RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCYL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000000457

Ensembl transcript IDs: ENST00000367770.5, ENST00000367771.11, ENST00000367772.8, ENST00000423670.1, ENST00000470238.1

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTACAGGTCAGCGCTGCATACAATAGCAGGGGCTTTGGAAGCAACTaGGTCACTACTCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAAT +
Preference number: 1 (lower is better)
Translates to: VQVSAAYNSRGFGSN*VTTPKGSCSSLAFN
Trigger: ATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGAGTAGTGACTCAGTTGCTTCCAAAGCCCCTGCTATTGTATGCAGCGCTGACCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 90 bp TTAGCCAGCACTCACAGTCAGTCTCCTACTTCAGTTGGCACAGACTaGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGT +
Preference number: 1 (lower is better)
Translates to: LASTHSQSPTSVGTD*IMSSWDGKSRPLWG
Trigger: ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGACTGTGAGTGCTGGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR CCA 90 bp TTGGAAGCAACTGAGTCACTACTCCAAAAGGGTCCTGCTCCAGCCTaGCTTTCAATGGAAATGGAGGCGCTCCAAGAAAGGATGGATAAG +
Preference number: 1 (lower is better)
Translates to: LEATESLLQKGPAPA*LSMEMEALQERMDK
Trigger: CTTATCCATCCTTTCTTGGAGCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGAGTAGTGACTCAGTTGCTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 90 bp CTTGTTTATAAGACATGTAAGCTTGGACTATGCAGCACTTCTCATTaGGAGCCCTTTGGGACAGGATACTTGTTGTATACCACATACAAA +
Preference number: 1 (lower is better)
Translates to: LVYKTCKLGLCSTSH*EPFGTGYLLYTTYK
Trigger: TTTGTATGTGGTATACAACAAGTATCCTGTCCCAAAGGGCTCCCAATGAGAAGTGCTGCATAGTCCAAGCTTACATGTCTTATAAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 90 bp GTGGGGAATATTCTTATTAAGAACTTTGGTACAATGTACTACATGTaGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTC +
Preference number: 1 (lower is better)
Translates to: VGNILIKNFGTMYYM*NSQELPRSTKNHLL
Trigger: GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAAAGTTCTTAATAAGAATATTCCCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR TCA 90 bp CAAGAAAGGATGGATAAGCTAAAACGTTACATACATACTCTAGGGTaGAACTTATCACTAGGCAGAACTGGGTTTGATGCTTTGTCAACT +
Preference number: 1 (lower is better)
Translates to: QERMDKLKRYIHTLG*NLSLGRTGFDALST
Trigger: AGTTGACAAAGCATCAAACCCAGTTCTGCCTAGTGATAAGTTTCACCCTAGAGTATGTATGTAACGTTTTAGCTTATCCATCCTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR GCA 90 bp TTAAGAACTTTGGTACAATGTACTACATGTGGAACAGTCAGGAACTaGCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTAACTGTA +
Preference number: 1 (lower is better)
Translates to: LRTLVQCTTCGTVRN*LGPQRTIYSDSLTV
Trigger: TACAGTTAGACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAAAGTTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR GCA 90 bp AAATACATTTATGAACTTGTTTATAAGACATGTAAGCTTGGACTATaGAGCACTTCTCATTGGGAGCCCTTTGGGACAGGATACTTGTTG +
Preference number: 1 (lower is better)
Translates to: KYIYELVYKTCKLGL*STSHWEPFGTGYLL
Trigger: CAACAAGTATCCTGTCCCAAAGGGCTCCCAATGAGAAGTGCTGCATAGTCCAAGCTTACATGTCTTATAAACAAGTTCATAAATGTATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR TCA 90 bp CCTGTAGTTTGGGGTGTAATAGCACTGATTATCCAGGCAGTGAGATaGCTAATGAGGATCCCTAAGCTATTAATAATCATAATTAAATAC +
Preference number: 1 (lower is better)
Translates to: PVVWGVIALIIQAVR*LMRIPKLLIIIIKY
Trigger: GTATTTAATTATGATTATTAATAGCTTAGGGATCCTCATTAGTCATCTCACTGCCTGGATAATCAGTGCTATTACACCCCAAACTACAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 90 bp AGTATTTATAGATCAGTCCATGTGACTTCCAGAATTTGCCTAGTATaGTTGAACACTCAGCACTTAAATTATGTGGCCATTTCATATCTA +
Preference number: 1 (lower is better)
Translates to: SIYRSVHVTSRICLV*LNTQHLNYVAISYL
Trigger: TAGATATGAAATGGCCACATAATTTAAGTGCTGAGTGTTCAACCATACTAGGCAAATTCTGGAAGTCACATGGACTGATCTATAAATACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 90 bp AGTGTCTCAGTTCTGAAGAAACTAAGAACAAAGTTGTATCCTTTCTaGAGAAGGTACTTTCTTTACATGGCTCATGTTTTATTCTTTGTC +
Preference number: 1 (lower is better)
Translates to: SVSVLKKLRTKLYPF*RRYFLYMAHVLFFV
Trigger: GACAAAGAATAAAACATGAGCCATGTAAAGAAAGTACCTTCTCCAGAAAGGATACAACTTTGTTCTTAGTTTCTTCAGAACTGAGACACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CAA 90 bp TGGGAAGAAGAGTACAGGTCAGCGCTGCATACAATAGCAGGGGCTTaGGAAGCAACTGAGTCACTACTCCAAAAGGGTCCTGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: WEEEYRSALHTIAGA*EATESLLQKGPAPA
Trigger: GGCTGGAGCAGGACCCTTTTGGAGTAGTGACTCAGTTGCTTCCAAAGCCCCTGCTATTGTATGCAGCGCTGACCTGTACTCTTCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR CCA 90 bp CACTACTCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAATGGAAATGGAGGCGCGTCTCCTACTTCAGTTaGCACAGACTGGATAATGAG +
Preference number: 2 (lower is better)
Translates to: HYSKRVLLQPGFQWKWRRVSYFS*HRLDNE
Trigger: CTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGAC...GCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGAGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR TCA 90 bp AGAACTTTGGTACAATGTACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCATGGAAACCAGTACTGTaGGCCTCACCACCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: RTLVQCTTCGTVRNCLGPWKPVL*ASPPRA
Trigger: AGCCCTGGGTGGTGAGGCTCACAGTACTGGTTTCCA...TGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAAAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR TCA 90 bp GGCAAATTCTGCCCTTTTTACTTACTGACGAAACAAACCAGTGTGGTTTCCAGCTGGAAACCAGTACTGTaGGCCTCACCACCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GKFCPFYLLTKQTSVVSSWKPVL*ASPPRA
Trigger: AGCCCTGGGTGGTGAGGCTCACAGTACTGGTTTCCA...GCTGGAAACCACACTGGTTTGTTTCGTCAGTAAGTAAAAAGGGCAGAATTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR CCA 90 bp TACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCAATGAGCTCCTGGGATaGGAAAAGCAGGCCACTTTG +
Preference number: 2 (lower is better)
Translates to: YLLFIETGLSQMHKGSSSNELLG*EKQATL
Trigger: CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATT...GGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp GGAGCCCTTTGGGACAGGATACTTGTTGTATACCACATACAAACTAAGACACTGCGTCAGGAGTTCCCCTaGGAAGAAGAGTACAGGTCA +
Preference number: 2 (lower is better)
Translates to: GALWDRILVVYHIQTKTLRQEFP*EEEYRS
Trigger: TGACCTGTACTCTTCTTCCCAGGGGAACTCCTGACG...CAGTGTCTTAGTTTGTATGTGGTATACAACAAGTATCCTGTCCCAAAGGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR CCA 90 bp AGAACTTTGGTACAATGTACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCAAATGAGCTCCTGGGATaGGAAAAGCAGGCCACTTTG +
Preference number: 2 (lower is better)
Translates to: RTLVQCTTCGTVRNCLGPNELLG*EKQATL
Trigger: CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATT...TGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAAAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp GTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTAACTGTATGGATAATGAGCTCCTaGGATGGGAAAAGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: VRNCLGPQRTIYSDSLTVWIMSS*DGKSRP
Trigger: TGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCA...TACAGTTAGACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGATCAGTTGGCACAGACTaGATAATGAGCTCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRSVGTD*IMSSWD
Trigger: ATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGA...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp CTTAGGGACCCTGAAGGAATCATGAGTTTATCACCTTTGAGGATCCTCTGGGACGCTCTTCATAGAAACTaGCCTCAGTCAAATGCACAA +
Preference number: 2 (lower is better)
Translates to: LRDPEGIMSLSPLRILWDALHRN*PQSNAQ
Trigger: TTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGC...GTCCCAGAGGATCCTCAAAGGTGATAAACTCATGATTCCTTCAGGGTCCCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR TCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTGGAAACCAGTACTGTaGGCCTCACCACCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLWKPVL*ASPPRA
Trigger: AGCCCTGGGTGGTGAGGCTCACAGTACTGGTTTCCA...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAAAAGCAGGCCACTTTaGGGTTTTCTTGTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLKSRPL*GFLVPK
Trigger: CTTTGGGACAAGAAAACCCCAAAGTGGCCTGCTTTT...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp AGAACTTTGGTACAATGTACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCAGTCTCCTACTTCAGTTaGCACAGACTGGATAATGAG +
Preference number: 2 (lower is better)
Translates to: RTLVQCTTCGTVRNCLGPVSYFS*HRLDNE
Trigger: CTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGAC...TGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAAAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTGGATAATGAGCTCCTaGGATGGGAAAAGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSWIMSS*DGKSRP
Trigger: TGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCA...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCGCTCTTCATAGAAACTaGCCTCAGTCAAATGCACAA +
Preference number: 2 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLALHRN*PQSNAQ
Trigger: TTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGC...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR CAA 90 bp GAACCTAAACCTGTAAGATGGGTTGCTCCTTTACTCTTACTGCATTaGCTGTATAGTCATGCCTATGATCATAAGGGAGTCCAGAAGCAT +
Preference number: 2 (lower is better)
Translates to: EPKPVRWVAPLLLLH*LYSHAYDHKGVQKH
Trigger: ATGCTTCTGGACTCCCTTATGATCATAGGCATGACTATACAGCAAATGCAGTAAGAGTAAAGGAGCAACCCATCTTACAGGTTTAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR CCA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCATCAGTTGGCACAGACTaGATAATGAGCTCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSSVGTD*IMSSWD
Trigger: ATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGA...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp GATTTTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTTGCAGCACTTCTCATTaGGAGCCCTTTGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: DFKYMCIHCCCQFLSLYSCSTSH*EPFGTG
Trigger: TCCTGTCCCAAAGGGCTCCCAATGAGAAGTGCTGCA...ACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR GCA 90 bp TTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTAAAGCTGGCCTCAGTCAAATaGACAAAGGCTCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LSTCVYTAVASFLAYTVKLASVK*TKALPP
Trigger: AGGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAG...CTTTACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR GCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCCTGGCCTCAGTCAAATaGACAAAGGCTCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLLASVK*TKALPP
Trigger: AGGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAG...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR GCA 90 bp ACATATTGTACCAGTGATGCTATAAATGCAGTCTTTACTGAACCACAGAAGAAAACTCCAAAAGGGTCCTaGTCCAGCCTGGCTTTCAAT +
Preference number: 2 (lower is better)
Translates to: TYCTSDAINAVFTEPQKKTPKGS*SSLAFN
Trigger: ATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGAGT...TTTCTTCTGTGGTTCAGTAAAGACTGCATTTATAGCATCACTGGTACAATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR CCA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGTCTCCTACTTCAGTTaGCACAGACTGGATAATGAG +
Preference number: 2 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSVSYFS*HRLDNE
Trigger: CTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGAC...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CCA 90 bp ACATATTGTACCAGTGATGCTATAAATGCAGTCTTTACTGAACCACAGAAGAAATCATTGGGAGCCCTTTaGGACAGGATACTTGTTGTA +
Preference number: 2 (lower is better)
Translates to: TYCTSDAINAVFTEPQKKSLGAL*DRILVV
Trigger: TACAACAAGTATCCTGTCCCAAAGGGCTCCCAATGA...TTTCTTCTGTGGTTCAGTAAAGACTGCATTTATAGCATCACTGGTACAATATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR TCA 72 bp AGCGCTGCATACAATAGCAGGGGCTTTGGAAGCAACTaGGTCACTACTCCAAAAGGGTCCTGCTCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: SAAYNSRGFGSN*VTTPKGSCSSL
Trigger: CAGGCTGGAGCAGGACCCTTTTGGAGTAGTGACTCAGTTGCTTCCAAAGCCCCTGCTATTGTATGCAGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 72 bp ACTGAGTCACTACTCCAAAAGGGTCCTGCTCCAGCCTaGCTTTCAATGGAAATGGAGGCGCTCCAAGAAAGG +
Preference number: 3 (lower is better)
Translates to: TESLLQKGPAPA*LSMEMEALQER
Trigger: CCTTTCTTGGAGCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGAGTAGTGACTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 72 bp TTTAGCCAGCACTCACAGTCAGTCTCCTACTTCAGTTaGCACAGACTGGATAATGAGCTCCTGGGATGGGAA +
Preference number: 3 (lower is better)
Translates to: FSQHSQSVSYFS*HRLDNELLGWE
Trigger: TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGACTGTGAGTGCTGGCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR CCA 72 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTaGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: STSPQLLALHRN*PQSNAQRLFLL
Trigger: CAGGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR CCA 72 bp CAGCCTTATGCAAAAAGAGCTCGTCAGGAGTTCCCCTaGGAAGAAGAGTACAGGTCAGCGCTGCATACAATA +
Preference number: 3 (lower is better)
Translates to: QPYAKRARQEFP*EEEYRSALHTI
Trigger: TATTGTATGCAGCGCTGACCTGTACTCTTCTTCCCAGGGGAACTCCTGACGAGCTCTTTTTGCATAAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR CAA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCCTCTCCTCAGCTACTaGCTCTTCATAGAAACTGGC +
Preference number: 3 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSPLLSY*LFIETG
Trigger: GCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGG...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR-3UTR CAA 90 bp CTTAGGGACCCTGAAGGAATCATGAGTTTATCACCTTTGAGGATCCTCTGGGACCATGTTGCTATTTGCTaGGTTTTTCATGGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: LRDPEGIMSLSPLRILWDHVAIC*VFHGPW
Trigger: CCAGGGACCATGAAAAACCAAGCAAATAGCAACATG...GTCCCAGAGGATCCTCAAAGGTGATAAACTCATGATTCCTTCAGGGTCCCTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 72 bp GCTTGGACTATGCAGCACTTCTCATTGGGAGCCCTTTaGGACAGGATACTTGTTGTATACCACATACAAACT +
Preference number: 3 (lower is better)
Translates to: AWTMQHFSLGAL*DRILVVYHIQT
Trigger: AGTTTGTATGTGGTATACAACAAGTATCCTGTCCCAAAGGGCTCCCAATGAGAAGTGCTGCATAGTCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 72 bp AAGACATGTAAGCTTGGACTATGCAGCACTTCTCATTaGGAGCCCTTTGGGACAGGATACTTGTTGTATACC +
Preference number: 3 (lower is better)
Translates to: KTCKLGLCSTSH*EPFGTGYLLYT
Trigger: GGTATACAACAAGTATCCTGTCCCAAAGGGCTCCCAATGAGAAGTGCTGCATAGTCCAAGCTTACATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR GCA 72 bp TATGAACTTGTTTATAAGACATGTAAGCTTGGACTATaGAGCACTTCTCATTGGGAGCCCTTTGGGACAGGA +
Preference number: 3 (lower is better)
Translates to: YELVYKTCKLGL*STSHWEPFGTG
Trigger: TCCTGTCCCAAAGGGCTCCCAATGAGAAGTGCTGCATAGTCCAAGCTTACATGTCTTATAAACAAGTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR GCA 72 bp TTGGTACAATGTACTACATGTGGAACAGTCAGGAACTaGCTAGGTCCACAAAGAACCATTTACTCAGATAGT +
Preference number: 3 (lower is better)
Translates to: LVQCTTCGTVRN*LGPQRTIYSDS
Trigger: ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
3UTR CCA 72 bp ACTGTAGAAGAAGCAAAGAGGTCATCTTTACAGGTATaGGCTGATTTCAATAGGGGCCAAACTTTAACAAGG +
Preference number: 3 (lower is better)
Translates to: TVEEAKRSSLQV*ADFNRGQTLTR
Trigger: CCTTGTTAAAGTTTGGCCCCTATTGAAATCAGCCCATACCTGTAAAGATGACCTCTTTGCTTCTTCTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR CAA 90 bp ACATATTGTACCAGTGATGCTATAAATGCAGTCTTTACTGAACCACAGAAGAAAACAATAGCAGGGGCTTaGGAAGCAACTGAGTCACTA +
Preference number: 3 (lower is better)
Translates to: TYCTSDAINAVFTEPQKKTIAGA*EATESL
Trigger: TAGTGACTCAGTTGCTTCCAAAGCCCCTGCTATTGT...TTTCTTCTGTGGTTCAGTAAAGACTGCATTTATAGCATCACTGGTACAATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CCA 72 bp AGATCAGTCCATGTGACTTCCAGAATTTGCCTAGTATaGTTGAACACTCAGCACTTAAATTATGTGGCCATT +
Preference number: 3 (lower is better)
Translates to: RSVHVTSRICLV*LNTQHLNYVAI
Trigger: AATGGCCACATAATTTAAGTGCTGAGTGTTCAACCATACTAGGCAAATTCTGGAAGTCACATGGACTGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR TCA 72 bp ATGGATAAGCTAAAACGTTACATACATACTCTAGGGTaGAACTTATCACTAGGCAGAACTGGGTTTGATGCT +
Preference number: 3 (lower is better)
Translates to: MDKLKRYIHTLG*NLSLGRTGFDA
Trigger: AGCATCAAACCCAGTTCTGCCTAGTGATAAGTTTCACCCTAGAGTATGTATGTAACGTTTTAGCTTATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR TCA 72 bp TGGGGTGTAATAGCACTGATTATCCAGGCAGTGAGATaGCTAATGAGGATCCCTAAGCTATTAATAATCATA +
Preference number: 3 (lower is better)
Translates to: WGVIALIIQAVR*LMRIPKLLIII
Trigger: TATGATTATTAATAGCTTAGGGATCCTCATTAGTCATCTCACTGCCTGGATAATCAGTGCTATTACACCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR CAA 90 bp CATGAAGAGATAGTTCCACAGTGTCTCAGTTCTGAAGAAACTAAGAACAAAGTTGGGACAGGATACTTGTaGTATACCACATACAAACTA +
Preference number: 3 (lower is better)
Translates to: HEEIVPQCLSSEETKNKVGTGYL*YTTYKL
Trigger: TAGTTTGTATGTGGTATACAACAAGTATCCTGTCCC...AACTTTGTTCTTAGTTTCTTCAGAACTGAGACACTGTGGAACTATCTCTTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR-3UTR CAA 90 bp CATGAAGAGATAGTTCCACAGTGTCTCAGTTCTGAAGAAACTAAGAACAAAGTTCTAACATGTTGCTATTaGCTTGGTTTTTCATGGTCC +
Preference number: 3 (lower is better)
Translates to: HEEIVPQCLSSEETKNKVLTCCY*LGFSWS
Trigger: GGACCATGAAAAACCAAGCAAATAGCAACATGTTAG...AACTTTGTTCTTAGTTTCTTCAGAACTGAGACACTGTGGAACTATCTCTTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR TCA 72 bp ATTGAACTGCTTCTGTATTGCAATCGGAAAATTGTCTaGAGGGTACATTACTCGTTATCTCTTTTACAGCTT +
Preference number: 3 (lower is better)
Translates to: IELLLYCNRKIV*RVHYSLSLLQL
Trigger: AAGCTGTAAAAGAGATAACGAGTAATGTACCCTTCAGACAATTTTCCGATTGCAATACAGAAGCAGTTCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR GCA 72 bp ACATCTAAGCTGGATTTTAAGTACATGTGTATACACTaGTGTTGCCAGTTTCTTAGCTTATACAGTAAAGGT +
Preference number: 3 (lower is better)
Translates to: TSKLDFKYMCIH*CCQFLSLYSKG
Trigger: ACCTTTACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAAAATCCAGCTTAGATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR TCA 72 bp TACCACATACAAACTAAGACACTGGTAGTAGCACTCTaGATTGCTATGATAAACCAAAATGCCTTTACATAT +
Preference number: 3 (lower is better)
Translates to: YHIQTKTLVVAL*IAMINQNAFTY
Trigger: ATATGTAAAGGCATTTTGGTTTATCATAGCAATTCAGAGTGCTACTACCAGTGTCTTAGTTTGTATGTGGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp AAAAGAGCTCGTCAGGAGTTCCCCTGGGAAGAAGAGTACAGGTCAGCGCTGCATGACACCAACCACCCCTaGCTGCCTGTAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KRARQEFPWEEEYRSALHDTNHP*LPVRLW
Trigger: CCACAGCCTTACAGGCAGGCAGGGGTGGTTGGTGTC...ATGCAGCGCTGACCTGTACTCTTCTTCCCAGGGGAACTCCTGACGAGCTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTCTGGAACAGGGCTGGTaGGAGCAAGCAAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGLEQGW*EQARSF
Trigger: GAAACTCCTTGCTTGCTCTCACCAGCCCTGTTCCAG...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGTCCCGGGCATGTCCATaGCACTCTGGGAGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: SWHRLDNELLGWEKQATLSRACP*HSGRVV
Trigger: CACAACTCTCCCAGAGTGTCATGGACATGCCCGGGA...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTGCAGTGAGGCAGTACTaGCACTCTTCCTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGAVRQY*HSSSKP
Trigger: TGGCTTTGAGGAAGAGTGGCAGTACTGCCTCACTGC...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTCTGCCTGTAAGGCTGTaGCCACTACACCCACAATCT +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGLPVRL*PLHPQS
Trigger: AGATTGTGGGTGTAGTGGCCACAGCCTTACAGGCAG...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367772.8
CDS-3UTR TCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTAGGTGTCCTCTGTCATaGAGGAAGATAAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGRCPLS*RKIRAS
Trigger: GCTGGCTCTTATCTTCCTTCATGACAGAGGACACCT...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCTGGAACAGGGCTGGTaGGAGCAAGCAAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRLEQGW*EQARSF
Trigger: GAAACTCCTTGCTTGCTCTCACCAGCCCTGTTCCAG...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAATGGAAACCAGTACTGTaGGCCTCACCACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKWKPVL*ASPPRA
Trigger: AGCCCTGGGTGGTGAGGCTCACAGTACTGGTTTCCA...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTCATGAGATAGTAAGGTaGAGAGCGCTGGCCGACATT +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGHEIVR*RALADI
Trigger: AATGTCGGCCAGCGCTCTGCACCTTACTATCTCATG...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTACTCCAAAAGGGTCCTaGTCCAGCCTGGCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGTPKGS*SSLAFN
Trigger: ATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGAGT...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTGGGGTTCTCCAAGATTaGCGAGATCTGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGGVLQD*RDLTVM
Trigger: CATCACAGTCAGATCTCGCCAATCTTGGAGAACCCC...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR CCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTAATGAGCTCCTGGGATaGGAAAAGCAGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGNELLG*EKQATL
Trigger: CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATT...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CACTACTCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAATGGAAATGGAGGCGCTGGATAATGAGCTCCTaGGATGGGAAAAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HYSKRVLLQPGFQWKWRRWIMSS*DGKSRP
Trigger: TGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCA...GCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGAGTAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGCCATCCCTTATGCAGTaGGGCAGTACTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: SWHRLDNELLGWEKQATLPSLMQ*GSTATL
Trigger: AAGAGTGGCAGTACTGCCTCACTGCATAAGGGATGG...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTCTTAGCAAGCAAGGGTaGCGAAGTGTCTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGLSKQG*RSVFKC
Trigger: GCATTTGAAGACACTTCGTCACCCTTGCTTGCTAAG...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGCGCTCAGTGACAAGATaGATGCCATCCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SWHRLDNELLGWEKQATLRSVTR*MPSAST
Trigger: TGTGGAAGCGGATGGCATTCATCTTGTCACTGAGCG...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CTTAGGGACCCTGAAGGAATCATGAGTTTATCACCTTTGAGGATCCTCTGGGACTGGAAACCAGTACTGTaGGCCTCACCACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRDPEGIMSLSPLRILWDWKPVL*ASPPRA
Trigger: AGCCCTGGGTGGTGAGGCTCACAGTACTGGTTTCCA...GTCCCAGAGGATCCTCAAAGGTGATAAACTCATGATTCCTTCAGGGTCCCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCGGAGGCCGAGGGTCTTaGCTCTGGTACCCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLGGRGS*LWYPVG
Trigger: GCCAACAGGGTACCAGAGCCAAGACCCTCGGCCTCC...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGCGTCAGGAGTTCCCCTaGGAAGAAGAGTACAGGTCA +
Preference number: 4 (lower is better)
Translates to: SWHRLDNELLGWEKQATLRQEFP*EEEYRS
Trigger: TGACCTGTACTCTTCTTCCCAGGGGAACTCCTGACG...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAACGCTCAGTGACAAGATaGATGCCATCCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKRSVTR*MPSAST
Trigger: TGTGGAAGCGGATGGCATTCATCTTGTCACTGAGCG...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGTTGGGGCAGTGCGTTTaGAGATCTTGGTTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRLGQCV*RSWFVL
Trigger: GAGAACGAACCAAGATCTTCAAACGCACTGCCCCAA...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAGCAGTGAGGCAGTACTaGCACTCTTCCTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKAVRQY*HSSSKP
Trigger: TGGCTTTGAGGAAGAGTGGCAGTACTGCCTCACTGC...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGCATGAGATAGTAAGGTaGAGAGCGCTGGCCGACATT +
Preference number: 4 (lower is better)
Translates to: SWHRLDNELLGWEKQATLHEIVR*RALADI
Trigger: AATGTCGGCCAGCGCTCTGCACCTTACTATCTCATG...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTAACAGCCACTGGCTCTaGAAACACCAACTGATTAAG +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGNSHWL*KHQLIK
Trigger: CTTAATCAGTTGGTGTTTGCAGAGCCAGTGGCTGTT...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAGCAGGAATAGGCTTCTaGTCCCCTGAGGTAACAGGT +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKAGIGF*SPEVTG
Trigger: ACCTGTTACCTCAGGGGAGCAGAAGCCTATTCCTGC...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAACACCCACAATCTTCTaGGGGCCGGGTTTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNATPTIF*GPGFSY
Trigger: GTAGGAGAAACCCGGCCCCCAGAAGATTGTGGGTGT...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367772.8
CDS-3UTR CCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTACTCCTCAGAAACTCTaGTGTGGCCTGAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGTPQKL*CGLRNF
Trigger: AAAGTTTCTCAGGCCACACCAGAGTTTCTGAGGAGT...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp AAAAGAGCTCGTCAGGAGTTCCCCTGGGAAGAAGAGTACAGGTCAGCGCTGCATACTCTTAACAGCCACTaGCTCTGCAAACACCAACTG +
Preference number: 4 (lower is better)
Translates to: KRARQEFPWEEEYRSALHTLNSH*LCKHQL
Trigger: CAGTTGGTGTTTGCAGAGCCAGTGGCTGTTAAGAGT...ATGCAGCGCTGACCTGTACTCTTCTTCCCAGGGGAACTCCTGACGAGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAGGGATCACCCGTGACTaGAACAGGGCTGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRGITRD*NRAGES
Trigger: GCTCTCACCAGCCCTGTTCCAGTCACGGGTGATCCC...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCGGGATCACCCGTGACTaGAACAGGGCTGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLGITRD*NRAGES
Trigger: GCTCTCACCAGCCCTGTTCCAGTCACGGGTGATCCC...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAATGGAAATGGAGGCGCTCCAAGAAAAGCAGGCCACTTTaGGGTTTTCTTGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SKRVLLQPGFQWKWRRSKKSRPL*GFLVPK
Trigger: CTTTGGGACAAGAAAACCCCAAAGTGGCCTGCTTTT...CTTGGAGCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGTGGATAATGAGCTCCTaGGATGGGAAAAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRWIMSS*DGKSRP
Trigger: TGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCA...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAGGTCCTGCTCCAGCCTaGCTTTCAATGGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKGPAPA*LSMEME
Trigger: CTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACC...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CAA 72 bp GAGTACAGGTCAGCGCTGCATACAATAGCAGGGGCTTaGGAAGCAACTGAGTCACTACTCCAAAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: EYRSALHTIAGA*EATESLLQKGP
Trigger: AGGACCCTTTTGGAGTAGTGACTCAGTTGCTTCCAAAGCCCCTGCTATTGTATGCAGCGCTGACCTGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACGCTCAGTGACAAGATaGATGCCATCCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNARSVTR*MPSAST
Trigger: TGTGGAAGCGGATGGCATTCATCTTGTCACTGAGCG...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGTGTCCTCTGTCATaGAGGAAGATAAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSRCPLS*RKIRAS
Trigger: GCTGGCTCTTATCTTCCTTCATGACAGAGGACACCT...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp GGAGCCCTTTGGGACAGGATACTTGTTGTATACCACATACAAACTAAGACACTGTCCCGGGCATGTCCATaGCACTCTGGGAGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GALWDRILVVYHIQTKTLSRACP*HSGRVV
Trigger: CACAACTCTCCCAGAGTGTCATGGACATGCCCGGGA...CAGTGTCTTAGTTTGTATGTGGTATACAACAAGTATCCTGTCCCAAAGGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTTCCCGGGCATGTCCATaGCACTCTGGGAGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSSRACP*HSGRVV
Trigger: CACAACTCTCCCAGAGTGTCATGGACATGCCCGGGA...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCGAGTGCAAGGTCTGTTaGAAGCTGGAGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSECKVC*KLERTS
Trigger: GGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTC...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAACCTCTGACAAGCAGCTaGCTCTGTCCAGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: SVSYFSWHRLDNELLGWEPLTSS*LCPAEI
Trigger: AATTTCTGCTGGACAGAGTCAGCTGCTTGTCAGAGG...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGAAACCTGTGGCAAGATaGCTTTCTTCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SWHRLDNELLGWEKQATLKPVAR*LSSAAP
Trigger: AGGAGCAGCTGAAGAAAGTCATCTTGCCACAGGTTT...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAAGGCTTCTGCTCCCCTaGGGTAACAGGTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNARLLLP*GNRFCS
Trigger: GCTACAAAACCTGTTACCTCAGGGGAGCAGAAGCCT...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAGCAGTGAGGCAGTACTaGCACTCTTCCTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNAAVRQY*HSSSKP
Trigger: TGGCTTTGAGGAAGAGTGGCAGTACTGCCTCACTGC...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAATGGAAATGGAGGCGCTCCAAGAAACTGAAGCAAATTTaGCATCTTGCAGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: SKRVLLQPGFQWKWRRSKKLKQI*HLAVQR
Trigger: CCGCTGTACTGCAAGATGGCAAATTTGCTTCAGTTT...CTTGGAGCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTGCTATGCAGAGTAATTaGCACAATGGAATCGCTAGT +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGAMQSN*HNGIAS
Trigger: ACTAGCGATTCCATTGTGGCAATTACTCTGCATAGC...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAGCAGGAATAGGCTTCTaGTCCCCTGAGGTAACAGGT +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNAAGIGF*SPEVTG
Trigger: ACCTGTTACCTCAGGGGAGCAGAAGCCTATTCCTGC...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCTGGATAATGAGCTCCTaGGATGGGAAAAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSWIMSS*DGKSRP
Trigger: TGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCA...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAGCCTGGCTTTCAATaGAAATGGAGGCGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNAQPGFQ*KWRRSK
Trigger: CTTGGAGCGCCTCCATTTCCATTGAAAGCCAGGCTG...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCATGCAGCACTTCTCATTaGGAGCCCTTTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNACSTSH*EPFGTG
Trigger: TCCTGTCCCAAAGGGCTCCCAATGAGAAGTGCTGCA...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAAGGTGTCCTCTGTCATaGAGGAAGATAAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNARCPLS*RKIRAS
Trigger: GCTGGCTCTTATCTTCCTTCATGACAGAGGACACCT...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGGGGATTCAGCAAAGTTaGGTGCAAGGTCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRGIQQS*VQGLLK
Trigger: TTTCAACAGACCTTGCACTCAACTTTGCTGAATCCC...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAAACCTGTGGCAAGATaGCTTTCTTCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSKPVAR*LSSAAP
Trigger: AGGAGCAGCTGAAGAAAGTCATCTTGCCACAGGTTT...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCTGTGCTTCTTGCTGTTaGTGGGCGTGCTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: YLLFIETGLSQMHKGSSSCASCC*WACCQK
Trigger: TTTCTGGCAGCACGCCCATCAACAGCAAGAAGCACA...GGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR TCA 90 bp CTTAGGGACCCTGAAGGAATCATGAGTTTATCACCTTTGAGGATCCTCTGGGACGGCAGGAGAATTGCTTaGACTGGGGAGGTAGAGATT +
Preference number: 4 (lower is better)
Translates to: LRDPEGIMSLSPLRILWDGRRIA*TGEVEI
Trigger: AATCTCTACCTCCCCAGTTCAAGCAATTCTCCTGCC...GTCCCAGAGGATCCTCAAAGGTGATAAACTCATGATTCCTTCAGGGTCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp TTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGGACACCAACCACCCCTaGCTGCCTGTAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FFTSRIVLEKAVNSTSPQDTNHP*LPVRLW
Trigger: CCACAGCCTTACAGGCAGGCAGGGGTGGTTGGTGTC...CTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAACCCAGCACAGACCTCTaGAGAAGACAATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SVSYFSWHRLDNELLGWEPSTDL*RRQCFQ
Trigger: TTGGAAACATTGTCTTCTGCAGAGGTCTGTGCTGGG...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGATGTCCATGACACTCTaGGAGAGTTGTGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRMSMTL*ESCEFW
Trigger: CCAGAATTCACAACTCTCCCAGAGTGTCATGGACAT...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAACGCTGGCCGACATTTTaGAATGGGATTCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKRWPTF*NGIQQS
Trigger: ACTTTGCTGAATCCCATTCCAAAATGTCGGCCAGCG...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAACTCTTAACAGCCACTaGCTCTGCAAACACCAACTG +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKTLNSH*LCKHQL
Trigger: CAGTTGGTGTTTGCAGAGCCAGTGGCTGTTAAGAGT...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAGCCCAGCAAAACCTGTaGCAAGATGACTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SVSYFSWHRLDNELLGWEAQQNL*QDDFLQ
Trigger: CTGAAGAAAGTCATCTTGCCACAGGTTTTGCTGGGC...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCTCCCACAACCACCTCTaGTCCAAGCAGAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLSHNHL*SKQRDQ
Trigger: CTGGTCTCTCTGCTTGGACCAGAGGTGGTTGTGGGA...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGAAAAGCAGGCCACTTTaGGGTTTTCTTGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRKSRPL*GFLVPK
Trigger: CTTTGGGACAAGAAAACCCCAAAGTGGCCTGCTTTT...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGTCTCCTACTTCAGTTaGCACAGACTGGATAATGAG +
Preference number: 4 (lower is better)
Translates to: SWHRLDNELLGWEKQATLVSYFS*HRLDNE
Trigger: CTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGAC...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCCCATCCCTTATGCAGTaGGGCAGTACTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLPSLMQ*GSTATL
Trigger: AAGAGTGGCAGTACTGCCTCACTGCATAAGGGATGG...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAGCTGTACTCGCTCAGTaGCAAGATGAATGCCATCCG +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRAVLAQ*QDECHP
Trigger: CGGATGGCATTCATCTTGTCACTGAGCGAGTACAGC...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTCTCTTATTGACTaGATACTCCTCAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: SWHRLDNELLGWEKQATLGSLID*ILLRNS
Trigger: AGAGTTTCTGAGGAGTATTCAGTCAATAAGAGACCC...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGGGGTCTCTTATTGACTaGATACTCCTCAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRGSLID*ILLRNS
Trigger: AGAGTTTCTGAGGAGTATTCAGTCAATAAGAGACCC...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGTGCTGGGTCTCTTATTaGCTGAATACTCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SWHRLDNELLGWEKQATLCWVSY*LNTPQK
Trigger: TTTCTGAGGAGTATTCAGTCAATAAGAGACCCAGCA...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGTTTCTGAAGAAGTCATaGGATAGTAAGGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRFLKKS*DSKVQS
Trigger: GCTCTGCACCTTACTATCTCATGACTTCTTCAGAAA...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAGGCTTCTGCTCCCCTaGGGTAACAGGTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRRLLLP*GNRFCS
Trigger: GCTACAAAACCTGTTACCTCAGGGGAGCAGAAGCCT...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGACTCTTCAGTGAGTaGAAGCAAAGCAGGAATAGG +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKRLFSE*KQSRNR
Trigger: CCTATTCCTGCTTTGCTTTCACTCACTGAAGAGTCT...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAGCCCTTTTTACTTACTaGCGAAACAAACCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SVSYFSWHRLDNELLGWEALFTY*RNKPVW
Trigger: CCACACTGGTTTGTTTCGTCAGTAAGTAAAAAGGGC...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAACAGCCACTGGCTCTaGAAACACCAACTGATTAAG +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKNSHWL*KHQLIK
Trigger: CTTAATCAGTTGGTGTTTGCAGAGCCAGTGGCTGTT...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAGCACTGCTAGGCTATaGAGAGTAATTGCCACAATG +
Preference number: 4 (lower is better)
Translates to: SVSYFSWHRLDNELLGWESTARL*RVIATM
Trigger: CATTGTGGCAATTACTCTGCATAGCCTAGCAGTGCT...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAGAGAGTTGTGAATTCTaGAGACATCTCTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVSYFSWHRLDNELLGWEESCEF*RHLFRR
Trigger: CCTCCTGAAGAGATGTCTCCAGAATTCACAACTCTC...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCGGGATCACCCGTGACTaGAACAGGGCTGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSGITRD*NRAGES
Trigger: GCTCTCACCAGCCCTGTTCCAGTCACGGGTGATCCC...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGGGGTACAAGGCTAATCTTTTaGGGTAAGCTTGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: GTDWIMSSWDGKSRPLWGTRLIF*GKLDFQ
Trigger: TTGGAAATCAAGCTTACCCCAAAAGATTAGCCTTGT...ACCCCAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAAAGCAGGCCACTTTaGGGTTTTCTTGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SVSYFSWHRLDNELLGWEKSRPL*GFLVPK
Trigger: CTTTGGGACAAGAAAACCCCAAAGTGGCCTGCTTTT...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAATCATTGGGAGCCCTTTaGGACAGGATACTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKSLGAL*DRILVV
Trigger: TACAACAAGTATCCTGTCCCAAAGGGCTCCCAATGA...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAACCTCTGCCTGTAGTTTaGGGTGTAATAGCACTGATT +
Preference number: 4 (lower is better)
Translates to: SVSYFSWHRLDNELLGWEPLPVV*GVIALI
Trigger: AATCAGTGCTATTACACCCCAAACTACAGGCAGAGG...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAACTCTGGTGTGGCCTaGGAAACTTTACAAACAGTT +
Preference number: 4 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSNSGVA*ETLQTV
Trigger: AACTGTTTGTAAAGTTTCTCAGGCCACACCAGAGTT...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACGCACATGCTCTTCATaGACTTCAAACAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNARTCSS*TSNNWR
Trigger: TCTCCAGTTGTTTGAAGTTCATGAAGAGCATGTGCG...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCATCAGCTGCTCCTGAGTaGAGTGCTCCACGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSSAAPE*SAPRRP
Trigger: AGGCCTACGTGGAGCACTTCACTCAGGAGCAGCTGA...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTGCTCCTGAGTaGAGTGCTCCACGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSSAAPE*SAPRRP
Trigger: AGGCCTACGTGGAGCACTTCACTCAGGAGCAGCTGA...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAAGACTCTTCAGTGAGTaGAAGCAAAGCAGGAATAGG +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNARLFSE*KQSRNR
Trigger: CCTATTCCTGCTTTGCTTTCACTCACTGAAGAGTCT...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTGGAAACCAGTACTGTaGGCCTCACCACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSWKPVL*ASPPRA
Trigger: AGCCCTGGGTGGTGAGGCTCACAGTACTGGTTTCCA...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAAACTGAAGCAAATTTaGCATCTTGCAGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKKLKQI*HLAVQR
Trigger: CCGCTGTACTGCAAGATGGCAAATTTGCTTCAGTTT...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp AGAACTTTGGTACAATGTACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACATGAGATAGTAAGGTaGAGAGCGCTGGCCGACATT +
Preference number: 4 (lower is better)
Translates to: RTLVQCTTCGTVRNCLGPHEIVR*RALADI
Trigger: AATGTCGGCCAGCGCTCTGCACCTTACTATCTCATG...TGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAAAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGACTGGCCTCAGTCAAATaGACAAAGGCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRLASVK*TKALPP
Trigger: AGGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAG...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGTACATGTGTATACACTaGTGTTGCCAGTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRYMCIH*CCQFLS
Trigger: GCTAAGAAACTGGCAACAGCAGTGTATACACATGTA...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTGAGGCAGGAGAATTaGTTGAACTGGGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSLRQEN*LNWGGR
Trigger: TCTACCTCCCCAGTTCAAGCAATTCTCCTGCCTCAG...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp GATTTTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTGGAGGCCGAGGGTCTTaGCTCTGGTACCCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: DFKYMCIHCCCQFLSLYSGGRGS*LWYPVG
Trigger: GCCAACAGGGTACCAGAGCCAAGACCCTCGGCCTCC...ACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCGCCGACATTTTGGAATaGGATTCAGCAAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSADILE*DSAKLS
Trigger: ACTCAACTTTGCTGAATCCCATTCCAAAATGTCGGC...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTGGGGTTCTCCAAGATTaGCGAGATCTGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSGVLQD*RDLTVM
Trigger: CATCACAGTCAGATCTCGCCAATCTTGGAGAACCCC...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR CCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCATCCAAGGTAGTGCACTaGGACTTGACATCATCACAA +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNASKVVH*DLTSSQ
Trigger: TTGTGATGATGTCAAGTCCCAGTGCACTACCTTGGA...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAGGAAAACTGCATCACTaGGGAGACATCATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKGKLHH*GDIILF
Trigger: AAAAAGGATGATGTCTCCCCAGTGATGCAGTTTTCC...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAATGAGCTCCTGGGATaGGAAAAGCAGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRNELLG*EKQATL
Trigger: CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATT...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCTCAGTTGGCACAGACTaGATAATGAGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: YLLFIETGLSQMHKGSSSSVGTD*IMSSWD
Trigger: ATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGA...GGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAGTCTCCTACTTCAGTTaGCACAGACTGGATAATGAG +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNAVSYFS*HRLDNE
Trigger: CTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGAC...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCGCTCTTCATAGAAACTaGCCTCAGTCAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSALHRN*PQSNAQ
Trigger: TTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGC...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCCATCCCTTATGCAGTaGGGCAGTACTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: FFTSRIVLEKAVNSTSPQPSLMQ*GSTATL
Trigger: AAGAGTGGCAGTACTGCCTCACTGCATAAGGGATGG...CTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAAACTCTGGTGTGGCCTaGGAAACTTTACAAACAGTT +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNANSGVA*ETLQTV
Trigger: AACTGTTTGTAAAGTTTCTCAGGCCACACCAGAGTT...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGGTTCATTTAAGATTGTaGGCAAACTTTCCACCAATG +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRVHLRL*ANFPPM
Trigger: CATTGGTGGAAAGTTTGCTCACAATCTTAAATGAAC...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp GTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTAACTGTAGAGTGCAAGGTCTGTTaGAAGCTGGAGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: VRNCLGPQRTIYSDSLTVECKVC*KLERTS
Trigger: GGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTC...TACAGTTAGACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCATTTCTGAAGAAGTCATaGGATAGTAAGGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNAFLKKS*DSKVQS
Trigger: GCTCTGCACCTTACTATCTCATGACTTCTTCAGAAA...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp GTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTAACTGTACCTCTGACAAGCAGCTaGCTCTGTCCAGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: VRNCLGPQRTIYSDSLTVPLTSS*LCPAEI
Trigger: AATTTCTGCTGGACAGAGTCAGCTGCTTGTCAGAGG...TACAGTTAGACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CCTGAAGGAATCATGAGTTTATCACCTTTGAGGATCCTCTGGGACTCTTACTTACCTCTGACAAGCAGCTaGCTCTGTCCAGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: PEGIMSLSPLRILWDSYLPLTSS*LCPAEI
Trigger: AATTTCTGCTGGACAGAGTCAGCTGCTTGTCAGAGG...TAAGTAAGAGTCCCAGAGGATCCTCAAAGGTGATAAACTCATGATTCCTTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAGCTATCAATTCCTCTaGCAAGCAGCTGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRSYQFL*QAADSV
Trigger: GACAGAGTCAGCTGCTTGTCAGAGGAATTGATAGCT...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCCTGGAACAGGGCTGGTaGGAGCAAGCAAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSLEQGW*EQARSF
Trigger: GAAACTCCTTGCTTGCTCTCACCAGCCCTGTTCCAG...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAAACCTGTGGCAAGATaGCTTTCTTCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRKPVAR*LSSAAP
Trigger: AGGAGCAGCTGAAGAAAGTCATCTTGCCACAGGTTT...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAATACATACTCTAGGGTaGAACTTATCACTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKIHTLG*NLSLGR
Trigger: TCTGCCTAGTGATAAGTTTCACCCTAGAGTATGTAT...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCATAGGGAACAAATCATaGAGAGATAGTTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSIGNKS*RDSSTV
Trigger: CACTGTGGAACTATCTCTTCATGATTTGTTCCCTAT...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp GTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTAACTGTAACACAGCAGGCCTACTaGTACAGACAGACACAGACA +
Preference number: 4 (lower is better)
Translates to: VRNCLGPQRTIYSDSLTVTQQAY*YRQTQT
Trigger: TGTCTGTGTCTGTCTGTATCAGTAGGCCTGCTGTGT...TACAGTTAGACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAACGAAGTGTCTTCAAATaGTTGGCAGCTTTATTAACC +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKRSVFK*LAALLT
Trigger: GGTTAATAAAGCTGCCAAGCATTTGAAGACACTTCG...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp GGCAAATTCTGCCCTTTTTACTTACTGACGAAACAAACCAGTGTGGTTTCCAGCCCCAGCACAGACCTCTaGAGAAGACAATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GKFCPFYLLTKQTSVVSSPSTDL*RRQCFQ
Trigger: TTGGAAACATTGTCTTCTGCAGAGGTCTGTGCTGGG...GCTGGAAACCACACTGGTTTGTTTCGTCAGTAAGTAAAAAGGGCAGAATTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGATGGGGAGGTAGAGATTaGAGTAAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRWGGRD*SKPRSC
Trigger: GCATGATCTTGGCTTACTGCAATCTCTACCTCCCCA...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGACGCTGGCCGACATTTTaGAATGGGATTCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRRWPTF*NGIQQS
Trigger: ACTTTGCTGAATCCCATTCCAAAATGTCGGCCAGCG...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCCCACAACCACCTCTaGTCCAAGCAGAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSSHNHL*SKQRDQ
Trigger: CTGGTCTCTCTGCTTGGACCAGAGGTGGTTGTGGGA...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTAAAGATTAGCCGGGCATGGTaGTACGCGCCTGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LSTCVYTAVASFLAYTVKISRAW*YAPAVP
Trigger: TGGGACTGCAGGCGCGTACCACCATGCCCGGCTAAT...CTTTACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CAA 72 bp AGCTTGGACTATGCAGCACTTCTCATTGGGAGCCCTTaGGGACAGGATACTTGTTGTATACCACATACAAAC +
Preference number: 4 (lower is better)
Translates to: SLDYAALLIGSP*GQDTCCIPHTN
Trigger: GTTTGTATGTGGTATACAACAAGTATCCTGTCCCAAAGGGCTCCCAATGAGAAGTGCTGCATAGTCCAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCGCTGTACTCGCTCAGTaGCAAGATGAATGCCATCCG +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSAVLAQ*QDECHP
Trigger: CGGATGGCATTCATCTTGTCACTGAGCGAGTACAGC...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCTGCTGGGTCTCTTATTaGCTGAATACTCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: YLLFIETGLSQMHKGSSSCWVSY*LNTPQK
Trigger: TTTCTGAGGAGTATTCAGTCAATAAGAGACCCAGCA...GGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTGGGATTCAGCAAAGTTaGGTGCAAGGTCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSGIQQS*VQGLLK
Trigger: TTTCAACAGACCTTGCACTCAACTTTGCTGAATCCC...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCTTTCTGAAGAAGTCATaGGATAGTAAGGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: YLLFIETGLSQMHKGSSSFLKKS*DSKVQS
Trigger: GCTCTGCACCTTACTATCTCATGACTTCTTCAGAAA...GGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGTTGGGGCAGTGCGTTTaGAGATCTTGGTTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: FFTSRIVLEKAVNSTSPQLGQCV*RSWFVL
Trigger: GAGAACGAACCAAGATCTTCAAACGCACTGCCCCAA...CTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTGTGCTTCTTGCTGTTaGTGGGCGTGCTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSCASCC*WACCQK
Trigger: TTTCTGGCAGCACGCCCATCAACAGCAAGAAGCACA...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR TCA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGACTTTTTAGAACTTaGTGGGAAGTTTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKRLFRT*WEVFTV
Trigger: GACAGTGAAAACTTCCCATCAAGTTCTAAAAAGTCT...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCAGGCTTCTGCTCCCCTaGGGTAACAGGTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSRLLLP*GNRFCS
Trigger: GCTACAAAACCTGTTACCTCAGGGGAGCAGAAGCCT...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTAGACTCTTCAGTGAGTaGAAGCAAAGCAGGAATAGG +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSRLFSE*KQSRNR
Trigger: CCTATTCCTGCTTTGCTTTCACTCACTGAAGAGTCT...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCTGCTGCAGCAAATTTTaGGGAAAACTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLCCSKF*GKLHHW
Trigger: CCAGTGATGCAGTTTTCCTCAAAATTTGCTGCAGCA...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCGCTATGCAGAGTAATTaGCACAATGGAATCGCTAGT +
Preference number: 4 (lower is better)
Translates to: YLLFIETGLSQMHKGSSSAMQSN*HNGIAS
Trigger: ACTAGCGATTCCATTGTGGCAATTACTCTGCATAGC...GGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTAGCACTGCTAGGCTATaGAGAGTAATTGCCACAATG +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSSTARL*RVIATM
Trigger: CATTGTGGCAATTACTCTGCATAGCCTAGCAGTGCT...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCGCAGGAATAGGCTTCTaGTCCCCTGAGGTAACAGGT +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSAGIGF*SPEVTG
Trigger: ACCTGTTACCTCAGGGGAGCAGAAGCCTATTCCTGC...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTGGCCTCAGTCAAATaGACAAAGGCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FFTSRIVLEKAVNSTSPQLASVK*TKALPP
Trigger: AGGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAG...CTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCACCTGTAAGATGGGTTaGTCCTTTACTCTTACTGCA +
Preference number: 4 (lower is better)
Translates to: YLLFIETGLSQMHKGSSSTCKMG*SFTLTA
Trigger: TGCAGTAAGAGTAAAGGAGCAACCCATCTTACAGGT...GGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCATCAGAAACTCTGGTGTaGCCTGAGAAACTTTACAAA +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNASETLV*PEKLYK
Trigger: TTTGTAAAGTTTCTCAGGCCACACCAGAGTTTCTGA...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCACTCCTCAGAAACTCTaGTGTGGCCTGAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLTPQKL*CGLRNF
Trigger: AAAGTTTCTCAGGCCACACCAGAGTTTCTGAGGAGT...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAGAGAGTTGTGAATTCTaGAGACATCTCTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRESCEF*RHLFRR
Trigger: CCTCCTGAAGAGATGTCTCCAGAATTCACAACTCTC...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTGAGAGTTGTGAATTCTaGAGACATCTCTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSESCEF*RHLFRR
Trigger: CCTCCTGAAGAGATGTCTCCAGAATTCACAACTCTC...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCATGTCCATGACACTCTaGGAGAGTTGTGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLMSMTL*ESCEFW
Trigger: CCAGAATTCACAACTCTCCCAGAGTGTCATGGACAT...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAATGTCCATGACACTCTaGGAGAGTTGTGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRMSMTL*ESCEFW
Trigger: CCAGAATTCACAACTCTCCCAGAGTGTCATGGACAT...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTAGGTCTGTTGAAAGCTaGAGAGAACATCCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSRSVES*REHPLK
Trigger: TTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCT...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAGGTCTGTTGAAAGCTaGAGAGAACATCCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRRSVES*REHPLK
Trigger: TTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCT...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGATTTTTAGTAAAACTTaGGGCAGTGCGTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRIFSKT*GSAFED
Trigger: ATCTTCAAACGCACTGCCCCAAGTTTTACTAAAAAT...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTTAGCAAGCAAGGGTaGCGAAGTGTCTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: FFTSRIVLEKAVNSTSPQLSKQG*RSVFKC
Trigger: GCATTTGAAGACACTTCGTCACCCTTGCTTGCTAAG...CTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAGTTCATTTAAGATTGTaGGCAAACTTTCCACCAATG +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNAVHLRL*ANFPPM
Trigger: CATTGGTGGAAAGTTTGCTCACAATCTTAAATGAAC...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp AGAACTTTGGTACAATGTACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCAAAACTGAAGCAAATTTaGCATCTTGCAGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: RTLVQCTTCGTVRNCLGPKLKQI*HLAVQR
Trigger: CCGCTGTACTGCAAGATGGCAAATTTGCTTCAGTTT...TGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAAAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAGCCGACATTTTGGAATaGGATTCAGCAAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRADILE*DSAKLS
Trigger: ACTCAACTTTGCTGAATCCCATTCCAAAATGTCGGC...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TTGCATGTAAGCTTTACTCCAGTCCAAAAGGAAGGTTCTTTATATTTAGAATGGTCCCACAACCACCTCTaGTCCAAGCAGAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: LHVSFTPVQKEGSLYLEWSHNHL*SKQRDQ
Trigger: CTGGTCTCTCTGCTTGGACCAGAGGTGGTTGTGGGA...CCATTCTAAATATAAAGAACCTTCCTTTTGGACTGGAGTAAAGCTTACATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAACAAGGCTAATCTTTTaGGGTAAGCTTGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: STSPQLLALHRNWPQSNATRLIF*GKLDFQ
Trigger: TTGGAAATCAAGCTTACCCCAAAAGATTAGCCTTGT...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp AGAACTTTGGTACAATGTACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCAGGAAAACTGCATCACTaGGGAGACATCATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RTLVQCTTCGTVRNCLGPGKLHH*GDIILF
Trigger: AAAAAGGATGATGTCTCCCCAGTGATGCAGTTTTCC...TGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAAAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTACAATGTACTACATGTaGAACAGTCAGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSTMYYM*NSQELP
Trigger: AGGCAGTTCCTGACTGTTCCACATGTAGTACATTGT...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCACAATGTACTACATGTaGAACAGTCAGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLTMYYM*NSQELP
Trigger: AGGCAGTTCCTGACTGTTCCACATGTAGTACATTGT...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GGCAAATTCTGCCCTTTTTACTTACTGACGAAACAAACCAGTGTGGTTTCCAGCTCATCTTTACAGGTATaGGCTGATTTCAATAGGGGC +
Preference number: 4 (lower is better)
Translates to: GKFCPFYLLTKQTSVVSSSSLQV*ADFNRG
Trigger: GCCCCTATTGAAATCAGCCCATACCTGTAAAGATGA...GCTGGAAACCACACTGGTTTGTTTCGTCAGTAAGTAAAAAGGGCAGAATTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp ACATATTGTACCAGTGATGCTATAAATGCAGTCTTTACTGAACCACAGAAGAAAGCTGTACTCGCTCAGTaGCAAGATGAATGCCATCCG +
Preference number: 4 (lower is better)
Translates to: TYCTSDAINAVFTEPQKKAVLAQ*QDECHP
Trigger: CGGATGGCATTCATCTTGTCACTGAGCGAGTACAGC...TTTCTTCTGTGGTTCAGTAAAGACTGCATTTATAGCATCACTGGTACAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp GTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTAACTGTATGCTGGGTCTCTTATTaGCTGAATACTCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VRNCLGPQRTIYSDSLTVCWVSY*LNTPQK
Trigger: TTTCTGAGGAGTATTCAGTCAATAAGAGACCCAGCA...TACAGTTAGACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCAGCTATCAATTCCTCTaGCAAGCAGCTGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSSYQFL*QAADSV
Trigger: GACAGAGTCAGCTGCTTGTCAGAGGAATTGATAGCT...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGTGCTGCAGCAAATTTTaGGGAAAACTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: FFTSRIVLEKAVNSTSPQCCSKF*GKLHHW
Trigger: CCAGTGATGCAGTTTTCCTCAAAATTTGCTGCAGCA...CTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTGGTAGTAGCACTCTaGATTGCTATGATAAACCAA +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSLVVAL*IAMINQ
Trigger: TTGGTTTATCATAGCAATTCAGAGTGCTACTACCAG...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGACCAAAGTGGAACGTGTaGAACAGGAAAAAGGTATTT +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRPKWNV*NRKKVF
Trigger: AAATACCTTTTTCCTGTTTCACACGTTCCACTTTGG...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp GGCAAATTCTGCCCTTTTTACTTACTGACGAAACAAACCAGTGTGGTTTCCAGCCGAAGTGTCTTCAAATaGTTGGCAGCTTTATTAACC +
Preference number: 4 (lower is better)
Translates to: GKFCPFYLLTKQTSVVSSRSVFK*LAALLT
Trigger: GGTTAATAAAGCTGCCAAGCATTTGAAGACACTTCG...GCTGGAAACCACACTGGTTTGTTTCGTCAGTAAGTAAAAAGGGCAGAATTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGACTCCTCAGAAACTCTaGTGTGGCCTGAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: FFTSRIVLEKAVNSTSPQTPQKL*CGLRNF
Trigger: AAAGTTTCTCAGGCCACACCAGAGTTTCTGAGGAGT...CTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCACTCTTAACAGCCACTaGCTCTGCAAACACCAACTG +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSTLNSH*LCKHQL
Trigger: CAGTTGGTGTTTGCAGAGCCAGTGGCTGTTAAGAGT...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGTTGGCACAGACTaGATAATGAGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSSVGTD*IMSSWD
Trigger: ATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGA...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTAACTGTAACAATGTACTACATGTaGAACAGTCAGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: VRNCLGPQRTIYSDSLTVTMYYM*NSQELP
Trigger: AGGCAGTTCCTGACTGTTCCACATGTAGTACATTGT...TACAGTTAGACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTGTTCATTTAAGATTGTaGGCAAACTTTCCACCAATG +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSVHLRL*ANFPPM
Trigger: CATTGGTGGAAAGTTTGCTCACAATCTTAAATGAAC...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCGAGTGCAAGGTCTGTTaGAAGCTGGAGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLECKVC*KLERTS
Trigger: GGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTC...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCACGCACATGCTCTTCATaGACTTCAAACAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSRTCSS*TSNNWR
Trigger: TCTCCAGTTGTTTGAAGTTCATGAAGAGCATGTGCG...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTTGGGGCAGTGCGTTTaGAGATCTTGGTTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLLGQCV*RSWFVL
Trigger: GAGAACGAACCAAGATCTTCAAACGCACTGCCCCAA...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTAGACTTTTTAGAACTTaGTGGGAAGTTTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSRLFRT*WEVFTV
Trigger: GACAGTGAAAACTTCCCATCAAGTTCTAAAAAGTCT...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp GGCAAATTCTGCCCTTTTTACTTACTGACGAAACAAACCAGTGTGGTTTCCAGCAGACTTTTTAGAACTTaGTGGGAAGTTTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: GKFCPFYLLTKQTSVVSSRLFRT*WEVFTV
Trigger: GACAGTGAAAACTTCCCATCAAGTTCTAAAAAGTCT...GCTGGAAACCACACTGGTTTGTTTCGTCAGTAAGTAAAAAGGGCAGAATTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp ACATATTGTACCAGTGATGCTATAAATGCAGTCTTTACTGAACCACAGAAGAAAGGCTTTGGAAGCAACTaGGTCACTACTCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: TYCTSDAINAVFTEPQKKGFGSN*VTTPKG
Trigger: CCCTTTTGGAGTAGTGACTCAGTTGCTTCCAAAGCC...TTTCTTCTGTGGTTCAGTAAAGACTGCATTTATAGCATCACTGGTACAATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAATCGGAAAATTGTCTaGAGGGTACATTACTCGTTA +
Preference number: 4 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRNRKIV*RVHYSL
Trigger: TAACGAGTAATGTACCCTTCAGACAATTTTCCGATT...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCAGCACTGCTAGGCTATaGAGAGTAATTGCCACAATG +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSSTARL*RVIATM
Trigger: CATTGTGGCAATTACTCTGCATAGCCTAGCAGTGCT...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTGTAAGCTTGGACTATaGAGCACTTCTCATTGGGAG +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSCKLGL*STSHWE
Trigger: CTCCCAATGAGAAGTGCTGCATAGTCCAAGCTTACA...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAAGGTCTGTTGAAAGCTaGAGAGAACATCCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSRSVES*REHPLK
Trigger: TTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCT...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCATCCAAGGTAGTGCACTaGGACTTGACATCATCACAA +
Preference number: 4 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSSKVVH*DLTSSQ
Trigger: TTGTGATGATGTCAAGTCCCAGTGCACTACCTTGGA...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GGCAAATTCTGCCCTTTTTACTTACTGACGAAACAAACCAGTGTGGTTTCCAGCACAAGGCTAATCTTTTaGGGTAAGCTTGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: GKFCPFYLLTKQTSVVSSTRLIF*GKLDFQ
Trigger: TTGGAAATCAAGCTTACCCCAAAAGATTAGCCTTGT...GCTGGAAACCACACTGGTTTGTTTCGTCAGTAAGTAAAAAGGGCAGAATTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCATGTCTATGCATACTTaGGAACTTAGTGTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: YYMWNSQELPRSTKNHLLMSMHT*ELSVRK
Trigger: TTTCCTCACACTAAGTTCCCAAGTATGCATAGACAT...GAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCAGCTATCAATTCCTCTaGCAAGCAGCTGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLSYQFL*QAADSV
Trigger: GACAGAGTCAGCTGCTTGTCAGAGGAATTGATAGCT...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCATGTATGTTGACAGTTTaGTTTTCAGGCTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSCMLTV*FSGSSG
Trigger: ACCTGAGGAGCCTGAAAATCAAACTGTCAACATACA...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCATCCAGGCAGTGAGATaGCTAATGAGGATCCCTAAG +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLIQAVR*LMRIPK
Trigger: CTTAGGGATCCTCATTAGTCATCTCACTGCCTGGAT...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp CCTGAAGGAATCATGAGTTTATCACCTTTGAGGATCCTCTGGGACTCTTACTTACTTTTACTAAGCAATTaGGGCCACAGAAGTAAAACA +
Preference number: 4 (lower is better)
Translates to: PEGIMSLSPLRILWDSYLLLLSN*GHRSKT
Trigger: TGTTTTACTTCTGTGGCCTCAATTGCTTAGTAAAAG...TAAGTAAGAGTCCCAGAGGATCCTCAAAGGTGATAAACTCATGATTCCTTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCCCCAGCACAGACCTCTaGAGAAGACAATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLPSTDL*RRQCFQ
Trigger: TTGGAAACATTGTCTTCTGCAGAGGTCTGTGCTGGG...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCGCCGACATTTTGGAATaGGATTCAGCAAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSADILE*DSAKLS
Trigger: ACTCAACTTTGCTGAATCCCATTCCAAAATGTCGGC...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp GATTTTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTGCCCAGCAAAACCTGTaGCAAGATGACTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: DFKYMCIHCCCQFLSLYSAQQNL*QDDFLQ
Trigger: CTGAAGAAAGTCATCTTGCCACAGGTTTTGCTGGGC...ACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCGGAAAACTGCATCACTaGGGAGACATCATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSGKLHH*GDIILF
Trigger: AAAAAGGATGATGTCTCCCCAGTGATGCAGTTTTCC...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp CATGAAGAGATAGTTCCACAGTGTCTCAGTTCTGAAGAAACTAAGAACAAAGTTGTCTCCTACTTCAGTTaGCACAGACTGGATAATGAG +
Preference number: 4 (lower is better)
Translates to: HEEIVPQCLSSEETKNKVVSYFS*HRLDNE
Trigger: CTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGAC...AACTTTGTTCTTAGTTTCTTCAGAACTGAGACACTGTGGAACTATCTCTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp GGAGCCCTTTGGGACAGGATACTTGTTGTATACCACATACAAACTAAGACACTGAAGTTGTATCCTTTCTaGAGAAGGTACTTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: GALWDRILVVYHIQTKTLKLYPF*RRYFLY
Trigger: GTAAAGAAAGTACCTTCTCCAGAAAGGATACAACTT...CAGTGTCTTAGTTTGTATGTGGTATACAACAAGTATCCTGTCCCAAAGGGCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCGGGATTCAGCAAAGTTaGGTGCAAGGTCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLGIQQS*VQGLLK
Trigger: TTTCAACAGACCTTGCACTCAACTTTGCTGAATCCC...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp GATTTTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTCGCACATGCTCTTCATaGACTTCAAACAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: DFKYMCIHCCCQFLSLYSRTCSS*TSNNWR
Trigger: TCTCCAGTTGTTTGAAGTTCATGAAGAGCATGTGCG...ACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTGCTGCAGCAAATTTTaGGGAAAACTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLCCSKF*GKLHHW
Trigger: CCAGTGATGCAGTTTTCCTCAAAATTTGCTGCAGCA...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCACGAAGTGTCTTCAAATaGTTGGCAGCTTTATTAACC +
Preference number: 4 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSRSVFK*LAALLT
Trigger: GGTTAATAAAGCTGCCAAGCATTTGAAGACACTTCG...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCAACAGCCACTGGCTCTaGAAACACCAACTGATTAAG +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLNSHWL*KHQLIK
Trigger: CTTAATCAGTTGGTGTTTGCAGAGCCAGTGGCTGTT...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp CCTGAAGGAATCATGAGTTTATCACCTTTGAGGATCCTCTGGGACTCTTACTTAAGTAGCACTCTGAATTaGTATGATAAACCAAAATGC +
Preference number: 4 (lower is better)
Translates to: PEGIMSLSPLRILWDSYLSSTLN*YDKPKC
Trigger: GCATTTTGGTTTATCATAGCAATTCAGAGTGCTACT...TAAGTAAGAGTCCCAGAGGATCCTCAAAGGTGATAAACTCATGATTCCTTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR GCA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCGTGACTTCCAGAATTTaGCTAGTATGGTTGAACACT +
Preference number: 4 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSVTSRI*LVWLNT
Trigger: AGTGTTCAACCATACTAGGCAAATTCTGGAAGTCAC...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp GTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTAACTGTAATTTTTAGTAAAACTTaGGGCAGTGCGTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VRNCLGPQRTIYSDSLTVIFSKT*GSAFED
Trigger: ATCTTCAAACGCACTGCCCCAAGTTTTACTAAAAAT...TACAGTTAGACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp TTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTAAAGTCCAAGGTAGTGCACTaGGACTTGACATCATCACAA +
Preference number: 4 (lower is better)
Translates to: LSTCVYTAVASFLAYTVKSKVVH*DLTSSQ
Trigger: TTGTGATGATGTCAAGTCCCAGTGCACTACCTTGGA...CTTTACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCACCTAAACCTGTAAGATaGGTTGCTCCTTTACTCTTA +
Preference number: 4 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSPKPVR*VAPLLL
Trigger: TAAGAGTAAAGGAGCAACCCATCTTACAGGTTTAGG...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR TCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCAACTCTGGTGTGGCCTaGGAAACTTTACAAACAGTT +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLNSGVA*ETLQTV
Trigger: AACTGTTTGTAAAGTTTCTCAGGCCACACCAGAGTT...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR TCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTGTATGTTGACAGTTTaGTTTTCAGGCTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLCMLTV*FSGSSG
Trigger: ACCTGAGGAGCCTGAAAATCAAACTGTCAACATACA...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR GCA 90 bp TTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTAAAGGCTATGCAGAGTAATTaGCACAATGGAATCGCTAGT +
Preference number: 4 (lower is better)
Translates to: LSTCVYTAVASFLAYTVKAMQSN*HNGIAS
Trigger: ACTAGCGATTCCATTGTGGCAATTACTCTGCATAGC...CTTTACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CCA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCGCTCTTCATAGAAACTaGCCTCAGTCAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLALHRN*PQSNAQ
Trigger: TTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGC...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CCA 90 bp ACATATTGTACCAGTGATGCTATAAATGCAGTCTTTACTGAACCACAGAAGAAAGCTCTTCATAGAAACTaGCCTCAGTCAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: TYCTSDAINAVFTEPQKKALHRN*PQSNAQ
Trigger: TTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGC...TTTCTTCTGTGGTTCAGTAAAGACTGCATTTATAGCATCACTGGTACAATATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
3UTR CAA 72 bp CACAGTGTCTCAGTTCTGAAGAAACTAAGAACAAAGTaGTATCCTTTCTGGAGAAGGTACTTTCTTTACATG +
Preference number: 4 (lower is better)
Translates to: HSVSVLKKLRTK*YPFWRRYFLYM
Trigger: CATGTAAAGAAAGTACCTTCTCCAGAAAGGATACAACTTTGTTCTTAGTTTCTTCAGAACTGAGACACTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS CCA 90 bp CCCCTGCCTGCCTGTAAGGCTGTGGCCACTACACCCACAATCTTCTaGGGGCCGGGTTTCTCCTACACCATAGAGACGGGTCCGGAAACG +
Preference number: 5 (lower is better)
Translates to: PLPACKAVATTPTIF*GPGFSYTIETGPET
Trigger: CGTTTCCGGACCCGTCTCTATGGTGTAGGAGAAACCCGGCCCCCAGAAGATTGTGGGTGTAGTGGCCACAGCCTTACAGGCAGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367772.8
CDS TCA 90 bp TCAAAGCCAAGCAGATCAGGAACCGAGGTAGAGAGGCCGCACAGCTaGGTCTCAGGCCGGTGCCATCTTAAGTGTGGGCGCCGCGACGAT +
Preference number: 5 (lower is better)
Translates to: SKPSRSGTEVERPHS*VSGRCHLKCGRRDD
Trigger: ATCGTCGCGGCGCCCACACTTAAGATGGCACCGGCCTGAGACTCAGCTGTGCGGCCTCTCTACCTCGGTTCCTGATCTGCTTGGCTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423670.1
CDS GCA 90 bp GCCATCTTAAGTGTGGGCGCCGCGACGATACCGAGTTTCACTCACTaGCCCAGTGGTCTAGTTAGTCCACGAAGATGCCCCCTTTCTAGA +
Preference number: 5 (lower is better)
Translates to: AILSVGAATIPSFTH*PSGLVSPRRCPLSR
Trigger: TCTAGAAAGGGGGCATCTTCGTGGACTAACTAGACCACTGGGGCAGTGAGTGAAACTCGGTATCGTCGCGGCGCCCACACTTAAGATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423670.1
CDS-3UTR CAA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGGAGGCCGAGGGTCTaGGCTCTGGTACCCTGTTGG +
Preference number: 5 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKRRPRV*ALVPCW
Trigger: CCAACAGGGTACCAGAGCCAAGACCCTCGGCCTCCT...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367771.11
ENST00000367772.8
CDS GCA 90 bp AAAGCACTGTTCTCTGATCCCATCCCTTATGCAGTGAGGCAGTACTaGCACTCTTCCTCAAAGCCAAGCAGATCTGCAGGAAGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: KALFSDPIPYAVRQY*HSSSKPSRSAGRRR
Trigger: CCGCCGCCTTCCTGCAGATCTGCTTGGCTTTGAGGAAGAGTGGCAGTACTGCCTCACTGCATAAGGGATGGGATCAGAGAACAGTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367771.11
ENST00000367772.8
ENST00000470238.1
CDS GCA 90 bp ACAACCACCTCTGGTCCAAGCAGAGAGACCAGCACTGCTAGGCTATaGAGAGTAATTGCCACAATGGAATCGCTAGTATCACGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TTTSGPSRETSTARL*RVIATMESLVSRRP
Trigger: GGGCCTGCGTGATACTAGCGATTCCATTGTGGCAATTACTCTGCATAGCCTAGCAGTGCTGGTCTCTCTGCTTGGACCAGAGGTGGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS-3UTR CAA 90 bp CACTACTCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAATGGAAATGGAGGCGCCTTGGGGCAGTGCGTTaGAAGATCTTGGTTCGTTCT +
Preference number: 5 (lower is better)
Translates to: HYSKRVLLQPGFQWKWRRLGAVR*KILVRS
Trigger: AGAACGAACCAAGATCTTCAAACGCACTGCCCCAAG...GCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGAGTAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS GCA 90 bp AAAGCACTGTTCTCTGATCCCATCCCTTATGCAGTGAGGCAGTACTaGCACTCTTCCTCAAAGCCAAGCAGATCAGGAACCGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: KALFSDPIPYAVRQY*HSSSKPSRSGTEVE
Trigger: CTCTACCTCGGTTCCTGATCTGCTTGGCTTTGAGGAAGAGTGGCAGTACTGCCTCACTGCATAAGGGATGGGATCAGAGAACAGTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423670.1
CDS-3UTR CAA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAGCGCTGGCCGACATTTaGGAATGGGATTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKALADI*EWDSAK
Trigger: CTTTGCTGAATCCCATTCCAAAATGTCGGCCAGCGC...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGCTTGTGATGACACTTTaGGCGGCTCGATTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: SWHRLDNELLGWEKQATLLVMTL*AARFGL
Trigger: CAGACCAAATCGAGCCGCCAAAAGTGTCATCACAAG...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGCCTCTCCTCAGCTACTaGCTCTTCATAGAAACTGGC +
Preference number: 5 (lower is better)
Translates to: SWHRLDNELLGWEKQATLPLLSY*LFIETG
Trigger: GCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGG...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAATGGAAATGGAGGCGCTCCAAGCATGTTGCTATTTGCTaGGTTTTTCATGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SKRVLLQPGFQWKWRRSKHVAIC*VFHGPW
Trigger: CCAGGGACCATGAAAAACCAAGCAAATAGCAACATG...CTTGGAGCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGAGGCAGGAGAATTGCTaGAACTGGGGAGGTAGAGAT +
Preference number: 5 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRRQENC*NWGGRD
Trigger: ATCTCTACCTCCCCAGTTCAAGCAATTCTCCTGCCT...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAGTGCGTTTGAAGATCTaGGTTCGTTCTCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: SVSYFSWHRLDNELLGWEVRLKI*VRSPPT
Trigger: TGTGGGAGGAGAACGAACCAAGATCTTCAAACGCAC...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCGTGCGTTTGAAGATCTaGGTTCGTTCTCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSVRLKI*VRSPPT
Trigger: TGTGGGAGGAGAACGAACCAAGATCTTCAAACGCAC...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGGTAGTGCACTGGGACTaGACATCATCACAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRVVHWD*TSSQGS
Trigger: AGAACCTTGTGATGATGTCAAGTCCCAGTGCACTAC...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAACTTGTGATGACACTTTaGGCGGCTCGATTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKLVMTL*AARFGL
Trigger: CAGACCAAATCGAGCCGCCAAAAGTGTCATCACAAG...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp CACTACTCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAATGGAAATGGAGGCGCATAAGACATGTAAGCTaGGACTATGCAGCACTTCTC +
Preference number: 5 (lower is better)
Translates to: HYSKRVLLQPGFQWKWRRIRHVS*DYAALL
Trigger: GAGAAGTGCTGCATAGTCCAAGCTTACATGTCTTAT...GCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGAGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp CAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAGAAGAGGCACCAACCTaGAAGCTATCAATTCCTCTG +
Preference number: 5 (lower is better)
Translates to: QSPTSVGTDWIMSSWDGKEEAPT*KLSIPL
Trigger: CAGAGGAATTGATAGCTTCAAGGTTGGTGCCTCTTC...TTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACTTGGGGCAGTGCGTTaGAAGATCTTGGTTCGTTCT +
Preference number: 5 (lower is better)
Translates to: STSPQLLALHRNWPQSNALGAVR*KILVRS
Trigger: AGAACGAACCAAGATCTTCAAACGCACTGCCCCAAG...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGACGCTGTATGTGCTTCTaGCTGTTGATGGGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRRCMCF*LLMGVL
Trigger: CAGCACGCCCATCAACAGCAAGAAGCACATACAGCG...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR CAA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACCTCTCCTCAGCTACTaGCTCTTCATAGAAACTGGC +
Preference number: 5 (lower is better)
Translates to: STSPQLLALHRNWPQSNAPLLSY*LFIETG
Trigger: GCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGG...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS TCA 90 bp TATAGCTCTTTAAAGCACTGTTCTCTGATCCCATCCCTTATGCAGTaGGGCAGTACTGCCACTCTTCCTCAAAGCCAAGCAGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: YSSLKHCSLIPSLMQ*GSTATLPQSQADLQ
Trigger: CTGCAGATCTGCTTGGCTTTGAGGAAGAGTGGCAGTACTGCCTCACTGCATAAGGGATGGGATCAGAGAACAGTGCTTTAAAGAGCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367771.11
ENST00000367772.8
ENST00000470238.1
CDS TCA 90 bp CTTTCCACCAATGTTCCAAATGAAAAGGCATCCCGGGCATGTCCATaGCACTCTGGGAGAGTTGTGAATTCTGGAGACATCTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSTNVPNEKASRACP*HSGRVVNSGDISSG
Trigger: TCCTGAAGAGATGTCTCCAGAATTCACAACTCTCCCAGAGTGTCATGGACATGCCCGGGATGCCTTTTCATTTGGAACATTGGTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS GCA 90 bp GAACATCCGCTGAAACTGAAATCCAGAGCTACAGTTAGTTTCCAATaGCTTCTCCCTCTTTTCAGGACCTCTATAGCTGGAGACTGCCGA +
Preference number: 5 (lower is better)
Translates to: EHPLKLKSRATVSFQ*LLPLFRTSIAGDCR
Trigger: TCGGCAGTCTCCAGCTATAGAGGTCCTGAAAAGAGGGAGAAGGCATTGGAAACTAACTGTAGCTCTGGATTTCAGTTTCAGCGGATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470238.1
CDS CCA 90 bp AGTCATGAGATAGTAAGGTGCAGAGCGCTGGCCGACATTTTGGAATaGGATTCAGCAAAGTTGAGTGCAAGGTCTGTTGAAAGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SHEIVRCRALADILE*DSAKLSARSVESWR
Trigger: TCTCCAGCTTTCAACAGACCTTGCACTCAACTTTGCTGAATCCCATTCCAAAATGTCGGCCAGCGCTCTGCACCTTACTATCTCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS CCA 90 bp TCGCAGTCATCCCAAGATGACTCTTCCACATCCAAGGTAGTGCACTaGGACTTGACATCATCACAAGGTTCTCTAGGCCAAATCTGTATG +
Preference number: 5 (lower is better)
Translates to: SQSSQDDSSTSKVVH*DLTSSQGSLGQICM
Trigger: CATACAGATTTGGCCTAGAGAACCTTGTGATGATGTCAAGTCCCAGTGCACTACCTTGGATGTGGAAGAGTCATCTTGGGATGACTGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS-3UTR CAA 90 bp CCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGAAAACTGAAGCAAATTaGCCATCTTGCAGTACAGCG +
Preference number: 5 (lower is better)
Translates to: PTSVGTDWIMSSWDGKSRKTEAN*PSCSTA
Trigger: CGCTGTACTGCAAGATGGCAAATTTGCTTCAGTTTT...CCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp AGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCAGGCCACTTTGATGCTGGGTCTCTTATaGACTGAATACTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SWHRLDNELLGWEKQATLMLGLL*TEYSSE
Trigger: TTCTGAGGAGTATTCAGTCAATAAGAGACCCAGCAT...CAAAGTGGCCTGCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCTGGGATTCAGCAAAGTaGAGTGCAAGGTCTGTTGAA +
Preference number: 5 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSWDSAK*SARSVE
Trigger: TTCAACAGACCTTGCACTCAACTTTGCTGAATCCCA...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCAGAAGAGGCACCAACCTaGAAGCTATCAATTCCTCTG +
Preference number: 5 (lower is better)
Translates to: STSPQLLALHRNWPQSNAEEAPT*KLSIPL
Trigger: CAGAGGAATTGATAGCTTCAAGGTTGGTGCCTCTTC...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGAATGTGCTTCTTGCTGTaGATGGGCGTGCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRMCFLL*MGVLPE
Trigger: TTCTGGCAGCACGCCCATCAACAGCAAGAAGCACAT...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR CAA 90 bp CCTGAAGGAATCATGAGTTTATCACCTTTGAGGATCCTCTGGGACTCTTACTTAATGCAGCACTTCTCATaGGGAGCCCTTTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: PEGIMSLSPLRILWDSYLMQHFS*GALWDR
Trigger: CCTGTCCCAAAGGGCTCCCAATGAGAAGTGCTGCAT...TAAGTAAGAGTCCCAGAGGATCCTCAAAGGTGATAAACTCATGATTCCTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp TCAGTCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAATGAGTTTATCACCTTaGAGGATCCTCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: SVSYFSWHRLDNELLGWEMSLSP*RILWDS
Trigger: AGAGTCCCAGAGGATCCTCAAAGGTGATAAACTCAT...TTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp TCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAATGGAAATGGAGGCGCTCCAAGATTGCAATCGGAAAATaGTCTGAAGGGTACATTACT +
Preference number: 5 (lower is better)
Translates to: SKRVLLQPGFQWKWRRSKIAIGK*SEGYIT
Trigger: AGTAATGTACCCTTCAGACAATTTTCCGATTGCAAT...CTTGGAGCGCCTCCATTTCCATTGAAAGCCAGGCTGGAGCAGGACCCTTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS TCA 90 bp GTTTCCAAAGCCACTTCCAGGGGCTGTACTCGCTCAGTGACAAGATaGATGCCATCCGCTTCCACAGTACAAGATAAAAATCTTAGCAAG +
Preference number: 5 (lower is better)
Translates to: VSKATSRGCTRSVTR*MPSASTVQDKNLSK
Trigger: CTTGCTAAGATTTTTATCTTGTACTGTGGAAGCGGATGGCATTCATCTTGTCACTGAGCGAGTACAGCCCCTGGAAGTGGCTTTGGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS TCA 90 bp ACATCATCACAAGGTTCTCTAGGCCAAATCTGTATGTTGACAGTTTaGTTTTCAGGCTCCTCAGGTTCACTCCAGTCAGGCCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: TSSQGSLGQICMLTV*FSGSSGSLQSGHSS
Trigger: TGAGGAGTGGCCTGACTGGAGTGAACCTGAGGAGCCTGAAAATCAAACTGTCAACATACAGATTTGGCCTAGAGAACCTTGTGATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS TCA 90 bp TATAGCTCTTTAAAGCACTGTTCTCTGATCCCATCCCTTATGCAGTaGGGCAGTACTGCCACTCTTCCTCAAAGCCAAGCAGATCAGGAA +
Preference number: 5 (lower is better)
Translates to: YSSLKHCSLIPSLMQ*GSTATLPQSQADQE
Trigger: TTCCTGATCTGCTTGGCTTTGAGGAAGAGTGGCAGTACTGCCTCACTGCATAAGGGATGGGATCAGAGAACAGTGCTTTAAAGAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423670.1
CDS-3UTR CAA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCAGGAGGCCGAGGGTCTaGGCTCTGGTACCCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLRRPRV*ALVPCW
Trigger: CCAACAGGGTACCAGAGCCAAGACCCTCGGCCTCCT...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TCGACCTCTCCTCAGCTACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCATGGGATTCAGCAAAGTaGAGTGCAAGGTCTGTTGAA +
Preference number: 5 (lower is better)
Translates to: STSPQLLALHRNWPQSNAWDSAK*SARSVE
Trigger: TTCAACAGACCTTGCACTCAACTTTGCTGAATCCCA...TGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCGAAGAGGCACCAACCTaGAAGCTATCAATTCCTCTG +
Preference number: 5 (lower is better)
Translates to: YLLFIETGLSQMHKGSSSEEAPT*KLSIPL
Trigger: CAGAGGAATTGATAGCTTCAAGGTTGGTGCCTCTTC...GGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTAGGGGTTCTCCAAGATaGGCGAGATCTGACTGTGAT +
Preference number: 5 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSRGSPR*ARSDCD
Trigger: ATCACAGTCAGATCTCGCCAATCTTGGAGAACCCCT...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR CAA 90 bp TACTTGCTCTTCATAGAAACTGGCCTCAGTCAAATGCACAAAGGCTCTTCCTCCGTAGTGCACTGGGACTaGACATCATCACAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: YLLFIETGLSQMHKGSSSVVHWD*TSSQGS
Trigger: AGAACCTTGTGATGATGTCAAGTCCCAGTGCACTAC...GGAGGAAGAGCCTTTGTGCATTTGACTGAGGCCAGTTTCTATGAAGAGCAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TGTGGAACAGTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTTGTGATGACACTTTaGGCGGCTCGATTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: CGTVRNCLGPQRTIYSDSLVMTL*AARFGL
Trigger: CAGACCAAATCGAGCCGCCAAAAGTGTCATCACAAG...ACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGACTGTTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS TCA 90 bp TTCTGGAGACATCTCTTCAGGAGGGATAGATGCTGGGTCTCTTATTaGCTGAATACTCCTCAGAAACTCTGGTGTGGCCTGAGAAACTTT +
Preference number: 5 (lower is better)
Translates to: FWRHLFRRDRCWVSY*LNTPQKLWCGLRNF
Trigger: AAAGTTTCTCAGGCCACACCAGAGTTTCTGAGGAGTATTCAGTCAATAAGAGACCCAGCATCTATCCCTCCTGAAGAGATGTCTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS TCA 90 bp CGACATTTTGGAATGGGATTCAGCAAAGTTGAGTGCAAGGTCTGTTaGAAGCTGGAGAGAACATCCGCTGAAACTGAAATCCAGAGCTAC +
Preference number: 5 (lower is better)
Translates to: RHFGMGFSKVECKVC*KLERTSAETEIQSY
Trigger: GTAGCTCTGGATTTCAGTTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTCAACTTTGCTGAATCCCATTCCAAAATGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470238.1
CDS CCA 90 bp AAAGAAACATTTAGGGAATATGCTAGAGAAGGGGTTCTCCAAGATTaGCGAGATCTGACTGTGATGGCTGCAGACGACACACATAGGAGA +
Preference number: 5 (lower is better)
Translates to: KETFREYAREGVLQD*RDLTVMAADDTHRR
Trigger: TCTCCTATGTGTGTCGTCTGCAGCCATCACAGTCAGATCTCGCCAATCTTGGAGAACCCCTTCTCTAGCATATTCCCTAAATGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR CAA 90 bp GTCAGGAACTGCCTAGGTCCACAAAGAACCATTTACTCAGATAGTCTAACTGTACTTGGGGCAGTGCGTTaGAAGATCTTGGTTCGTTCT +
Preference number: 5 (lower is better)
Translates to: VRNCLGPQRTIYSDSLTVLGAVR*KILVRS
Trigger: AGAACGAACCAAGATCTTCAAACGCACTGCCCCAAG...TACAGTTAGACTATCTGAGTAAATGGTTCTTTGTGGACCTAGGCAGTTCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCACGCTGTATGTGCTTCTaGCTGTTGATGGGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSRCMCF*LLMGVL
Trigger: CAGCACGCCCATCAACAGCAAGAAGCACATACAGCG...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR CAA 90 bp TCTCCTACTTCAGTTGGCACAGACTGGATAATGAGCTCCTGGGATGGGAAAAGCGGGACAGGATACTTGTaGTATACCACATACAAACTA +
Preference number: 5 (lower is better)
Translates to: SPTSVGTDWIMSSWDGKSGTGYL*YTTYKL
Trigger: TAGTTTGTATGTGGTATACAACAAGTATCCTGTCCC...GCTTTTCCCATCCCAGGAGCTCATTATCCAGTCTGTGCCAACTGAAGTAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp CCTGAAGGAATCATGAGTTTATCACCTTTGAGGATCCTCTGGGACTCTTACTTACTCATTGGGAGCCCTTaGGGACAGGATACTTGTTGT +
Preference number: 5 (lower is better)
Translates to: PEGIMSLSPLRILWDSYLLIGSP*GQDTCC
Trigger: ACAACAAGTATCCTGTCCCAAAGGGCTCCCAATGAG...TAAGTAAGAGTCCCAGAGGATCCTCAAAGGTGATAAACTCATGATTCCTTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS CCA 90 bp TTGGAATGGGATTCAGCAAAGTTGAGTGCAAGGTCTGTTGAAAGCTaGAGAGAACATCCGCTGAAACTGAAATCCAGAGCTACAGTTAGT +
Preference number: 5 (lower is better)
Translates to: LEWDSAKLSARSVES*REHPLKLKSRATVS
Trigger: ACTAACTGTAGCTCTGGATTTCAGTTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTCAACTTTGCTGAATCCCATTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470238.1
CDS-3UTR CAA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAATGTGCTTCTTGCTGTaGATGGGCGTGCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSMCFLL*MGVLPE
Trigger: TTCTGGCAGCACGCCCATCAACAGCAAGAAGCACAT...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR CAA 90 bp AGAACTTTGGTACAATGTACTACATGTGGAACAGTCAGGAACTGCCTAGGTCCATGTGACTTCCAGAATTaGCCTAGTATGGTTGAACAC +
Preference number: 5 (lower is better)
Translates to: RTLVQCTTCGTVRNCLGPCDFQN*PSMVEH
Trigger: GTGTTCAACCATACTAGGCAAATTCTGGAAGTCACA...TGGACCTAGGCAGTTCCTGACTGTTCCACATGTAGTACATTGTACCAAAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS TCA 90 bp CGACATTTTGGAATGGGATTCAGCAAAGTTGAGTGCAAGGTCTGTTaGAAGCTGGAGAGAACATCCGCTGAAACCTGTTCATTTAAGATT +
Preference number: 5 (lower is better)
Translates to: RHFGMGFSKVECKVC*KLERTSAETCSFKI
Trigger: AATCTTAAATGAACAGGTTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTCAACTTTGCTGAATCCCATTCCAAAATGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS-3UTR CAA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCGCGCTGGCCGACATTTaGGAATGGGATTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLALADI*EWDSAK
Trigger: CTTTGCTGAATCCCATTCCAAAATGTCGGCCAGCGC...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGATGCTGGGTCTCTTATaGACTGAATACTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: FFTSRIVLEKAVNSTSPQMLGLL*TEYSSE
Trigger: TTCTGAGGAGTATTCAGTCAATAAGAGACCCAGCAT...CTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCATGGGATTCAGCAAAGTaGAGTGCAAGGTCTGTTGAA +
Preference number: 5 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSWDSAK*SARSVE
Trigger: TTCAACAGACCTTGCACTCAACTTTGCTGAATCCCA...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTAAAGGTGCGTTTGAAGATCTaGGTTCGTTCTCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: LSTCVYTAVASFLAYTVKVRLKI*VRSPPT
Trigger: TGTGGGAGGAGAACGAACCAAGATCTTCAAACGCAC...CTTTACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCAGGGGTTCTCCAAGATaGGCGAGATCTGACTGTGAT +
Preference number: 5 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLRGSPR*ARSDCD
Trigger: ATCACAGTCAGATCTCGCCAATCTTGGAGAACCCCT...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS-3UTR CAA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCCTGTATGTTGACAGTTaGATTTTCAGGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSLYVDS*IFRLLR
Trigger: CCTGAGGAGCCTGAAAATCAAACTGTCAACATACAG...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp CATGAAGAGATAGTTCCACAGTGTCTCAGTTCTGAAGAAACTAAGAACAAAGTTGTAGTGCACTGGGACTaGACATCATCACAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: HEEIVPQCLSSEETKNKVVVHWD*TSSQGS
Trigger: AGAACCTTGTGATGATGTCAAGTCCCAGTGCACTAC...AACTTTGTTCTTAGTTTCTTCAGAACTGAGACACTGTGGAACTATCTCTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp TTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGAGACATCATCCTTTTTaGGGACCATTTCTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: FFTSRIVLEKAVNSTSPQRHHPF*GPFLSS
Trigger: TGAGGACAGAAATGGTCCCAAAAAAGGATGATGTCT...CTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp CATGAAGAGATAGTTCCACAGTGTCTCAGTTCTGAAGAAACTAAGAACAAAGTTACAATAGCAGGGGCTTaGGAAGCAACTGAGTCACTA +
Preference number: 5 (lower is better)
Translates to: HEEIVPQCLSSEETKNKVTIAGA*EATESL
Trigger: TAGTGACTCAGTTGCTTCCAAAGCCCCTGCTATTGT...AACTTTGTTCTTAGTTTCTTCAGAACTGAGACACTGTGGAACTATCTCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp GTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAGCTACTTGCTCTTCATAGATTTGGGACAGGATACTaGTTGTATACCACATACAAA +
Preference number: 5 (lower is better)
Translates to: VLEKAVNSTSPQLLALHRFGTGY*LYTTYK
Trigger: TTTGTATGTGGTATACAACAAGTATCCTGTCCCAAA...TCTATGAAGAGCAAGTAGCTGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCATGCTGGGTCTCTTATaGACTGAATACTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSMLGLL*TEYSSE
Trigger: TTCTGAGGAGTATTCAGTCAATAAGAGACCCAGCAT...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCTCAAGACATCATCCTTTTTaGGGACCATTTCTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: FLYFQNCPGKSSKFDLSSRHHPF*GPFLSS
Trigger: TGAGGACAGAAATGGTCCCAAAAAAGGATGATGTCT...TGAGGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp CATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCTCCAGTGTCTTCAAATGCTaGGCAGCTTTATTAACCTTG +
Preference number: 5 (lower is better)
Translates to: HFLYFQNCPGKSSKFDLSSVFKC*AALLTL
Trigger: CAAGGTTAATAAAGCTGCCAAGCATTTGAAGACACT...GGAGAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCCTGTATGTTGACAGTTaGATTTTCAGGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLLYVDS*IFRLLR
Trigger: CCTGAGGAGCCTGAAAATCAAACTGTCAACATACAG...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS-3UTR CAA 90 bp TTAAGTACATGTGTATACACTGCTGTTGCCAGTTTCTTAGCTTATACAGTAAAGAAAACTGAAGCAAATTaGCCATCTTGCAGTACAGCG +
Preference number: 5 (lower is better)
Translates to: LSTCVYTAVASFLAYTVKKTEAN*PSCSTA
Trigger: CGCTGTACTGCAAGATGGCAAATTTGCTTCAGTTTT...CTTTACTGTATAAGCTAAGAAACTGGCAACAGCAGTGTATACACATGTACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367771.11
CDS-3UTR CAA 90 bp TTACATTTTCTTTACTTCCAGAATTGTCCTGGAAAAAGCAGTAAATTCGACCTCAGACATCATCCTTTTTaGGGACCATTTCTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LHFLYFQNCPGKSSKFDLRHHPF*GPFLSS
Trigger: TGAGGACAGAAATGGTCCCAAAAAAGGATGATGTCT...GAGGTCGAATTTACTGCTTTTTCCAGGACAATTCTGGAAGTAAAGAAAATGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
CDS TCA 72 bp AGCAGATCAGGAACCGAGGTAGAGAGGCCGCACAGCTaGGTCTCAGGCCGGTGCCATCTTAAGTGTGGGCGC +
Preference number: 6 (lower is better)
Translates to: SRSGTEVERPHS*VSGRCHLKCGR
Trigger: GCGCCCACACTTAAGATGGCACCGGCCTGAGACTCAGCTGTGCGGCCTCTCTACCTCGGTTCCTGATCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423670.1
CDS CCA 72 bp GTTGACACCAACCACCCCTGCCTGCCTGTAAGGCTGTaGCCACTACACCCACAATCTTCTGGGGGCCGGGTT +
Preference number: 6 (lower is better)
Translates to: VDTNHPCLPVRL*PLHPQSSGGRV
Trigger: AACCCGGCCCCCAGAAGATTGTGGGTGTAGTGGCCACAGCCTTACAGGCAGGCAGGGGTGGTTGGTGTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367772.8
ENST00000470238.1
CDS CCA 72 bp TCAAACAACTGGAGAAGCACGGGGATCACCCGTGACTaGAACAGGGCTGGTGAGAGCAAGCAAGGAGTTTCT +
Preference number: 6 (lower is better)
Translates to: SNNWRSTGITRD*NRAGESKQGVS
Trigger: AGAAACTCCTTGCTTGCTCTCACCAGCCCTGTTCCAGTCACGGGTGATCCCCGTGCTTCTCCAGTTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS TCA 72 bp TTTCCAAAGCCACTTCCAGGGGCTGTACTCGCTCAGTaGCAAGATGAATGCCATCCGCTTCCACAGTACAAG +
Preference number: 6 (lower is better)
Translates to: FPKPLPGAVLAQ*QDECHPLPQYK
Trigger: CTTGTACTGTGGAAGCGGATGGCATTCATCTTGTCACTGAGCGAGTACAGCCCCTGGAAGTGGCTTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS GCA 72 bp TTCTCTGATCCCATCCCTTATGCAGTGAGGCAGTACTaGCACTCTTCCTCAAAGCCAAGCAGATCAGGAACC +
Preference number: 6 (lower is better)
Translates to: FSDPIPYAVRQY*HSSSKPSRSGT
Trigger: GGTTCCTGATCTGCTTGGCTTTGAGGAAGAGTGGCAGTACTGCCTCACTGCATAAGGGATGGGATCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423670.1
CDS GCA 72 bp ACTCACTGCCCCAGTGGTCTAGTTAGTCCACGAAGATaGCCCCTTTCTAGATGTGTTGGTCGAATGCTTAAG +
Preference number: 6 (lower is better)
Translates to: THCPSGLVSPRR*PLSRCVGRMLK
Trigger: CTTAAGCATTCGACCAACACATCTAGAAAGGGGGCATCTTCGTGGACTAACTAGACCACTGGGGCAGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423670.1
CDS CCA 72 bp CCAATGCCTTCTCCCTCTTTTCAGGACCTCTATAGCTaGAGACTGCCGAGAGCAAAAACCAACCCTGTTCAT +
Preference number: 6 (lower is better)
Translates to: PMPSPSFQDLYS*RLPRAKTNPVH
Trigger: ATGAACAGGGTTGGTTTTTGCTCTCGGCAGTCTCCAGCTATAGAGGTCCTGAAAAGAGGGAGAAGGCATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470238.1
CDS TCA 72 bp TTAAAGCACTGTTCTCTGATCCCATCCCTTATGCAGTaGGGCAGTACTGCCACTCTTCCTCAAAGCCAAGCA +
Preference number: 6 (lower is better)
Translates to: LKHCSLIPSLMQ*GSTATLPQSQA
Trigger: TGCTTGGCTTTGAGGAAGAGTGGCAGTACTGCCTCACTGCATAAGGGATGGGATCAGAGAACAGTGCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS TCA 72 bp GCCACTTCCAGGGGCTGTACTCGCTCAGTGACAAGATaGATGCCATCCGCTTCCACAGTACAAGATAAAAAT +
Preference number: 6 (lower is better)
Translates to: ATSRGCTRSVTR*MPSASTVQDKN
Trigger: ATTTTTATCTTGTACTGTGGAAGCGGATGGCATTCATCTTGTCACTGAGCGAGTACAGCCCCTGGAAGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS TCA 72 bp CGCTGGCCGACATTTTGGAATGGGATTCAGCAAAGTTaGGTGCAAGGTCTGTTGAAAGCTGGAGAGAACATC +
Preference number: 6 (lower is better)
Translates to: RWPTFWNGIQQS*VQGLLKAGENI
Trigger: GATGTTCTCTCCAGCTTTCAACAGACCTTGCACTCAACTTTGCTGAATCCCATTCCAAAATGTCGGCCAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS GCA 72 bp TCTGGTCCAAGCAGAGAGACCAGCACTGCTAGGCTATaGAGAGTAATTGCCACAATGGAATCGCTAGTATCA +
Preference number: 6 (lower is better)
Translates to: SGPSRETSTARL*RVIATMESLVS
Trigger: TGATACTAGCGATTCCATTGTGGCAATTACTCTGCATAGCCTAGCAGTGCTGGTCTCTCTGCTTGGACCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS CCA 72 bp TTTAGGGAATATGCTAGAGAAGGGGTTCTCCAAGATTaGCGAGATCTGACTGTGATGGCTGCAGACGACACA +
Preference number: 6 (lower is better)
Translates to: FREYAREGVLQD*RDLTVMAADDT
Trigger: TGTGTCGTCTGCAGCCATCACAGTCAGATCTCGCCAATCTTGGAGAACCCCTTCTCTAGCATATTCCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367770.5
ENST00000367772.8
CDS CCA 72 bp TCCCAAGATGACTCTTCCACATCCAAGGTAGTGCACTaGGACTTGACATCATCACAAGGTTCTCTAGGCCAA +
Preference number: 6 (lower is better)
Translates to: SQDDSSTSKVVH*DLTSSQGSLGQ
Trigger: TTGGCCTAGAGAACCTTGTGATGATGTCAAGTCCCAGTGCACTACCTTGGATGTGGAAGAGTCATCTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS CAA 72 bp CATGAGATAGTAAGGTGCAGAGCGCTGGCCGACATTTaGGAATGGGATTCAGCAAAGTTGAGTGCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: HEIVRCRALADI*EWDSAKLSARS
Trigger: AGACCTTGCACTCAACTTTGCTGAATCCCATTCCAAAATGTCGGCCAGCGCTCTGCACCTTACTATCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS CAA 90 bp GACATCATCACAAGGTTCTCTAGGCCAAATCTGTATGTTGACAGTTaGATTTTCAGGCTCCTCAGGTTCACTCCAGTCAGGCCACTCCTC +
Preference number: 6 (lower is better)
Translates to: DIITRFSRPNLYVDS*IFRLLRFTPVRPLL
Trigger: GAGGAGTGGCCTGACTGGAGTGAACCTGAGGAGCCTGAAAATCAAACTGTCAACATACAGATTTGGCCTAGAGAACCTTGTGATGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS TCA 72 bp AATGTTCCAAATGAAAAGGCATCCCGGGCATGTCCATaGCACTCTGGGAGAGTTGTGAATTCTGGAGACATC +
Preference number: 6 (lower is better)
Translates to: NVPNEKASRACP*HSGRVVNSGDI
Trigger: GATGTCTCCAGAATTCACAACTCTCCCAGAGTGTCATGGACATGCCCGGGATGCCTTTTCATTTGGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS TCA 72 bp GGAATGGGATTCAGCAAAGTTGAGTGCAAGGTCTGTTaGAAGCTGGAGAGAACATCCGCTGAAACCTGTTCA +
Preference number: 6 (lower is better)
Translates to: GMGFSKVECKVC*KLERTSAETCS
Trigger: TGAACAGGTTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTCAACTTTGCTGAATCCCATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS TCA 72 bp CAAGGTTCTCTAGGCCAAATCTGTATGTTGACAGTTTaGTTTTCAGGCTCCTCAGGTTCACTCCAGTCAGGC +
Preference number: 6 (lower is better)
Translates to: QGSLGQICMLTV*FSGSSGSLQSG
Trigger: GCCTGACTGGAGTGAACCTGAGGAGCCTGAAAATCAAACTGTCAACATACAGATTTGGCCTAGAGAACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS CCA 72 bp ATAGTAAGGTGCAGAGCGCTGGCCGACATTTTGGAATaGGATTCAGCAAAGTTGAGTGCAAGGTCTGTTGAA +
Preference number: 6 (lower is better)
Translates to: IVRCRALADILE*DSAKLSARSVE
Trigger: TTCAACAGACCTTGCACTCAACTTTGCTGAATCCCATTCCAAAATGTCGGCCAGCGCTCTGCACCTTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS CAA 72 bp GATGACTCTTCCACATCCAAGGTAGTGCACTGGGACTaGACATCATCACAAGGTTCTCTAGGCCAAATCTGT +
Preference number: 6 (lower is better)
Translates to: DDSSTSKVVHWD*TSSQGSLGQIC
Trigger: ACAGATTTGGCCTAGAGAACCTTGTGATGATGTCAAGTCCCAGTGCACTACCTTGGATGTGGAAGAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS CAA 90 bp TCATCCCAAGATGACTCTTCCACATCCAAGGTAGTGCACTGGGACTaGACATCATCACAAGGTTCTCTAGGCCAAATCTGTATGTTGACA +
Preference number: 6 (lower is better)
Translates to: SSQDDSSTSKVVHWD*TSSQGSLGQICMLT
Trigger: TGTCAACATACAGATTTGGCCTAGAGAACCTTGTGATGATGTCAAGTCCCAGTGCACTACCTTGGATGTGGAAGAGTCATCTTGGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS TCA 72 bp GGAATGGGATTCAGCAAAGTTGAGTGCAAGGTCTGTTaGAAGCTGGAGAGAACATCCGCTGAAACTGAAATC +
Preference number: 6 (lower is better)
Translates to: GMGFSKVECKVC*KLERTSAETEI
Trigger: GATTTCAGTTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTCAACTTTGCTGAATCCCATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470238.1
CDS CCA 72 bp GATTCAGCAAAGTTGAGTGCAAGGTCTGTTGAAAGCTaGAGAGAACATCCGCTGAAACTGAAATCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: DSAKLSARSVES*REHPLKLKSRA
Trigger: AGCTCTGGATTTCAGTTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTCAACTTTGCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470238.1
CDS CAA 72 bp ACAAGGTTCTCTAGGCCAAATCTGTATGTTGACAGTTaGATTTTCAGGCTCCTCAGGTTCACTCCAGTCAGG +
Preference number: 6 (lower is better)
Translates to: TRFSRPNLYVDS*IFRLLRFTPVR
Trigger: CCTGACTGGAGTGAACCTGAGGAGCCTGAAAATCAAACTGTCAACATACAGATTTGGCCTAGAGAACCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS CCA 72 bp GATTCAGCAAAGTTGAGTGCAAGGTCTGTTGAAAGCTaGAGAGAACATCCGCTGAAACCTGTTCATTTAAGA +
Preference number: 6 (lower is better)
Translates to: DSAKLSARSVES*REHPLKPVHLR
Trigger: TCTTAAATGAACAGGTTTCAGCGGATGTTCTCTCCAGCTTTCAACAGACCTTGCACTCAACTTTGCTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
CDS TCA 72 bp CCGAGAGCAAAAACCAACCCTGTTCATTTAAGATTGTaGGCAAACTTTCCACCAATGTTCCAAATGAAAAGG +
Preference number: 6 (lower is better)
Translates to: PRAKTNPVHLRL*ANFPPMFQMKR
Trigger: CCTTTTCATTTGGAACATTGGTGGAAAGTTTGCTCACAATCTTAAATGAACAGGGTTGGTTTTTGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470238.1
CDS TCA 72 bp TCCACAGTACAAGATAAAAATCTTAGCAAGCAAGGGTaGCGAAGTGTCTTCAAATGCTTGGCAGCTTTATTA +
Preference number: 6 (lower is better)
Translates to: STVQDKNLSKQG*RSVFKCLAALL
Trigger: TAATAAAGCTGCCAAGCATTTGAAGACACTTCGTCACCCTTGCTTGCTAAGATTTTTATCTTGTACTGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1
ENST00000470238.1
CDS TCA 72 bp AGAGAACATCCGCTGAAACCTGTTCATTTAAGATTGTaGGCAAACTTTCCACCAATGTTCCAAATGAAAAGG +
Preference number: 6 (lower is better)
Translates to: REHPLKPVHLRL*ANFPPMFQMKR
Trigger: CCTTTTCATTTGGAACATTGGTGGAAAGTTTGCTCACAATCTTAAATGAACAGGTTTCAGCGGATGTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367770.5
ENST00000367771.11
ENST00000367772.8
ENST00000423670.1