCCAAGCTGACCTTCACACT...TGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACTTCTGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp GAGCGACAAACTCAAGAGACAACACACAAACTAAGCCTACATTTTGGCTTCCAGATCCCCAGAGCCATCTaGATCTTCAGGGGGCAAATT +
Preference number: 5 (lower is better)
Translates to: ERQTQETTHKLSLHFGFQIPRAI*IFRGQI
Trigger: AATTTGCCCCCTGAAGATCAAGATGGCTCTGGGGAT...CTGGAAGCCAAAATGTAGGCTTAGTTTGTGTGTTGTCTCTTGAGTTTGTCGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS-3UTR CAA 90 bp ATTGACATCAGCCTTATAAAACCTTGGCTGAACCTACCGACCTCCAGGAGAATTAGAGGCTGCTTCAGTTaGGAGAAACCGAGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: IDISLIKPWLNLPTSRRIRGCFS*EKPSQN
Trigger: ATTCTGACTCGGTTTCTCCAAACTGAAGCAGCCTCT...AATTCTCCTGGAGGTCGGTAGGTTCAGCCAAGGTTTTATAAGGCTGATGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS-3UTR CAA 90 bp TACCTCAGAAGTAACAAGGTCTACTGGGCTATGAACAAAGAACTAGAGGAAACAGGAGTCGCTGAAACGTaGTCAAATAAGCAAGTAAGT +
Preference number: 5 (lower is better)
Translates to: YLRSNKVYWAMNKELEETGVAET*SNKQVS
Trigger: ACTTACTTGCTTATTTGACAACGTTTCAGCGACTCC...TGTTTCCTCTAGTTCTTTGTTCATAGCCCAGTAGACCTTGTTACTTCTGAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS GCA 72 bp GGCGGCGGGAGAGCGGCAGGCTGCGCGGGTCGCGGCTaGGGGCCGGCTTCGCGGGTTCCGCTGCTCGATGCT +
Preference number: 6 (lower is better)
Translates to: GGGRAAGCAGRG*GPASRVPLLDA
Trigger: AGCATCGAGCAGCGGAACCCGCGAAGCCGGCCCGCAGCCGCGACCCGCGCAGCCTGCCGCTCTCCCGCCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS GCA 72 bp CGCACAGCCAGAGCCAGAGCGCCGCGCGCCTCATGCTaGCCGGACCGGCGGCGGGAGAGCGGCAGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: RTARARAPRASC*PDRRRESGRLR
Trigger: GCGCAGCCTGCCGCTCTCCCGCCGCCGGTCCGGGCAGCATGAGGCGCGCGGCGCTCTGGCTCTGGCTGTGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS GCA 72 bp GCGCGCACAGCCAGAGCCAGAGCGCCGCGCGCCTCATaGTGCCCGGACCGGCGGCGGGAGAGCGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ARTARARAPRAS*CPDRRRESGRL
Trigger: CAGCCTGCCGCTCTCCCGCCGCCGGTCCGGGCAGCATGAGGCGCGCGGCGCTCTGGCTCTGGCTGTGCGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS GCA 72 bp CGGGTCGCGGCTGCGGGCCGGCTTCGCGGGTTCCGCTaGTCGATGCTCTCTTGGGCGCCTGCCCAGCGCGCC +
Preference number: 6 (lower is better)
Translates to: RVAAAGRLRGFR*SMLSWAPAQRA
Trigger: GGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAGCCGGCCCGCAGCCGCGACCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS CAA 90 bp CGCGGCTGCGGGCCGGCTTCGCGGGTTCCGCTGCTCGATGCTCTCTaGGGCGCCTGCCCAGCGCGCCGCTGTCCCAGGCGAGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: RGCGPASRVPLLDAL*GACPARRCPRRGLQ
Trigger: CTGCAGCCCTCGCCTGGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAGCCGGCCCGCAGCCGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS GCA 72 bp GCGCCTGCCCAGCGCGCCGCTGTCCCAGGCGAGGGCTaGAGGGTCCGCCGGCTGGAGTCCGCTCTCTACTGC +
Preference number: 6 (lower is better)
Translates to: APAQRAAVPGEG*RVRRLESALYC
Trigger: GCAGTAGAGAGCGGACTCCAGCCGGCGGACCCTGCAGCCCTCGCCTGGGACAGCGGCGCGCTGGGCAGGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS GCA 72 bp CGGCTGCGGGCCGGCTTCGCGGGTTCCGCTGCTCGATaGTCTCTTGGGCGCCTGCCCAGCGCGCCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: RLRAGFAGSAAR*SLGRLPSAPLS
Trigger: GGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAGCCGGCCCGCAGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS CCA 72 bp GGCCGGCTTCGCGGGTTCCGCTGCTCGATGCTCTCTTaGGCGCCTGCCCAGCGCGCCGCTGTCCCAGGCGAG +
Preference number: 6 (lower is better)
Translates to: GRLRGFRCSMLS*APAQRAAVPGE
Trigger: CTCGCCTGGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGAAGCCGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS CCA 72 bp AGCCGCGGTTCCCGGCCTTTCAGCTCGGCTGCTCCCTaGGTGGTGGGGCCGAGGCGCACCCCCTTCTGCCCG +
Preference number: 6 (lower is better)
Translates to: SRGSRPFSSAAP*VVGPRRTPFCP
Trigger: CGGGCAGAAGGGGGTGCGCCTCGGCCCCACCACCCAGGGAGCAGCCGAGCTGAAAGGCCGGGAACCGCGGCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS GCA 72 bp TCGCGGGTTCCGCTGCTCGATGCTCTCTTGGGCGCCTaGCCAGCGCGCCGCTGTCCCAGGCGAGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SRVPLLDALLGA*PARRCPRRGLQ
Trigger: CTGCAGCCCTCGCCTGGGACAGCGGCGCGCTGGGCAGGCGCCCAAGAGAGCATCGAGCAGCGGAACCCGCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS CCA 72 bp CGCCGAGCTCCGCCTGCTTGGCTCCCGCTCCTCCGGTaGCCGAACGTCGCTTTCGGGAGCTGTGGTCCCCGC +
Preference number: 6 (lower is better)
Translates to: RRAPPAWLPLLR*PNVAFGSCGPR
Trigger: GCGGGGACCACAGCTCCCGAAAGCGACGTTCGGCCACCGGAGGAGCGGGAGCCAAGCAGGCGGAGCTCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS GCA 72 bp GGCTGCAGGGTCCGCCGGCTGGAGTCCGCTCTCTACTaGCGGATTCCTCTCCGCTCGGCTCGGATTCGGCCC +
Preference number: 6 (lower is better)
Translates to: GCRVRRLESALY*RIPLRSARIRP
Trigger: GGGCCGAATCCGAGCCGAGCGGAGAGGAATCCGGCAGTAGAGAGCGGACTCCAGCCGGCGGACCCTGCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS CCA 72 bp CCGCTGTCCCAGGCGAGGGCTGCAGGGTCCGCCGGCTaGAGTCCGCTCTCTACTGCCGGATTCCTCTCCGCT +
Preference number: 6 (lower is better)
Translates to: PLSQARAAGSAG*SPLSTAGFLSA
Trigger: AGCGGAGAGGAATCCGGCAGTAGAGAGCGGACTCCAGCCGGCGGACCCTGCAGCCCTCGCCTGGGACAGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000447124.1
CDS CCA 72 bp GCTCCTCCGGTGGCCGAACGTCGCTTTCGGGAGCTGTaGTCCCCGCAAGCCGCGGTTCCCGGCCTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: APPVAERRFREL*SPQAAVPGLSA
Trigger: AGCTGAAAGGCCGGGAACCGCGGCTTGCGGGGACCACAGCTCCCGAAAGCGACGTTCGGCCACCGGAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381150.5
CDS TCA 72 bp TCCTGGGCCGTGGTGGCTGTGGTCGTTGAGGCCAGATaGGTGGTCGGGAGCTGTGTGGTCTCCCTGGGTCGG +
Preference number: 6 (lower is better)
Translates to: SWAVVAVVVEAR*VVGSCVVSLGR
Trigger: CCGACCCAGGGAGACCACACAGCTCCCGACCACTCATCTGGCCTCAACGACCACAGCCACCACGGCCCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
ENST00000429035.1
CDS CCA 72 bp GTTCTTCAAGGAAGAGGCAAGTGGGGGCCTAGTGAGTaGCAGGGCGGAGGGGGCGCATGGCTCCCGCGTCAG +
Preference number: 6 (lower is better)
Translates to: VLQGRGKWGPSE*QGGGGAWLPRQ
Trigger: CTGACGCGGGAGCCATGCGCCCCCTCCGCCCTGCCACTCACTAGGCCCCCACTTGCCTCTTCCTTGAAGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS GCA 72 bp GGCAAATTAGTAGCCACAATTTGCGGCAGGGCCGGCTaGAGGCTCAGCGCCAGCGCGCACAGCCAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: GKLVATICGRAG*RLSASAHSQSQ
Trigger: CTGGCTCTGGCTGTGCGCGCTGGCGCTGAGCCTGCAGCCGGCCCTGCCGCAAATTGTGGCTACTAATTTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000403076.5
CDS TCA 72 bp CGGTCTCAGAAACGACTGTCCCTACCTCATCTCCCATaGGACAGACTCGGCAGGGCCGGCTGCAGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: RSQKRLSLPHLP*DRLGRAGCRLS
Trigger: GCTGAGCCTGCAGCCGGCCCTGCCGAGTCTGTCTCATGGGAGATGAGGTAGGGACAGTCGTTTCTGAGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447124.1
CDS CCA 72 bp AAAGGTGAAGTCCTGCTCCCCAGAGCCCTCTGCTGCTaGGAGCTGACTGGAGGCTCCATCCTCAGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: KGEVLLPRALCC*ELTGGSILSSP
Trigger: AGGGCTGCTGAGGATGGAGCCTCCAGTCAGCTCCCAGCAGCAGAGGGCTCTGGGGAGCAGGACTTCACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5
CDS CCA 72 bp CATCCTCTGTGTGGGGAGTGTGAAGGTCAGCTTGGCTaGGTCCTGCAGGGGTTGAGGTCTCATGGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: HPLCGECEGQLG*VLQGLRSHGGQ
Trigger: CTGGCCACCATGAGACCTCAACCCCTGCAGGACCCAGCCAAGCTGACCTTCACACTCCCCACACAGAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254351.9
ENST00000381150.5
ENST00000429035.1
CDS CAA 72 bp CTGTTTGGTGGGCTTCTGGTAGGCCCCGCCGTTGGCTaGTTTCGGCTCCTCCAAGGAGTAGCTGCCTTCGTC +
Preference number: 6 (lower is better)
Translates to: LFGGLLVGPAVG*FRLLQGVAAFV
Trigger: GACGAAGGCAGCTACTCCTTGGAGGAGCCGAAACAAGCCAACGGCGGGGCCTACCAGAAGCCCACCAAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254351.9
ENST00000381150.5