RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCUBE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000175356

Ensembl transcript IDs: ENST00000309263.7, ENST00000450649.6, ENST00000518447.1, ENST00000519202.1, ENST00000519535.1, ENST00000519788.6, ENST00000520467.5, ENST00000524317.1, ENST00000528651.1, ENST00000530265.1, ENST00000531429.1, ENST00000532532.1, ENST00000534295.1, ENST00000649792.2

Found 736 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTCTaGCTGGTCAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAG +
Preference number: 1 (lower is better)
Translates to: GGSLQGSPSLPSCLF*LVRACTRVQRAPLE
Trigger: CTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTGACCAGGCAGAACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
3UTR TCA 90 bp CAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTaGTGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGG +
Preference number: 1 (lower is better)
Translates to: QPVIYPRHPPTAVRS*CHSKPFSVYIHDAG
Trigger: CCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR TCA 90 bp TGGCATTCAGGGGGTGTTTCTGGCAGTGCTGTTACTGTTAGAGAATaGGACCACCCTTCAAGGGGCTGCTCATGTCCACGGAGCAGAGTC +
Preference number: 1 (lower is better)
Translates to: WHSGGVSGSAVTVRE*DHPSRGCSCPRSRV
Trigger: GACTCTGCTCCGTGGACATGAGCAGCCCCTTGAAGGGTGGTCTCATTCTCTAACAGTAACAGCACTGCCAGAAACACCCCCTGAATGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR TCA 90 bp ACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTaGAGTTTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACT +
Preference number: 1 (lower is better)
Translates to: TSAEGSLREGRARGS*SFRISSLFCGLLST
Trigger: AGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR TCA 90 bp CCCACTTGGGGAGTAGAACCCTTGGCAATACCGACTCAGGGTTGGTaGAATCGCCTTTTCATGACAATTGATGATTCTCATCCACTGAGG +
Preference number: 1 (lower is better)
Translates to: PTWGVEPLAIPTQGW*NRLFMTIDDSHPLR
Trigger: CCTCAGTGGATGAGAATCATCAATTGTCATGAAAAGGCGATTTCACCAACCCTGAGTCGGTATTGCCAAGGGTTCTACTCCCCAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR TCA 90 bp ATGACAATTGATGATTCTCATCCACTGAGGAAATTACATTTCACCTaGACTCCCCAGTCCCTCAGGCAATGGCCAGCAGAGTGTCAGAGG +
Preference number: 1 (lower is better)
Translates to: MTIDDSHPLRKLHFT*TPQSLRQWPAECQR
Trigger: CCTCTGACACTCTGCTGGCCATTGCCTGAGGGACTGGGGAGTTCAGGTGAAATGTAATTTCCTCAGTGGATGAGAATCATCAATTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR-3UTR TCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTAGCTCAGCCAGCCCGTaGTCTATCCAAGACATCCGC +
Preference number: 2 (lower is better)
Translates to: ACTRVQRAPLERAGLEEASSASP*SIQDIR
Trigger: GCGGATGTCTTGGATAGATCACGGGCTGGCTGAGCT...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR TCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTGAGTCTCACCTAGGCTaGCCAAAGTCCAGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: SRWVEGACRGLLPSPLACESHLG*PKSSSA
Trigger: GGCTGAGCTGGACTTTGGTCAGCCTAGGTGAGACTC...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
3UTR-3UTR TCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTCCACTACAGACTCCTTaGGGAGGAGTAAGACCCCAG +
Preference number: 2 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAPLQTP*GGVRPQ
Trigger: CTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGG...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR TCA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCACCCCAGAAGGACAGGTaGGTCTCACCTAGGCTGACC +
Preference number: 2 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSPQKDR*VSPRLT
Trigger: GGTCAGCCTAGGTGAGACTCACCTGTCCTTCTGGGG...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR TCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAACTCTAATGAGTCACTaGTACGGGAGGCAGCAATAC +
Preference number: 2 (lower is better)
Translates to: QSLHTSAEGSLREGRARGTLMSH*YGRQQY
Trigger: GTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGT...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR CCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAAGCAGCTTATTCTGTaGCCTCCTTTCCACTACAGA +
Preference number: 2 (lower is better)
Translates to: QSLHTSAEGSLREGRARGKQLIL*PPFHYR
Trigger: TCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTT...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR CAA 90 bp GTGTCAGAGGGCACAGCTGAAGGTGCGAGAGTCAGCATAGTGCATTaGCTGCAGGGTGGAAGCTTGCAACGAGGAAGGCTGGCAATAAAT +
Preference number: 2 (lower is better)
Translates to: VSEGTAEGARVSIVH*LQGGSLQRGRLAIN
Trigger: ATTTATTGCCAGCCTTCCTCGTTGCAAGCTTCCACCCTGCAGCAAATGCACTATGCTGACTCTCGCACCTTCAGCTGTGCCCTCTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR-3UTR TCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAAGCTCAGCCAGCCCGTaGTCTATCCAAGACATCCGC +
Preference number: 2 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPSSASP*SIQDIR
Trigger: GCGGATGTCTTGGATAGATCACGGGCTGGCTGAGCT...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR TCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCAATACCCGACTGTGCTaGCATGCAGAAGGAAGACAG +
Preference number: 2 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLNTRLC*HAEGRQ
Trigger: CTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATT...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR TCA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATACAGCAGTGAGAAGCTaGTGCCACTCAAAGCCATTC +
Preference number: 2 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHTAVRS*CHSKPF
Trigger: GAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGT...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR TCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAATACCCGACTGTGCTaGCATGCAGAAGGAAGACAG +
Preference number: 2 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRNTRLC*HAEGRQ
Trigger: CTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATT...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR CCA 90 bp ATTGTCAGTGTCCCCAAATGCCTGTTAAAATTTGGCACTTGTGAGTCAGCAATGCAGCAGTTTGCCAGCTaGCTCCGAAGTTGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: IVSVPKCLLKFGTCESAMQQFAS*LRSWLC
Trigger: ACAGAGCCAACTTCGGAGCCAGCTGGCAAACTGCTG...CATTGCTGACTCACAAGTGCCAAATTTTAACAGGCATTTGGGGACACTGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
3UTR-3UTR TCA 90 bp TGTCCACGGAGCAGAGTCCGTCTCTCACATTTGAGACTGGGGAAGGAAGGCATAGAAATCGCCTTTTCATaGCAATTGATGATTCTCATC +
Preference number: 2 (lower is better)
Translates to: CPRSRVRLSHLRLGKEGIEIAFS*QLMILI
Trigger: GATGAGAATCATCAATTGTCATGAAAAGGCGATTTC...TATGCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGACTCTGCTCCGTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR-3UTR TCA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCAATACCCGACTGTGCTaGCATGCAGAAGGAAGACAG +
Preference number: 2 (lower is better)
Translates to: FNNTENSSSRNDREALLANTRLC*HAEGRQ
Trigger: CTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATT...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR-3UTR GCA 90 bp GGAAGCTTGCAACGAGGAAGGCTGGCAATAAATGTACATTATTATGTCTCCAGAAGTCTACATCCACGATaGTGGGAAAGAAAAACCAAG +
Preference number: 2 (lower is better)
Translates to: GSLQRGRLAINVHYYVSRSLHPR*WERKTK
Trigger: CTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACT...TCTGGAGACATAATAATGTACATTTATTGCCAGCCTTCCTCGTTGCAAGCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR CAA 90 bp ACTATAGTTGTAGGTAGTCCATCCATTAGGGAAGTGGTGGCTTGTTaGATTGGATTCCTTTTTATTCACTGTAATGAGATTTTTGCTTGG +
Preference number: 2 (lower is better)
Translates to: TIVVGSPSIREVVAC*IGFLFIHCNEIFAW
Trigger: CCAAGCAAAAATCTCATTACAGTGAATAAAAAGGAATCCAATCAAACAAGCCACCACTTCCCTAATGGATGGACTACCTACAACTATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR GCA 72 bp CTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTCTaGCTGGTCAGAGCCTGCACACGAGTGCAGAGGGCT +
Preference number: 3 (lower is better)
Translates to: LQGSPSLPSCLF*LVRACTRVQRA
Trigger: AGCCCTCTGCACTCGTGTGCAGGCTCTGACCAGGCAGAACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
3UTR CCA 72 bp AGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTCTGCCTaGTCAGAGCCTGCACACGAGTGCAGAGGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: RGLLPSPLACSA*SEPAHECRGLP
Trigger: AGGGAGCCCTCTGCACTCGTGTGCAGGCTCTGACCAGGCAGAACAGGCAAGAGGGGAGGGAAGGAGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
3UTR CCA 72 bp CCTGGACCTCAGATCCCTTGTGATGGGAAGCCCACTTaGGGAGTAGAACCCTTGGCAATACCGACTCAGGGT +
Preference number: 3 (lower is better)
Translates to: PGPQIPCDGKPT*GVEPLAIPTQG
Trigger: ACCCTGAGTCGGTATTGCCAAGGGTTCTACTCCCCAAGTGGGCTTCCCATCACAAGGGATCTGAGGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR CCA 72 bp GGCCCTGCTGGCCTGACCCAAAGTGAGATGATCGTGTaGCATTCAGGGGGTGTTTCTGGCAGTGCTGTTACT +
Preference number: 3 (lower is better)
Translates to: GPAGLTQSEMIV*HSGGVSGSAVT
Trigger: AGTAACAGCACTGCCAGAAACACCCCCTGAATGCCACACGATCATCTCACTTTGGGTCAGGCCAGCAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR-3UTR CAA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCAAGCAGAACATTTGTATaGAGTGGCACGTGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSSRTFV*SGTWAE
Trigger: CTCAGCCCACGTGCCACTCAATACAAATGTTCTGCT...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR TCA 72 bp GTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTaGCATGCAGAAGGAAGACAGCTCTGTCCCACCAAC +
Preference number: 3 (lower is better)
Translates to: VTDTGGSNTRLC*HAEGRQLCPTN
Trigger: GTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
3UTR TCA 72 bp GAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTaGAGTTTCAGAATAAGCAGCTTATTCTGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: EGSLREGRARGS*SFRISSLFCGL
Trigger: GAGGCCACAGAATAAGCTGCTTATTCTGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR CAA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAGCAGAACATTTGTATaGAGTGGCACGTGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPSRTFV*SGTWAE
Trigger: CTCAGCCCACGTGCCACTCAATACAAATGTTCTGCT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
3UTR TCA 72 bp ATAGGAGAGGTTGCCAGTTGGTTGCTTTTGGGTAGATaGGGCTCTCTGTCTCTCTCAGCAGAGCCATGTGGG +
Preference number: 3 (lower is better)
Translates to: IGEVASWLLLGR*GSLSLSAEPCG
Trigger: CCCACATGGCTCTGCTGAGAGAGACAGAGAGCCTCATCTACCCAAAAGCAACCAACTGGCAACCTCTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528651.1
3UTR CCA 72 bp AGGTGCGAGAGTCAGCATAGTGCATTTGCTGCAGGGTaGAAGCTTGCAACGAGGAAGGCTGGCAATAAATGT +
Preference number: 3 (lower is better)
Translates to: RCESQHSAFAAG*KLATRKAGNKC
Trigger: ACATTTATTGCCAGCCTTCCTCGTTGCAAGCTTCCACCCTGCAGCAAATGCACTATGCTGACTCTCGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR TCA 72 bp ATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTaGTGCCACTCAAAGCCATTCTCAGTCTACATCCAC +
Preference number: 3 (lower is better)
Translates to: IYPRHPPTAVRS*CHSKPFSVYIH
Trigger: GTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR TCA 72 bp GATGATTCTCATCCACTGAGGAAATTACATTTCACCTaGACTCCCCAGTCCCTCAGGCAATGGCCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: DDSHPLRKLHFT*TPQSLRQWPAE
Trigger: CTCTGCTGGCCATTGCCTGAGGGACTGGGGAGTTCAGGTGAAATGTAATTTCCTCAGTGGATGAGAATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR-3UTR CAA 90 bp CCTCCTATTGTCAGTGTCCCCAAATGCCTGTTAAAATTTGGCACTTGTGAGTCAGTGCTTGTCAGCAGTTaGCCAGCTGGCTCCGAAGTT +
Preference number: 3 (lower is better)
Translates to: PPIVSVPKCLLKFGTCESVLVSS*PAGSEV
Trigger: AACTTCGGAGCCAGCTGGCAAACTGCTGACAAGCAC...TGACTCACAAGTGCCAAATTTTAACAGGCATTTGGGGACACTGACAATAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
3UTR-3UTR CAA 90 bp CCTCCTATTGTCAGTGTCCCCAAATGCCTGTTAAAATTTGGCACTTGTGAGTCATCTGAGCATGTGTGCTaGTCAGCAGTTTGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: PPIVSVPKCLLKFGTCESSEHVC*SAVCQL
Trigger: CAGCTGGCAAACTGCTGACAAGCACACATGCTCAGA...TGACTCACAAGTGCCAAATTTTAACAGGCATTTGGGGACACTGACAATAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
3UTR CCA 72 bp AGGAAGCTGAAGTTTCAGAATAAGCAGCTTATTCTGTaGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: RKLKFQNKQLIL*PPFHYRLLEEE
Trigger: CTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAAACTTCAGCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR-3UTR CAA 90 bp GGAAGCTTGCAACGAGGAAGGCTGGCAATAAATGTACATTATTATGTCTCCAGAAGCAGAACATTTGTATaGAGTGGCACGTGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: GSLQRGRLAINVHYYVSRSRTFV*SGTWAE
Trigger: CTCAGCCCACGTGCCACTCAATACAAATGTTCTGCT...TCTGGAGACATAATAATGTACATTTATTGCCAGCCTTCCTCGTTGCAAGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR TCA 72 bp GGAGTAGAACCCTTGGCAATACCGACTCAGGGTTGGTaGAATCGCCTTTTCATGACAATTGATGATTCTCAT +
Preference number: 3 (lower is better)
Translates to: GVEPLAIPTQGW*NRLFMTIDDSH
Trigger: ATGAGAATCATCAATTGTCATGAAAAGGCGATTTCACCAACCCTGAGTCGGTATTGCCAAGGGTTCTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTCATCTACATCCTCCTaGGGCCCCGCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: SRWVEGACRGLLPSPLACSSTSS*GPAARP
Trigger: GGGCCGTGCCGCGGGGCCGCAGGAGGATGTAGATGA...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCGGCGACGCTGCCCCTTaGGGCCTCCTTGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCGDAAP*GLLADV
Trigger: CACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCC...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCGGCGACGCTGCCCCTTaGGGCCTCCTTGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: VSRWVEGACRGLLPSPLAGDAAP*GLLADV
Trigger: CACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCC...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCCCCAGAAGGACAGGTaGGTCTCACCTAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCPQKDR*VSPRLT
Trigger: GGTCAGCCTAGGTGAGACTCACCTGTCCTTCTGGGG...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGCCTGGTCAGAGCCTaGACACGAGTGCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSRWVEGACRGLLPSPLACLVRA*TRVQRA
Trigger: AGCCCTCTGCACTCGTGTGCAGGCTCTGACCAGGCA...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTCGACCAGCTTCAGGCTaGAACGTGCCCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVRPASG*NVPRAQ
Trigger: CTGTGCCCTGGGCACGTTCCAGCCTGAAGCTGGTCG...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGACAGCACACGTTTCCATaGGCAGCCGCCGTTTCACCC +
Preference number: 4 (lower is better)
Translates to: QSLHTSAEGSLREGRARGQHTFP*AAAVSP
Trigger: GGGTGAAACGGCGGCTGCTCATGGAAACGTGTGCTG...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCATGTGCCAGGGTGGTTaGTGCAGCTGTGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: VSRWVEGACRGLLPSPLAMCQGG*CSCGHR
Trigger: CCTGTGACCACAGCTGCATCAACCACCCTGGCACAT...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTTCGTCACAGGAGTGCTaGCACCCACCGTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEASSQEC*HPPFPW
Trigger: CCATGGGAACGGTGGGTGCCAGCACTCCTGTGACGA...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTCGTCACAGGAGTGCTaGCACCCACCGTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: SRWVEGACRGLLPSPLACSSQEC*HPPFPW
Trigger: CCATGGGAACGGTGGGTGCCAGCACTCCTGTGACGA...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAATGTGCCAGGGTGGTTaGTGCAGCTGTGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: QSLHTSAEGSLREGRARGMCQGG*CSCGHR
Trigger: CCTGTGACCACAGCTGCATCAACCACCCTGGCACAT...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTCTTTGACCTGGAGGTaGAGGCGATGGGGCGTTCGT +
Preference number: 4 (lower is better)
Translates to: SRWVEGACRGLLPSPLACSLTWR*RRWGVR
Trigger: ACGAACGCCCCATCGCCTTCACCTCCAGGTCAAAGA...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTGTATCGTCACAGGAGTaGTGGCACCCACCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVVSSQE*WHPPFP
Trigger: TGGGAACGGTGGGTGCCAGCACTCCTGTGACGATAC...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCCACGTCGAGGTTCATaGCTGAGAGCTGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCPRRGS*LRAGGE
Trigger: TTCACCTCCAGCTCTCAGGCATGAACCTCGACGTGG...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGACTTGCCTGTTCTGCCTaGTCAGAGCCTGCACACGAG +
Preference number: 4 (lower is better)
Translates to: QSLHTSAEGSLREGRARGLACSA*SEPAHE
Trigger: CTCGTGTGCAGGCTCTGACCAGGCAGAACAGGCAAG...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTCTTGCCTGTTCTGCCTaGTCAGAGCCTGCACACGAG +
Preference number: 4 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVLACSA*SEPAHE
Trigger: CTCGTGTGCAGGCTCTGACCAGGCAGAACAGGCAAG...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCGAGTGGCACGTGGGCTaGGTCATTTGTAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCEWHVG*VICKVS
Trigger: TGAGACCTTACAAATGACTCAGCCCACGTGCCACTC...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTCATCTACATCCTCCTaGGGCCCCGCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPSSTSS*GPAARP
Trigger: GGGCCGTGCCGCGGGGCCGCAGGAGGATGTAGATGA...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCGGGTGTACCCTCGGTTaGAAGCACAAGCAAATGTGC +
Preference number: 4 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCGCTLG*KHKQMC
Trigger: GCACATTTGCTTGTGCTTGCAACCGAGGGTACACCC...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCCGCGACCCCCATGGATaGCTCAGCGGTTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPRDPHG*LSGCGQ
Trigger: CTGCCCGCAACCGCTGAGCCATCCATGGGGGTCGCG...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGGCCCGCGACCCCCATaGATGGCTCAGCGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLGPRPP*MAQRLR
Trigger: CCGCAACCGCTGAGCCATCCATGGGGGTCGCGGGCC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGTCACGTATGGGACCTaGAACCCTCTAGCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAVTYGT*NPLALF
Trigger: GAACAGCGCTAGAGGGTTCCAGGTCCCATACGTGAC...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACAGGGACACACGGGGTaGCACACTTGTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPQGHTG*HTCGQE
Trigger: CTCCTGCCCACAAGTGTGTCACCCCGTGTGTCCCTG...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCACCTGAGAGCTGGAGGTaGAACTGCTCCCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSPESWR*NCSLWT
Trigger: CGTCCACAGGGAGCAGTTTCACCTCCAGCTCTCAGG...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCAATACCCGACTGTGCTaGCATGCAGAAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: VSRWVEGACRGLLPSPLANTRLC*HAEGRQ
Trigger: CTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATT...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCGGCGACGCTGCCCCTTaGGGCCTCCTTGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPGDAAP*GLLADV
Trigger: CACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCC...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGTGCATCTTGTACTGTaGATGGCAGCTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAVHLVL*MAAALW
Trigger: CCAGAGTGCAGCTGCCATCCACAGTACAAGATGCAC...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTTTGGTGTCTCCACAGTaGGTGAAGCCATACAGGGTG +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEALVSPQ*VKPYRV
Trigger: CACCCTGTATGGCTTCACCCACTGTGGAGACACCAA...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCACACTCGGTGTTGGCTaGGTAATTGCCTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCTLGVG*VIAWVV
Trigger: AACTACCCAGGCAATTACCCAGCCAACACCGAGTGT...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTACGTACACTCGGTGTTaGCTGGGTAATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEATYTRC*LGNCLG
Trigger: ACCCAGGCAATTACCCAGCCAACACCGAGTGTACGT...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCTGAGAGCTGGAGGTaGAACTGCTCCCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMPESWR*NCSLWT
Trigger: CGTCCACAGGGAGCAGTTTCACCTCCAGCTCTCAGG...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTTCCCAGCCCTGCAACTaGCACATTGGTTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVSQPCN*HIGFLH
Trigger: ATGCAGAAAACCAATGTGTCAGTTGCAGGGCTGGGA...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTTCCCAGCCCTGCAACTaGCACATTGGTTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEASQPCN*HIGFLH
Trigger: ATGCAGAAAACCAATGTGTCAGTTGCAGGGCTGGGA...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTCTGTCTCTCTCAGCAGAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGTCTTTGACCTGGAGGTaGAGGCGATGGGGCGTTCGT +
Preference number: 4 (lower is better)
Translates to: ALCLSQQSHVGGIWVHPKSLTWR*RRWGVR
Trigger: ACGAACGCCCCATCGCCTTCACCTCCAGGTCAAAGA...CTTGGGGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAGAGAGACAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR GCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAACTCACAGGCGACGCTaGCCCTTGGGGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLTHRRR*PLGPPC
Trigger: GCAAGGAGGCCCCAAGGGGCAGCGTCGCCTGTGAGT...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGACTGTGGATGGCAGCTaGACTCTGGGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMTVDGS*TLGHRL
Trigger: CAGCCGATGGCCCAGAGTGCAGCTGCCATCCACAGT...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCAACTGTGGATGGCAGCTaGACTCTGGGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPTVDGS*TLGHRL
Trigger: CAGCCGATGGCCCAGAGTGCAGCTGCCATCCACAGT...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTCTCCTCCCATCTGTGTaGATCTTGTACTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SRWVEGACRGLLPSPLACLLPSV*ILYCGW
Trigger: CCATCCACAGTACAAGATGCACACAGATGGGAGGAG...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTATCCAACAGGACAACTaGAGTGGACACCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAIQQDN*SGHLSK
Trigger: CTTCGACAGGTGTCCACTGCAGTTGTCCTGTTGGAT...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCAGGGGCTCCTGGGACTTaGTTGCCAGAGCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSGAPGT*LPELHV
Trigger: TACATGCAGCTCTGGCAAGCAAGTCCCAGGAGCCCC...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTCGGTTCGCTTTACGATaGAGCTCAGGTCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: SRWVEGACRGLLPSPLACRFALR*SSGHKK
Trigger: CTTCTTGTGACCTGAGCTGCATCGTAAAGCGAACCG...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTCAGTCATCTAGCCCTTaGGCACACTCATCTACATCC +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAQSSSP*AHSSTS
Trigger: GGATGTAGATGAGTGTGCCCAAGGGCTAGATGACTG...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCACAGGGCGTCGGCATaGCAGTCATCTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMHRASA*QSSSPW
Trigger: CCAAGGGCTAGATGACTGCCATGCCGACGCCCTGTG...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCGTCTTCCCATCCAACTaGAGAGTGAATCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: VSRWVEGACRGLLPSPLAVFPSN*RVNPTG
Trigger: TCCTGTTGGATTCACTCTCCAGTTGGATGGGAAGAC...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGGTTGATGCAGCTGTaGTCACAGGTCCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: VSRWVEGACRGLLPSPLAWLMQL*SQVLSK
Trigger: TTTGGATAGGACCTGTGACCACAGCTGCATCAACCA...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCTCCTGGTCTTGGGCATaGTTCACAAGTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCSWSWA*FTSHLS
Trigger: GGACAAATGACTTGTGAACCATGCCCAAGACCAGGA...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCTTGTATCACACAGGCTaGAGAAGGCTGTGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCLYHTG*RRLWRN
Trigger: GTTTCTCCACAGCCTTCTCCAGCCTGTGTGATACAA...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGAGGTGGGTGTGTTCTaGCACAGGGCGTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLEVGVF*HRASAW
Trigger: CCATGCCGACGCCCTGTGTCAGAACACACCCACCTC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGAGGTGGGTGTGTTCTaGCACAGGGCGTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLEVGVF*HRASAW
Trigger: CCATGCCGACGCCCTGTGTCAGAACACACCCACCTC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGGACACAGCCTCCATTaGGCTCATTTCCACATTCAT +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAGHSLH*AHFHIH
Trigger: ATGAATGTGGAAATGAGCTCAATGGAGGCTGTGTCC...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTCGTCATGAGCCAACATaGAGCCATCAAAACAAGTGC +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEARHEPT*SHQNKC
Trigger: GCACTTGTTTTGATGGCTTCATGTTGGCTCATGACG...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCATGTCTCCACAGTGGGTaGAGCCATACAGGGTGTACC +
Preference number: 4 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSCLHSG*SHTGCT
Trigger: GGTACACCCTGTATGGCTTCACCCACTGTGGAGACA...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGGGCCCCTTGCAGTCCTaGAGAGAGGTGAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMGPLQS*REVNAR
Trigger: TCTGGCATTCACCTCTCTTCAGGACTGCAAGGGGCC...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGTCATCTACATCCTCCTaGGGCCCCGCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKSSTSS*GPAARP
Trigger: GGGCCGTGCCGCGGGGCCGCAGGAGGATGTAGATGA...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAACTCACAGGCGACGCTaGCCCTTGGGGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTTHRRR*PLGPPC
Trigger: GCAAGGAGGCCCCAAGGGGCAGCGTCGCCTGTGAGT...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTGGTTACAGGTCAAGATaGAGTCTCTCTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVGYRSR*SLSGSW
Trigger: CCAAGAACCAGAGAGACTGCATCTTGACCTGTAACC...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCCCACTCTTACCGCAGTaGAGGGACACACGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPPLLPQ*RDTRGD
Trigger: GTCACCCCGTGTGTCCCTGCACTGCGGTAAGAGTGG...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTAATGCAGCGTTCTCGTaGTCCATCATAATAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEANAAFS*SIIIGP
Trigger: GGGACCTATTATGATGGAGCACGAGAACGCTGCATT...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTTGTTGGCTGGGTAATTaGCTGGGTAGTTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEACWLGN*LGSLGI
Trigger: AATCCCCAAACTACCCAGGCAATTACCCAGCCAACA...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATGGCGACGCTGCCCCTTaGGGCCTCCTTGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHGDAAP*GLLADV
Trigger: CACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCC...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATCGGCCAGGGGCTCCTaGGACTTGCTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLSARGS*DLLARA
Trigger: AGCTCTGGCAAGCAAGTCCCAGGAGCCCCTGGCCGA...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCCCTGATGTTTGGTaGCAAGGCCTCCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPLPDVW*QGLLHR
Trigger: CCTGTGGAGGAGGCCTTGCCACCAAACATCAGGGAG...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GCTCTCTGTCTCTCTCAGCAGAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGGTCACGTATGGGACCTaGAACCCTCTAGCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ALCLSQQSHVGGIWVHPKVTYGT*NPLALF
Trigger: GAACAGCGCTAGAGGGTTCCAGGTCCCATACGTGAC...CTTGGGGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAGAGAGACAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CCA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTATCATATGTCACGTATaGGACCTGGAACCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVIICHV*DLEPSS
Trigger: GCTAGAGGGTTCCAGGTCCCATACGTGACATATGAT...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTATCATATGTCACGTATaGGACCTGGAACCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SRWVEGACRGLLPSPLACIICHV*DLEPSS
Trigger: GCTAGAGGGTTCCAGGTCCCATACGTGACATATGAT...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCAAGCAGCTTATTCTGTaGCCTCCTTTCCACTACAGA +
Preference number: 4 (lower is better)
Translates to: VSRWVEGACRGLLPSPLAKQLIL*PPFHYR
Trigger: TCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTT...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTTGCCTGTTCTGCCTaGTCAGAGCCTGCACACGAG +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPLACSA*SEPAHE
Trigger: CTCGTGTGCAGGCTCTGACCAGGCAGAACAGGCAAG...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TGTCCACGGAGCAGAGTCCGTCTCTCACATTTGAGACTGGGGAAGGAAGGCATACAGCACACGTTTCCATaGGCAGCCGCCGTTTCACCC +
Preference number: 4 (lower is better)
Translates to: CPRSRVRLSHLRLGKEGIQHTFP*AAAVSP
Trigger: GGGTGAAACGGCGGCTGCTCATGGAAACGTGTGCTG...TATGCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGACTCTGCTCCGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR TCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCATGTCTCCACAGTGGGTaGAGCCATACAGGGTGTACC +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPCLHSG*SHTGCT
Trigger: GGTACACCCTGTATGGCTTCACCCACTGTGGAGACA...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACACAGGGACACACGGGGTaGCACACTTGTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTQGHTG*HTCGQE
Trigger: CTCCTGCCCACAAGTGTGTCACCCCGTGTGTCCCTG...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTCAGGGACACACGGGGTaGCACACTTGTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAQGHTG*HTCGQE
Trigger: CTCCTGCCCACAAGTGTGTCACCCCGTGTGTCCCTG...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCCCTGAGAGCTGGAGGTaGAACTGCTCCCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLPESWR*NCSLWT
Trigger: CGTCCACAGGGAGCAGTTTCACCTCCAGCTCTCAGG...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCCCCCAGAAGGACAGGTaGGTCTCACCTAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLPQKDR*VSPRLT
Trigger: GGTCAGCCTAGGTGAGACTCACCTGTCCTTCTGGGG...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCAACGTTGACACAGGTATaGTGGCAGCCGCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSTLTQV*WQPPLF
Trigger: GAACAATGGCGGCTGCCAGCATACCTGTGTCAACGT...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATCCACTCTTACCGCAGTaGAGGGACACACGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHPLLPQ*RDTRGD
Trigger: GTCACCCCGTGTGTCCCTGCACTGCGGTAAGAGTGG...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACGTCGAGGTTCATaGCTGAGAGCTGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMPRRGS*LRAGGE
Trigger: TTCACCTCCAGCTCTCAGGCATGAACCTCGACGTGG...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACTTCAGGCTGGAACGTaGCCAGGGCACAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AHSSEKLMPLKAILSLHPLQAGT*PGHRAG
Trigger: GCCAGCTCTGTGCCCTGGGCACGTTCCAGCCTGAAG...TGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGACAGATGCATAGAGCCTaGCATCTCGAACTATGTCTT +
Preference number: 4 (lower is better)
Translates to: QSLHTSAEGSLREGRARGQMHRA*HLELCL
Trigger: AAGACATAGTTCGAGATGGCAGGCTCTATGCATCTG...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAGGCCCGCGACCCCCATaGATGGCTCAGCGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKGPRPP*MAQRLR
Trigger: CCGCAACCGCTGAGCCATCCATGGGGGTCGCGGGCC...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCATGGCAGCTGCACTCTaGGCCATCGGCTGTATCGTC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPMAAAL*AIGCIV
Trigger: GACGATACAGCCGATGGCCCAGAGTGCAGCTGCCAT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCAATCTTGTACTGTGGATaGCAGCTGCACTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSILYCG*QLHSGP
Trigger: TGGCCCAGAGTGCAGCTGCCATCCACAGTACAAGAT...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTCCTCCATTGCGGGTCTaGCACTCATCAATATCTTTA +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAPPLRV*HSSISL
Trigger: TAAAGATATTGATGAGTGCCAGACCCGCAATGGAGG...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATCGGCCAGGGGCTCCTaGGACTTGCTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTSARGS*DLLARA
Trigger: AGCTCTGGCAAGCAAGTCCCAGGAGCCCCTGGCCGA...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCAGAATTTCCTGGTCTTaGGCATGGTTCACAAGTCAT +
Preference number: 4 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCRISWS*AWFTSH
Trigger: ATGACTTGTGAACCATGCCCAAGACCAGGAAATTCT...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCGAATACATCGGTGAGTaGTGGTGTTGTAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: VSRWVEGACRGLLPSPLAEYIGE*WCCRNV
Trigger: GACATTTCTACAACACCACCACTCACCGATGTATTC...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTAAGCAGCTTATTCTGTaGCCTCCTTTCCACTACAGA +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAKQLIL*PPFHYR
Trigger: TCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTT...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTAAGCAGCTTATTCTGTaGCCTCCTTTCCACTACAGA +
Preference number: 4 (lower is better)
Translates to: SRWVEGACRGLLPSPLACKQLIL*PPFHYR
Trigger: TCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTT...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp TGTCTCTCTCAGCAGAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGAGATACCTCAGCAGAGCCATGTaGGAGGCATTTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: CLSQQSHVGGIWVHPKRYLSRAM*EAFGST
Trigger: GGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAG...GTATCTCTTGGGGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAGAGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528651.1
3UTR CAA 72 bp GGCACAGCTGAAGGTGCGAGAGTCAGCATAGTGCATTaGCTGCAGGGTGGAAGCTTGCAACGAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GTAEGARVSIVH*LQGGSLQRGRL
Trigger: CAGCCTTCCTCGTTGCAAGCTTCCACCCTGCAGCAAATGCACTATGCTGACTCTCGCACCTTCAGCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR TCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGGAGGTGGGTGTGTTCTaGCACAGGGCGTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMEVGVF*HRASAW
Trigger: CCATGCCGACGCCCTGTGTCAGAACACACCCACCTC...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCAATCCCCATCCACCACTaGTGTGGTGTTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPIPIHH*CGVALC
Trigger: ACAGAGAGCAACACCACATCAGTGGTGGATGGGGAT...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTCAGCACACGTTTCCATaGGCAGCCGCCGTTTCACCC +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAQHTFP*AAAVSP
Trigger: GGGTGAAACGGCGGCTGCTCATGGAAACGTGTGCTG...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTATGTTTTTGCAGAAATaGTCACAACCTCCATTGCGG +
Preference number: 4 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVMFLQK*SQPPLR
Trigger: CCGCAATGGAGGTTGTGATCATTTCTGCAAAAACAT...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGGACAGCCTCCGTTGTTaGTGCTGCACTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMDSLRC*CCTHWC
Trigger: ACACCAATGAGTGCAGCATCAACAACGGAGGCTGTC...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACACCTGAGAGCTGGAGGTaGAACTGCTCCCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTPESWR*NCSLWT
Trigger: CGTCCACAGGGAGCAGTTTCACCTCCAGCTCTCAGG...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAGTAGAAATGTCCAGGTaGACATTGAACTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QSLHTSAEGSLREGRARGVEMSR*TLNSGF
Trigger: GAAACCAGAGTTCAATGTTCACCTGGACATTTCTAC...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAGAACTATGTCTTCAATaGGTTCCTGGTAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QSLHTSAEGSLREGRARGELCLQ*VPGSPH
Trigger: ATGAGGACTACCAGGAACTCATTGAAGACATAGTTC...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCGAGTCTCACCTAGGCTaGCCAAAGTCCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKAESHLG*PKSSSA
Trigger: GGCTGAGCTGGACTTTGGTCAGCCTAGGTGAGACTC...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAGGCTGTGGAGAAACTaGGTCCTCCCAGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPRLWRN*VLPGLK
Trigger: CTTGAGACCTGGGAGGACTCAGTTTCTCCACAGCCT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGCTCAAAACCAGGCCTaGACTCACAGGCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTAQNQA*THRRRC
Trigger: GCAGCGTCGCCTGTGAGTGCAGGCCTGGTTTTGAGC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTGCTCAAAACCAGGCCTaGACTCACAGGCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAAQNQA*THRRRC
Trigger: GCAGCGTCGCCTGTGAGTGCAGGCCTGGTTTTGAGC...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTGCCCACGATGTTTTTaGAGAAATGATCACAACCTC +
Preference number: 4 (lower is better)
Translates to: SRWVEGACRGLLPSPLACCPRCF*RNDHNL
Trigger: GAGGTTGTGATCATTTCTGCAAAAACATCGTGGGCA...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGGGGCTCCTGGGACTTaGTTGCCAGAGCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLGAPGT*LPELHV
Trigger: TACATGCAGCTCTGGCAAGCAAGTCCCAGGAGCCCC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTCATTTGGACATAAAATaGAGCGTTCTCGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAHLDIK*SVLVLH
Trigger: ATGGAGCACGAGAACGCTGCATTTTATGTCCAAATG...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTAGTCTACATCCACGATaGTGGGAAAGAAAAACCAAG +
Preference number: 4 (lower is better)
Translates to: ACTRVQRAPLERAGLEEASLHPR*WERKTK
Trigger: CTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACT...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TGTCCACGGAGCAGAGTCCGTCTCTCACATTTGAGACTGGGGAAGGAAGGCATACACCCTTCAAGGGGCTaGTCATGTCCACGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: CPRSRVRLSHLRLGKEGIHPSRG*SCPRSR
Trigger: TCTGCTCCGTGGACATGAGCAGCCCCTTGAAGGGTG...TATGCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGACTCTGCTCCGTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCGGCCCGCGACCCCCATaGATGGCTCAGCGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFGPRPP*MAQRLR
Trigger: CCGCAACCGCTGAGCCATCCATGGGGGTCGCGGGCC...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACACAGGGCGTCGGCATaGCAGTCATCTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AHSSEKLMPLKAILSLHPHRASA*QSSSPW
Trigger: CCAAGGGCTAGATGACTGCCATGCCGACGCCCTGTG...TGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGCGACCAGCTTCAGGCTaGAACGTGCCCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMRPASG*NVPRAQ
Trigger: CTGTGCCCTGGGCACGTTCCAGCCTGAAGCTGGTCG...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTCTACATCCACGATGCTaGGAAAGAAAAACCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SRWVEGACRGLLPSPLACLHPRC*ERKTKF
Trigger: GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAG...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCATCCCCATCCACCACTaGTGTGGTGTTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPIPIHH*CGVALC
Trigger: ACAGAGAGCAACACCACATCAGTGGTGGATGGGGAT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATGTGGACGGCCTTTCTaGGCGTGCGGATGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTCGRPF*ACGWLY
Trigger: GTAAAGCCATCCGCACGCTCAGAAAGGCCGTCCACA...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATCATTGGTTTTCTGCATaGCCCTGGCCCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHHWFSA*PWPTPQ
Trigger: CTGTGGAGTGGGCCAGGGTCATGCAGAAAACCAATG...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATCTTTGACCTGGAGGTaGAGGCGATGGGGCGTTCGT +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTSLTWR*RRWGVR
Trigger: ACGAACGCCCCATCGCCTTCACCTCCAGGTCAAAGA...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCAAATCCACAGCTTCTTTaGCCTGGAGGTGAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPNPQLL*PGGEGD
Trigger: ATCGCCTTCACCTCCAGGTCAAAGAAGCTGTGGATT...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGAATCCACAGCTTCTTTaGCCTGGAGGTGAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMNPQLL*PGGEGD
Trigger: ATCGCCTTCACCTCCAGGTCAAAGAAGCTGTGGATT...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGGCAGAACATTTGTATTaGGTGGCACGTGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMAEHLY*VARGLS
Trigger: ACTCAGCCCACGTGCCACTCAATACAAATGTTCTGC...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCAAATACCCGACTGTGCTaGCATGCAGAAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPNTRLC*HAEGRQ
Trigger: CTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATT...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTGAGTCTCACCTAGGCTaGCCAAAGTCCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAESHLG*PKSSSA
Trigger: GGCTGAGCTGGACTTTGGTCAGCCTAGGTGAGACTC...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGCCCCAGAAGGACAGGTaGGTCTCACCTAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKPQKDR*VSPRLT
Trigger: GGTCAGCCTAGGTGAGACTCACCTGTCCTTCTGGGG...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTGGCCCCTTGCAGTCCTaGAGAGAGGTGAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAGPLQS*REVNAR
Trigger: TCTGGCATTCACCTCTCTTCAGGACTGCAAGGGGCC...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGTCAGAGGGCACAGCTaGAGGTGCGAGAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTVRGHS*RCESQH
Trigger: ATGCTGACTCTCGCACCTTCAGCTGTGCCCTCTGAC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTAGCCATCAAAACAAGTaGAACGATAATTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVSHQNK*NDNCLE
Trigger: TTCCAGGCAATTATCGTTGCACTTGTTTTGATGGCT...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATACTCACAGGCGACGCTaGCCCTTGGGGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYTHRRR*PLGPPC
Trigger: GCAAGGAGGCCCCAAGGGGCAGCGTCGCCTGTGAGT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGGCTCAAAACCAGGCCTaGACTCACAGGCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMAQNQA*THRRRC
Trigger: GCAGCGTCGCCTGTGAGTGCAGGCCTGGTTTTGAGC...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGTATCGTCACAGGAGTaGTGGCACCCACCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTVSSQE*WHPPFP
Trigger: TGGGAACGGTGGGTGCCAGCACTCCTGTGACGATAC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCGGGTGTACCCTCGGTTaGAAGCACAAGCAAATGTGC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPGCTLG*KHKQMC
Trigger: GCACATTTGCTTGTGCTTGCAACCGAGGGTACACCC...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTACCACGTCGAGGTTCATaGCTGAGAGCTGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLPRRGS*LRAGGE
Trigger: TTCACCTCCAGCTCTCAGGCATGAACCTCGACGTGG...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCGACACATTGGTTTTCTaGATGACCCTGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPDTLVF*MTLAHS
Trigger: GGAGTGGGCCAGGGTCATGCAGAAAACCAATGTGTC...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCATGCCTGGTCAGAGCCTaGACACGAGTGCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPCLVRA*TRVQRA
Trigger: AGCCCTCTGCACTCGTGTGCAGGCTCTGACCAGGCA...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGTGCCTGGTCAGAGCCTaGACACGAGTGCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKCLVRA*TRVQRA
Trigger: AGCCCTCTGCACTCGTGTGCAGGCTCTGACCAGGCA...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCACCACATTGGTTTTCTaGATGACCCTGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPTTLVF*MTLAHS
Trigger: GGAGTGGGCCAGGGTCATGCAGAAAACCAATGTGGT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520467.5
CDS-3UTR GCA 90 bp TGTCCACGGAGCAGAGTCCGTCTCTCACATTTGAGACTGGGGAAGGAAGGCATATGCAGGGTGGAAGCTTaGAACGAGGAAGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: CPRSRVRLSHLRLGKEGICRVEA*NEEGWQ
Trigger: TTGCCAGCCTTCCTCGTTGCAAGCTTCCACCCTGCA...TATGCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGACTCTGCTCCGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACAGTCATCTAGCCCTTaGGCACACTCATCTACATCC +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPQSSSP*AHSSTS
Trigger: GGATGTAGATGAGTGTGCCCAAGGGCTAGATGACTG...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTTGACACAGGTATGCTaGCAGCCGCCATTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPLTQVC*QPPLFS
Trigger: GGAGAACAATGGCGGCTGCCAGCATACCTGTGTCAA...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAATGGCAGCTGCACTCTaGGCCATCGGCTGTATCGTC +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTMAAAL*AIGCIV
Trigger: GACGATACAGCCGATGGCCCAGAGTGCAGCTGCCAT...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGATGTCCTTCCTCATTTTaGAAGGTTCCATTTGGACAT +
Preference number: 4 (lower is better)
Translates to: QSLHTSAEGSLREGRARGCPSSF*KVPFGH
Trigger: ATGTCCAAATGGAACCTTCCAAAATGAGGAAGGACA...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCTGGTATGTTCCCACTaGGCAACGAATACATCGGTG +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMLVCSH*ATNTSV
Trigger: CACCGATGTATTCGTTGCCCAGTGGGAACATACCAG...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCAGGCTGGGTAATTGCCTaGGTAGTTTGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSGWVIA*VVWGFN
Trigger: ATTGAATCCCCAAACTACCCAGGCAATTACCCAGCC...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp CTCTGTCTCTCTCAGCAGAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGAGAACACTCGGTGTTGGCTaGGTAATTGCCTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: LCLSQQSHVGGIWVHPKRTLGVG*VIAWVV
Trigger: AACTACCCAGGCAATTACCCAGCCAACACCGAGTGT...TCTCTTGGGGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAGAGAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGACACTCGGTGTTGGCTaGGTAATTGCCTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMTLGVG*VIAWVV
Trigger: AACTACCCAGGCAATTACCCAGCCAACACCGAGTGT...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTATGTTGTCACAGAATTaGATGAAGAGGTTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVMLSQN*MKRFSA
Trigger: TGCGGAAAACCTCTTCATCCAATTCTGTGACAACAT...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGTCACGTATGGGACCTaGAACCCTCTAGCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLVTYGT*NPLALF
Trigger: GAACAGCGCTAGAGGGTTCCAGGTCCCATACGTGAC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGTCACGTATGGGACCTaGAACCCTCTAGCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLVTYGT*NPLALF
Trigger: GAACAGCGCTAGAGGGTTCCAGGTCCCATACGTGAC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGATGGGAAGCCCACTTaGGGAGTAGAACCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLDGKPT*GVEPLA
Trigger: TGCCAAGGGTTCTACTCCCCAAGTGGGCTTCCCATC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR CAA 72 bp TGCTCATGTCCACGGAGCAGAGTCCGTCTCTCACATTaGAGACTGGGGAAGGAAGGCATACATGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: CSCPRSRVRLSH*RLGKEGIHDRL
Trigger: CAGCCTGTCATGTATGCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGACTCTGCTCCGTGGACATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR TCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAATCCCCATCCACCACTaGTGTGGTGTTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLIPIHH*CGVALC
Trigger: ACAGAGAGCAACACCACATCAGTGGTGGATGGGGAT...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGATGTGCCAGGGTGGTTaGTGCAGCTGTGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMMCQGG*CSCGHR
Trigger: CCTGTGACCACAGCTGCATCAACCACCCTGGCACAT...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTTGTCTCCACAGTGGGTaGAGCCATACAGGGTGTACC +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWACLHSG*SHTGCT
Trigger: GGTACACCCTGTATGGCTTCACCCACTGTGGAGACA...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATGTCTCCACAGTGGGTaGAGCCATACAGGGTGTACC +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTCLHSG*SHTGCT
Trigger: GGTACACCCTGTATGGCTTCACCCACTGTGGAGACA...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATGACAGCCTCCGTTGTTaGTGCTGCACTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHDSLRC*CCTHWC
Trigger: ACACCAATGAGTGCAGCATCAACAACGGAGGCTGTC...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGACAGCCTCCGTTGTTaGTGCTGCACTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLDSLRC*CCTHWC
Trigger: ACACCAATGAGTGCAGCATCAACAACGGAGGCTGTC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGTGCCAGAGTGACATCTaGGGAAGCACCCGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMCQSDI*GSTRLL
Trigger: GAGGAGACGGGTGCTTCCTCAGATGTCACTCTGGCA...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGTGTGGACGGCCTTTCTaGGCGTGCGGATGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMCGRPF*ACGWLY
Trigger: GTAAAGCCATCCGCACGCTCAGAAAGGCCGTCCACA...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTCATTGGTTTTCTGCATaGCCCTGGCCCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAHWFSA*PWPTPQ
Trigger: CTGTGGAGTGGGCCAGGGTCATGCAGAAAACCAATG...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCATTCAATGTACCCAGTaGAATCTCCCAGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPIQCTQ*NLPAPL
Trigger: GAGGGGAGCTGGGAGATTTCACTGGGTACATTGAAT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGAGTGGCACGTGGGCTaGGTCATTTGTAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLEWHVG*VICKVS
Trigger: TGAGACCTTACAAATGACTCAGCCCACGTGCCACTC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAATACCCGACTGTGCTaGCATGCAGAAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPNTRLC*HAEGRQ
Trigger: CTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGAGCTCAGCCAGCCCGTaGTCTATCCAAGACATCCGC +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKSSASP*SIQDIR
Trigger: GCGGATGTCTTGGATAGATCACGGGCTGGCTGAGCT...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAGTCTCACCTAGGCTaGCCAAAGTCCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPESHLG*PKSSSA
Trigger: GGCTGAGCTGGACTTTGGTCAGCCTAGGTGAGACTC...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCTCCGTCTCTCACATTTaGGACTGGGGAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKASVSHI*DWGRKA
Trigger: TGCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGA...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTTCATCTACATCCTCCTaGGGCCCCGCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVSSTSS*GPAARP
Trigger: GGGCCGTGCCGCGGGGCCGCAGGAGGATGTAGATGA...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCATGTCCTCACACTGCCTaGCTTCCCCTTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPCPHTA*LPLGSQ
Trigger: CTGGCTACCAAGGGGAAGGCAGGCAGTGTGAGGACA...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCACGTTGACACAGGTATaGTGGCAGCCGCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLTLTQV*WQPPLF
Trigger: GAACAATGGCGGCTGCCAGCATACCTGTGTCAACGT...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAACGTTGACACAGGTATaGTGGCAGCCGCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLTLTQV*WQPPLF
Trigger: GAACAATGGCGGCTGCCAGCATACCTGTGTCAACGT...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATCTTCCGAGCGGTGAATaGAGGTGTGCTGATTGTCAC +
Preference number: 4 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHLPSGE*RCADCH
Trigger: GTGACAATCAGCACACCTGCATTCACCGCTCGGAAG...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTACTTCCGAGCGGTGAATaGAGGTGTGCTGATTGTCAC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLLPSGE*RCADCH
Trigger: GTGACAATCAGCACACCTGCATTCACCGCTCGGAAG...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGCCCTTGGGGCCTCCTTaGAGATGTGACTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMPLGPP*RCDYSR
Trigger: ACGGCTGTAGTCACATCTGCAAGGAGGCCCCAAGGG...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCACCCTTGGGGCCTCCTTaGAGATGTGACTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPPLGPP*RCDYSR
Trigger: ACGGCTGTAGTCACATCTGCAAGGAGGCCCCAAGGG...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGGGTTACAGGTCAAGATaGAGTCTCTCTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMGYRSR*SLSGSW
Trigger: CCAAGAACCAGAGAGACTGCATCTTGACCTGTAACC...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGTATCGTCACAGGAGTaGTGGCACCCACCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPVSSQE*WHPPFP
Trigger: TGGGAACGGTGGGTGCCAGCACTCCTGTGACGATAC...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCGATCACAACCTCCATTaGGGGTCTGGCACTCATCAA +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPDHNLH*GSGTHQ
Trigger: TTGATGAGTGCCAGACCCGCAATGGAGGTTGTGATC...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCAAGCCGCAGTCAAAACTaGCCACGATGTTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPSRSQN*PRCFCR
Trigger: TCTGCAAAAACATCGTGGGCAGTTTTGACTGCGGCT...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGGGTGTACCCTCGGTTaGAAGCACAAGCAAATGTGC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLGCTLG*KHKQMC
Trigger: GCACATTTGCTTGTGCTTGCAACCGAGGGTACACCC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCCGGTTCGCTTTACGATaGAGCTCAGGTCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPRFALR*SSGHKK
Trigger: CTTCTTGTGACCTGAGCTGCATCGTAAAGCGAACCG...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATGACACATTGGTTTTCTaGATGACCCTGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHDTLVF*MTLAHS
Trigger: GGAGTGGGCCAGGGTCATGCAGAAAACCAATGTGTC...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAACTTCAGGCTGGAACGTaGCCAGGGCACAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKLQAGT*PGHRAG
Trigger: GCCAGCTCTGTGCCCTGGGCACGTTCCAGCCTGAAG...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACTTCAGGCTGGAACGTaGCCAGGGCACAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVLQAGT*PGHRAG
Trigger: GCCAGCTCTGTGCCCTGGGCACGTTCCAGCCTGAAG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCGCGACCCCCATGGATaGCTCAGCGGTTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVRDPHG*LSGCGQ
Trigger: CTGCCCGCAACCGCTGAGCCATCCATGGGGGTCGCG...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCTTGACACAGGTATGCTaGCAGCCGCCATTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLLTQVC*QPPLFS
Trigger: GGAGAACAATGGCGGCTGCCAGCATACCTGTGTCAA...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCCACCCACCGTTCCCATaGTTACAGGTCAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKAHPPFP*LQVKMQ
Trigger: CTGCATCTTGACCTGTAACCATGGGAACGGTGGGTG...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAATCTTGTACTGTGGATaGCAGCTGCACTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLILYCG*QLHSGP
Trigger: TGGCCCAGAGTGCAGCTGCCATCCACAGTACAAGAT...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCAGTCTTCCCATCCAACTaGAGAGTGAATCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPVFPSN*RVNPTG
Trigger: TCCTGTTGGATTCACTCTCCAGTTGGATGGGAAGAC...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCACCTCCATTGCGGGTCTaGCACTCATCAATATCTTTA +
Preference number: 4 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSPPLRV*HSSISL
Trigger: TAAAGATATTGATGAGTGCCAGACCCGCAATGGAGG...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACAGGACTCTGCCTaGCGTTCAGATGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHPQDSA*RSDVLG
Trigger: TCCCAGAACATCTGAACGCCAGGCAGAGTCCTGTGG...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACACCACAGGACTCTGCCTaGCGTTCAGATGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTPQDSA*RSDVLG
Trigger: TCCCAGAACATCTGAACGCCAGGCAGAGTCCTGTGG...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCGGCCCCAGAATTTCCTaGTCTTGGGCATGGTTCACA +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKAGPRIS*SWAWFT
Trigger: TGTGAACCATGCCCAAGACCAGGAAATTCTGGGGCC...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTACATATTCCAAGCTTCTaGGGTCTTCAGGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLHIPSF*GLQGPR
Trigger: TCTGGGGCCCTGAAGACCCCAGAAGCTTGGAATATG...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATCGACCAGCTTCAGGCTaGAACGTGCCCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYRPASG*NVPRAQ
Trigger: CTGTGCCCTGGGCACGTTCCAGCCTGAAGCTGGTCG...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CTCTGTCTCTCTCAGCAGAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGAGAGGCTGGGTAATTGCCTaGGTAGTTTGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: LCLSQQSHVGGIWVHPKRGWVIA*VVWGFN
Trigger: ATTGAATCCCCAAACTACCCAGGCAATTACCCAGCC...TCTCTTGGGGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAGAGAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGTTGTATCACACAGGCTaGAGAAGGCTGTGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMLYHTG*RRLWRN
Trigger: GTTTCTCCACAGCCTTCTCCAGCCTGTGTGATACAA...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCCAGCAGTTTGCCAGCTaGCTCCGAAGTTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GTCESAMSFPLILPAFLSQQFAS*LRSWLC
Trigger: ACAGAGCCAACTTCGGAGCCAGCTGGCAAACTGCTG...GCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGCATTTGCTGCAGGGTaGAAGCTTGCAACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLAFAAG*KLATRK
Trigger: CTTCCTCGTTGCAAGCTTCCACCCTGCAGCAAATGC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGCATACATGACAGGCTaGGCCTCACCACACCCACCT +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPAYMTG*ASPHPP
Trigger: AGGTGGGTGTGGTGAGGCCCAGCCTGTCATGTATGC...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTATCCCCATCCACCACTaGTGTGGTGTTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAIPIHH*CGVALC
Trigger: ACAGAGAGCAACACCACATCAGTGGTGGATGGGGAT...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATCAGCACACGTTTCCATaGGCAGCCGCCGTTTCACCC +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYQHTFP*AAAVSP
Trigger: GGGTGAAACGGCGGCTGCTCATGGAAACGTGTGCTG...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCCATCCAACTGGAGAGTaGATCCAACAGGACAACTGC +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKAHPTGE*IQQDNC
Trigger: GCAGTTGTCCTGTTGGATTCACTCTCCAGTTGGATG...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGCATTGGTTTTCTGCATaGCCCTGGCCCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKHWFSA*PWPTPQ
Trigger: CTGTGGAGTGGGCCAGGGTCATGCAGAAAACCAATG...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCACATTGGTTTTCTGCATaGCCCTGGCCCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPHWFSA*PWPTPQ
Trigger: CTGTGGAGTGGGCCAGGGTCATGCAGAAAACCAATG...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TGTCCACGGAGCAGAGTCCGTCTCTCACATTTGAGACTGGGGAAGGAAGGCATATCCCAGCCCTGCAACTaGCACATTGGTTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: CPRSRVRLSHLRLGKEGISQPCN*HIGFLH
Trigger: ATGCAGAAAACCAATGTGTCAGTTGCAGGGCTGGGA...TATGCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGACTCTGCTCCGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGAGTGGCACGTGGGCTaGGTCATTTGTAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTEWHVG*VICKVS
Trigger: TGAGACCTTACAAATGACTCAGCCCACGTGCCACTC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGCAGAACATTTGTATTaGGTGGCACGTGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLAEHLY*VARGLS
Trigger: ACTCAGCCCACGTGCCACTCAATACAAATGTTCTGC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGTTACTGTTAGAGAATaGGACCACCCTTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLVTVRE*DHPSRG
Trigger: GCCCCTTGAAGGGTGGTCTCATTCTCTAACAGTAAC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTACGTTGACACAGGTATaGTGGCAGCCGCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWATLTQV*WQPPLF
Trigger: GAACAATGGCGGCTGCCAGCATACCTGTGTCAACGT...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATGGAAAAACCCCTCCTTaGAGCAGCACTCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHGKTPP*SSTHSS
Trigger: GGAGCTATGAGTGCTGCTGCAAGGAGGGGTTTTTCC...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCACTCACAGGCGACGCTaGCCCTTGGGGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FNNTENSSSRNDREALLATHRRR*PLGPPC
Trigger: GCAAGGAGGCCCCAAGGGGCAGCGTCGCCTGTGAGT...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATACTGTGGATGGCAGCTaGACTCTGGGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYTVDGS*TLGHRL
Trigger: CAGCCGATGGCCCAGAGTGCAGCTGCCATCCACAGT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACTGTGGATGGCAGCTaGACTCTGGGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKTVDGS*TLGHRL
Trigger: CAGCCGATGGCCCAGAGTGCAGCTGCCATCCACAGT...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTACTCCTCCCATCTGTGTaGATCTTGTACTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLLLPSV*ILYCGW
Trigger: CCATCCACAGTACAAGATGCACACAGATGGGAGGAG...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCCGGTTCGCTTTACGATaGAGCTCAGGTCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLRFALR*SSGHKK
Trigger: CTTCTTGTGACCTGAGCTGCATCGTAAAGCGAACCG...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTACGGTTCGCTTTACGATaGAGCTCAGGTCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLRFALR*SSGHKK
Trigger: CTTCTTGTGACCTGAGCTGCATCGTAAAGCGAACCG...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCACTCCACAGGACTCTaGCTGGCGTTCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHHSTGL*LAFRCS
Trigger: AGAACATCTGAACGCCAGGCAGAGTCCTGTGGAGTG...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTCACTCCACAGGACTCTaGCTGGCGTTCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAHSTGL*LAFRCS
Trigger: AGAACATCTGAACGCCAGGCAGAGTCCTGTGGAGTG...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAATGCAGCGTTCTCGTaGTCCATCATAATAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPNAAFS*SIIIGP
Trigger: GGGACCTATTATGATGGAGCACGAGAACGCTGCATT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCACAGAGCTGGCAAGGTaGAAAGCCATCTGCAGAATA +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPTELAR*KAICRI
Trigger: TATTCTGCAGATGGCTTTGCACCTTGCCAGCTCTGT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTGTTGGCTGGGTAATTaGCTGGGTAGTTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPCWLGN*LGSLGI
Trigger: AATCCCCAAACTACCCAGGCAATTACCCAGCCAACA...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp GGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCTCCCCTCATCTTGCCTaGCTTTCTGAGCATGTGTGC +
Preference number: 4 (lower is better)
Translates to: GTCESAMSFPLILPAFLSSPHLA*LSEHVC
Trigger: GCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGA...GCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCCAGTCATCTAGCCCTTaGGCACACTCATCTACATCC +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLQSSSP*AHSSTS
Trigger: GGATGTAGATGAGTGTGCCCAAGGGCTAGATGACTG...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACACAGGGCGTCGGCATaGCAGTCATCTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVHRASA*QSSSPW
Trigger: CCAAGGGCTAGATGACTGCCATGCCGACGCCCTGTG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGCACAGGGCGTCGGCATaGCAGTCATCTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRHRASA*QSSSPW
Trigger: CCAAGGGCTAGATGACTGCCATGCCGACGCCCTGTG...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCACCCACCGTTCCCATaGTTACAGGTCAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHHPPFP*LQVKMQ
Trigger: CTGCATCTTGACCTGTAACCATGGGAACGGTGGGTG...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTCGTCACAGGAGTGCTaGCACCCACCGTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYSSQEC*HPPFPW
Trigger: CCATGGGAACGGTGGGTGCCAGCACTCCTGTGACGA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTATCTTGTACTGTGGATaGCAGCTGCACTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAILYCG*QLHSGP
Trigger: TGGCCCAGAGTGCAGCTGCCATCCACAGTACAAGAT...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGTGCATCTTGTACTGTaGATGGCAGCTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTVHLVL*MAAALW
Trigger: CCAGAGTGCAGCTGCCATCCACAGTACAAGATGCAC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAACAGGACAACTGCAGTaGACACCTGTCGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLTGQLQ*TPVEVS
Trigger: GGATACTTCGACAGGTGTCCACTGCAGTTGTCCTGT...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGCCACAGGACTCTGCCTaGCGTTCAGATGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKPQDSA*RSDVLG
Trigger: TCCCAGAACATCTGAACGCCAGGCAGAGTCCTGTGG...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCCAGGCCCCAGAATTTCCTaGTCTTGGGCATGGTTCACA +
Preference number: 4 (lower is better)
Translates to: AHSSEKLMPLKAILSLHPGPRIS*SWAWFT
Trigger: TGTGAACCATGCCCAAGACCAGGAAATTCTGGGGCC...TGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTCATATTCCAAGCTTCTaGGGTCTTCAGGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAHIPSF*GLQGPR
Trigger: TCTGGGGCCCTGAAGACCCCAGAAGCTTGGAATATG...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCATACATCGGTGAGTGGTaGTGTTGTAGAAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPYIGEW*CCRNVQ
Trigger: CTGGACATTTCTACAACACCACCACTCACCGATGTA...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCAGAATACATCGGTGAGTaGTGGTGTTGTAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSEYIGE*WCCRNV
Trigger: GACATTTCTACAACACCACCACTCACCGATGTATTC...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCCTGGTATGTTCCCACTaGGCAACGAATACATCGGTG +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKALVCSH*ATNTSV
Trigger: CACCGATGTATTCGTTGCCCAGTGGGAACATACCAG...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGTCGTAGTATTTCCTaGGCAAGAAACACAATTATT +
Preference number: 4 (lower is better)
Translates to: QSLHTSAEGSLREGRARGSRSIS*ARNTII
Trigger: AATAATTGTGTTTCTTGCCCAGGAAATACTACGACT...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCAACTGGGTTATGTTTGTaGAGCCATCAAAGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPTGLCL*SHQSQS
Trigger: CGACTGACTTTGATGGCTCCACAAACATAACCCAGT...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TGTCTCTCTCAGCAGAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGAGATACATCATATGTCACGTATaGGACCTGGAACCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: CLSQQSHVGGIWVHPKRYIICHV*DLEPSS
Trigger: GCTAGAGGGTTCCAGGTCCCATACGTGACATATGAT...GTATCTCTTGGGGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAGAGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR TCA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCGAGGTGGGTGTGTTCTaGCACAGGGCGTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: FNNTENSSSRNDREALLAEVGVF*HRASAW
Trigger: CCATGCCGACGCCCTGTGTCAGAACACACCCACCTC...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR TCA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCATCCAACTGGAGAGTaGATCCAACAGGACAACTGC +
Preference number: 4 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHHPTGE*IQQDNC
Trigger: GCAGTTGTCCTGTTGGATTCACTCTCCAGTTGGATG...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACACATCCAACTGGAGAGTaGATCCAACAGGACAACTGC +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTHPTGE*IQQDNC
Trigger: GCAGTTGTCCTGTTGGATTCACTCTCCAGTTGGATG...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATGCCAGAGTGACATCTaGGGAAGCACCCGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVCQSDI*GSTRLL
Trigger: GAGGAGACGGGTGCTTCCTCAGATGTCACTCTGGCA...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGCCAGAGTGACATCTaGGGAAGCACCCGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYCQSDI*GSTRLL
Trigger: GAGGAGACGGGTGCTTCCTCAGATGTCACTCTGGCA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAATCTTTGACCTGGAGGTaGAGGCGATGGGGCGTTCGT +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKSLTWR*RRWGVR
Trigger: ACGAACGCCCCATCGCCTTCACCTCCAGGTCAAAGA...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTCTTTGACCTGGAGGTaGAGGCGATGGGGCGTTCGT +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYSLTWR*RRWGVR
Trigger: ACGAACGCCCCATCGCCTTCACCTCCAGGTCAAAGA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGCAGAACATTTGTATTaGGTGGCACGTGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTAEHLY*VARGLS
Trigger: ACTCAGCCCACGTGCCACTCAATACAAATGTTCTGC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAACTCTAATGAGTCACTaGTACGGGAGGCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLTLMSH*YGRQQY
Trigger: GTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGT...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAAGCTCAGCCAGCCCGTaGTCTATCCAAGACATCCGC +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVSSASP*SIQDIR
Trigger: GCGGATGTCTTGGATAGATCACGGGCTGGCTGAGCT...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATAGGAAGAGCCACAGGTaGCAGAGTAGGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYRKSHR*QSRPLA
Trigger: TGCAAGGGGCCTACTCTGTCACCTGTGGCTCTTCCT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATACCTCAGATCCCTTGTaGTGGGAAGCCCACTTGGGG +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYTSDPL*WEAHLG
Trigger: CCCCAAGTGGGCTTCCCATCACAAGGGATCTGAGGT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGGGAAAAACCCCTCCTTaGAGCAGCACTCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKGKTPP*SSTHSS
Trigger: GGAGCTATGAGTGCTGCTGCAAGGAGGGGTTTTTCC...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGCTTCCGAGCGGTGAATaGAGGTGTGCTGATTGTCAC +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKLPSGE*RCADCH
Trigger: GTGACAATCAGCACACCTGCATTCACCGCTCGGAAG...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACCCTTGGGGCCTCCTTaGAGATGTGACTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVPLGPP*RCDYSR
Trigger: ACGGCTGTAGTCACATCTGCAAGGAGGCCCCAAGGG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGGTTACAGGTCAAGATaGAGTCTCTCTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLGYRSR*SLSGSW
Trigger: CCAAGAACCAGAGAGACTGCATCTTGACCTGTAACC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCAAGTATCCTTACAGGTaGGGTCACAGCCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKAKYPYR*GHSLHC
Trigger: ACAATGGAGGCTGTGACCGCACCTGTAAGGATACTT...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCAGCCGCAGTCAAAACTaGCCACGATGTTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKASRSQN*PRCFCR
Trigger: TCTGCAAAAACATCGTGGGCAGTTTTGACTGCGGCT...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGGGTGTACCCTCGGTTaGAAGCACAAGCAAATGTGC +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPGCTLG*KHKQMC
Trigger: GCACATTTGCTTGTGCTTGCAACCGAGGGTACACCC...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTCTTTTACTGAGCTGTaGTTCTCTGGTAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPSFTEL*FSGSAG
Trigger: ACCAGCACTACCAGAGAAGCACAGCTCAGTAAAAGA...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGCACTCCACAGGACTCTaGCTGGCGTTCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKHSTGL*LAFRCS
Trigger: AGAACATCTGAACGCCAGGCAGAGTCCTGTGGAGTG...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGGACACATTGGTTTTCTaGATGACCCTGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMDTLVF*MTLAHS
Trigger: GGAGTGGGCCAGGGTCATGCAGAAAACCAATGTGTC...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATACAGAGCTGGCAAGGTaGAAAGCCATCTGCAGAATA +
Preference number: 4 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHTELAR*KAICRI
Trigger: TATTCTGCAGATGGCTTTGCACCTTGCCAGCTCTGT...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAACAGAGCTGGCAAGGTaGAAAGCCATCTGCAGAATA +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLTELAR*KAICRI
Trigger: TATTCTGCAGATGGCTTTGCACCTTGCCAGCTCTGT...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCCTTCAGGCTGGAACGTaGCCAGGGCACAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: FNNTENSSSRNDREALLALQAGT*PGHRAG
Trigger: GCCAGCTCTGTGCCCTGGGCACGTTCCAGCCTGAAG...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTCTGATGGTTCTCAGATaGATAGAGCCTGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWALMVLR*IEPAIS
Trigger: CGAGATGGCAGGCTCTATGCATCTGAGAACCATCAG...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAACCCTCTTGCCTGTTCTaGCTGGTCAGAGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKPSCLF*LVRACT
Trigger: TGTGCAGGCTCTGACCAGGCAGAACAGGCAAGAGGG...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACCCTCTTGCCTGTTCTaGCTGGTCAGAGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVPSCLF*LVRACT
Trigger: TGTGCAGGCTCTGACCAGGCAGAACAGGCAAGAGGG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTTGGACGCTCTTTCCATGTaGTGCAGGCTGTGCTTACCA +
Preference number: 4 (lower is better)
Translates to: VSNVFSPHLACLSEHVCLDALSM*CRLCLP
Trigger: TGGTAAGCACAGCCTGCAGCACATGGAAAGAGCGTC...CAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR GCA 90 bp GAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTTGCTTGTCAGCAGTTTaGCAGCTGGCTCCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ESAMSFPLILPAFLSMCACLSAV*QLAPKL
Trigger: CAACTTCGGAGCCAGCTGGCAAACTGCTGACAAGCA...AGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACACAGTCATCTAGCCCTTaGGCACACTCATCTACATCC +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTQSSSP*AHSSTS
Trigger: GGATGTAGATGAGTGTGCCCAAGGGCTAGATGACTG...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCATTGACACAGGTATGCTaGCAGCCGCCATTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPLTQVC*QPPLFS
Trigger: GGAGAACAATGGCGGCTGCCAGCATACCTGTGTCAA...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCACACCCACCGTTCCCATaGTTACAGGTCAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPHPPFP*LQVKMQ
Trigger: CTGCATCTTGACCTGTAACCATGGGAACGGTGGGTG...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGCACCCACCGTTCCCATaGTTACAGGTCAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMHPPFP*LQVKMQ
Trigger: CTGCATCTTGACCTGTAACCATGGGAACGGTGGGTG...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATATGGCAGCTGCACTCTaGGCCATCGGCTGTATCGTC +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYMAAAL*AIGCIV
Trigger: GACGATACAGCCGATGGCCCAGAGTGCAGCTGCCAT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGTGCATCTTGTACTGTaGATGGCAGCTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPVHLVL*MAAALW
Trigger: CCAGAGTGCAGCTGCCATCCACAGTACAAGATGCAC...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTACAGGACAACTGCAGTaGACACCTGTCGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWATGQLQ*TPVEVS
Trigger: GGATACTTCGACAGGTGTCCACTGCAGTTGTCCTGT...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTTCGGCCAGGGGCTCCTaGGACTTGCTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVSARGS*DLLARA
Trigger: AGCTCTGGCAAGCAAGTCCCAGGAGCCCCTGGCCGA...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATCCTGGTCTTGGGCATaGTTCACAAGTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLSWSWA*FTSHLS
Trigger: GGACAAATGACTTGTGAACCATGCCCAAGACCAGGA...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGCATATTCCAAGCTTCTaGGGTCTTCAGGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMHIPSF*GLQGPR
Trigger: TCTGGGGCCCTGAAGACCCCAGAAGCTTGGAATATG...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATCTCCCTGATGTTTGGTaGCAAGGCCTCCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYLPDVW*QGLLHR
Trigger: CCTGTGGAGGAGGCCTTGCCACCAAACATCAGGGAG...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCTGGTATGTTCCCACTaGGCAACGAATACATCGGTG +
Preference number: 4 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHLVCSH*ATNTSV
Trigger: CACCGATGTATTCGTTGCCCAGTGGGAACATACCAG...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCATTGCCTGGGTAGTTTaGGGATTCAATGTACCCAGT +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPIAWVV*GFNVPS
Trigger: ACTGGGTACATTGAATCCCCAAACTACCCAGGCAAT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTACACTCGGTGTTGGCTaGGTAATTGCCTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWATLGVG*VIAWVV
Trigger: AACTACCCAGGCAATTACCCAGCCAACACCGAGTGT...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GGGAGGCATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTGTTACGTACACTCGGTGTTaGCTGGGTAATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRHLGPPQEILKLLVLGVTYTRC*LGNCLG
Trigger: ACCCAGGCAATTACCCAGCCAACACCGAGTGTACGT...AACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAATCATATGTCACGTATaGGACCTGGAACCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLIICHV*DLEPSS
Trigger: GCTAGAGGGTTCCAGGTCCCATACGTGACATATGAT...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACAGTCCCTCAGGCAATaGCCAGCAGAGTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVQSLRQ*PAECQR
Trigger: CCTCTGACACTCTGCTGGCCATTGCCTGAGGGACTG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CCA 90 bp TGTCCACGGAGCAGAGTCCGTCTCTCACATTTGAGACTGGGGAAGGAAGGCATAAGTGAGATGATCGTGTaGCATTCAGGGGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: CPRSRVRLSHLRLGKEGISEMIV*HSGGVS
Trigger: AGAAACACCCCCTGAATGCCACACGATCATCTCACT...TATGCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGACTCTGCTCCGTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649792.2
3UTR CAA 72 bp GGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTaGCCTGCCTTTCTGAGCATGTGTGCTTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GTCESAMSFPLI*PAFLSMCACQQ
Trigger: CTGCTGACAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
3UTR CAA 72 bp TCTCTGTCTCTCTCAGCAGAGCCATGTGGGAGGCATTaGGGTCCACCCCAAGAGATACTAAAACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLSLSAEPCGRH*GPPQEILKLLV
Trigger: GACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAGAGAGACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTCGTCATGAGCCAACATaGAGCCATCAAAACAAGTGC +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWARHEPT*SHQNKC
Trigger: GCACTTGTTTTGATGGCTTCATGTTGGCTCATGACG...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCATGTTTTTGCAGAAATaGTCACAACCTCCATTGCGG +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPMFLQK*SQPPLR
Trigger: CCGCAATGGAGGTTGTGATCATTTCTGCAAAAACAT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCTGTGGACGGCCTTTCTaGGCGTGCGGATGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFCGRPF*ACGWLY
Trigger: GTAAAGCCATCCGCACGCTCAGAAAGGCCGTCCACA...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGAATATTCACCAGGTTaGCACAGACCTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLEYSPG*HRPPHS
Trigger: TGAATGTGGAGGTCTGTGTCAACCTGGTGAATATTC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCCATGTCCAGGTGAACATTaGACTCTGGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: AHSSEKLMPLKAILSLHPCPGEH*TLVSQS
Trigger: GGACTGTGAAACCAGAGTTCAATGTTCACCTGGACA...TGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTTGTCCAGGTGAACATTaGACTCTGGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWACPGEH*TLVSQS
Trigger: GGACTGTGAAACCAGAGTTCAATGTTCACCTGGACA...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATTGTCCAGGTGAACATTaGACTCTGGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHCPGEH*TLVSQS
Trigger: GGACTGTGAAACCAGAGTTCAATGTTCACCTGGACA...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCGTAGAAATGTCCAGGTaGACATTGAACTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPVEMSR*TLNSGF
Trigger: GAAACCAGAGTTCAATGTTCACCTGGACATTTCTAC...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGAATCCACAGCTTCTTTaGCCTGGAGGTGAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMNPQLL*PGGEGD
Trigger: ATCGCCTTCACCTCCAGGTCAAAGAAGCTGTGGATT...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAAATCCACAGCTTCTTTaGCCTGGAGGTGAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPNPQLL*PGGEGD
Trigger: ATCGCCTTCACCTCCAGGTCAAAGAAGCTGTGGATT...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCCAACTCTAATGAGTCACTaGTACGGGAGGCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: AHSSEKLMPLKAILSLHPTLMSH*YGRQQY
Trigger: GTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGT...TGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGCCACTACAGACTCCTTaGGGAGGAGTAAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRPLQTP*GGVRPQ
Trigger: CTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGG...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATCCACTACAGACTCCTTaGGGAGGAGTAAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYPLQTP*GGVRPQ
Trigger: CTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGG...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp AGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTTGTCATCTTGCCTGCCTTTCTaGGCATGTGTGCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SNVFSPHLACLSEHVCLSSCLPF*ACVLVS
Trigger: GCTGACAAGCACACATGCTCAGAAAGGCAGGCAAGA...TGACAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR TCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAGGAAGAGCCACAGGTaGCAGAGTAGGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFRKSHR*QSRPLA
Trigger: TGCAAGGGGCCTACTCTGTCACCTGTGGCTCTTCCT...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCGCTCAAAACCAGGCCTaGACTCACAGGCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: FNNTENSSSRNDREALLAAQNQA*THRRRC
Trigger: GCAGCGTCGCCTGTGAGTGCAGGCCTGGTTTTGAGC...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCGTATCGTCACAGGAGTaGTGGCACCCACCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFVSSQE*WHPPFP
Trigger: TGGGAACGGTGGGTGCCAGCACTCCTGTGACGATAC...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGATCCAACAGGACAACTaGAGTGGACACCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMIQQDN*SGHLSK
Trigger: CTTCGACAGGTGTCCACTGCAGTTGTCCTGTTGGAT...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGGATCACAACCTCCATTaGGGGTCTGGCACTCATCAA +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKDHNLH*GSGTHQ
Trigger: TTGATGAGTGCCAGACCCGCAATGGAGGTTGTGATC...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAAGCCGCAGTCAAAACTaGCCACGATGTTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTSRSQN*PRCFCR
Trigger: TCTGCAAAAACATCGTGGGCAGTTTTGACTGCGGCT...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCCACTCTTACCGCAGTaGAGGGACACACGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVPLLPQ*RDTRGD
Trigger: GTCACCCCGTGTGTCCCTGCACTGCGGTAAGAGTGG...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCCCCTCTTGCCTGTTCTaGCTGGTCAGAGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFPSCLF*LVRACT
Trigger: TGTGCAGGCTCTGACCAGGCAGAACAGGCAAGAGGG...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTTCGTCACAGGAGTGCTaGCACCCACCGTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVSSQEC*HPPFPW
Trigger: CCATGGGAACGGTGGGTGCCAGCACTCCTGTGACGA...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TGTCCACGGAGCAGAGTCCGTCTCTCACATTTGAGACTGGGGAAGGAAGGCATACCTCCATTGCGGGTCTaGCACTCATCAATATCTTTA +
Preference number: 4 (lower is better)
Translates to: CPRSRVRLSHLRLGKEGIPPLRV*HSSISL
Trigger: TAAAGATATTGATGAGTGCCAGACCCGCAATGGAGG...TATGCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGACTCTGCTCCGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCGCTGTCACCTCCTTTTaGTTAGTTTCAAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPAVTSF*LVSSSN
Trigger: GTTTGAGCTTGAAACTAACCAAAAGGAGGTGACAGC...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATCCACAGGACTCTGCCTaGCGTTCAGATGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYPQDSA*RSDVLG
Trigger: TCCCAGAACATCTGAACGCCAGGCAGAGTCCTGTGG...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCATGTCCTTCCTCATTTTaGAAGGTTCCATTTGGACAT +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPCPSSF*KVPFGH
Trigger: ATGTCCAAATGGAACCTTCCAAAATGAGGAAGGACA...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATCCTGGTCTTGGGCATaGTTCACAAGTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTSWSWA*FTSHLS
Trigger: GGACAAATGACTTGTGAACCATGCCCAAGACCAGGA...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAGAATTTCCTGGTCTTaGGCATGGTTCACAAGTCAT +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPRISWS*AWFTSH
Trigger: ATGACTTGTGAACCATGCCCAAGACCAGGAAATTCT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp AAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAATTCGACCAGCTTCAGGCTaGAACGTGCCCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: KPFSVYIHDAGKEKPSSIRPASG*NVPRAQ
Trigger: CTGTGCCCTGGGCACGTTCCAGCCTGAAGCTGGTCG...AATTGAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCTTTCCAAATTCAGGCTaGTATGTTCCCACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKAFPNSG*YVPTGQ
Trigger: TTGCCCAGTGGGAACATACCAGCCTGAATTTGGAAA...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp AGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTTGTCAACGTACACTCGGTGTTaGCTGGGTAATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SNVFSPHLACLSEHVCLSTYTRC*LGNCLG
Trigger: ACCCAGGCAATTACCCAGCCAACACCGAGTGTACGT...TGACAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAGTCACGTATGGGACCTaGAACCCTCTAGCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVVTYGT*NPLALF
Trigger: GAACAGCGCTAGAGGGTTCCAGGTCCCATACGTGAC...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTGTATTGAGTGGCACGTaGGCTGAGTCATTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAVLSGT*AESFVR
Trigger: CCTTACAAATGACTCAGCCCACGTGCCACTCAATAC...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGTATTGAGTGGCACGTaGGCTGAGTCATTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTVLSGT*AESFVR
Trigger: CCTTACAAATGACTCAGCCCACGTGCCACTCAATAC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGGATGAAGTTTTACACTaGGTTATGTTTGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMDEVLH*VMFVEP
Trigger: TGGCTCCACAAACATAACCCAGTGTAAAACTTCATC...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450649.6
CDS-3UTR TCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCACGTCATGAGCCAACATaGAGCCATCAAAACAAGTGC +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPRHEPT*SHQNKC
Trigger: GCACTTGTTTTGATGGCTTCATGTTGGCTCATGACG...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGAATATTCACCAGGTTaGCACAGACCTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTEYSPG*HRPPHS
Trigger: TGAATGTGGAGGTCTGTGTCAACCTGGTGAATATTC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATGTAGAAATGTCCAGGTaGACATTGAACTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHVEMSR*TLNSGF
Trigger: GAAACCAGAGTTCAATGTTCACCTGGACATTTCTAC...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp ATTGTCAGTGTCCCCAAATGCCTGTTAAAATTTGGCACTTGTGAGTCAGCAATGTCTTTGACCTGGAGGTaGAGGCGATGGGGCGTTCGT +
Preference number: 4 (lower is better)
Translates to: IVSVPKCLLKFGTCESAMSLTWR*RRWGVR
Trigger: ACGAACGCCCCATCGCCTTCACCTCCAGGTCAAAGA...CATTGCTGACTCACAAGTGCCAAATTTTAACAGGCATTTGGGGACACTGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR TCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATCATTGGACTTGAACTaGATCCACAGCTTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLSLDLN*IHSFFD
Trigger: GTCAAAGAAGCTGTGGATTCAGTTCAAGTCCAATGA...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGAACTATGTCTTCAATaGGTTCCTGGTAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLELCLQ*VPGSPH
Trigger: ATGAGGACTACCAGGAACTCATTGAAGACATAGTTC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATGAGTGGCACGTGGGCTaGGTCATTTGTAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYEWHVG*VICKVS
Trigger: TGAGACCTTACAAATGACTCAGCCCACGTGCCACTC...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGACTCTAATGAGTCACTaGTACGGGAGGCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMTLMSH*YGRQQY
Trigger: GTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGT...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAGGCTGTGGAGAAACTaGGTCCTCCCAGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFRLWRN*VLPGLK
Trigger: CTTGAGACCTGGGAGGACTCAGTTTCTCCACAGCCT...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp CCATGTGGGAGGCATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGTTGCTTTTGGGTAGATaGGGCTCTCTGTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PCGRHLGPPQEILKLLVLLLLGR*GSLSLS
Trigger: TGAGAGAGACAGAGAGCCTCATCTACCCAAAAGCAA...CAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCCACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR TCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCAATGATTCTCATCCACTaGGGAAATTACATTTCACCT +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPMILIH*GNYISP
Trigger: AGGTGAAATGTAATTTCCTCAGTGGATGAGAATCAT...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR TCA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCGAAGGAAGGCATACATaGCAGGCTGGGCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: FNNTENSSSRNDREALLAEGRHT*QAGPHH
Trigger: GTGGTGAGGCCCAGCCTGTCATGTATGCCTTCCTTC...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATGGAAAAACCCCTCCTTaGAGCAGCACTCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYGKTPP*SSTHSS
Trigger: GGAGCTATGAGTGCTGCTGCAAGGAGGGGTTTTTCC...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp GGAAGCTTGCAACGAGGAAGGCTGGCAATAAATGTACATTATTATGTCTCCAGACCCTTGGGGCCTCCTTaGAGATGTGACTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: GSLQRGRLAINVHYYVSRPLGPP*RCDYSR
Trigger: ACGGCTGTAGTCACATCTGCAAGGAGGCCCCAAGGG...TCTGGAGACATAATAATGTACATTTATTGCCAGCCTTCCTCGTTGCAAGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCTGCCCACGATGTTTTTaGAGAAATGATCACAACCTC +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKACPRCF*RNDHNL
Trigger: GAGGTTGTGATCATTTCTGCAAAAACATCGTGGGCA...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTTCTTTTACTGAGCTGTaGTTCTCTGGTAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWASFTEL*FSGSAG
Trigger: ACCAGCACTACCAGAGAAGCACAGCTCAGTAAAAGA...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTGGGGCTCCTGGGACTTaGTTGCCAGAGCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVGAPGT*LPELHV
Trigger: TACATGCAGCTCTGGCAAGCAAGTCCCAGGAGCCCC...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR GCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAACACTCCACAGGACTCTaGCTGGCGTTCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKHSTGL*LAFRCS
Trigger: AGAACATCTGAACGCCAGGCAGAGTCCTGTGGAGTG...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCCATTTGGACATAAAATaGAGCGTTCTCGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLHLDIK*SVLVLH
Trigger: ATGGAGCACGAGAACGCTGCATTTTATGTCCAAATG...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGTGTTGGCTGGGTAATTaGCTGGGTAGTTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMCWLGN*LGSLGI
Trigger: AATCCCCAAACTACCCAGGCAATTACCCAGCCAACA...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TGTGGGAGGCATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTTGTTGGCTGGGTAATTaGCTGGGTAGTTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: CGRHLGPPQEILKLLVLGCWLGN*LGSLGI
Trigger: AATCCCCAAACTACCCAGGCAATTACCCAGCCAACA...ACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR GCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTCAGATGCATAGAGCCTaGCATCTCGAACTATGTCTT +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAQMHRA*HLELCL
Trigger: AAGACATAGTTCGAGATGGCAGGCTCTATGCATCTG...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATAGTCTACATCCACGATaGTGGGAAAGAAAAACCAAG +
Preference number: 4 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHSLHPR*WERKTK
Trigger: CTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACT...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp AGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTTGTCAGCTCTTTCCATGTGCTaGAGGCTGTGCTTACCATCA +
Preference number: 4 (lower is better)
Translates to: SNVFSPHLACLSEHVCLSALSMC*RLCLPS
Trigger: TGATGGTAAGCACAGCCTGCAGCACATGGAAAGAGC...TGACAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR GCA 90 bp TGTGGGAGGCATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTAGGTTGCCAGTTGGTTaGTTTTGGGTAGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: CGRHLGPPQEILKLLVLGRLPVG*FWVDEA
Trigger: AGCCTCATCTACCCAAAAGCAACCAACTGGCAACCT...ACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTTGACACAGGTATGCTaGCAGCCGCCATTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYLTQVC*QPPLFS
Trigger: GGAGAACAATGGCGGCTGCCAGCATACCTGTGTCAA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATATCTTGTACTGTGGATaGCAGCTGCACTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYILYCG*QLHSGP
Trigger: TGGCCCAGAGTGCAGCTGCCATCCACAGTACAAGAT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGGTGCATCTTGTACTGTaGATGGCAGCTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRVHLVL*MAAALW
Trigger: CCAGAGTGCAGCTGCCATCCACAGTACAAGATGCAC...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGGTGTCTCCACAGTaGGTGAAGCCATACAGGGTG +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVLVSPQ*VKPYRV
Trigger: CACCCTGTATGGCTTCACCCACTGTGGAGACACCAA...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTTGGTGTCTCCACAGTaGGTGAAGCCATACAGGGTG +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYLVSPQ*VKPYRV
Trigger: CACCCTGTATGGCTTCACCCACTGTGGAGACACCAA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGTGAACATTGAACTCTaGTTTCACAGTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLVNIEL*FHSPER
Trigger: CCTTTCAGGACTGTGAAACCAGAGTTCAATGTTCAC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGAATACATCGGTGAGTaGTGGTGTTGTAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLEYIGE*WCCRNV
Trigger: GACATTTCTACAACACCACCACTCACCGATGTATTC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTTTTCCAAATTCAGGCTaGTATGTTCCCACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAFPNSG*YVPTGQ
Trigger: TTGCCCAGTGGGAACATACCAGCCTGAATTTGGAAA...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTCCAAATTCAGGCTaGTATGTTCCCACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTFPNSG*YVPTGQ
Trigger: TTGCCCAGTGGGAACATACCAGCCTGAATTTGGAAA...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAACTGGGTTATGTTTGTaGAGCCATCAAAGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTTGLCL*SHQSQS
Trigger: CGACTGACTTTGATGGCTCCACAAACATAACCCAGT...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATATTGCCTGGGTAGTTTaGGGATTCAATGTACCCAGT +
Preference number: 4 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHIAWVV*GFNVPS
Trigger: ACTGGGTACATTGAATCCCCAAACTACCCAGGCAAT...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp GAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCATTGCCTGGGTAGTTTaGGGATTCAATGTACCCAGT +
Preference number: 4 (lower is better)
Translates to: EPCGRHLGPPQEILKLLVIAWVV*GFNVPS
Trigger: ACTGGGTACATTGAATCCCCAAACTACCCAGGCAAT...GACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCCACATGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATACGTACACTCGGTGTTaGCTGGGTAATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYTYTRC*LGNCLG
Trigger: ACCCAGGCAATTACCCAGCCAACACCGAGTGTACGT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CCTCCTATTGTCAGTGTCCCCAAATGCCTGTTAAAATTTGGCACTTGTGAGTCAGTCACGTATGGGACCTaGAACCCTCTAGCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PPIVSVPKCLLKFGTCESVTYGT*NPLALF
Trigger: GAACAGCGCTAGAGGGTTCCAGGTCCCATACGTGAC...TGACTCACAAGTGCCAAATTTTAACAGGCATTTGGGGACACTGACAATAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp CCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCAGGTGGCTTGTTTGATTaGATTCCTTTTTATTCACTG +
Preference number: 4 (lower is better)
Translates to: PARDLSKTSAHSSEKLMPGGLFD*IPFYSL
Trigger: CAGTGAATAAAAAGGAATCCAATCAAACAAGCCACC...TGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATCATCCAACTGGAGAGTaGATCCAACAGGACAACTGC +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYHPTGE*IQQDNC
Trigger: GCAGTTGTCCTGTTGGATTCACTCTCCAGTTGGATG...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATGATGGTGGTGACATCTaGAGAGAGGTGAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYDGGDI*REVNAR
Trigger: TCTGGCATTCACCTCTCTTCAGATGTCACCACCATC...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309263.7
CDS-3UTR TCA 90 bp AAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAATTTGTGGACGGCCTTTCTaGGCGTGCGGATGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: KPFSVYIHDAGKEKPSSICGRPF*ACGWLY
Trigger: GTAAAGCCATCCGCACGCTCAGAAAGGCCGTCCACA...AATTGAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp AATTTGGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCAATCCACAGCTTCTTTaGCCTGGAGGTGAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: NLALVSQQCLFPSSCLPFNPQLL*PGGEGD
Trigger: ATCGCCTTCACCTCCAGGTCAAAGAAGCTGTGGATT...GAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR TCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGAACTATGTCTTCAATaGGTTCCTGGTAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTELCLQ*VPGSPH
Trigger: ATGAGGACTACCAGGAACTCATTGAAGACATAGTTC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAAATACCCGACTGTGCTaGCATGCAGAAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVNTRLC*HAEGRQ
Trigger: CTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATT...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACAGCAGTGAGAAGCTaGTGCCACTCAAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKTAVRS*CHSKPF
Trigger: GAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGT...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTGAATATTCACCAGGTTaGCACAGACCACATTGGTTT +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAEYSPG*HRPHWF
Trigger: AAACCAATGTGGTCTGTGTCAACCTGGTGAATATTC...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520467.5
CDS-3UTR TCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACCGACTCAGGGTTGGTaGAATCGCCTTTTCATGACA +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVPTQGW*NRLFMT
Trigger: TGTCATGAAAAGGCGATTTCACCAACCCTGAGTCGG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCAGCCATCAAAACAAGTaGAACGATAATTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKASHQNK*NDNCLE
Trigger: TTCCAGGCAATTATCGTTGCACTTGTTTTGATGGCT...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATCTCCTCCCATCTGTGTaGATCTTGTACTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYLLPSV*ILYCGW
Trigger: CCATCCACAGTACAAGATGCACACAGATGGGAGGAG...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACTCCTCCCATCTGTGTaGATCTTGTACTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVLLPSV*ILYCGW
Trigger: CCATCCACAGTACAAGATGCACACAGATGGGAGGAG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAATCCAACAGGACAACTaGAGTGGACACCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVIQQDN*SGHLSK
Trigger: CTTCGACAGGTGTCCACTGCAGTTGTCCTGTTGGAT...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp ATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCGATCACAACCTCCATTaGGGGTCTGGCACTCATCAA +
Preference number: 4 (lower is better)
Translates to: MPLKAILSLHPRCWERKTDHNLH*GSGTHQ
Trigger: TTGATGAGTGCCAGACCCGCAATGGAGGTTGTGATC...GGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAGATCACAACCTCCATTaGGGGTCTGGCACTCATCAA +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKDHNLH*GSGTHQ
Trigger: TTGATGAGTGCCAGACCCGCAATGGAGGTTGTGATC...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATGCCCACGATGTTTTTaGAGAAATGATCACAACCTC +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTCPRCF*RNDHNL
Trigger: GAGGTTGTGATCATTTCTGCAAAAACATCGTGGGCA...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATACAGGACAACTGCAGTaGACACCTGTCGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYTGQLQ*TPVEVS
Trigger: GGATACTTCGACAGGTGTCCACTGCAGTTGTCCTGT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCTTGGTGTCTCCACAGTaGGTGAAGCCATACAGGGTG +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFLVSPQ*VKPYRV
Trigger: CACCCTGTATGGCTTCACCCACTGTGGAGACACCAA...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTGTGAACATTGAACTCTaGTTTCACAGTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAVNIEL*FHSPER
Trigger: CCTTTCAGGACTGTGAAACCAGAGTTCAATGTTCAC...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGTGAACATTGAACTCTaGTTTCACAGTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTVNIEL*FHSPER
Trigger: CCTTTCAGGACTGTGAAACCAGAGTTCAATGTTCAC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATCTGGTATGTTCCCACTaGGCAACGAATACATCGGTG +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYLVCSH*ATNTSV
Trigger: CACCGATGTATTCGTTGCCCAGTGGGAACATACCAG...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGACTGGGTTATGTTTGTaGAGCCATCAAAGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMTGLCL*SHQSQS
Trigger: CGACTGACTTTGATGGCTCCACAAACATAACCCAGT...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp AGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTTGTCAGGCTGGGTAATTGCCTaGGTAGTTTGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: SNVFSPHLACLSEHVCLSGWVIA*VVWGFN
Trigger: ATTGAATCCCCAAACTACCCAGGCAATTACCCAGCC...TGACAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp GCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACTACATCCACGATGCTaGGAAAGAAAAACCAAGTTC +
Preference number: 4 (lower is better)
Translates to: AHSSEKLMPLKAILSLHPLHPRC*ERKTKF
Trigger: GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAG...TGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTGTTTGTTTGACATTCATGTGGGAGGCATTTaGGTCCACCCCAAGAGATAC +
Preference number: 4 (lower is better)
Translates to: GSTPRDTKTPCLGCLFDIHVGGI*VHPKRY
Trigger: GTATCTCTTGGGGTGGACCCAAATGCCTCCCACATG...AATGTCAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR TCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACGTCATGAGCCAACATaGAGCCATCAAAACAAGTGC +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVRHEPT*SHQNKC
Trigger: GCACTTGTTTTGATGGCTTCATGTTGGCTCATGACG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTGACAGCCTCCGTTGTTaGTGCTGCACTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVDSLRC*CCTHWC
Trigger: ACACCAATGAGTGCAGCATCAACAACGGAGGCTGTC...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGTCCAGGTGAACATTaGACTCTGGTTTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYCPGEH*TLVSQS
Trigger: GGACTGTGAAACCAGAGTTCAATGTTCACCTGGACA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCATTCAATGTACCCAGTaGAATCTCCCAGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFIQCTQ*NLPAPL
Trigger: GAGGGGAGCTGGGAGATTTCACTGGGTACATTGAAT...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR TCA 90 bp GGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTGTTTGTTTGACATTAATCCACAGCTTCTTTaGCCTGGAGGTGAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: GSTPRDTKTPCLGCLFDINPQLL*PGGEGD
Trigger: ATCGCCTTCACCTCCAGGTCAAAGAAGCTGTGGATT...AATGTCAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR TCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGTCATTGGACTTGAACTaGATCCACAGCTTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMSLDLN*IHSFFD
Trigger: GTCAAAGAAGCTGTGGATTCAGTTCAAGTCCAATGA...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp GGGAGGCATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTGTTTCATTGGACTTGAACTaGATCCACAGCTTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: GRHLGPPQEILKLLVLGVSLDLN*IHSFFD
Trigger: GTCAAAGAAGCTGTGGATTCAGTTCAAGTCCAATGA...AACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR TCA 90 bp ATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCACTCTAATGAGTCACTaGTACGGGAGGCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: MPLKAILSLHPRCWERKTTLMSH*YGRQQY
Trigger: GTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGT...GGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GGAAGCTTGCAACGAGGAAGGCTGGCAATAAATGTACATTATTATGTCTCCAGATGGCCTGACCCAAAGTaGGATGATCGTGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: GSLQRGRLAINVHYYVSRWPDPK*DDRVAF
Trigger: GAATGCCACACGATCATCTCACTTTGGGTCAGGCCA...TCTGGAGACATAATAATGTACATTTATTGCCAGCCTTCCTCGTTGCAAGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTGGAAAAACCCCTCCTTaGAGCAGCACTCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVGKTPP*SSTHSS
Trigger: GGAGCTATGAGTGCTGCTGCAAGGAGGGGTTTTTCC...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCCTTCCGAGCGGTGAATaGAGGTGTGCTGATTGTCAC +
Preference number: 4 (lower is better)
Translates to: FNNTENSSSRNDREALLALPSGE*RCADCH
Trigger: GTGACAATCAGCACACCTGCATTCACCGCTCGGAAG...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAGGTTACAGGTCAAGATaGAGTCTCTCTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVGYRSR*SLSGSW
Trigger: CCAAGAACCAGAGAGACTGCATCTTGACCTGTAACC...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAAGTATCCTTACAGGTaGGGTCACAGCCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRKYPYR*GHSLHC
Trigger: ACAATGGAGGCTGTGACCGCACCTGTAAGGATACTT...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAAAGTATCCTTACAGGTaGGGTCACAGCCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVKYPYR*GHSLHC
Trigger: ACAATGGAGGCTGTGACCGCACCTGTAAGGATACTT...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAAATGCAGCGTTCTCGTaGTCCATCATAATAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKNAAFS*SIIIGP
Trigger: GGGACCTATTATGATGGAGCACGAGAACGCTGCATT...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGCATTTGGACATAAAATaGAGCGTTCTCGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKHLDIK*SVLVLH
Trigger: ATGGAGCACGAGAACGCTGCATTTTATGTCCAAATG...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAACAGAGCTGGCAAGGTaGAAAGCCATCTGCAGAATA +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVTELAR*KAICRI
Trigger: TATTCTGCAGATGGCTTTGCACCTTGCCAGCTCTGT...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp AATTTGGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGTTGGCTGGGTAATTaGCTGGGTAGTTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: NLALVSQQCLFPSSCLPFCWLGN*LGSLGI
Trigger: AATCCCCAAACTACCCAGGCAATTACCCAGCCAACA...GAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR GCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCCTGATGGTTCTCAGATaGATAGAGCCTGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFLMVLR*IEPAIS
Trigger: CGAGATGGCAGGCTCTATGCATCTGAGAACCATCAG...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp AATTTGGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCATGTGCTGCAGGCTGTaGTTACCATCATATGTCACG +
Preference number: 4 (lower is better)
Translates to: NLALVSQQCLFPSSCLPFMCCRL*LPSYVT
Trigger: CGTGACATATGATGGTAAGCACAGCCTGCAGCACAT...GAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGCAACGATAATTGCCTaGAATATTCAAACAGTCATG +
Preference number: 4 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLATIIA*NIQTVM
Trigger: CATGACTGTTTGAATATTCCAGGCAATTATCGTTGC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAGTCTTCCCATCCAACTaGAGAGTGAATCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKVFPSN*RVNPTG
Trigger: TCCTGTTGGATTCACTCTCCAGTTGGATGGGAAGAC...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATGTCTTCCCATCCAACTaGAGAGTGAATCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYVFPSN*RVNPTG
Trigger: TCCTGTTGGATTCACTCTCCAGTTGGATGGGAAGAC...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCTGGTTGATGCAGCTGTaGTCACAGGTCCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: MPLKAILSLHPRCWERKTWLMQL*SQVLSK
Trigger: TTTGGATAGGACCTGTGACCACAGCTGCATCAACCA...GGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATGGTTGATGCAGCTGTaGTCACAGGTCCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVWLMQL*SQVLSK
Trigger: TTTGGATAGGACCTGTGACCACAGCTGCATCAACCA...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGCTGTCACCTCCTTTTaGTTAGTTTCAAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPAVTSF*LVSSSN
Trigger: GTTTGAGCTTGAAACTAACCAAAAGGAGGTGACAGC...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGGAATACATCGGTGAGTaGTGGTGTTGTAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKEYIGE*WCCRNV
Trigger: GACATTTCTACAACACCACCACTCACCGATGTATTC...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAGTCGTAGTATTTCCTaGGCAAGAAACACAATTATT +
Preference number: 4 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPSRSIS*ARNTII
Trigger: AATAATTGTGTTTCTTGCCCAGGAAATACTACGACT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAGGCTGGGTAATTGCCTaGGTAGTTTGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVGWVIA*VVWGFN
Trigger: ATTGAATCCCCAAACTACCCAGGCAATTACCCAGCC...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATGGCTGGGTAATTGCCTaGGTAGTTTGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYGWVIA*VVWGFN
Trigger: ATTGAATCCCCAAACTACCCAGGCAATTACCCAGCC...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp AAATTTGGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTACACTCGGTGTTGGCTaGGTAATTGCCTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: KFGTCESAMSFPLILPAFTLGVG*VIAWVV
Trigger: AACTACCCAGGCAATTACCCAGCCAACACCGAGTGT...AAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCACGTACACTCGGTGTTaGCTGGGTAATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FNNTENSSSRNDREALLATYTRC*LGNCLG
Trigger: ACCCAGGCAATTACCCAGCCAACACCGAGTGTACGT...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGATCATATGTCACGTATaGGACCTGGAACCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRIICHV*DLEPSS
Trigger: GCTAGAGGGTTCCAGGTCCCATACGTGACATATGAT...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAGAATATTCACCAGGTTaGCACAGACCTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVEYSPG*HRPPHS
Trigger: TGAATGTGGAGGTCTGTGTCAACCTGGTGAATATTC...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp AGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTTGTCATCATTGGACTTGAACTaGATCCACAGCTTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: SNVFSPHLACLSEHVCLSSLDLN*IHSFFD
Trigger: GTCAAAGAAGCTGTGGATTCAGTTCAAGTCCAATGA...TGACAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR TCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTGCAGAACATTTGTATTaGGTGGCACGTGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVAEHLY*VARGLS
Trigger: ACTCAGCCCACGTGCCACTCAATACAAATGTTCTGC...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTACAGCAGTGAGAAGCTaGTGCCACTCAAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVTAVRS*CHSKPF
Trigger: GAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGT...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp GAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTCTTGGGTGTTTGTTTaGCATTATTTCAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: EPCGRHLGPPQEILKLLVSWVFV*HYFRHH
Trigger: ATGATGCCTGAAATAATGTCAAACAAACACCCAAGA...GACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCCACATGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR GCA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCAAGTGCAACGATAATTaGCTGGAATATTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLKCNDN*LEYSNS
Trigger: ACTGTTTGAATATTCCAGGCAATTATCGTTGCACTT...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAAGTATCCTTACAGGTaGGGTCACAGCCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFKYPYR*GHSLHC
Trigger: ACAATGGAGGCTGTGACCGCACCTGTAAGGATACTT...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GGAAGCTTGCAACGAGGAAGGCTGGCAATAAATGTACATTATTATGTCTCCAGAATCCAACAGGACAACTaGAGTGGACACCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GSLQRGRLAINVHYYVSRIQQDN*SGHLSK
Trigger: CTTCGACAGGTGTCCACTGCAGTTGTCCTGTTGGAT...TCTGGAGACATAATAATGTACATTTATTGCCAGCCTTCCTCGTTGCAAGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAGCCGCAGTCAAAACTaGCCACGATGTTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFSRSQN*PRCFCR
Trigger: TCTGCAAAAACATCGTGGGCAGTTTTGACTGCGGCT...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp ATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCCAGATGCATAGAGCCTaGCATCTCGAACTATGTCTT +
Preference number: 4 (lower is better)
Translates to: MPLKAILSLHPRCWERKTQMHRA*HLELCL
Trigger: AAGACATAGTTCGAGATGGCAGGCTCTATGCATCTG...GGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATCAGATGCATAGAGCCTaGCATCTCGAACTATGTCTT +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYQMHRA*HLELCL
Trigger: AAGACATAGTTCGAGATGGCAGGCTCTATGCATCTG...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTGCAACGATAATTGCCTaGAATATTCAAACAGTCATG +
Preference number: 4 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAATIIA*NIQTVM
Trigger: CATGACTGTTTGAATATTCCAGGCAATTATCGTTGC...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAGCAACGATAATTGCCTaGAATATTCAAACAGTCATG +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTATIIA*NIQTVM
Trigger: CATGACTGTTTGAATATTCCAGGCAATTATCGTTGC...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACCTCCATTGCGGGTCTaGCACTCATCAATATCTTTA +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVPPLRV*HSSISL
Trigger: TAAAGATATTGATGAGTGCCAGACCCGCAATGGAGG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCTGGTTGATGCAGCTGTaGTCACAGGTCCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFWLMQL*SQVLSK
Trigger: TTTGGATAGGACCTGTGACCACAGCTGCATCAACCA...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCATGTCCTTCCTCATTTTaGAAGGTTCCATTTGGACAT +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPCPSSF*KVPFGH
Trigger: ATGTCCAAATGGAACCTTCCAAAATGAGGAAGGACA...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCTACATCGGTGAGTGGTaGTGTTGTAGAAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: MPLKAILSLHPRCWERKTYIGEW*CCRNVQ
Trigger: CTGGACATTTCTACAACACCACCACTCACCGATGTA...GGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATACATCGGTGAGTGGTaGTGTTGTAGAAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVYIGEW*CCRNVQ
Trigger: CTGGACATTTCTACAACACCACCACTCACCGATGTA...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGTACATCGGTGAGTGGTaGTGTTGTAGAAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRYIGEW*CCRNVQ
Trigger: CTGGACATTTCTACAACACCACCACTCACCGATGTA...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATATTGCCTGGGTAGTTTaGGGATTCAATGTACCCAGT +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYIAWVV*GFNVPS
Trigger: ACTGGGTACATTGAATCCCCAAACTACCCAGGCAAT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp GTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTTGATGTTGTCACAGAATTaGATGAAGAGGTTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VSNVFSPHLACLSEHVCLMLSQN*MKRFSA
Trigger: TGCGGAAAACCTCTTCATCCAATTCTGTGACAACAT...CAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp AAATTTGGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTATCATATGTCACGTATaGGACCTGGAACCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: KFGTCESAMSFPLILPAFIICHV*DLEPSS
Trigger: GCTAGAGGGTTCCAGGTCCCATACGTGACATATGAT...AAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCGTATTGAGTGGCACGTaGGCTGAGTCATTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFVLSGT*AESFVR
Trigger: CCTTACAAATGACTCAGCCCACGTGCCACTCAATAC...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ATTGTCAGTGTCCCCAAATGCCTGTTAAAATTTGGCACTTGTGAGTCAGCAATGAGCTGGCTCCGAAGTTaGCTCTGTTCAAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: IVSVPKCLLKFGTCESAMSWLRS*LCSKQR
Trigger: TCTCTGCTTTGAACAGAGCCAACTTCGGAGCCAGCT...CATTGCTGACTCACAAGTGCCAAATTTTAACAGGCATTTGGGGACACTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp CATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTGTTTGTTTGCCAGTTGGTTGCTTTTaGGTAGATGAGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HLGPPQEILKLLVLGVCLPVGCF*VDEALC
Trigger: ACAGAGAGCCTCATCTACCCAAAAGCAACCAACTGG...CAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR TCA 90 bp ATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCATGTTTTTGCAGAAATaGTCACAACCTCCATTGCGG +
Preference number: 4 (lower is better)
Translates to: MPLKAILSLHPRCWERKTMFLQK*SQPPLR
Trigger: CCGCAATGGAGGTTGTGATCATTTCTGCAAAAACAT...GGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGGTAGAAATGTCCAGGTaGACATTGAACTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRVEMSR*TLNSGF
Trigger: GAAACCAGAGTTCAATGTTCACCTGGACATTTCTAC...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAAAGTGCAACGATAATTaGCTGGAATATTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTKCNDN*LEYSNS
Trigger: ACTGTTTGAATATTCCAGGCAATTATCGTTGCACTT...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp AAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAATTCTGATGGTTCTCAGATaGATAGAGCCTGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: KPFSVYIHDAGKEKPSSILMVLR*IEPAIS
Trigger: CGAGATGGCAGGCTCTATGCATCTGAGAACCATCAG...AATTGAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAAGTCTACATCCACGATaGTGGGAAAGAAAAACCAAG +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKSLHPR*WERKTK
Trigger: CTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACT...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGGCAACGATAATTGCCTaGAATATTCAAACAGTCATG +
Preference number: 4 (lower is better)
Translates to: NSNESLIREAAIPDCADMATIIA*NIQTVM
Trigger: CATGACTGTTTGAATATTCCAGGCAATTATCGTTGC...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp AAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAATTACAGGACAACTGCAGTaGACACCTGTCGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: KPFSVYIHDAGKEKPSSITGQLQ*TPVEVS
Trigger: GGATACTTCGACAGGTGTCCACTGCAGTTGTCCTGT...AATTGAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGAATTTCCTGGTCTTaGGCATGGTTCACAAGTCAT +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRRISWS*AWFTSH
Trigger: ATGACTTGTGAACCATGCCCAAGACCAGGAAATTCT...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCGTGAACATTGAACTCTaGTTTCACAGTCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: MPLKAILSLHPRCWERKTVNIEL*FHSPER
Trigger: CCTTTCAGGACTGTGAAACCAGAGTTCAATGTTCAC...GGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAAGTCGTAGTATTTCCTaGGCAAGAAACACAATTATT +
Preference number: 4 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTSRSIS*ARNTII
Trigger: AATAATTGTGTTTCTTGCCCAGGAAATACTACGACT...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCACTGGGTTATGTTTGTaGAGCCATCAAAGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFTGLCL*SHQSQS
Trigger: CGACTGACTTTGATGGCTCCACAAACATAACCCAGT...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAAGGTCTCAAAAACCTaGACACTTTGGAACGTAGCA +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRKVSKT*TLWNVA
Trigger: TGCTACGTTCCAAAGTGTCCAGGTTTTTGAGACCTT...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp ATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGGTCTCAAAAACCTaGACACTTTGGAACGTAGCA +
Preference number: 4 (lower is better)
Translates to: MPLKAILSLHPRCWERKTKVSKT*TLWNVA
Trigger: TGCTACGTTCCAAAGTGTCCAGGTTTTTGAGACCTT...GGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATAAGGTCTCAAAAACCTaGACACTTTGGAACGTAGCA +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYKVSKT*TLWNVA
Trigger: TGCTACGTTCCAAAGTGTCCAGGTTTTTGAGACCTT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CCA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAAAGGTCTCAAAAACCTaGACACTTTGGAACGTAGCA +
Preference number: 4 (lower is better)
Translates to: LMPLKAILSLHPRCWERKKVSKT*TLWNVA
Trigger: TGCTACGTTCCAAAGTGTCCAGGTTTTTGAGACCTT...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CCA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGATGTTGTCACAGAATTaGATGAAGTTTTACACTGGG +
Preference number: 4 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKMLSQN*MKFYTG
Trigger: CCCAGTGTAAAACTTCATCCAATTCTGTGACAACAT...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450649.6
CDS-3UTR TCA 90 bp AAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAATTAAATTACATTTCACCTaGACTCCCCAGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KPFSVYIHDAGKEKPSSIKLHFT*TPQSLR
Trigger: CCTGAGGGACTGGGGAGTTCAGGTGAAATGTAATTT...AATTGAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR GCA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAAAGTGCAACGATAATTaGCTGGAATATTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPKCNDN*LEYSNS
Trigger: ACTGTTTGAATATTCCAGGCAATTATCGTTGCACTT...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR GCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATAGCCATCAAAACAAGTaGAACGATAATTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYSHQNK*NDNCLE
Trigger: TTCCAGGCAATTATCGTTGCACTTGTTTTGATGGCT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAAGCCATCAAAACAAGTaGAACGATAATTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVSHQNK*NDNCLE
Trigger: TTCCAGGCAATTATCGTTGCACTTGTTTTGATGGCT...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR GCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTTCTTTTACTGAGCTGTaGTTCTCTGGTAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVSFTEL*FSGSAG
Trigger: ACCAGCACTACCAGAGAAGCACAGCTCAGTAAAAGA...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CCA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATATGTTGTCACAGAATTaGATGAAGAGGTTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYMLSQN*MKRFSA
Trigger: TGCGGAAAACCTCTTCATCCAATTCTGTGACAACAT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR TCA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTTCATTGGACTTGAACTaGATCCACAGCTTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVSLDLN*IHSFFD
Trigger: GTCAAAGAAGCTGTGGATTCAGTTCAAGTCCAATGA...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR TCA 90 bp AAATTTGGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTAAAATTTGGCACTTGTaGGTCAGCAATGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KFGTCESAMSFPLILPAFKIWHL*VSNVFS
Trigger: GGAAAAGACATTGCTGACTCACAAGTGCCAAATTTT...AAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CCA 90 bp GGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTGTTTGTTTGACATTATGTTGTCACAGAATTaGATGAAGAGGTTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GSTPRDTKTPCLGCLFDIMLSQN*MKRFSA
Trigger: TGCGGAAAACCTCTTCATCCAATTCTGTGACAACAT...AATGTCAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR TCA 90 bp CTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCGAAATCGCCTTTTCATaGCAATTGATGATTCTCATC +
Preference number: 4 (lower is better)
Translates to: LKAILSLHPRCWERKTKFEIAFS*QLMILI
Trigger: GATGAGAATCATCAATTGTCATGAAAAGGCGATTTC...GAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CCA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGTCGTAGTATTTCCTaGGCAAGAAACACAATTATT +
Preference number: 4 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRSRSIS*ARNTII
Trigger: AATAATTGTGTTTCTTGCCCAGGAAATACTACGACT...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
3UTR CAA 72 bp GTAGGTAGTCCATCCATTAGGGAAGTGGTGGCTTGTTaGATTGGATTCCTTTTTATTCACTGTAATGAGATT +
Preference number: 4 (lower is better)
Translates to: VGSPSIREVVAC*IGFLFIHCNEI
Trigger: AATCTCATTACAGTGAATAAAAAGGAATCCAATCAAACAAGCCACCACTTCCCTAATGGATGGACTACCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CAA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCCACGGGGTGACACACTaGTGGGCAGGAGCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: VSRWVEGACRGLLPSPLAHGVTH*WAGAPS
Trigger: TGAAGGGGCTCCTGCCCACAAGTGTGTCACCCCGTG...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGACTGCCTGCCTTCCCCTaGGTAGCCAGGCTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: QSLHTSAEGSLREGRARGLPAFP*VARLAG
Trigger: TCCTGCAAGCCTGGCTACCAAGGGGAAGGCAGGCAG...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp GGTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCAGGGGCTCCTGGGACTaGCTTGCCAGAGCTGCATGT +
Preference number: 5 (lower is better)
Translates to: GLKVGGGSLQGSPSLPSCRGSWD*LARAAC
Trigger: ACATGCAGCTCTGGCAAGCAAGTCCCAGGAGCCCCT...GCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS GCA 90 bp GCTGCAGTGTGGCCTCTCACCCCCTCTGCAGGCAGGACGCTGCGCTaGAGCTCTCTGGGCCCTCTCCTCATCTCTTCAGAAGCATTTACC +
Preference number: 5 (lower is better)
Translates to: AAVWPLTPSAGRTLR*SSLGPLLISSEAFT
Trigger: GGTAAATGCTTCTGAAGAGATGAGGAGAGGGCCCAGAGAGCTGCAGCGCAGCGTCCTGCCTGCAGAGGGGGTGAGAGGCCACACTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534295.1
CDS CCA 90 bp TTCCCCTTTCCTCGGCCTTCTCCGAGAGAACTAAAGCTCTGTCCGTaGGCTCCAGGCAGACGGCTGCAGTGTGGCCTCTCACCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: FPFPRPSPRELKLCP*APGRRLQCGLSPPL
Trigger: CAGAGGGGGTGAGAGGCCACACTGCAGCCGTCTGCCTGGAGCCCACGGACAGAGCTTTAGTTCTCTCGGAGAAGGCCGAGGAAAGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534295.1
CDS-3UTR CAA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCCAGTCTCTCTGGTTCTaGGCCAGCTCAAAACCAGGC +
Preference number: 5 (lower is better)
Translates to: VSRWVEGACRGLLPSPLAQSLWF*ASSKPG
Trigger: GCCTGGTTTTGAGCTGGCCAAGAACCAGAGAGACTG...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS GCA 90 bp GGTTCTTGGCCAGCTCAAAACCAGGCCTGCACTCACAGGCGACGCTaGCCCTTGGGGCCTCCTTGCAGATGTGACTACAGCCGTGATCCT +
Preference number: 5 (lower is better)
Translates to: GSWPAQNQACTHRRR*PLGPPCRCDYSRDP
Trigger: AGGATCACGGCTGTAGTCACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCCTGTGAGTGCAGGCCTGGTTTTGAGCTGGCCAAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTTATTCCAGTGGAGCTaGTACCCAGGGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: SRWVEGACRGLLPSPLACLFQWS*YPGWHW
Trigger: CCAGTGCCACCCTGGGTACAAGCTCCACTGGAATAA...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCACACGGGGTGACACACTaGTGGGCAGGAGCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSHGVTH*WAGAPS
Trigger: TGAAGGGGCTCCTGCCCACAAGTGTGTCACCCCGTG...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS TCA 90 bp AGCAGGAGGATCAGTCGAACCTGGGACGCAGAGCAGAGGTTGCAGTaGGCTGTGATCACACCACCACACTCCAGCGTGGGCAGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: SRRISRTWDAEQRLQ*AVITPPHSSVGSKA
Trigger: GGCTTTGCTGCCCACGCTGGAGTGTGGTGGTGTGATCACAGCTCACTGCAACCTCTGCTCTGCGTCCCAGGTTCGACTGATCCTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534295.1
CDS-3UTR CAA 90 bp GCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCCATGGATGGCTCAGCGGTaGCGGGCAGAGGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: AHSSEKLMPLKAILSLHPWMAQR*RAEAAE
Trigger: CTCCGCCGCCTCTGCCCGCAACCGCTGAGCCATCCA...TGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp TCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTCCACTACAGACTCCTaGAGGAGGAGTAAGACCCCA +
Preference number: 5 (lower is better)
Translates to: SRWVEGACRGLLPSPLACSTTDS*RRSKTP
Trigger: TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA...ACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS TCA 90 bp TGCCTGAGAGCTGGAGGTGAAACTGCTCCCTGTGGACGGCCTTTCTaGGCGTGCGGATGGCTTTACGGAGCCGCTTCTCGGTTCGCTTTA +
Preference number: 5 (lower is better)
Translates to: CLRAGGETAPCGRPF*ACGWLYGAASRFAL
Trigger: TAAAGCGAACCGAGAAGCGGCTCCGTAAAGCCATCCGCACGCTCAGAAAGGCCGTCCACAGGGAGCAGTTTCACCTCCAGCTCTCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS TCA 90 bp AGGCCCCTTGCAGTCCTGAAGAGAGGTGAATGCCAGAGTGACATCTaGGGAAGCACCCGTCTCCTCCACCACTCTTACCGCAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: RPLAVLKRGECQSDI*GSTRLLHHSYRSAG
Trigger: CCCTGCACTGCGGTAAGAGTGGTGGAGGAGACGGGTGCTTCCTCAGATGTCACTCTGGCATTCACCTCTCTTCAGGACTGCAAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520467.5
ENST00000649792.2
CDS GCA 90 bp TCCAGGACAGTGTCCTCTCGCTCAAGGCAGCTCCTCCCATCTGTGTaGATCTTGTACTGTGGATGGCAGCTGCACTCTGGGCCATCGGCT +
Preference number: 5 (lower is better)
Translates to: SRTVSSRSRQLLPSV*ILYCGWQLHSGPSA
Trigger: AGCCGATGGCCCAGAGTGCAGCTGCCATCCACAGTACAAGATGCACACAGATGGGAGGAGCTGCCTTGAGCGAGAGGACACTGTCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS CCA 90 bp GGCCAGCTCAAAACCAGGCCTGCACTCACAGGCGACGCTGCCCCTTaGGGCCTCCTTGCAGATGTGACTACAGCCGTGATCCTTATTCAT +
Preference number: 5 (lower is better)
Translates to: GQLKTRPALTGDAAP*GLLADVTTAVILIH
Trigger: ATGAATAAGGATCACGGCTGTAGTCACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCCTGTGAGTGCAGGCCTGGTTTTGAGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS CCA 90 bp CCTCCCATCTGTGTGCATCTTGTACTGTGGATGGCAGCTGCACTCTaGGCCATCGGCTGTATCGTCACAGGAGTGCTGGCACCCACCGTT +
Preference number: 5 (lower is better)
Translates to: PPICVHLVLWMAAAL*AIGCIVTGVLAPTV
Trigger: AACGGTGGGTGCCAGCACTCCTGTGACGATACAGCCGATGGCCCAGAGTGCAGCTGCCATCCACAGTACAAGATGCACACAGATGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCCAGAATTTCCTGGTCTaGGGCATGGTTCACAAGTCA +
Preference number: 5 (lower is better)
Translates to: VSRWVEGACRGLLPSPLAQNFLV*GMVHKS
Trigger: TGACTTGTGAACCATGCCCAAGACCAGGAAATTCTG...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAAGGCGACGCTGCCCCTaGGGGCCTCCTTGCAGATGT +
Preference number: 5 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTRRRCP*GPPCRC
Trigger: ACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCCT...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCATTATTCCAGTGGAGCTaGTACCCAGGGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSLFQWS*YPGWHW
Trigger: CCAGTGCCACCCTGGGTACAAGCTCCACTGGAATAA...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGGCTCCTGGGACTTGCTaGCCAGAGCTGCATGTAAGG +
Preference number: 5 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMAPGTC*PELHVR
Trigger: CCTTACATGCAGCTCTGGCAAGCAAGTCCCAGGAGC...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGACAGAATTTCCTGGTCTaGGGCATGGTTCACAAGTCA +
Preference number: 5 (lower is better)
Translates to: QSLHTSAEGSLREGRARGQNFLV*GMVHKS
Trigger: TGACTTGTGAACCATGCCCAAGACCAGGAAATTCTG...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCAGAATATTCACCAGGTaGACACAGACCTCCACATTC +
Preference number: 5 (lower is better)
Translates to: VSRWVEGACRGLLPSPLARIFTR*TQTSTF
Trigger: GAATGTGGAGGTCTGTGTCAACCTGGTGAATATTCT...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAATTGCCTGGGTAGTTaGGGGATTCAATGTACCCAG +
Preference number: 5 (lower is better)
Translates to: QSLHTSAEGSLREGRARGNCLGS*GIQCTQ
Trigger: CTGGGTACATTGAATCCCCAAACTACCCAGGCAATT...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTTTCCTGGGATCAAACTaGTATCACACAGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: ACTRVQRAPLERAGLEEAFLGSN*YHTGWR
Trigger: TCTCCAGCCTGTGTGATACAAGTTTGATCCCAGGAA...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS TCA 90 bp TGGCCAGGCTCGGTCAGTCTCCAAGCCATCAGTTGCAACTCAGTATaGGGCCTTGTCTGGGGCCAACACTGCATGATCCTCACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: WPGSVSLQAISCNSV*GLVWGQHCMILTGS
Trigger: AGAGCCAGTGAGGATCATGCAGTGTTGGCCCCAGACAAGGCCTCATACTGAGTTGCAACTGATGGCTTGGAGACTGACCGAGCCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS TCA 90 bp CAAGCAGCAGCAGCCCAGGCTGTACCGTTCACTGTAGGAGCTGGGTaGGGGCCTCCCATTCCAGAACTGACCTGCTGTCATCTAATTGTC +
Preference number: 5 (lower is better)
Translates to: QAAAAQAVPFTVGAG*GPPIPELTCCHLIV
Trigger: GACAATTAGATGACAGCAGGTCAGTTCTGGAATGGGAGGCCCTCACCCAGCTCCTACAGTGAACGGTACAGCCTGGGCTGCTGCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS CCA 90 bp TTGGCAAGCAGCAGCAGCCCAGGCTGTACCGTTCACTGTAGGAGCTaGGTGAGGGCCTCCCATTCCAGAACTGACCTGCTGTCATCTAAT +
Preference number: 5 (lower is better)
Translates to: LASSSSPGCTVHCRS*VRASHSRTDLLSSN
Trigger: ATTAGATGACAGCAGGTCAGTTCTGGAATGGGAGGCCCTCACCCAGCTCCTACAGTGAACGGTACAGCCTGGGCTGCTGCTGCTTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS-3UTR CAA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATGGATGGCTCAGCGGTaGCGGGCAGAGGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVWMAQR*RAEAAE
Trigger: CTCCGCCGCCTCTGCCCGCAACCGCTGAGCCATCCA...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGGATGGCTCAGCGGTaGCGGGCAGAGGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYWMAQR*RAEAAE
Trigger: CTCCGCCGCCTCTGCCCGCAACCGCTGAGCCATCCA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAAGGCGACGCTGCCCCTaGGGGCCTCCTTGCAGATGT +
Preference number: 5 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPRRRCP*GPPCRC
Trigger: ACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCCT...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCACCATCTGTGTGCATCTaGTACTGTGGATGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSPSVCI*YCGWQL
Trigger: CAGCTGCCATCCACAGTACAAGATGCACACAGATGG...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAAGGGGCTCCTGGGACTaGCTTGCCAGAGCTGCATGT +
Preference number: 5 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLRGSWD*LARAAC
Trigger: ACATGCAGCTCTGGCAAGCAAGTCCCAGGAGCCCCT...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp GTCTCAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCAGCTGTCACCTCCTTTaGGTTAGTTTCAAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: VSRWVEGACRGLLPSPLASCHLL*VSFKLK
Trigger: TTTGAGCTTGAAACTAACCAAAAGGAGGTGACAGCT...GGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS GCA 90 bp GACACATTGGTTTTCTGCATGACCCTGGCCCACTCCACAGGACTCTaGCTGGCGTTCAGATGTTCTGGGAGGCTTTTTAGCCACGTCGAG +
Preference number: 5 (lower is better)
Translates to: DTLVFCMTLAHSTGL*LAFRCSGRLFSHVE
Trigger: CTCGACGTGGCTAAAAAGCCTCCCAGAACATCTGAACGCCAGGCAGAGTCCTGTGGAGTGGGCCAGGGTCATGCAGAAAACCAATGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS GCA 90 bp AGTGCTGACCGCAGTTCCCACCTCAGTCAGAGAGCACACAGTCAATaGTGTGGTGCTTCTGACCCTGAGTCAATGGCACATGAGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SADRSSHLSQRAHSQ*CGASDPESMAHECL
Trigger: CAGGCACTCATGTGCCATTGACTCAGGGTCAGAAGCACCACAGCATTGACTGTGTGCTCTCTGACTGAGGTGGGAACTGCGGTCAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS GCA 90 bp ACCACATTGGTTTTCTGCATGACCCTGGCCCACTCCACAGGACTCTaGCTGGCGTTCAGATGTTCTGGGAGGCTTTTTAGCCACGTCGAG +
Preference number: 5 (lower is better)
Translates to: TTLVFCMTLAHSTGL*LAFRCSGRLFSHVE
Trigger: CTCGACGTGGCTAAAAAGCCTCCCAGAACATCTGAACGCCAGGCAGAGTCCTGTGGAGTGGGCCAGGGTCATGCAGAAAACCAATGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520467.5
CDS-3UTR CAA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGCTGCCTGCCTTCCCCTaGGTAGCCAGGCTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKLPAFP*VARLAG
Trigger: TCCTGCAAGCCTGGCTACCAAGGGGAAGGCAGGCAG...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTAGCTCCTGGGACTTGCTaGCCAGAGCTGCATGTAAGG +
Preference number: 5 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLAPGTC*PELHVR
Trigger: CCTTACATGCAGCTCTGGCAAGCAAGTCCCAGGAGC...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTAGCTGTCACCTCCTTTaGGTTAGTTTCAAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVSCHLL*VSFKLK
Trigger: TTTGAGCTTGAAACTAACCAAAAGGAGGTGACAGCT...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCACCTGCAACTGACACATaGGTTTTCTGCATGACCCTG +
Preference number: 5 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSPATDT*VFCMTL
Trigger: CAGGGTCATGCAGAAAACCAATGTGTCAGTTGCAGG...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp GCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTTTGTCCTTCCTCATTTaGGAAGGTTCCATTTGGACA +
Preference number: 5 (lower is better)
Translates to: ACTRVQRAPLERAGLEEALSFLI*EGSIWT
Trigger: TGTCCAAATGGAACCTTCCAAAATGAGGAAGGACAA...AGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTTATGTTGTCACAGAATaGGATGAAGAGGTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVYVVTE*DEEVFR
Trigger: GCGGAAAACCTCTTCATCCAATTCTGTGACAACATA...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS TCA 90 bp TTCAGATGTTCTGGGAGGCTTTTTAGCCACGTCGAGGTTCATGCCTaGGAGCTGGAGGTGAAACTGCTCCCTGTGGACGGCCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: FRCSGRLFSHVEVHA*ELEVKLLPVDGLSE
Trigger: CTCAGAAAGGCCGTCCACAGGGAGCAGTTTCACCTCCAGCTCTCAGGCATGAACCTCGACGTGGCTAAAAAGCCTCCCAGAACATCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS CCA 90 bp CTGAGCATGTGTGCTTGTCAGCAGTTTGCCAGCTGGCTCCGAAGTTaGCTCTGTTCAAAGCAGAGACGCTCTTTCCATGTGCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LSMCACQQFASWLRS*LCSKQRRSFHVLQA
Trigger: AGCCTGCAGCACATGGAAAGAGCGTCTCTGCTTTGAACAGAGCCAACTTCGGAGCCAGCTGGCAAACTGCTGACAAGCACACATGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CAA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAAGGCGACGCTGCCCCTaGGGGCCTCCTTGCAGATGT +
Preference number: 5 (lower is better)
Translates to: LMPLKAILSLHPRCWERKRRRCP*GPPCRC
Trigger: ACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCCT...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCCAGTCTCTCTGGTTCTaGGCCAGCTCAAAACCAGGC +
Preference number: 5 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKAQSLWF*ASSKPG
Trigger: GCCTGGTTTTGAGCTGGCCAAGAACCAGAGAGACTG...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp ATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTACAGTCTCTCTGGTTCTaGGCCAGCTCAAAACCAGGC +
Preference number: 5 (lower is better)
Translates to: IPDCADMQKEDSSVPPTLQSLWF*ASSKPG
Trigger: GCCTGGTTTTGAGCTGGCCAAGAACCAGAGAGACTG...TAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp CAGAGCCTGCACACGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGATGGTTCACAAGTCATTaGTCCTTCCTCATTTTGGAA +
Preference number: 5 (lower is better)
Translates to: QSLHTSAEGSLREGRARGWFTSH*SFLILE
Trigger: TTCCAAAATGAGGAAGGACAAATGACTTGTGAACCA...TCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCGTGTGCAGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CAAGGTGGGTGGAGGGAGCCTGCAGGGGTCTCCTTCCCTCCCCTCTTGCCTGTTTGGTTCACAAGTCATTaGTCCTTCCTCATTTTGGAA +
Preference number: 5 (lower is better)
Translates to: QGGWREPAGVSFPPLLPVWFTSH*SFLILE
Trigger: TTCCAAAATGAGGAAGGACAAATGACTTGTGAACCA...AACAGGCAAGAGGGGAGGGAAGGAGACCCCTGCAGGCTCCCTCCACCCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGAGCAGAACATTTGTATaGAGTGGCACGTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMSRTFV*SGTWAE
Trigger: CTCAGCCCACGTGCCACTCAATACAAATGTTCTGCT...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCACTGCAGGGTGGAAGCTaGCAACGAGGAAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPLQGGS*QRGRLA
Trigger: TGCCAGCCTTCCTCGTTGCAAGCTTCCACCCTGCAG...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CAA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATTGGGGAGTAGAACCCTaGGCAATACCGACTCAGGGT +
Preference number: 5 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHWGVEP*AIPTQG
Trigger: ACCCTGAGTCGGTATTGCCAAGGGTTCTACTCCCCA...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS GCA 90 bp GGCTCCGAAGTTGGCTCTGTTCAAAGCAGAGACGCTCTTTCCATGTaGTGCAGGCTGTGCTTACCATCATATGTCACGTATGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: GSEVGSVQSRDALSM*CRLCLPSYVTYGTW
Trigger: CCAGGTCCCATACGTGACATATGATGGTAAGCACAGCCTGCAGCACATGGAAAGAGCGTCTCTGCTTTGAACAGAGCCAACTTCGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CAA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTATTCCAGTGGAGCTaGTACCCAGGGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTLFQWS*YPGWHW
Trigger: CCAGTGCCACCCTGGGTACAAGCTCCACTGGAATAA...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACACGGGGTGACACACTaGTGGGCAGGAGCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVHGVTH*WAGAPS
Trigger: TGAAGGGGCTCCTGCCCACAAGTGTGTCACCCCGTG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGGCTCCTGGGACTTGCTaGCCAGAGCTGCATGTAAGG +
Preference number: 5 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKAPGTC*PELHVR
Trigger: CCTTACATGCAGCTCTGGCAAGCAAGTCCCAGGAGC...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp CGAGTGCAGAGGGCTCCCTTAGAGAGGGCCGGGCTAGAGGAAGCTGAAGTTTCAAAAAACCTGGACACTTaGGAACGTAGCAATCGGATG +
Preference number: 5 (lower is better)
Translates to: RVQRAPLERAGLEEAEVSKNLDT*ERSNRM
Trigger: CATCCGATTGCTACGTTCCAAAGTGTCCAGGTTTTT...TGAAACTTCAGCTTCCTCTAGCCCGGCCCTCTCTAAGGGAGCCCTCTGCACTCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCTCCACTACAGACTCCTaGAGGAGGAGTAAGACCCCA +
Preference number: 5 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKASTTDS*RRSKTP
Trigger: TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGTCAGCATAGTGCATTaGCTGCAGGGTGGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLVSIVH*LQGGSL
Trigger: CAAGCTTCCACCCTGCAGCAAATGCACTATGCTGAC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CAA 90 bp GCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATCCAGTCCGTCTCTCACATTaGAGACTGGGGAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: AHSSEKLMPLKAILSLHPVRLSH*RLGKEG
Trigger: GCCTTCCTTCCCCAGTCTCAAATGTGAGAGACGGAC...TGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS TCA 90 bp ACTCTCCAAATGAGACCAACTTCAGTCCAACCTGTTACCCAGTGCTaGCCGCAGTTCCCACCTCAGTCAGAGAGCACACAGTCAATGCTG +
Preference number: 5 (lower is better)
Translates to: TLQMRPTSVQPVTQC*PQFPPQSESTQSML
Trigger: CAGCATTGACTGTGTGCTCTCTGACTGAGGTGGGAACTGCGGTCAGCACTGGGTAACAGGTTGGACTGAAGTTGGTCTCATTTGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS CCA 90 bp ACCAGGTTGACACAGACCTCCACATTCAGACATATTCCAAGCTTCTaGGGTCTTCAGGGCCCCAGAATTTCCTGGTCTTGGGCATGGTTC +
Preference number: 5 (lower is better)
Translates to: TRLTQTSTFRHIPSF*GLQGPRISWSWAWF
Trigger: GAACCATGCCCAAGACCAGGAAATTCTGGGGCCCTGAAGACCCCAGAAGCTTGGAATATGTCTGAATGTGGAGGTCTGTGTCAACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS CCA 90 bp AACCAAGAAGTCAAGTGTCAACTGCTTCCAAAGTATGGGAAGGCCTaGGTAGTTCTCAGGCTTAGGCCTACACACTGCCTAGGCATCCCC +
Preference number: 5 (lower is better)
Translates to: NQEVKCQLLPKYGKA*VVLRLRPTHCLGIP
Trigger: GGGGATGCCTAGGCAGTGTGTAGGCCTAAGCCTGAGAACTACCCAGGCCTTCCCATACTTTGGAAGCAGTTGACACTTGACTTCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS CCA 90 bp AGAGAGCACACAGTCAATGCTGTGGTGCTTCTGACCCTGAGTCAATaGCACATGAGTGCCTGCTGTTTACACACAGGGCTACACAGCACA +
Preference number: 5 (lower is better)
Translates to: REHTVNAVVLLTLSQ*HMSACCLHTGLHST
Trigger: TGTGCTGTGTAGCCCTGTGTGTAAACAGCAGGCACTCATGTGCCATTGACTCAGGGTCAGAAGCACCACAGCATTGACTGTGTGCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS CCA 90 bp GAAAGATTCAGAATGTGTGCCCGAGATCATAGAACTAGTAAGAGGTaGAACTGGGACAGAGATCCAGGCAGTCTGGCTGCAGAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: ERFRMCARDHRTSKR*NWDRDPGSLAAESP
Trigger: GGGGCTCTCTGCAGCCAGACTGCCTGGATCTCTGTCCCAGTTCCACCTCTTACTAGTTCTATGATCTCGGGCACACATTCTGAATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS-3UTR CAA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCAGGCGACGCTGCCCCTaGGGGCCTCCTTGCAGATGT +
Preference number: 5 (lower is better)
Translates to: FNNTENSSSRNDREALLARRRCP*GPPCRC
Trigger: ACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCCT...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CAA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGCAGTCTCTCTGGTTCTaGGCCAGCTCAAAACCAGGC +
Preference number: 5 (lower is better)
Translates to: NSNESLIREAAIPDCADMQSLWF*ASSKPG
Trigger: GCCTGGTTTTGAGCTGGCCAAGAACCAGAGAGACTG...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTCCATCTGTGTGCATCTaGTACTGTGGATGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAPSVCI*YCGWQL
Trigger: CAGCTGCCATCCACAGTACAAGATGCACACAGATGG...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTAGGGTGTACCCTCGGTaGCAAGCACAAGCAAATGTG +
Preference number: 5 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWARVYPR*QAQANV
Trigger: CACATTTGCTTGTGCTTGCAACCGAGGGTACACCCT...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATTTGATGCTGCACTCATaGGTGTCTCCACAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHLMLHS*VSPQWV
Trigger: CACCCACTGTGGAGACACCAATGAGTGCAGCATCAA...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGAGAATATTCACCAGGTaGACACAGACCTCCACATTC +
Preference number: 5 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMRIFTR*TQTSTF
Trigger: GAATGTGGAGGTCTGTGTCAACCTGGTGAATATTCT...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAATTGCCTGGGTAGTTaGGGGATTCAATGTACCCAG +
Preference number: 5 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPNCLGS*GIQCTQ
Trigger: CTGGGTACATTGAATCCCCAAACTACCCAGGCAATT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp TCTGTCTCTCTCAGCAGAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGAGATAATTGCCTGGGTAGTTaGGGGATTCAATGTACCCAG +
Preference number: 5 (lower is better)
Translates to: SVSLSRAMWEAFGSTPRDNCLGS*GIQCTQ
Trigger: CTGGGTACATTGAATCCCCAAACTACCCAGGCAATT...ATCTCTTGGGGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAGAGAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CAA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGAAAAACCTGGACACTTaGGAACGTAGCAATCGGATG +
Preference number: 5 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMKNLDT*ERSNRM
Trigger: CATCCGATTGCTACGTTCCAAAGTGTCCAGGTTTTT...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCAGCAGAACATTTGTATaGAGTGGCACGTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLSRTFV*SGTWAE
Trigger: CTCAGCCCACGTGCCACTCAATACAAATGTTCTGCT...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS GCA 90 bp TCCGAAGTTGGCTCTGTTCAAAGCAGAGACGCTCTTTCCATGTGCTaGAGGCTGTGCTTACCATCATATGTCACGTATGGGACCTGGAAC +
Preference number: 5 (lower is better)
Translates to: SEVGSVQSRDALSMC*RLCLPSYVTYGTWN
Trigger: GTTCCAGGTCCCATACGTGACATATGATGGTAAGCACAGCCTGCAGCACATGGAAAGAGCGTCTCTGCTTTGAACAGAGCCAACTTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS CCA 90 bp TTCAGAATGTGTGCCCGAGATCATAGAACTAGTAAGAGGTGGAACTaGGACAGAGATCCAGGCAGTCTGGCTGCAGAGAGCCCCTCATTA +
Preference number: 5 (lower is better)
Translates to: FRMCARDHRTSKRWN*DRDPGSLAAESPSL
Trigger: TAATGAGGGGCTCTCTGCAGCCAGACTGCCTGGATCTCTGTCCCAGTTCCACCTCTTACTAGTTCTATGATCTCGGGCACACATTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS-3UTR CAA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGAGGGTGTACCCTCGGTaGCAAGCACAAGCAAATGTG +
Preference number: 5 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKRVYPR*QAQANV
Trigger: CACATTTGCTTGTGCTTGCAACCGAGGGTACACCCT...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAAAAACCTGGACACTTaGGAACGTAGCAATCGGATG +
Preference number: 5 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPKNLDT*ERSNRM
Trigger: CATCCGATTGCTACGTTCCAAAGTGTCCAGGTTTTT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTAGCAGAACATTTGTATaGAGTGGCACGTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWASRTFV*SGTWAE
Trigger: CTCAGCCCACGTGCCACTCAATACAAATGTTCTGCT...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCTTCCTGGGATCAAACTaGTATCACACAGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLFLGSN*YHTGWR
Trigger: TCTCCAGCCTGTGTGATACAAGTTTGATCCCAGGAA...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp GTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTTGTCTGAGCATGTGTGCTaGTCAGCAGTTTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VSNVFSPHLACLSEHVCLSEHVC*SAVCQL
Trigger: CAGCTGGCAAACTGCTGACAAGCACACATGCTCAGA...CAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CAA 90 bp GCTCTCTGTCTCTCTCAGCAGAGCCATGTGGGAGGCATTTGGGTCCACCCCAAGGTCTTGGGTGTTTGTTaGACATTATTTCAGGCATCA +
Preference number: 5 (lower is better)
Translates to: ALCLSQQSHVGGIWVHPKVLGVC*TLFQAS
Trigger: TGATGCCTGAAATAATGTCAAACAAACACCCAAGAC...CTTGGGGTGGACCCAAATGCCTCCCACATGGCTCTGCTGAGAGAGACAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS GCA 90 bp AATGCTGTGGTGCTTCTGACCCTGAGTCAATGGCACATGAGTGCCTaGTGTTTACACACAGGGCTACACAGCACAGTGCAAAGATGGAAA +
Preference number: 5 (lower is better)
Translates to: NAVVLLTLSQWHMSA*CLHTGLHSTVQRWK
Trigger: TTTCCATCTTTGCACTGTGCTGTGTAGCCCTGTGTGTAAACAGCAGGCACTCATGTGCCATTGACTCAGGGTCAGAAGCACCACAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS-3UTR CAA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGAATTTAAATCCTTTCTaGCAGCCGCAGTCAAAACTG +
Preference number: 5 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMNLNPF*QPQSKL
Trigger: CAGTTTTGACTGCGGCTGCAAGAAAGGATTTAAATT...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTATTCCAGTGGAGCTaGTACCCAGGGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVLFQWS*YPGWHW
Trigger: CCAGTGCCACCCTGGGTACAAGCTCCACTGGAATAA...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp GATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCTACACTGGGTTATGTTaGTGGAGCCATCAAAGTCAG +
Preference number: 5 (lower is better)
Translates to: DLSKTSAHSSEKLMPLKAYTGLC*WSHQSQ
Trigger: CTGACTTTGATGGCTCCACAAACATAACCCAGTGTA...GGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TTTGCTTTCTTCCTGATTCCAGATAGGAGAGGTTGCCAGTTGGTTGCTTTTGGGCCATGTGGGAGGCATTaGGGTCCACCCCAAGAGATA +
Preference number: 5 (lower is better)
Translates to: FAFFLIPDRRGCQLVAFGPCGRH*GPPQEI
Trigger: TATCTCTTGGGGTGGACCCAAATGCCTCCCACATGG...CCCAAAAGCAACCAACTGGCAACCTCTCCTATCTGGAATCAGGAAGAAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CAA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAGAATATTCACCAGGTaGACACAGACCACATTGGTT +
Preference number: 5 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPRIFTR*TQTTLV
Trigger: AACCAATGTGGTCTGTGTCAACCTGGTGAATATTCT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520467.5
CDS-3UTR CAA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTACCATCTGTGTGCATCTaGTACTGTGGATGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVPSVCI*YCGWQL
Trigger: CAGCTGCCATCCACAGTACAAGATGCACACAGATGG...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp CAATACCCGACTGTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCAATTTAAATCCTTTCTaGCAGCCGCAGTCAAAACTG +
Preference number: 5 (lower is better)
Translates to: QYPTVLTCRRKTALSHQPNLNPF*QPQSKL
Trigger: CAGTTTTGACTGCGGCTGCAAGAAAGGATTTAAATT...GGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCACAGTCGGGTATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATAGGGTGTACCCTCGGTaGCAAGCACAAGCAAATGTG +
Preference number: 5 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYRVYPR*QAQANV
Trigger: CACATTTGCTTGTGCTTGCAACCGAGGGTACACCCT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTTGATGCTGCACTCATaGGTGTCTCCACAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYLMLHS*VSPQWV
Trigger: CACCCACTGTGGAGACACCAATGAGTGCAGCATCAA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGCAGAATTTCCTGGTCTaGGGCATGGTTCACAAGTCA +
Preference number: 5 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKQNFLV*GMVHKS
Trigger: TGACTTGTGAACCATGCCCAAGACCAGGAAATTCTG...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp GTGCTGACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACAAAAAACCTGGACACTTaGGAACGTAGCAATCGGATG +
Preference number: 5 (lower is better)
Translates to: VLTCRRKTALSHQPYSRTKNLDT*ERSNRM
Trigger: CATCCGATTGCTACGTTCCAAAGTGTCCAGGTTTTT...TGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGTCAGCAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp CAGCCAGCCCGTGATCTATCCAAGACATCCGCCCACAGCAGTGAGAAGCTGATGTATGTTGTCACAGAATaGGATGAAGTTTTACACTGG +
Preference number: 5 (lower is better)
Translates to: QPARDLSKTSAHSSEKLMYVVTE*DEVLHW
Trigger: CCAGTGTAAAACTTCATCCAATTCTGTGACAACATA...CATCAGCTTCTCACTGCTGTGGGCGGATGTCTTGGATAGATCACGGGCTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450649.6
CDS CCA 90 bp TCCTTGATCCAGTTCTTCACTGAGCTTCCAGGACACCATGCTCTTTaGTTTTCCTCCTACCTTACCGGTTACTTCTCTGAGGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SLIQFFTELPGHHAL*FSSYLTGYFSEASL
Trigger: CAAAGAAGCCTCAGAGAAGTAACCGGTAAGGTAGGAGGAAAACCAAAGAGCATGGTGTCCTGGAAGCTCAGTGAAGAACTGGATCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532532.1
CDS-3UTR CAA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGCCTGCAACTGACACATaGGTTTTCTGCATGACCCTG +
Preference number: 5 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRPATDT*VFCMTL
Trigger: CAGGGTCATGCAGAAAACCAATGTGTCAGTTGCAGG...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TCACCTAGGCTGACCAAAGTCCAGCTCAGCCAGCCCGTGATCTATCCAAGACATTTTGGAAGGTTCCATTaGGACATAAAATGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: SPRLTKVQLSQPVIYPRHFGRFH*DIKCSV
Trigger: AACGCTGCATTTTATGTCCAAATGGAACCTTCCAAA...ATGTCTTGGATAGATCACGGGCTGGCTGAGCTGGACTTTGGTCAGCCTAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TCCGCCCACAGCAGTGAGAAGCTGATGCCACTCAAAGCCATTCTCAGTCTACATTTGTCCTTCCTCATTTaGGAAGGTTCCATTTGGACA +
Preference number: 5 (lower is better)
Translates to: SAHSSEKLMPLKAILSLHLSFLI*EGSIWT
Trigger: TGTCCAAATGGAACCTTCCAAAATGAGGAAGGACAA...ATGTAGACTGAGAATGGCTTTGAGTGGCATCAGCTTCTCACTGCTGTGGGCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp GGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCTATGTTGTCACAGAATaGGATGAAGAGGTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: GTCESAMSFPLILPAFLSYVVTE*DEEVFR
Trigger: GCGGAAAACCTCTTCATCCAATTCTGTGACAACATA...GCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CAA 90 bp GGCACTTGTGAGTCAGCAATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCGGCAGGTTTCATATGTaGTCACAGAATTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: GTCESAMSFPLILPAFLSGRFHM*SQNWMK
Trigger: CTTCATCCAATTCTGTGACAACATATGAAACCTGCC...GCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATTGCTGACTCACAAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CAA 90 bp ACATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTAAGCAGAACATTTGTATaGAGTGGCACGTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TCRRKTALSHQPYSRTFVSRTFV*SGTWAE
Trigger: CTCAGCCCACGTGCCACTCAATACAAATGTTCTGCT...TACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS CCA 90 bp CCTGGTCTTGGGCATGGTTCACAAGTCATTTGTCCTTCCTCATTTTaGAAGGTTCCATTTGGACATAAAATGCAGCGTTCTCGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: PGLGHGSQVICPSSF*KVPFGHKMQRSRAP
Trigger: TGGAGCACGAGAACGCTGCATTTTATGTCCAAATGGAACCTTCCAAAATGAGGAAGGACAAATGACTTGTGAACCATGCCCAAGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS CCA 90 bp CTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTaGGCTGAGTCATTTGTAAGGTCTCAAAAACCTGGACACTTTGGA +
Preference number: 5 (lower is better)
Translates to: LSHQPYSRTFVLSGT*AESFVRSQKPGHFG
Trigger: TCCAAAGTGTCCAGGTTTTTGAGACCTTACAAATGACTCAGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000518447.1
ENST00000520467.5
ENST00000524317.1
ENST00000649792.2
CDS CCA 90 bp AGTGCCTGCTGTTTACACACAGGGCTACACAGCACAGTGCAAAGATaGAAACCAAGAAGTCAAGTGTCAACTGCTTCCAAAGTATGGGAA +
Preference number: 5 (lower is better)
Translates to: SACCLHTGLHSTVQR*KPRSQVSTASKVWE
Trigger: TTCCCATACTTTGGAAGCAGTTGACACTTGACTTCTTGGTTTCCATCTTTGCACTGTGCTGTGTAGCCCTGTGTGTAAACAGCAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS-3UTR CAA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCCCATCTGTGTGCATCTaGTACTGTGGATGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: FNNTENSSSRNDREALLAPSVCI*YCGWQL
Trigger: CAGCTGCCATCCACAGTACAAGATGCACACAGATGG...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CAA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTAGGGTGTACCCTCGGTaGCAAGCACAAGCAAATGTG +
Preference number: 5 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVRVYPR*QAQANV
Trigger: CACATTTGCTTGTGCTTGCAACCGAGGGTACACCCT...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TTCAATAACACTGAAAATTCAAGTTCAAGAAATGATCGTGAGGCCCTGCTGGCCTTGATGCTGCACTCATaGGTGTCTCCACAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: FNNTENSSSRNDREALLALMLHS*VSPQWV
Trigger: CACCCACTGTGGAGACACCAATGAGTGCAGCATCAA...GGCCAGCAGGGCCTCACGATCATTTCTTGAACTTGAATTTTCAGTGTTATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CAA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTTTTGGAAGGTTCCATTaGGACATAAAATGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAFGRFH*DIKCSV
Trigger: AACGCTGCATTTTATGTCCAAATGGAACCTTCCAAA...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCATTGTCCTTCCTCATTTaGGAAGGTTCCATTTGGACA +
Preference number: 5 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPLSFLI*EGSIWT
Trigger: TGTCCAAATGGAACCTTCCAAAATGAGGAAGGACAA...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp GCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTGGGCTTGGTTCACAAGTCATTaGTCCTTCCTCATTTTGGAA +
Preference number: 5 (lower is better)
Translates to: ALSHQPYSRTFVLSGTWAWFTSH*SFLILE
Trigger: TTCCAAAATGAGGAAGGACAAATGACTTGTGAACCA...AGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGTATGTTGTCACAGAATaGGATGAAGAGGTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: NSNESLIREAAIPDCADMYVVTE*DEEVFR
Trigger: GCGGAAAACCTCTTCATCCAATTCTGTGACAACATA...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp AACTCTAATGAGTCACTGATACGGGAGGCAGCAATACCCGACTGTGCTGACATGGGCAGGTTTCATATGTaGTCACAGAATTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: NSNESLIREAAIPDCADMGRFHM*SQNWMK
Trigger: CTTCATCCAATTCTGTGACAACATATGAAACCTGCC...CATGTCAGCACAGTCGGGTATTGCTGCCTCCCGTATCAGTGACTCATTAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGGCAGGTTTCATATGTaGTCACAGAATTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPGRFHM*SQNWMK
Trigger: CTTCATCCAATTCTGTGACAACATATGAAACCTGCC...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTTCCACTACAGACTCCTaGAGGAGGAGTAAGACCCCA +
Preference number: 5 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVSTTDS*RRSKTP
Trigger: TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CCTCCTATTGTCAGTGTCCCCAAATGCCTGTTAAAATTTGGCACTTGTGAGTCATCTTTTCCCCTCATCTaGCCTGCCTTTCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: PPIVSVPKCLLKFGTCESSFPLI*PAFLSM
Trigger: CATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGA...TGACTCACAAGTGCCAAATTTTAACAGGCATTTGGGGACACTGACAATAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS-3UTR CAA 90 bp TGTGGGAGGCATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTCCTTGTCTTGGGTGTTaGTTTGACATTATTTCAGGC +
Preference number: 5 (lower is better)
Translates to: CGRHLGPPQEILKLLVLGPCLGC*FDIISG
Trigger: GCCTGAAATAATGTCAAACAAACACCCAAGACAAGG...ACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CAA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTTGACACAGACCACATaGGTTTTCTGCATGACCCTG +
Preference number: 5 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYLTQTT*VFCMTL
Trigger: CAGGGTCATGCAGAAAACCAATGTGGTCTGTGTCAA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520467.5
CDS-3UTR CAA 90 bp TCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCAGAAGGACAGGTGAGTCTCGAAGTGGTGGCTTGTTaGATTGGATTCCTTTTTATT +
Preference number: 5 (lower is better)
Translates to: STTDSLRRSKTPEGQVSLEVVAC*IGFLFI
Trigger: AATAAAAAGGAATCCAATCAAACAAGCCACCACTTC...GAGACTCACCTGTCCTTCTGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS TCA 90 bp GATAATTGCCTGGAATATTCAAACAGTCATGGACACAGCCTCCATTaGGCTCATTTCCACATTCATCGATGTCCTCACACTGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: DNCLEYSNSHGHSLH*AHFHIHRCPHTACL
Trigger: AAGGCAGGCAGTGTGAGGACATCGATGAATGTGGAAATGAGCTCAATGGAGGCTGTGTCCATGACTGTTTGAATATTCCAGGCAATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS TCA 90 bp TTCTTGCAGCCGCAGTCAAAACTGCCCACGATGTTTTTGCAGAAATaGTCACAACCTCCATTGCGGGTCTGGCACTCATCAATATCTTTA +
Preference number: 5 (lower is better)
Translates to: FLQPQSKLPTMFLQK*SQPPLRVWHSSISL
Trigger: TAAAGATATTGATGAGTGCCAGACCCGCAATGGAGGTTGTGATCATTTCTGCAAAAACATCGTGGGCAGTTTTGACTGCGGCTGCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000519788.6
ENST00000520467.5
ENST00000531429.1
ENST00000649792.2
CDS GCA 90 bp CCAGAACTGACCTGCTGTCATCTAATTGTCATCACCACCATTTGCTaGCTAAGATCAGGCAGCATGCTAGGCAATTTATGGACTTTGTCT +
Preference number: 5 (lower is better)
Translates to: PELTCCHLIVITTIC*LRSGSMLGNLWTLS
Trigger: AGACAAAGTCCATAAATTGCCTAGCATGCTGCCTGATCTTAGGCAGCAAATGGTGGTGATGACAATTAGATGACAGCAGGTCAGTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS CCA 90 bp AAATTGCTAATTCATCTGAAGCCCTTATTGACTTCTGTGAACTCGTaGGTTTCCCCAGAGCCTCACCAACTATACCATGCAAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KLLIHLKPLLTSVNS*VSPEPHQLYHAKEA
Trigger: GGCTTCCTTTGCATGGTATAGTTGGTGAGGCTCTGGGGAAACCCACGAGTTCACAGAAGTCAATAAGGGCTTCAGATGAATTAGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530265.1
CDS-3UTR CAA 90 bp AGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGAATTTAAATCCTTTCTaGCAGCCGCAGTCAAAACTG +
Preference number: 5 (lower is better)
Translates to: SSLFCGLLSTTDSLRRSKNLNPF*QPQSKL
Trigger: CAGTTTTGACTGCGGCTGCAAGAAAGGATTTAAATT...CTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGAGGAGTAAGACCCCATTTGGAAGGTTCCATTaGGACATAAAATGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: LFCGLLSTTDSLRRSKTPFGRFH*DIKCSV
Trigger: AACGCTGCATTTTATGTCCAAATGGAACCTTCCAAA...TGGGGTCTTACTCCTCCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGTACACTGGGTTATGTTaGTGGAGCCATCAAAGTCAG +
Preference number: 5 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRYTGLC*WSHQSQ
Trigger: CTGACTTTGATGGCTCCACAAACATAACCCAGTGTA...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATTACACTGGGTTATGTTaGTGGAGCCATCAAAGTCAG +
Preference number: 5 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYYTGLC*WSHQSQ
Trigger: CTGACTTTGATGGCTCCACAAACATAACCCAGTGTA...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATAGCTGTCACCTCCTTTaGGTTAGTTTCAAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYSCHLL*VSFKLK
Trigger: TTTGAGCTTGAAACTAACCAAAAGGAGGTGACAGCT...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS-3UTR CAA 90 bp ACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTAATTGCCTGGGTAGTTaGGGGATTCAATGTACCCAG +
Preference number: 5 (lower is better)
Translates to: TQSHSQSTSTMLGKKNQVNCLGS*GIQCTQ
Trigger: CTGGGTACATTGAATCCCCAAACTACCCAGGCAATT...AACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp TTCAGAATAAGCAGCTTATTCTGTGGCCTCCTTTCCACTACAGACTCCTTGAGGTATGTTGTCACAGAATaGGATGAAGAGGTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: FRISSLFCGLLSTTDSLRYVVTE*DEEVFR
Trigger: GCGGAAAACCTCTTCATCCAATTCTGTGACAACATA...CCTCAAGGAGTCTGTAGTGGAAAGGAGGCCACAGAATAAGCTGCTTATTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309263.7
ENST00000649792.2
CDS-3UTR CAA 90 bp CATGCAGAAGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATGGCAGGTTTCATATGTaGTCACAGAATTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: HAEGRQLCPTNPIAEHLYGRFHM*SQNWMK
Trigger: CTTCATCCAATTCTGTGACAACATATGAAACCTGCC...ATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCTTCTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS TCA 90 bp GGCACTCGTCCACATCAAGACAATTATGACCGTCATGAGCCAACATaGAGCCATCAAAACAAGTGCAACGATAATTGCCTGGAATATTCA +
Preference number: 5 (lower is better)
Translates to: GTRPHQDNYDRHEPT*SHQNKCNDNCLEYS
Trigger: TGAATATTCCAGGCAATTATCGTTGCACTTGTTTTGATGGCTTCATGTTGGCTCATGACGGTCATAATTGTCTTGATGTGGACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS TCA 90 bp TCAAACCATACAATAAGTTATGCTCAAAAGCTCTTCAGGCCCAGCTaGGCCATCATAAGTCAAAGGTCCTGGAAACAGAGTAGATTCAGC +
Preference number: 5 (lower is better)
Translates to: SNHTISYAQKLFRPS*AIISQRSWKQSRFS
Trigger: GCTGAATCTACTCTGTTTCCAGGACCTTTGACTTATGATGGCTCAGCTGGGCCTGAAGAGCTTTTGAGCATAACTTATTGTATGGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS-3UTR CAA 90 bp CTGATGCCACTCAAAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAAATTTAAATCCTTTCTaGCAGCCGCAGTCAAAACTG +
Preference number: 5 (lower is better)
Translates to: LMPLKAILSLHPRCWERKNLNPF*QPQSKL
Trigger: CAGTTTTGACTGCGGCTGCAAGAAAGGATTTAAATT...TTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTTTGAGTGGCATCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp CATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTGTTTGTTTGTATGTTGTCACAGAATaGGATGAAGAGGTTTTCCGC +
Preference number: 5 (lower is better)
Translates to: HLGPPQEILKLLVLGVCLYVVTE*DEEVFR
Trigger: GCGGAAAACCTCTTCATCCAATTCTGTGACAACATA...CAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CAA 90 bp GGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTGTTTGTTTGACATTGGCAGGTTTCATATGTaGTCACAGAATTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: GSTPRDTKTPCLGCLFDIGRFHM*SQNWMK
Trigger: CTTCATCCAATTCTGTGACAACATATGAAACCTGCC...AATGTCAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS-3UTR CAA 90 bp GGAAGCTTGCAACGAGGAAGGCTGGCAATAAATGTACATTATTATGTCTCCAGAAATACCGACTCAGGGTaGGTGAAATCGCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: GSLQRGRLAINVHYYVSRNTDSG*VKSPFH
Trigger: ATGAAAAGGCGATTTCACCAACCCTGAGTCGGTATT...TCTGGAGACATAATAATGTACATTTATTGCCAGCCTTCCTCGTTGCAAGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649792.2
CDS-3UTR CAA 90 bp AAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAATTAGAATATTCACCAGGTaGACACAGACCTCCACATTC +
Preference number: 5 (lower is better)
Translates to: KPFSVYIHDAGKEKPSSIRIFTR*TQTSTF
Trigger: GAATGTGGAGGTCTGTGTCAACCTGGTGAATATTCT...AATTGAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS-3UTR CAA 90 bp AAGCCATTCTCAGTCTACATCCACGATGCTGGGAAAGAAAAACCAAGTTCAATTGGCAGGTTTCATATGTaGTCACAGAATTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: KPFSVYIHDAGKEKPSSIGRFHM*SQNWMK
Trigger: CTTCATCCAATTCTGTGACAACATATGAAACCTGCC...AATTGAACTTGGTTTTTCTTTCCCAGCATCGTGGATGTAGACTGAGAATGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS TCA 90 bp GGCAGCATGCTAGGCAATTTATGGACTTTGTCTCATTTAATCTTCTaGAAACCACAGAAAGTTGGTGCAACCGTTACCTTTTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: GSMLGNLWTLSHLIF*KPQKVGATVTFLIE
Trigger: CTCTATTAAAAAGGTAACGGTTGCACCAACTTTCTGTGGTTTTCAGAAGATTAAATGAGACAAAGTCCATAAATTGCCTAGCATGCTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS GCA 90 bp ATGGACTTTGTCTCATTTAATCTTCTGAAAACCACAGAAAGTTGGTaGAACCGTTACCTTTTTAATAGAGAGATTAAATACTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: MDFVSFNLLKTTESW*NRYLFNREIKYLPR
Trigger: CCTGGGCAAGTATTTAATCTCTCTATTAAAAAGGTAACGGTTGCACCAACTTTCTGTGGTTTTCAGAAGATTAAATGAGACAAAGTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS GCA 90 bp AAAGTTGGTGCAACCGTTACCTTTTTAATAGAGAGATTAAATACTTaGCCAGGGTCATATAGCCAGTATGTGGTAAAACAAGGATTTAAA +
Preference number: 5 (lower is better)
Translates to: KVGATVTFLIERLNT*PGSYSQYVVKQGFK
Trigger: TTTAAATCCTTGTTTTACCACATACTGGCTATATGACCCTGGGCAAGTATTTAATCTCTCTATTAAAAAGGTAACGGTTGCACCAACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS CCA 72 bp CGCCCCGGGACGGTTGCGGCCCGCGACCCCCATGGATaGCTCAGCGGTTGCGGGCAGAGGCGGCGGAGTGCG +
Preference number: 6 (lower is better)
Translates to: RPGTVAARDPHG*LSGCGQRRRSA
Trigger: CGCACTCCGCCGCCTCTGCCCGCAACCGCTGAGCCATCCATGGGGGTCGCGGGCCGCAACCGTCCCGGGGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS CCA 72 bp AGGCCGCCCCGGGACGGTTGCGGCCCGCGACCCCCATaGATGGCTCAGCGGTTGCGGGCAGAGGCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: RPPRDGCGPRPP*MAQRLRAEAAE
Trigger: CTCCGCCGCCTCTGCCCGCAACCGCTGAGCCATCCATGGGGGTCGCGGGCCGCAACCGTCCCGGGGCGGCCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS CCA 72 bp GCTCTGTCCGTGGGCTCCAGGCAGACGGCTGCAGTGTaGCCTCTCACCCCCTCTGCAGGCAGGACGCTGCGC +
Preference number: 6 (lower is better)
Translates to: ALSVGSRQTAAV*PLTPSAGRTLR
Trigger: GCGCAGCGTCCTGCCTGCAGAGGGGGTGAGAGGCCACACTGCAGCCGTCTGCCTGGAGCCCACGGACAGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534295.1
CDS TCA 72 bp GCTGGAGGTGAAACTGCTCCCTGTGGACGGCCTTTCTaGGCGTGCGGATGGCTTTACGGAGCCGCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: AGGETAPCGRPF*ACGWLYGAASR
Trigger: CCGAGAAGCGGCTCCGTAAAGCCATCCGCACGCTCAGAAAGGCCGTCCACAGGGAGCAGTTTCACCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp CCAGCTCAAAACCAGGCCTGCACTCACAGGCGACGCTaGCCCTTGGGGCCTCCTTGCAGATGTGACTACAGC +
Preference number: 6 (lower is better)
Translates to: PAQNQACTHRRR*PLGPPCRCDYS
Trigger: GCTGTAGTCACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCCTGTGAGTGCAGGCCTGGTTTTGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp AGGAAGCACCCGTCTCCTCCACCACTCTTACCGCAGTaGAGGGACACACGGGGTGACACACTTGTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: RKHPSPPPLLPQ*RDTRGDTLVGR
Trigger: CCTGCCCACAAGTGTGTCACCCCGTGTGTCCCTGCACTGCGGTAAGAGTGGTGGAGGAGACGGGTGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS CCA 72 bp CCTCGGCCTTCTCCGAGAGAACTAAAGCTCTGTCCGTaGGCTCCAGGCAGACGGCTGCAGTGTGGCCTCTCA +
Preference number: 6 (lower is better)
Translates to: PRPSPRELKLCP*APGRRLQCGLS
Trigger: TGAGAGGCCACACTGCAGCCGTCTGCCTGGAGCCCACGGACAGAGCTTTAGTTCTCTCGGAGAAGGCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534295.1
CDS TCA 72 bp TCCACCACTCTTACCGCAGTGCAGGGACACACGGGGTaGCACACTTGTGGGCAGGAGCCCCTTCACTTCCAC +
Preference number: 6 (lower is better)
Translates to: STTLTAVQGHTG*HTCGQEPLHFH
Trigger: GTGGAAGTGAAGGGGCTCCTGCCCACAAGTGTGTCACCCCGTGTGTCCCTGCACTGCGGTAAGAGTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS TCA 72 bp TCCACCACTCTTACCGCAGTGCAGGGACACACGGGGTaGCACACTTGTGGGCAGGAGCCCCTTCACCACACA +
Preference number: 6 (lower is better)
Translates to: STTLTAVQGHTG*HTCGQEPLHHT
Trigger: TGTGTGGTGAAGGGGCTCCTGCCCACAAGTGTGTCACCCCGTGTGTCCCTGCACTGCGGTAAGAGTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519788.6
CDS CCA 72 bp AGCAGCAGCCCAGGCTGTACCGTTCACTGTAGGAGCTaGGTGAGGGCCTCCCATTCCAGAACTGACCTGCTG +
Preference number: 6 (lower is better)
Translates to: SSSPGCTVHCRS*VRASHSRTDLL
Trigger: CAGCAGGTCAGTTCTGGAATGGGAGGCCCTCACCCAGCTCCTACAGTGAACGGTACAGCCTGGGCTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS TCA 72 bp GCAGCCCAGGCTGTACCGTTCACTGTAGGAGCTGGGTaGGGGCCTCCCATTCCAGAACTGACCTGCTGTCAT +
Preference number: 6 (lower is better)
Translates to: AAQAVPFTVGAG*GPPIPELTCCH
Trigger: ATGACAGCAGGTCAGTTCTGGAATGGGAGGCCCTCACCCAGCTCCTACAGTGAACGGTACAGCCTGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS GCA 72 bp CTGCACTCTGGGCCATCGGCTGTATCGTCACAGGAGTaGTGGCACCCACCGTTCCCATGGTTACAGGTCAAG +
Preference number: 6 (lower is better)
Translates to: LHSGPSAVSSQE*WHPPFPWLQVK
Trigger: CTTGACCTGTAACCATGGGAACGGTGGGTGCCAGCACTCCTGTGACGATACAGCCGATGGCCCAGAGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp GGAAGCAGGAAGTTCGACCAGCTTCAGGCTGGAACGTaGCCAGGGCACAGAGCTGGCAAGGTGCAAAGCCAT +
Preference number: 6 (lower is better)
Translates to: GSRKFDQLQAGT*PGHRAGKVQSH
Trigger: ATGGCTTTGCACCTTGCCAGCTCTGTGCCCTGGGCACGTTCCAGCCTGAAGCTGGTCGAACTTCCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000519535.1
ENST00000520467.5
ENST00000649792.2
CDS CAA 72 bp CTTAGGGGTGCTTGGTCGGCCAGGGGCTCCTGGGACTaGCTTGCCAGAGCTGCATGTAAGGTTTACGTAGCG +
Preference number: 6 (lower is better)
Translates to: LRGAWSARGSWD*LARAACKVYVA
Trigger: CGCTACGTAAACCTTACATGCAGCTCTGGCAAGCAAGTCCCAGGAGCCCCTGGCCGACCAAGCACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS CAA 90 bp ACAGGTCCCCACCTGGCCAGGCTCGGTCAGTCTCCAAGCCATCAGTaGCAACTCAGTATGAGGCCTTGTCTGGGGCCAACACTGCATGAT +
Preference number: 6 (lower is better)
Translates to: TGPHLARLGQSPSHQ*QLSMRPCLGPTLHD
Trigger: ATCATGCAGTGTTGGCCCCAGACAAGGCCTCATACTGAGTTGCAACTGATGGCTTGGAGACTGACCGAGCCTGGCCAGGTGGGGACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS TCA 72 bp TTAGCCACGTCGAGGTTCATGCCTGAGAGCTGGAGGTaGAACTGCTCCCTGTGGACGGCCTTTCTGAGCGTG +
Preference number: 6 (lower is better)
Translates to: LATSRFMPESWR*NCSLWTAFLSV
Trigger: CACGCTCAGAAAGGCCGTCCACAGGGAGCAGTTTCACCTCCAGCTCTCAGGCATGAACCTCGACGTGGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS TCA 72 bp TCTGGGAGGCTTTTTAGCCACGTCGAGGTTCATGCCTaGGAGCTGGAGGTGAAACTGCTCCCTGTGGACGGC +
Preference number: 6 (lower is better)
Translates to: SGRLFSHVEVHA*ELEVKLLPVDG
Trigger: GCCGTCCACAGGGAGCAGTTTCACCTCCAGCTCTCAGGCATGAACCTCGACGTGGCTAAAAAGCCTCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp TGCACTCACAGGCGACGCTGCCCCTTGGGGCCTCCTTaGAGATGTGACTACAGCCGTGATCCTTATTCATGC +
Preference number: 6 (lower is better)
Translates to: CTHRRRCPLGPP*RCDYSRDPYSC
Trigger: GCATGAATAAGGATCACGGCTGTAGTCACATCTGCAAGGAGGCCCCAAGGGGCAGCGTCGCCTGTGAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp GTGTCCTCTCGCTCAAGGCAGCTCCTCCCATCTGTGTaGATCTTGTACTGTGGATGGCAGCTGCACTCTGGG +
Preference number: 6 (lower is better)
Translates to: VSSRSRQLLPSV*ILYCGWQLHSG
Trigger: CCCAGAGTGCAGCTGCCATCCACAGTACAAGATGCACACAGATGGGAGGAGCTGCCTTGAGCGAGAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp GGCCCTCTCCTCATCTCTTCAGAAGCATTTACCACCTaGCAGGCCCAGGGGATGGAGACAGGCAAGAGATCC +
Preference number: 6 (lower is better)
Translates to: GPLLISSEAFTT*QAQGMETGKRS
Trigger: GGATCTCTTGCCTGTCTCCATCCCCTGGGCCTGGCAGGTGGTAAATGCTTCTGAAGAGATGAGGAGAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534295.1
CDS CCA 72 bp CACTCTGGGCCATCGGCTGTATCGTCACAGGAGTGCTaGCACCCACCGTTCCCATGGTTACAGGTCAAGATG +
Preference number: 6 (lower is better)
Translates to: HSGPSAVSSQEC*HPPFPWLQVKM
Trigger: CATCTTGACCTGTAACCATGGGAACGGTGGGTGCCAGCACTCCTGTGACGATACAGCCGATGGCCCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS CAA 72 bp CACCTGGCCAGGCTCGGTCAGTCTCCAAGCCATCAGTaGCAACTCAGTATGAGGCCTTGTCTGGGGCCAACA +
Preference number: 6 (lower is better)
Translates to: HLARLGQSPSHQ*QLSMRPCLGPT
Trigger: TGTTGGCCCCAGACAAGGCCTCATACTGAGTTGCAACTGATGGCTTGGAGACTGACCGAGCCTGGCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS TCA 72 bp GCAGTCCTGAAGAGAGGTGAATGCCAGAGTGACATCTaGGGAAGCACCCGTCTCCTCCACCACTCTTACCGC +
Preference number: 6 (lower is better)
Translates to: AVLKRGECQSDI*GSTRLLHHSYR
Trigger: GCGGTAAGAGTGGTGGAGGAGACGGGTGCTTCCTCAGATGTCACTCTGGCATTCACCTCTCTTCAGGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp GAGGTGGAACTGGGACAGAGATCCAGGCAGTCTGGCTaGAGAGAGCCCCTCATTACACTGCCCATAAGCTGT +
Preference number: 6 (lower is better)
Translates to: EVELGQRSRQSG*REPLITLPISC
Trigger: ACAGCTTATGGGCAGTGTAATGAGGGGCTCTCTGCAGCCAGACTGCCTGGATCTCTGTCCCAGTTCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS CCA 72 bp TGTGTGCATCTTGTACTGTGGATGGCAGCTGCACTCTaGGCCATCGGCTGTATCGTCACAGGAGTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: CVHLVLWMAAAL*AIGCIVTGVLA
Trigger: TGCCAGCACTCCTGTGACGATACAGCCGATGGCCCAGAGTGCAGCTGCCATCCACAGTACAAGATGCACACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS CCA 72 bp AGAGACAGGGTCTCACCGAGCCTGGTCACAAAATCCTaGTTCAGCCTCCTCCCTCAGCCTGGGATTACAGGT +
Preference number: 6 (lower is better)
Translates to: RDRVSPSLVTKS*FSLLPQPGITG
Trigger: ACCTGTAATCCCAGGCTGAGGGAGGAGGCTGAACCAGGATTTTGTGACCAGGCTCGGTGAGACCCTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS CAA 72 bp CCAACACTGCATGATCCTCACTGGCTCTCTGGGTCCTaGTGGAAGAGGGTCCAAAACGCCCCAGTGAGCACA +
Preference number: 6 (lower is better)
Translates to: PTLHDPHWLSGS*WKRVQNAPVST
Trigger: TGTGCTCACTGGGGCGTTTTGGACCCTCTTCCACAAGGACCCAGAGAGCCAGTGAGGATCATGCAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS CAA 90 bp TTGGTGTCTCCACAGTGGGTGAAGCCATACAGGGTGTACCCTCGGTaGCAAGCACAAGCAAATGTGCCAGGGTGGTTGATGCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LVSPQWVKPYRVYPR*QAQANVPGWLMQLW
Trigger: CCACAGCTGCATCAACCACCCTGGCACATTTGCTTGTGCTTGCAACCGAGGGTACACCCTGTATGGCTTCACCCACTGTGGAGACACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000519788.6
ENST00000520467.5
ENST00000649792.2
CDS CAA 90 bp AAACATTTCCTTAGGGGTGCTTGGTCGGCCAGGGGCTCCTGGGACTaGCTTGCCAGAGCTGCATGTAAGGTTTACGTAGCGGAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: KHFLRGAWSARGSWD*LARAACKVYVAEAL
Trigger: GAGAGCTTCCGCTACGTAAACCTTACATGCAGCTCTGGCAAGCAAGTCCCAGGAGCCCCTGGCCGACCAAGCACCCCTAAGGAAATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp CCTTGCAGATGTGACTACAGCCGTGATCCTTATTCATaGAGCTCAGGCCCTCTTCCGAGCGGTGAATGCAGG +
Preference number: 6 (lower is better)
Translates to: PCRCDYSRDPYS*SSGPLPSGECR
Trigger: CCTGCATTCACCGCTCGGAAGAGGGCCTGAGCTGCATGAATAAGGATCACGGCTGTAGTCACATCTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp TCCCATCTGTGTGCATCTTGTACTGTGGATGGCAGCTaGACTCTGGGCCATCGGCTGTATCGTCACAGGAGT +
Preference number: 6 (lower is better)
Translates to: SHLCASCTVDGS*TLGHRLYRHRS
Trigger: ACTCCTGTGACGATACAGCCGATGGCCCAGAGTGCAGCTGCCATCCACAGTACAAGATGCACACAGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp GCCCAGGGCACAGAGCTGGCAAGGTGCAAAGCCATCTaGAGAATATTCACCAGGTTGACACAGACCTCCACA +
Preference number: 6 (lower is better)
Translates to: AQGTELARCKAI*RIFTRLTQTST
Trigger: TGTGGAGGTCTGTGTCAACCTGGTGAATATTCTGCAGATGGCTTTGCACCTTGCCAGCTCTGTGCCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS CCA 72 bp GCCGTTTCACCCGTTTATCCCCATCCACCACTGATGTaGTGTTGCTCTCTGTCACCTCCAGGACAGTGTCCT +
Preference number: 6 (lower is better)
Translates to: AVSPVYPHPPLM*CCSLSPPGQCP
Trigger: AGGACACTGTCCTGGAGGTGACAGAGAGCAACACCACATCAGTGGTGGATGGGGATAAACGGGTGAAACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000531429.1
ENST00000649792.2
CDS CAA 72 bp ACATTCATCGATGTCCTCACACTGCCTGCCTTCCCCTaGGTAGCCAGGCTTGCAGGAGCACTTGTAGGAGGT +
Preference number: 6 (lower is better)
Translates to: TFIDVLTLPAFP*VARLAGALVGG
Trigger: ACCTCCTACAAGTGCTCCTGCAAGCCTGGCTACCAAGGGGAAGGCAGGCAGTGTGAGGACATCGATGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000534295.1
ENST00000649792.2
CDS CAA 72 bp CCATGGTTACAGGTCAAGATGCAGTCTCTCTGGTTCTaGGCCAGCTCAAAACCAGGCCTGCACTCACAGGCG +
Preference number: 6 (lower is better)
Translates to: PWLQVKMQSLWF*ASSKPGLHSQA
Trigger: CGCCTGTGAGTGCAGGCCTGGTTTTGAGCTGGCCAAGAACCAGAGAGACTGCATCTTGACCTGTAACCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS CAA 72 bp CCACAGTGGGTGAAGCCATACAGGGTGTACCCTCGGTaGCAAGCACAAGCAAATGTGCCAGGGTGGTTGATG +
Preference number: 6 (lower is better)
Translates to: PQWVKPYRVYPR*QAQANVPGWLM
Trigger: CATCAACCACCCTGGCACATTTGCTTGTGCTTGCAACCGAGGGTACACCCTGTATGGCTTCACCCACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000519788.6
ENST00000520467.5
ENST00000531429.1
ENST00000649792.2
CDS CAA 90 bp CTCATTTCCACATTCATCGATGTCCTCACACTGCCTGCCTTCCCCTaGGTAGCCAGGCTTGCAGGAGCACTTGTAGGAGGTGGGTGTGTT +
Preference number: 6 (lower is better)
Translates to: LISTFIDVLTLPAFP*VARLAGALVGGGCV
Trigger: AACACACCCACCTCCTACAAGTGCTCCTGCAAGCCTGGCTACCAAGGGGAAGGCAGGCAGTGTGAGGACATCGATGAATGTGGAAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000534295.1
ENST00000649792.2
CDS CAA 90 bp TCTGAGCATGTGTGCTTGTCAGCAGTTTGCCAGCTGGCTCCGAAGTaGGCTCTGTTCAAAGCAGAGACGCTCTTTCCATGTGCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: SEHVCLSAVCQLAPK*ALFKAETLFPCAAG
Trigger: GCCTGCAGCACATGGAAAGAGCGTCTCTGCTTTGAACAGAGCCAACTTCGGAGCCAGCTGGCAAACTGCTGACAAGCACACATGCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS CAA 90 bp TTCACTTCTCCACAGTGGGTGAAGCCATACAGGGTGTACCCTCGGTaGCAAGCACAAGCAAATGTGCCAGGGTGGTTGATGCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: FTSPQWVKPYRVYPR*QAQANVPGWLMQLW
Trigger: CCACAGCTGCATCAACCACCCTGGCACATTTGCTTGTGCTTGCAACCGAGGGTACACCCTGTATGGCTTCACCCACTGTGGAGAAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531429.1
CDS TCA 72 bp ATGAGACCAACTTCAGTCCAACCTGTTACCCAGTGCTaGCCGCAGTTCCCACCTCAGTCAGAGAGCACACAG +
Preference number: 6 (lower is better)
Translates to: MRPTSVQPVTQC*PQFPPQSESTQ
Trigger: CTGTGTGCTCTCTGACTGAGGTGGGAACTGCGGTCAGCACTGGGTAACAGGTTGGACTGAAGTTGGTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS TCA 72 bp TCGGTCAGTCTCCAAGCCATCAGTTGCAACTCAGTATaGGGCCTTGTCTGGGGCCAACACTGCATGATCCTC +
Preference number: 6 (lower is better)
Translates to: SVSLQAISCNSV*GLVWGQHCMIL
Trigger: GAGGATCATGCAGTGTTGGCCCCAGACAAGGCCTCATACTGAGTTGCAACTGATGGCTTGGAGACTGACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS GCA 72 bp CGCAGTTCCCACCTCAGTCAGAGAGCACACAGTCAATaGTGTGGTGCTTCTGACCCTGAGTCAATGGCACAT +
Preference number: 6 (lower is better)
Translates to: RSSHLSQRAHSQ*CGASDPESMAH
Trigger: ATGTGCCATTGACTCAGGGTCAGAAGCACCACAGCATTGACTGTGTGCTCTCTGACTGAGGTGGGAACTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS GCA 72 bp GCCCAGGGCACAGAGCTGGCAAGGTGCAAAGCCATCTaGAGAATATTCACCAGGTTGACACAGACCACATTG +
Preference number: 6 (lower is better)
Translates to: AQGTELARCKAI*RIFTRLTQTTL
Trigger: CAATGTGGTCTGTGTCAACCTGGTGAATATTCTGCAGATGGCTTTGCACCTTGCCAGCTCTGTGCCCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520467.5
CDS CCA 72 bp GTATCGTCACAGGAGTGCTGGCACCCACCGTTCCCATaGTTACAGGTCAAGATGCAGTCTCTCTGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: VSSQECWHPPFP*LQVKMQSLWFL
Trigger: CAAGAACCAGAGAGACTGCATCTTGACCTGTAACCATGGGAACGGTGGGTGCCAGCACTCCTGTGACGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS CCA 72 bp TGTGCCCGAGATCATAGAACTAGTAAGAGGTGGAACTaGGACAGAGATCCAGGCAGTCTGGCTGCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: CARDHRTSKRWN*DRDPGSLAAES
Trigger: GCTCTCTGCAGCCAGACTGCCTGGATCTCTGTCCCAGTTCCACCTCTTACTAGTTCTATGATCTCGGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS GCA 72 bp TATTCATGCAGCTCAGGCCCTCTTCCGAGCGGTGAATaGAGGTGTGCTGATTGTCACTCAGGAAAAACCCCT +
Preference number: 6 (lower is better)
Translates to: YSCSSGPLPSGE*RCADCHSGKTP
Trigger: AGGGGTTTTTCCTGAGTGACAATCAGCACACCTGCATTCACCGCTCGGAAGAGGGCCTGAGCTGCATGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS GCA 72 bp GTGCTTCTGACCCTGAGTCAATGGCACATGAGTGCCTaGTGTTTACACACAGGGCTACACAGCACAGTGCAA +
Preference number: 6 (lower is better)
Translates to: VLLTLSQWHMSA*CLHTGLHSTVQ
Trigger: TTGCACTGTGCTGTGTAGCCCTGTGTGTAAACAGCAGGCACTCATGTGCCATTGACTCAGGGTCAGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS GCA 72 bp ATATTCACCAGGTTGACACAGACCACATTGGTTTTCTaGATGACCCTGGCCCACTCCACAGGACTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: IFTRLTQTTLVF*MTLAHSTGLCL
Trigger: CAGGCAGAGTCCTGTGGAGTGGGCCAGGGTCATGCAGAAAACCAATGTGGTCTGTGTCAACCTGGTGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520467.5
CDS CCA 72 bp TGTGCTTGTCAGCAGTTTGCCAGCTGGCTCCGAAGTTaGCTCTGTTCAAAGCAGAGACGCTCTTTCCATGTG +
Preference number: 6 (lower is better)
Translates to: CACQQFASWLRS*LCSKQRRSFHV
Trigger: CACATGGAAAGAGCGTCTCTGCTTTGAACAGAGCCAACTTCGGAGCCAGCTGGCAAACTGCTGACAAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS CAA 72 bp GTGTGCTTGTCAGCAGTTTGCCAGCTGGCTCCGAAGTaGGCTCTGTTCAAAGCAGAGACGCTCTTTCCATGT +
Preference number: 6 (lower is better)
Translates to: VCLSAVCQLAPK*ALFKAETLFPC
Trigger: ACATGGAAAGAGCGTCTCTGCTTTGAACAGAGCCAACTTCGGAGCCAGCTGGCAAACTGCTGACAAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS GCA 72 bp TCTTGCAGCCGCAGTCAAAACTGCCCACGATGTTTTTaGAGAAATGATCACAACCTCCATTGCGGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: SCSRSQNCPRCF*RNDHNLHCGSG
Trigger: GCCAGACCCGCAATGGAGGTTGTGATCATTTCTGCAAAAACATCGTGGGCAGTTTTGACTGCGGCTGCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000519788.6
ENST00000520467.5
ENST00000531429.1
ENST00000649792.2
CDS GCA 72 bp TGGCTTTACGGAGCCGCTTCTCGGTTCGCTTTACGATaGAGCTCAGGTCACAAGAAGCCACACAGTCTTTTT +
Preference number: 6 (lower is better)
Translates to: WLYGAASRFALR*SSGHKKPHSLF
Trigger: AAAAAGACTGTGTGGCTTCTTGTGACCTGAGCTGCATCGTAAAGCGAACCGAGAAGCGGCTCCGTAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450649.6
CDS GCA 72 bp GGCTCTGTTCAAAGCAGAGACGCTCTTTCCATGTGCTaGAGGCTGTGCTTACCATCATATGTCACGTATGGG +
Preference number: 6 (lower is better)
Translates to: GSVQSRDALSMC*RLCLPSYVTYG
Trigger: CCCATACGTGACATATGATGGTAAGCACAGCCTGCAGCACATGGAAAGAGCGTCTCTGCTTTGAACAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS CCA 72 bp ACACAGACCTCCACATTCAGACATATTCCAAGCTTCTaGGGTCTTCAGGGCCCCAGAATTTCCTGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: TQTSTFRHIPSF*GLQGPRISWSW
Trigger: CCAAGACCAGGAAATTCTGGGGCCCTGAAGACCCCAGAAGCTTGGAATATGTCTGAATGTGGAGGTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS CCA 72 bp GTCAAGTGTCAACTGCTTCCAAAGTATGGGAAGGCCTaGGTAGTTCTCAGGCTTAGGCCTACACACTGCCTA +
Preference number: 6 (lower is better)
Translates to: VKCQLLPKYGKA*VVLRLRPTHCL
Trigger: TAGGCAGTGTGTAGGCCTAAGCCTGAGAACTACCCAGGCCTTCCCATACTTTGGAAGCAGTTGACACTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS CCA 72 bp ACAGTCAATGCTGTGGTGCTTCTGACCCTGAGTCAATaGCACATGAGTGCCTGCTGTTTACACACAGGGCTA +
Preference number: 6 (lower is better)
Translates to: TVNAVVLLTLSQ*HMSACCLHTGL
Trigger: TAGCCCTGTGTGTAAACAGCAGGCACTCATGTGCCATTGACTCAGGGTCAGAAGCACCACAGCATTGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS CCA 72 bp AGAATGTGTGCCCGAGATCATAGAACTAGTAAGAGGTaGAACTGGGACAGAGATCCAGGCAGTCTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: RMCARDHRTSKR*NWDRDPGSLAA
Trigger: TGCAGCCAGACTGCCTGGATCTCTGTCCCAGTTCCACCTCTTACTAGTTCTATGATCTCGGGCACACATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS CAA 90 bp AATGTCTTTTCCCCTCATCTTGCCTGCCTTTCTGAGCATGTGTGCTaGTCAGCAGTTTGCCAGCTGGCTCCGAAGTTGGCTCTGTTCAAA +
Preference number: 6 (lower is better)
Translates to: NVFSPHLACLSEHVC*SAVCQLAPKLALFK
Trigger: TTTGAACAGAGCCAACTTCGGAGCCAGCTGGCAAACTGCTGACAAGCACACATGCTCAGAAAGGCAGGCAAGATGAGGGGAAAAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS GCA 72 bp GTTGGCTCTGTTCAAAGCAGAGACGCTCTTTCCATGTaGTGCAGGCTGTGCTTACCATCATATGTCACGTAT +
Preference number: 6 (lower is better)
Translates to: VGSVQSRDALSM*CRLCLPSYVTY
Trigger: ATACGTGACATATGATGGTAAGCACAGCCTGCAGCACATGGAAAGAGCGTCTCTGCTTTGAACAGAGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519202.1
CDS CCA 72 bp AATGAGTTCCTGGTAGTCCTCATCATATGTCACGTATaGGACCTGGAACCCTCTAGCGCTGTTCCCTTCATT +
Preference number: 6 (lower is better)
Translates to: NEFLVVLIICHV*DLEPSSAVPFI
Trigger: AATGAAGGGAACAGCGCTAGAGGGTTCCAGGTCCCATACGTGACATATGATGAGGACTACCAGGAACTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000524317.1
ENST00000649792.2
CDS CCA 72 bp CAGTTCTTCACTGAGCTTCCAGGACACCATGCTCTTTaGTTTTCCTCCTACCTTACCGGTTACTTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: QFFTELPGHHAL*FSSYLTGYFSE
Trigger: CTCAGAGAAGTAACCGGTAAGGTAGGAGGAAAACCAAAGAGCATGGTGTCCTGGAAGCTCAGTGAAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532532.1
CDS CAA 90 bp GGTCGCAGACCCTCGGGAAACAGCTCAGCATTTTTCAAACTACACTaGCCTTCATTTAGCTTAAAGGTTACACTTGTCCTGATGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GRRPSGNSSAFFKLH*PSFSLKVTLVLMVV
Trigger: CACCACCATCAGGACAAGTGTAACCTTTAAGCTAAATGAAGGCAAGTGTAGTTTGAAAAATGCTGAGCTGTTTCCCGAGGGTCTGCGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS CAA 90 bp AGGAAGACAGCTCTGTCCCACCAACCCTATAGCAGAACATTTGTATaGAGTGGCACGTGGGCTGAGTCATTTGTAAGGTCTCAAAAACCT +
Preference number: 6 (lower is better)
Translates to: RKTALSHQPYSRTFV*SGTWAESFVRSQKP
Trigger: AGGTTTTTGAGACCTTACAAATGACTCAGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTGGTGGGACAGAGCTGTCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000518447.1
ENST00000520467.5
ENST00000524317.1
ENST00000649792.2
CDS CCA 72 bp CTTTTCTTCTTCTCTCTGACCATCATATGTCACGTATaGGACCTGGAACCCTCTAGCGCTGTTCCCTTCATT +
Preference number: 6 (lower is better)
Translates to: LFFFSLTIICHV*DLEPSSAVPFI
Trigger: AATGAAGGGAACAGCGCTAGAGGGTTCCAGGTCCCATACGTGACATATGATGGTCAGAGAGAAGAAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532532.1
CDS CCA 72 bp ATTCATCTGAAGCCCTTATTGACTTCTGTGAACTCGTaGGTTTCCCCAGAGCCTCACCAACTATACCATGCA +
Preference number: 6 (lower is better)
Translates to: IHLKPLLTSVNS*VSPEPHQLYHA
Trigger: TGCATGGTATAGTTGGTGAGGCTCTGGGGAAACCCACGAGTTCACAGAAGTCAATAAGGGCTTCAGATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530265.1
CDS GCA 72 bp ACCTGCTGTCATCTAATTGTCATCACCACCATTTGCTaGCTAAGATCAGGCAGCATGCTAGGCAATTTATGG +
Preference number: 6 (lower is better)
Translates to: TCCHLIVITTIC*LRSGSMLGNLW
Trigger: CCATAAATTGCCTAGCATGCTGCCTGATCTTAGGCAGCAAATGGTGGTGATGACAATTAGATGACAGCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS GCA 72 bp CTGACCTGCTGTCATCTAATTGTCATCACCACCATTTaGTGCCTAAGATCAGGCAGCATGCTAGGCAATTTA +
Preference number: 6 (lower is better)
Translates to: LTCCHLIVITTI*CLRSGSMLGNL
Trigger: TAAATTGCCTAGCATGCTGCCTGATCTTAGGCAGCAAATGGTGGTGATGACAATTAGATGACAGCAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS CAA 90 bp GGGAGGCATTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTaGGGTGTTTGTTTGACATTATTTCAGGCATCATCATATGTCACG +
Preference number: 6 (lower is better)
Translates to: GRHLGPPQEILKLLV*GVCLTLFQASSYVT
Trigger: CGTGACATATGATGATGCCTGAAATAATGTCAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAATGCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS TCA 72 bp CTGGAATATTCAAACAGTCATGGACACAGCCTCCATTaGGCTCATTTCCACATTCATCGATGTCCTCACACT +
Preference number: 6 (lower is better)
Translates to: LEYSNSHGHSLH*AHFHIHRCPHT
Trigger: AGTGTGAGGACATCGATGAATGTGGAAATGAGCTCAATGGAGGCTGTGTCCATGACTGTTTGAATATTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS TCA 72 bp ACAATAAGTTATGCTCAAAAGCTCTTCAGGCCCAGCTaGGCCATCATAAGTCAAAGGTCCTGGAAACAGAGT +
Preference number: 6 (lower is better)
Translates to: TISYAQKLFRPS*AIISQRSWKQS
Trigger: ACTCTGTTTCCAGGACCTTTGACTTATGATGGCTCAGCTGGGCCTGAAGAGCTTTTGAGCATAACTTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524317.1
CDS CCA 72 bp CAACCCTATAGCAGAACATTTGTATTGAGTGGCACGTaGGCTGAGTCATTTGTAAGGTCTCAAAAACCTGGA +
Preference number: 6 (lower is better)
Translates to: QPYSRTFVLSGT*AESFVRSQKPG
Trigger: TCCAGGTTTTTGAGACCTTACAAATGACTCAGCCCACGTGCCACTCAATACAAATGTTCTGCTATAGGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000518447.1
ENST00000520467.5
ENST00000524317.1
ENST00000649792.2
CDS CCA 72 bp TGTTTACACACAGGGCTACACAGCACAGTGCAAAGATaGAAACCAAGAAGTCAAGTGTCAACTGCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: CLHTGLHSTVQR*KPRSQVSTASK
Trigger: TTTGGAAGCAGTTGACACTTGACTTCTTGGTTTCCATCTTTGCACTGTGCTGTGTAGCCCTGTGTGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519535.1
CDS CCA 72 bp TTTGACATTATTTCAGGCATCATCATATGTCACGTATaGGACCTGGAACCCTCTAGCGCTGTTCCCTTCATT +
Preference number: 6 (lower is better)
Translates to: FDIISGIIICHV*DLEPSSAVPFI
Trigger: AATGAAGGGAACAGCGCTAGAGGGTTCCAGGTCCCATACGTGACATATGATGATGCCTGAAATAATGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS TCA 72 bp CCACATCAAGACAATTATGACCGTCATGAGCCAACATaGAGCCATCAAAACAAGTGCAACGATAATTGCCTG +
Preference number: 6 (lower is better)
Translates to: PHQDNYDRHEPT*SHQNKCNDNCL
Trigger: CAGGCAATTATCGTTGCACTTGTTTTGATGGCTTCATGTTGGCTCATGACGGTCATAATTGTCTTGATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000520467.5
ENST00000649792.2
CDS CCA 72 bp ATGCAGCTCAGGTCACAAGAAGCTGTCACCTCCTTTTaGTTAGTTTCAAGCTCAAACTCAACAGTGATAAAC +
Preference number: 6 (lower is better)
Translates to: MQLRSQEAVTSF*LVSSSNSTVIN
Trigger: GTTTATCACTGTTGAGTTTGAGCTTGAAACTAACCAAAAGGAGGTGACAGCTTCTTGTGACCTGAGCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000520467.5
ENST00000649792.2
CDS CAA 90 bp ATGGTTCACAAGTCATTTGTCCTTCCTCATTTTGGAAGGTTCCATTaGGACATAAAATGCAGCGTTCTCGTGCTCCATCATAATAGGTCC +
Preference number: 6 (lower is better)
Translates to: MVHKSFVLPHFGRFH*DIKCSVLVLHHNRS
Trigger: GGACCTATTATGATGGAGCACGAGAACGCTGCATTTTATGTCCAAATGGAACCTTCCAAAATGAGGAAGGACAAATGACTTGTGAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000649792.2
CDS CAA 90 bp TTTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTTGGGTGTTaGTTTGACATTATTTCAGGCATCATCATATGTCACGTATGGGAC +
Preference number: 6 (lower is better)
Translates to: FGSTPRDTKTPCLGC*FDIISGIIICHVWD
Trigger: GTCCCATACGTGACATATGATGATGCCTGAAATAATGTCAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS CAA 72 bp TTGGGTCCACCCCAAGAGATACTAAAACTCCTTGTCTaGGGTGTTTGTTTGACATTATTTCAGGCATCATCA +
Preference number: 6 (lower is better)
Translates to: LGPPQEILKLLV*GVCLTLFQASS
Trigger: TGATGATGCCTGAAATAATGTCAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTGGGGTGGACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528651.1
CDS CAA 72 bp AAACTAGACCCAGCAGGAAGGCTGGATATTAGATCTTaGTTCATCAAAGTTATCCTTTCTGAGCCAAACCTT +
Preference number: 6 (lower is better)
Translates to: KLDPAGRLDIRS*FIKVILSEPNL
Trigger: AAGGTTTGGCTCAGAAAGGATAACTTTGATGAACAAAGATCTAATATCCAGCCTTCCTGCTGGGTCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530265.1
CDS GCA 72 bp TTTCTTATCCTTAAGTATTTCCTGATGGTTCTCAGATaGATAGAGCCTGCCATCTCGAACTATGTCTTCAAT +
Preference number: 6 (lower is better)
Translates to: FLILKYFLMVLR*IEPAISNYVFN
Trigger: ATTGAAGACATAGTTCGAGATGGCAGGCTCTATGCATCTGAGAACCATCAGGAAATACTTAAGGATAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309263.7
ENST00000450649.6
ENST00000518447.1
ENST00000520467.5
ENST00000524317.1
ENST00000649792.2
CDS CAA 90 bp TTCAATGAGTTCCTGGTAGTCCTCTGTTGGAATAAAGAACATGTTTaGCATTCTTATGATTTAGTTGCTTCCAAACTCACTCTTTCACTT +
Preference number: 6 (lower is better)
Translates to: FNEFLVVLCWNKEHV*HSYDLVASKLTLSL
Trigger: AAGTGAAAGAGTGAGTTTGGAAGCAACTAAATCATAAGAATGCAAAACATGTTCTTTATTCCAACAGAGGACTACCAGGAACTCATTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518447.1
CDS CAA 72 bp CAAGAGATACTAAAACTCCTTGTCTTGGGTGTTTGTTaGACATTATTTCAGGCATCATCATATGTCACGTAT +
Preference number: 6 (lower is better)
Translates to: QEILKLLVLGVC*TLFQASSYVTY
Trigger: ATACGTGACATATGATGATGCCTGAAATAATGTCAAACAAACACCCAAGACAAGGAGTTTTAGTATCTCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528651.1