Pregenerated sensors for SCYL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000136021Ensembl transcript IDs: ENST00000360820.7, ENST00000547202.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTGGGTCTTTAAAAACCTaGAGAGGAGTTGGTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGGSLKT*RGVGKR Trigger: CCTCTTACCAACTCCTCTTCAGGTTTTTAAAGACCC...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| 3UTR-3UTR TCA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTACTATCATGGCAAGCTaGAAATCTGTTGGTGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VNQVQPIQKSDVKADFYFTIMAS*KSVGGQ Trigger: CTGACCACCAACAGATTTTCAGCTTGCCATGATAGT...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| 3UTR CAA 90 bp | GCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGTaGGTGGTCAGAAGATACAACTGCTCAATTTTTACAGAAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: AVINEVRLSWQAENL*VVRRYNCSIFTEVK Trigger: CTTTACTTCTGTAAAAATTGAGCAGTTGTATCTTCTGACCACCAACAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| 3UTR-3UTR TCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTAAGTACCCTCTTAACTaGATGCTGCCAGCAATAATA | + |
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Preference number: 2 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGKYPLN*MLPAII Trigger: TATTATTGCTGGCAGCATTCAGTTAAGAGGGTACTT...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| 3UTR-3UTR CCA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTAAGCTGAAAATCTGTTaGTGGTCAGAAGATACAACT | + |
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Preference number: 2 (lower is better) Translates to: VNQVQPIQKSDVKADFYFKLKIC*WSEDTT Trigger: AGTTGTATCTTCTGACCACCAACAGATTTTCAGCTT...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| 3UTR-3UTR CCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTACAGGACAGCTAATCTaGTCAAGTTGTGAATATATT | + |
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Preference number: 2 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGTGQLI*SSCEYI Trigger: AATATATTCACAACTTGACCAGATTAGCTGTCCTGT...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| 3UTR CCA 72 bp | ATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGTTaGTGGTCAGAAGATACAACTGCTCAATTTTTACAG | + |
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Preference number: 3 (lower is better) Translates to: MRSDYHGKLKIC*WSEDTTAQFLQ Trigger: CTGTAAAAATTGAGCAGTTGTATCTTCTGACCACCAACAGATTTTCAGCTTGCCATGATAGTCTGACCTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| 3UTR-3UTR CAA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTCAAGCTGAAAATCTGTaGGTGGTCAGAAGATACAAC | + |
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Preference number: 3 (lower is better) Translates to: VNQVQPIQKSDVKADFYFQAENL*VVRRYN Trigger: GTTGTATCTTCTGACCACCAACAGATTTTCAGCTTG...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTCGAGAGAGCCGCCGGTaGGGGAGGTCGGTCGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGRESRR*GRSVGA Trigger: GGCACCGACCGACCTCCCTCACCGGCGGCTCTCTCG...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CCA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTGCTCTCGAGCCGGCATaGGGGGCTCTCCCTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: VNQVQPIQKSDVKADFYFALEPA*GALPPA Trigger: TGCCGGAGGGAGAGCCCCCCATGCCGGCTCGAGAGC...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR GCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTAGGGAGGTCGGTCGGTaGCGGCGGCCGGTCACTTAC | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGREVGR*RRPVTY Trigger: GTAAGTGACCGGCCGCCGGCACCGACCGACCTCCCT...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR GCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTCTCCCCGGAGCTCGCTaGTCGTCCAGCCCCGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGLPGAR*SSSPAL Trigger: CAAAGCGGGGCTGGACGAGCAGCGAGCTCCGGGGAG...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTTCTCCCTCCGGCAGCTaGCTTCGATCCCGGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VNQVQPIQKSDVKADFYFSPSGS*LRSRVS Trigger: GGAGACCCGGGATCGAAGTCAGCTGCCGGAGGGAGA...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR GCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTCCTCCTGGCTGTTCCTaGTCTGCCTTCGTGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGPPGCS*SAFVPG Trigger: GCCAGGCACGAAGGCAGAGCAGGAACAGCCAGGAGG...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTCTCTGCCTTCGTGCCTaGCCACTGACTCTGGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGLCLRA*PLTLAL Trigger: TAAAGCCAGAGTCAGTGGCCAGGCACGAAGGCAGAG...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTTTCGTGCCTGGCCACTaGCTCTGGCTTTACTCCATA | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGFVPGH*LWLYSI Trigger: TATGGAGTAAAGCCAGAGTCAGTGGCCAGGCACGAA...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CCA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTGCCCATTGCCACCACTaGCAATGTGTCGACCAACAT | + |
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Preference number: 4 (lower is better) Translates to: VNQVQPIQKSDVKADFYFAHCHH*QCVDQH Trigger: ATGTTGGTCGACACATTGCCAGTGGTGGCAATGGGC...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTCTGTGTCCCCATTACTaGACTGCCCATAGTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGLCPHY*TAHSWR Trigger: TCTCCAACTATGGGCAGTTCAGTAATGGGGACACAG...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTCTAATAAACGCCTCCTaGCTGTTCCTGCTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGLINAS*LFLLCL Trigger: AAGGCAGAGCAGGAACAGCCAGGAGGCGTTTATTAG...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | ACTTCAGTAGCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGCCTAAACGACTCAACTaGTCCAACTGCCTACTGAAA | + |
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Preference number: 4 (lower is better) Translates to: TSVAVINEVRLSWQAENLPKRLN*SNCLLK Trigger: TTTCAGTAGGCAGTTGGATCAGTTGAGTCGTTTAGG...CAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGCTACTGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | ACTTCAGTAGCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGGGGTCTTTAAAAACCTaGAGAGGAGTTGGTAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TSVAVINEVRLSWQAENLGSLKT*RGVGKR Trigger: CCTCTTACCAACTCCTCTTCAGGTTTTTAAAGACCC...CAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGCTACTGAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTAAATTCTCTGCACAATaGCACGCTTGGGCAGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: VNQVQPIQKSDVKADFYFKFSAQ*HAWAVL Trigger: CAAAACTGCCCAAGCGTGTCATTGTGCAGAGAATTT...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTACTATCATGGCAAGCTaGAAATCTGTTGGTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGTIMAS*KSVGGQ Trigger: CTGACCACCAACAGATTTTCAGCTTGCCATGATAGT...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTGGTGCATACTCCTCTTaGTATCAGGTATGTTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: VNQVQPIQKSDVKADFYFGAYSS*YQVCSH Trigger: ATGCGAACATACCTGATATCAAGAGGAGTATGCACC...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | ACTTCAGTAGCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGAAGTACCCTCTTAACTaGATGCTGCCAGCAATAATA | + |
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Preference number: 4 (lower is better) Translates to: TSVAVINEVRLSWQAENLKYPLN*MLPAII Trigger: TATTATTGCTGGCAGCATTCAGTTAAGAGGGTACTT...CAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGCTACTGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CCA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTAGCCGAGTTAACTGTTaGACTCCTCGTTTTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VNQVQPIQKSDVKADFYFSRVNC*TPRFRE Trigger: TTCTCTAAAACGAGGAGTCCAACAGTTAACTCGGCT...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CCA 90 bp | ACTTCAGTAGCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGCTGAAAATCTGTTGGTaGTCAGAAGATACAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: TSVAVINEVRLSWQAENLLKICW*SEDTTA Trigger: AGCAGTTGTATCTTCTGACCACCAACAGATTTTCAG...CAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGCTACTGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| 3UTR CAA 72 bp | AATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGTaGGTGGTCAGAAGATACAACTGCTCAATTTTTACA | + |
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Preference number: 4 (lower is better) Translates to: NEVRLSWQAENL*VVRRYNCSIFT Trigger: TGTAAAAATTGAGCAGTTGTATCTTCTGACCACCAACAGATTTTCAGCTTGCCATGATAGTCTGACCTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTAGAAGTGAAAGTACTTaGAGCAGAAGATTTAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGRSEST*SRRFRG Trigger: ACCCCTAAATCTTCTGCTTCAAGTACTTTCACTTCT...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CCA 90 bp | ACTTCAGTAGCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGAAGCTGAAAATCTGTTaGTGGTCAGAAGATACAACT | + |
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Preference number: 4 (lower is better) Translates to: TSVAVINEVRLSWQAENLKLKIC*WSEDTT Trigger: AGTTGTATCTTCTGACCACCAACAGATTTTCAGCTT...CAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGCTACTGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR TCA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTAATCCTTCAGAAACCTaGAGCAAACCATATTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGNPSET*SKPYLV Trigger: AACCAAATATGGTTTGCTTCAGGTTTCTGAAGGATT...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CCA 90 bp | ACTTCAGTAGCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGACAGGACAGCTAATCTaGTCAAGTTGTGAATATATT | + |
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Preference number: 4 (lower is better) Translates to: TSVAVINEVRLSWQAENLTGQLI*SSCEYI Trigger: AATATATTCACAACTTGACCAGATTAGCTGTCCTGT...CAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGCTACTGAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CCA 90 bp | GTTAACCAAGTACAGCCCATACAGAAATCAGATGTGAAAGCTGACTTCTATTTTAAAATTAACAAAATCTaGATTGGCTCCTGCTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: VNQVQPIQKSDVKADFYFKINKI*IGSCCL Trigger: TAAGCAGCAGGAGCCAATCCAGATTTTGTTAATTTT...AAAATAGAAGTCAGCTTTCACATCTGATTTCTGTATGGGCTGTACTTGGTTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS TCA 90 bp | TTCCCTCCTCGCCGGCTCCGGGAGCCCAGGCGAGAGAGCCGCCGGTaGGGGAGGTCGGTCGGTGCCGGCGGCCGGTCACTTACCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FPPRRLREPRRESRR*GRSVGAGGRSLTSS Trigger: GGAAGAGGTAAGTGACCGGCCGCCGGCACCGACCGACCTCCCTCACCGGCGGCTCTCTCGCCTGGGCTCCCGGAGCCGGCGAGGAGGGAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS GCA 90 bp | TCTTTCGAGGACTCGGCCCTCTCGGATCCGCTCCCCGGAGCTCGCTaGTCGTCCAGCCCCGCTTTGCGCGGGCGCCGACCGCCGATCGCC | + |
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Preference number: 5 (lower is better) Translates to: SFEDSALSDPLPGAR*SSSPALRGRRPPIA Trigger: GGCGATCGGCGGTCGGCGCCCGCGCAAAGCGGGGCTGGACGAGCAGCGAGCTCCGGGGAGCGGATCCGAGAGGGCCGAGTCCTCGAAAGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS GCA 90 bp | CCGGGAGCCCAGGCGAGAGAGCCGCCGGTGAGGGAGGTCGGTCGGTaGCGGCGGCCGGTCACTTACCTCTTCCTTCTTCCAGGAGGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PGAQAREPPVREVGR*RRPVTYLFLLPGGA Trigger: CGCCCCTCCTGGAAGAAGGAAGAGGTAAGTGACCGGCCGCCGGCACCGACCGACCTCCCTCACCGGCGGCTCTCTCGCCTGGGCTCCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS CCA 90 bp | GGTACTACGTTCTCCACCACCGAAACCCGAGCTCTCGAGCCGGCATaGGGGGCTCTCCCTCCGGCAGCTGACTTCGATCCCGGGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GTTFSTTETRALEPA*GALPPAADFDPGSP Trigger: GGGAGACCCGGGATCGAAGTCAGCTGCCGGAGGGAGAGCCCCCCATGCCGGCTCGAGAGCTCGGGTTTCGGTGGTGGAGAACGTAGTACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTAGCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGTGCACAATGACACGCTaGGGCAGTTTTGGTAGAACC | + |
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Preference number: 5 (lower is better) Translates to: TSVAVINEVRLSWQAENLCTMTR*GSFGRT Trigger: GGTTCTACCAAAACTGCCCAAGCGTGTCATTGTGCA...CAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGCTACTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTAGCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGTGGTGCATACTCCTCTaGATATCAGGTATGTTCGCA | + |
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Preference number: 5 (lower is better) Translates to: TSVAVINEVRLSWQAENLWCILL*ISGMFA Trigger: TGCGAACATACCTGATATCAAGAGGAGTATGCACCA...CAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGCTACTGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTAGCAGTAATTAATGAGGTCAGACTATCATGGCAAGCTGAAAATCTGCAAAGAAGGGAATCTTaGTCATTTGATCTGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: TSVAVINEVRLSWQAENLQRRES*SFDLHL Trigger: CAGATGCAGATCAAATGACAAAGATTCCCTTCTTTG...CAGATTTTCAGCTTGCCATGATAGTCTGACCTCATTAATTACTGCTACTGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CAA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTCATACCAAAAGCAGATaGTCCTATCACGTTCATCTG | + |
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Preference number: 5 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGHTKSR*SYHVHL Trigger: CAGATGAACGTGATAGGACAATCTGCTTTTGGTATG...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS-3UTR CAA 90 bp | GGCAATTTCTCAACAGAAAAAGGCAATGGTAACAGTTCAATTGATGGAAATGGTCAAGCTGAAAATCTGTaGGTGGTCAGAAGATACAAC | + |
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Preference number: 5 (lower is better) Translates to: GNFSTEKGNGNSSIDGNGQAENL*VVRRYN Trigger: GTTGTATCTTCTGACCACCAACAGATTTTCAGCTTG...ACCATTTCCATCAATTGAACTGTTACCATTGCCTTTTTCTGTTGAGAAATTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS GCA 72 bp | GACTCGGCCCTCTCGGATCCGCTCCCCGGAGCTCGCTaGTCGTCCAGCCCCGCTTTGCGCGGGCGCCGACCG | + |
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Preference number: 6 (lower is better) Translates to: DSALSDPLPGAR*SSSPALRGRRP Trigger: CGGTCGGCGCCCGCGCAAAGCGGGGCTGGACGAGCAGCGAGCTCCGGGGAGCGGATCCGAGAGGGCCGAGTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS GCA 72 bp | CAGGCGAGAGAGCCGCCGGTGAGGGAGGTCGGTCGGTaGCGGCGGCCGGTCACTTACCTCTTCCTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QAREPPVREVGR*RRPVTYLFLLP Trigger: TGGAAGAAGGAAGAGGTAAGTGACCGGCCGCCGGCACCGACCGACCTCCCTCACCGGCGGCTCTCTCGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS CCA 72 bp | TTCTCCACCACCGAAACCCGAGCTCTCGAGCCGGCATaGGGGGCTCTCCCTCCGGCAGCTGACTTCGATCCC | + |
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Preference number: 6 (lower is better) Translates to: FSTTETRALEPA*GALPPAADFDP Trigger: GGGATCGAAGTCAGCTGCCGGAGGGAGAGCCCCCCATGCCGGCTCGAGAGCTCGGGTTTCGGTGGTGGAGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360820.7 |
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| CDS CAA 72 bp | CTCCCGGAGTTGTTTAATAGCTATTATTCAGGGGCCTaGTATAAATTCACCCTTAGCAGTTATATATTGATC | + |
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Preference number: 6 (lower is better) Translates to: LPELFNSYYSGA*YKFTLSSYILI Trigger: GATCAATATATAACTGCTAAGGGTGAATTTATACAAGGCCCCTGAATAATAGCTATTAAACAACTCCGGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547202.1 |
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