Pregenerated sensors for SCX (Homo sapiens)
Ensembl gene IDs: ENSG00000260428Ensembl transcript IDs: ENST00000567180.3
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCCAGTGGGCCCGGGCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTaGCGGCGCCTGTCTGTACGTCCGTCTGTCCCTCGGCCCCGCTCG | + |
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Preference number: 1 (lower is better) Translates to: FQWARAGAGASAESR*RRLSVRPSVPRPRS Trigger: CGAGCGGGGCCGAGGGACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGCCCGGGCCCACTGGAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR CCA 90 bp | GTACGTCCGTCTGTCCCTCGGCCCCGCTCGCAGCCAGGGCTGGCCTaGGGGCATGCTTGCGGTGGGCCTTGCCCAGCTCAGGTCCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: VRPSVPRPRSQPGLA*GHACGGPCPAQVQG Trigger: ACCTTGGACCTGAGCTGGGCAAGGCCCACCGCAAGCATGCCCCCAGGCCAGCCCTGGCTGCGAGCGGGGCCGAGGGACAGACGGACGTAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR CCA 90 bp | GAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCCCGGGCAGGTGCTaGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCC | + |
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Preference number: 1 (lower is better) Translates to: EEKPAQKVPVGPGRC*GQRRVPLPAPVCTS Trigger: GGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGCCCGGGCCCACTGGAACTTTCTGCGCTGGCTTTTCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR CCA 90 bp | AGACTTTATATTATCATATCAAAAACACAAGATGCCATCACACAGTaGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCCCGGGC | + |
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Preference number: 1 (lower is better) Translates to: RLYIIISKTQDAITQ*PEEKPAQKVPVGPG Trigger: GCCCGGGCCCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATCTTGTGTTTTTGATATGATAATATAAAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCGGGCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTAGCTCGCAGCCAGGGCTaGCCTGGGGGCATGCTTGCG | + |
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Preference number: 2 (lower is better) Translates to: ARAGAGASAESRCRRLSVARSQG*PGGMLA Trigger: CGCAAGCATGCCCCCAGGCCAGCCCTGGCTGCGAGC...TACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGCCCGGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTCTGTCCAAGGTGGGGGCTGTCTaGAGTCACCCCGGGCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LGPAQSPAAGACLYVRLSKVGAV*SHPGRP Trigger: TGGACGCCCGGGGTGACTGCAGACAGCCCCCACCTT...GGACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTCTGTCCGGGGCATGCTTGCGGTaGGCCTTGCCCAGCTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LGPAQSPAAGACLYVRLSGACLR*ALPSSG Trigger: ACCTGAGCTGGGCAAGGCCCACCGCAAGCATGCCCC...GGACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCCCCAGCCAGGGCTGGCCTaGGGGCATGCTTGCGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CHHTVAGRKASAESSSGPQPGLA*GHACGG Trigger: CCCACCGCAAGCATGCCCCCAGGCCAGCCCTGGCTG...GGGCCCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGATGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGTCCCCCAGCAGCGTCTaGCTCCTGGCTGCTGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: QDAITQWPEEKPAQKVPVSPSSV*LLAAAG Trigger: GCCGGCAGCAGCCAGGAGGCAGACGCTGCTGGGGGA...CACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR-3UTR GCA 90 bp | AAGATGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCTGGCCTGGGGGCATaGTTGCGGTGGGCCTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: KMPSHSGRKKSQRRKFQWAGLGA*LRWALP Trigger: GGGCAAGGCCCACCGCAAGCATGCCCCCAGGCCAGC...CCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR-3UTR GCA 90 bp | AAGATGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCTTGCGGTGGGCCTTaGCCAGCTCAGGTCCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: KMPSHSGRKKSQRRKFQWACGGP*PAQVQG Trigger: ACCTTGGACCTGAGCTGGGCAAGGCCCACCGCAAGC...CCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTGCTTGCGGTGGGCCTaGCCCAGCTCAGGTCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: AGAGASAESRCRRLSVRPCLRWA*PSSGPR Trigger: CCTTGGACCTGAGCTGGGCAAGGCCCACCGCAAGCA...CGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR CCA 72 bp | TGCTTGCGGTGGGCCTTGCCCAGCTCAGGTCCAAGGTaGGGGCTGTCTGCAGTCACCCCGGGCGTCCACCTC | + |
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Preference number: 3 (lower is better) Translates to: CLRWALPSSGPR*GLSAVTPGVHL Trigger: GAGGTGGACGCCCGGGGTGACTGCAGACAGCCCCCACCTTGGACCTGAGCTGGGCAAGGCCCACCGCAAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| 3UTR CCA 72 bp | ATTATCATATCAAAAACACAAGATGCCATCACACAGTaGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: IIISKTQDAITQ*PEEKPAQKVPV Trigger: CACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATCTTGTGTTTTTGATATGATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CCA 90 bp | CCGGGCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGCAGCCAGGGCTGGCCTaGGGGCATGCTTGCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PGRCWGQRRVPLPAPVCTQPGLA*GHACGG Trigger: CCCACCGCAAGCATGCCCCCAGGCCAGCCCTGGCTG...CGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGCCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | CCGGGCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGAGCTCTGTCGCGCGCTaGTCATGCCGCCTCCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: PGRCWGQRRVPLPAPVCTSSVAR*SCRLLR Trigger: CCGCAGGAGGCGGCATGAGCAGCGCGCGACAGAGCT...CGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGCCCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CCA 90 bp | GCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGGCAGCGTCTGCCTCCTaGCTGCTGCCGGCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: AGAGASAESRCRRLSVRPAASAS*LLPATS Trigger: GGAGGTGGCCGGCAGCAGCCAGGAGGCAGACGCTGC...CGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | CTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTCTGTCCAGCCCGAGCTGTCGCTaGCGCGGTCCTCGTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LGPAQSPAAGACLYVRLSSPSCR*RGPRPP Trigger: CGGAGGACGAGGACCGCGGCAGCGACAGCTCGGGCT...GGACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | CTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTCTGTCCCCGCAGCGCGCCGCGTaGACGCGACAGGGTTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: LGPAQSPAAGACLYVRLSPQRAA*TRQGFS Trigger: CGAGAAACCCTGTCGCGTGCACGCGGCGCGCTGCGG...GGACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | AGCCAGGGCTGGCCTGGGGGCATGCTTGCGGTGGGCCTTGCCCAGCTCAGGTCCGCTGGCCTGGGGGCATaGTTGCGGTGGGCCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQGWPGGMLAVGLAQLRSAGLGA*LRWALP Trigger: GGGCAAGGCCCACCGCAAGCATGCCCCCAGGCCAGC...GGACCTGAGCTGGGCAAGGCCCACCGCAAGCATGCCCCCAGGCCAGCCCTGGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CCA 90 bp | GCCCGGGCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGCAGAAAGTTCCAGTaGGCCCGGGCAGGTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ARAGAGASAESRCRRLSVRRKFQ*ARAGAG Trigger: CCCAGCACCTGCCCGGGCCCACTGGAACTTTCTGCG...TACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGCCCGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CCA 90 bp | GCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGGGGGCATGCTTGCGGTaGGCCTTGCCCAGCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: AGAGASAESRCRRLSVRPGACLR*ALPSSG Trigger: ACCTGAGCTGGGCAAGGCCCACCGCAAGCATGCCCC...CGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CCA 90 bp | TGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTCTGTGCTCGCAGCCAGGGCTaGCCTGGGGGCATGCTTGCG | + |
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Preference number: 4 (lower is better) Translates to: CWGQRRVPLPAPVCTSVCARSQG*PGGMLA Trigger: CGCAAGCATGCCCCCAGGCCAGCCCTGGCTGCGAGC...ACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | AGCCAGGGCTGGCCTGGGGGCATGCTTGCGGTGGGCCTTGCCCAGCTCAGGTCCAAGGTGGGGGCTGTCTaGAGTCACCCCGGGCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SQGWPGGMLAVGLAQLRSKVGAV*SHPGRP Trigger: TGGACGCCCGGGGTGACTGCAGACAGCCCCCACCTT...GGACCTGAGCTGGGCAAGGCCCACCGCAAGCATGCCCCCAGGCCAGCCCTGGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | CTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTCTGTCCTGTTCACGCTGTTGGTaGGGTCTCGCTCGCGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: LGPAQSPAAGACLYVRLSCSRCW*GLARAR Trigger: ACGCGCGCGAGCGAGACCGCACCAACAGCGTGAACA...GGACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CCA 90 bp | CTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTCTGTCCCAGATCTGTTTGGGCTaGGTGTTCTCGCCGTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: LGPAQSPAAGACLYVRLSQICLG*VFSPSR Trigger: CCGCGACGGCGAGAACACCCAGCCCAAACAGATCTG...GGACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | TGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCCCTTCGCCGTGTGCCGCTaGCGGGGCTCACGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CHHTVAGRKASAESSSGPFAVCR*RGSRPG Trigger: GCCAGGCCGTGAGCCCCGGCAGCGGCACACGGCGAA...GGGCCCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | GCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGCGGCCACCTCCTAACTaGGAATCGCTGTCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: AGAGASAESRCRRLSVRPRPPPN*ESLSFC Trigger: ACAGAAAGACAGCGATTCGCAGTTAGGAGGTGGCCG...CGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CCA 90 bp | AGCCAGGGCTGGCCTGGGGGCATGCTTGCGGTGGGCCTTGCCCAGCTCAGGTCCAGGTGCAGATCTGTTTaGGCTGGGTGTTCTCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SQGWPGGMLAVGLAQLRSRCRSV*AGCSRR Trigger: ACGGCGAGAACACCCAGCCCAAACAGATCTGCACCT...GGACCTGAGCTGGGCAAGGCCCACCGCAAGCATGCCCCCAGGCCAGCCCTGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | GATGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCGTGGGCCCGGGCAGGTaGTGGGGCCAGCGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: DAITQWPEEKPAQKVPVGVGPGR*WGQRRV Trigger: GACTCTGCGCTGGCCCCAGCACCTGCCCGGGCCCAC...GCCCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | GATGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCTCCCCCAGCAGCGTCTaGCTCCTGGCTGCTGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: DAITQWPEEKPAQKVPVGSPSSV*LLAAAG Trigger: GCCGGCAGCAGCCAGGAGGCAGACGCTGCTGGGGGA...GCCCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | TGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCCCGCTTGCGGTGGGCCTTaGCCAGCTCAGGTCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: CHHTVAGRKASAESSSGPACGGP*PAQVQG Trigger: ACCTTGGACCTGAGCTGGGCAAGGCCCACCGCAAGC...GGGCCCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | CTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTCTGTCCATCAAAAACACAAGATaGCATCACACAGTGGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: LGPAQSPAAGACLYVRLSIKNTR*HHTVAG Trigger: TCCGGCCACTGTGTGATGGCATCTTGTGTTTTTGAT...GGACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | CAAGATGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGCTGCCTCCTGGCTGCTaGCGGCCACCTCCTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: QDAITQWPEEKPAQKVPVLPPGC*RPPPNC Trigger: GCAGTTAGGAGGTGGCCGGCAGCAGCCAGGAGGCAG...CACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR GCA 90 bp | AAGATGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGAGCGCAGAGTCCCGCTaGCGGCGCCTGTCTGTACGT | + |
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Preference number: 4 (lower is better) Translates to: KMPSHSGRKKSQRRKFQWSAESR*RRLSVR Trigger: ACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCT...CCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CCA 90 bp | CAAGATGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGATGCCATCACACAGTaGCCGGAAGAAAAGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: QDAITQWPEEKPAQKVPVDAITQ*PEEKPA Trigger: CGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATC...CACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS CCA 90 bp | ACAGGTAGCGGCCCGGCGGCGCCGGGCGCAGCGTGGCGAAGGACATaGGGCCGGCGGGGGCGCGGCGTCAGCTCTGTCGCGCGCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: TGSGPAAPGAAWRRT*GRRGRGVSSVARCS Trigger: TGAGCAGCGCGCGACAGAGCTGACGCCGCGCCCCCGCCGGCCCCATGTCCTTCGCCACGCTGCGCCCGGCGCCGCCGGGCCGCTACCTGT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CAA 90 bp | GCCCGGGCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTAGGCCTGGGGGCATGCTaGCGGTGGGCCTTGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ARAGAGASAESRCRRLSVGLGAC*RWALPS Trigger: GCTGGGCAAGGCCCACCGCAAGCATGCCCCCAGGCC...TACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGCCCGGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS GCA 90 bp | CCGCGTGCACGCGACAGGGTTTCTCGTCGGAGCCCGAGCTGTCGCTaGCGCGGTCCTCGTCCTCCGACAGCGGGCTCACCTCGGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: PRARDRVSRRSPSCR*RGPRPPTAGSPRGT Trigger: TGTACCCCGAGGTGAGCCCGCTGTCGGAGGACGAGGACCGCGGCAGCGACAGCTCGGGCTCCGACGAGAAACCCTGTCGCGTGCACGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS GCA 90 bp | GGCTGTCTGCAGTCACCCCGGGCGTCCACCTCCCCCAGCAGCGTCTaGCTCCTGGCTGCTGCCGGCCACCTCCTAACTGCGAATCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: GCLQSPRASTSPSSV*LLAAAGHLLTANRC Trigger: ACAGCGATTCGCAGTTAGGAGGTGGCCGGCAGCAGCCAGGAGGCAGACGCTGCTGGGGGAGGTGGACGCCCGGGGTGACTGCAGACAGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CAA 90 bp | CTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTCTGTCCTCAATCTTGGAGAGCTaGCGGTCGGCGGGCTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: LGPAQSPAAGACLYVRLSSILES*RSAGSV Trigger: CACCGAGCCCGCCGACCGCAAGCTCTCCAAGATTGA...GGACAGACGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CAA 90 bp | GCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGAAGGTGCAGATCTGTTaGGGCTGGGTGTTCTCGCCG | + |
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Preference number: 5 (lower is better) Translates to: AGAGASAESRCRRLSVRPKVQIC*GWVFSP Trigger: CGGCGAGAACACCCAGCCCAAACAGATCTGCACCTT...CGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CAA 90 bp | GCAGGTGCTGGGGCCAGCGCAGAGTCCCGCTGCCGGCGCCTGTCTGTACGTCCGTTTCTGTCGCGGTCCTaGCTCAACTTTCTCTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: AGAGASAESRCRRLSVRPFLSRS*LNFLWL Trigger: CAACCAGAGAAAGTTGAGCAAGGACCGCGACAGAAA...CGGACGTACAGACAGGCGCCGGCAGCGGGACTCTGCGCTGGCCCCAGCACCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS-3UTR CAA 90 bp | GATGCCATCACACAGTGGCCGGAAGAAAAGCCAGCGCAGAAAGTTCCAGTGGGCTGCTTGCGGTGGGCCTaGCCCAGCTCAGGTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: DAITQWPEEKPAQKVPVGCLRWA*PSSGPR Trigger: CCTTGGACCTGAGCTGGGCAAGGCCCACCGCAAGCA...GCCCACTGGAACTTTCTGCGCTGGCTTTTCTTCCGGCCACTGTGTGATGGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS GCA 72 bp | CTGTTGGTGCGGTCTCGCTCGCGCGCGTTCGCCGTGTaGCGCTGCCGGGGCTCACGGCCTGGCCGGCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LLVRSRSRAFAV*RCRGSRPGRPP Trigger: AGGGGGCCGGCCAGGCCGTGAGCCCCGGCAGCGGCACACGGCGAACGCGCGCGAGCGAGACCGCACCAACAG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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| CDS GCA 72 bp | CGCGACAGGGTTTCTCGTCGGAGCCCGAGCTGTCGCTaGCGCGGTCCTCGTCCTCCGACAGCGGGCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: RDRVSRRSPSCR*RGPRPPTAGSP Trigger: AGGTGAGCCCGCTGTCGGAGGACGAGGACCGCGGCAGCGACAGCTCGGGCTCCGACGAGAAACCCTGTCGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567180.3 |
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