Pregenerated sensors for SCTR (Homo sapiens)
Ensembl gene IDs: ENSG00000080293Ensembl transcript IDs: ENST00000019103.8, ENST00000485440.1, ENST00000494326.5, ENST00000627145.1, ENST00000630739.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTaGACTTCTCTTCCCAGAAGAGCAAACGAACCAAATCCCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: LIPGTIYFPVPFWDP*TSLPRRANEPNPRP Trigger: GGGCCTGGGATTTGGTTCGTTTGCTCTTCTGGGAAGAGAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTGCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCCTTGGTCTCTGTCCGTaGGTGACCCTGCTCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VSAGKTGCPTAVPSLRRTLGLCP*VTLLQP Trigger: AGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAG...GGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGCAGACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| 3UTR GCA 72 bp | GGGTGTCTGCTGGGAAGACTGGCTGTCCCACAGCAGTaGCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GCLLGRLAVPQQ*PAFAGPLLVSV Trigger: GACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGCAGACACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | GTGTCTGCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCCCTGCCCGTGCCCTCTaGCCGCTCGGGAGCTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VSAGKTGCPTAVPSLRRTPARAL*PLGSSA Trigger: CGCTGAGCTCCCGAGCGGGCAGAGGGCACGGGCAGG...GGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGCAGACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | ACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCGGCGGGCCCCGGGACTaGTCCTCCTCGGACCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TAVPSLRRTSLGLCPWVTGGPRD*SSSDQV Trigger: CACCTGGTCCGAGGAGGAGCAGTCCCGGGGCCCGCC...GGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGACGTCCGCCTGCCCGTaGCCTCTGCCCGCTCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSHSSAQPSQDLSWSLSVTSACP*PLPARE Trigger: CTCCCGAGCGGGCAGAGGGCACGGGCAGGCGGACGT...CACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGTCCAAGGCCTGGGGAGGGGCATCTTCAGCTGAAGGAGGACACAGGGTGCCTCCTCGGACCAGGTaGCCGCGCGCGCTAAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: EESKAWGGASSAEGGHRVPPRTR*PRALSR Trigger: GCGGCTTAGCGCGCGCGGCCACCTGGTCCGAGGAGG...CACCCTGTGTCCTCCTTCAGCTGAAGATGCCCCTCCCCAGGCCTTGGACTCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | AGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGCCTCGCCCCGAGGAGCCATaGCTGAGCCACCCGACCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLRRTSLGLCPWVTLLQPRPEEP*LSHPTC Trigger: GCAGGTCGGGTGGCTCAGCCATGGCTCCTCGGGGCG...AGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | CACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACAGCGGCGGCGACAGGTaGGGACGCATGGTGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: HSSAQPSQDLSWSLSVGDSGGDR*GRMVPA Trigger: TGCGGGCACCATGCGTCCCCACCTGTCGCCGCCGCT...GTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCAGCCGCCCGCCCCATTaGTCAGGACGCGGCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: TAVPSLRRTSLGLCPWVTSRPPH*SGRGFA Trigger: GGCAAAGCCGCGTCCTGATCAATGGGGCGGGCGGCT...GGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | GCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCTGGGGCGACCAGGAGCATaGCCAGGGAGGAGCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: ALVLPHSASHPFGRVQGLGRPGA*PGRSCS Trigger: GCTACAGCTCCTCCCTGGTCATGCTCCTGGTCGCCC...CAGGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | AGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTATCAGGACGCGGCTTTaGCGGCGCGCCTCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: RLAVPQQCPAFAGPLLVSIRTRL*RRASST Trigger: GGTGGAGGAGGCGCGCCGGCAAAGCCGCGTCCTGAT...AGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | AGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTGGCAGTAGTAGCTGCTaGAGCGGCGGCGACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SAQPSQDLSWSLSVGDPAGSSSC*SGGDRW Trigger: CCACCTGTCGCCGCCGCTGCAGCAGCTACTACTGCC...AGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | GCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTACCGGCAGTAGTAGCTaGTGCAGCGGCGGCGACAGG | + |
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Preference number: 4 (lower is better) Translates to: AGKTGCPTAVPSLRRTSLTGSSS*CSGGDR Trigger: CCTGTCGCCGCCGCTGCAGCAGCTACTACTGCCGGT...AAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | AGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTACAGGTGGGGACGCATaGTGCCCGCACGTTCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: SAQPSQDLSWSLSVGDPATGGDA*CPHVPR Trigger: TCGGGGAACGTGCGGGCACCATGCGTCCCCACCTGT...AGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGCATCCCCTCACAACCTaGCACTGGCTGCTCCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PSLRRTSLGLCPWVTLLQHPLTT*HWLLRA Trigger: GGCACGGAGCAGCCAGTGCCAGGTTGTGAGGGGATG...CTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | CTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGACTGGAACAGCACCATaGCCAGCTTGCAGCCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSHSSAQPSQDLSWSLSVTGTAP*PACSPP Trigger: GGGCGGGCTGCAAGCTGGTCATGGTGCTGTTCCAGT...CACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | AGGCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCCCTTGGTGCTGTTGCTaGAGGAGGCCACGGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RPLSCPTVPHIPSEESKAPWCCC*RRPRGA Trigger: TGCACCCCGTGGCCTCCTTCAGCAACAGCACCAAGG...GGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | GTGTCTGCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCCTCCAGCCTCTCAGATaGTGCTGGTCCTGCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VSAGKTGCPTAVPSLRRTLQPLR*CWSCRC Trigger: GCACCTGCAGGACCAGCATCATCTGAGAGGCTGGAG...GGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGCAGACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | AGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGCCTCAACCTGGCACTGGCTaGTCCGTGCCCAGGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLRRTSLGLCPWVTLLQPQPGTG*SVPRSP Trigger: AGGAGACCTGGGCACGGAGCAGCCAGTGCCAGGTTG...AGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | AGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTGCTGTCCCACAGCAGTaGCCAGCCTTCGCAGGACCT | + |
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Preference number: 4 (lower is better) Translates to: SAQPSQDLSWSLSVGDPAAVPQQ*PAFAGP Trigger: AGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGC...AGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | TGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGCCCAGGCCCTTGTCCTaGCCCACAGTGCCTCACATC | + |
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Preference number: 4 (lower is better) Translates to: WEDWLSHSSAQPSQDLSWPRPLS*PTVPHI Trigger: GATGTGAGGCACTGTGGGGCAGGACAAGGGCCTGGG...CCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGTCCAAGGCCTGGGGAGGGGCATCTTCAGCTGAAGGAGGACACAGGGTGGCACTGGCTGCTCCGTaGCCAGGTCTCCTGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EESKAWGGASSAEGGHRVALAAP*PGLLSA Trigger: AGCAGACAGGAGACCTGGGCACGGAGCAGCCAGTGC...CACCCTGTGTCCTCCTTCAGCTGAAGATGCCCCTCCCCAGGCCTTGGACTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGGCCACCACCAGTCCCTaGAATGAGCCAAGGGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: PSLRRTSLGLCPWVTLLQATTSP*NEPRAS Trigger: ACTAGCCCTTGGCTCATTCCAGGGACTGGTGGTGGC...CTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | CACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCTTGGTCTCTGTCCGTaGGTGACCCTGCTCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: HSSAQPSQDLSWSLSVGDLGLCP*VTLLQP Trigger: AGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAG...GTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | AGGCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCGTCTGCTGGGAAGACTaGCTGTCCCACAGCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RPLSCPTVPHIPSEESKAVCWED*LSHSSA Trigger: GGCACTGCTGTGGGACAGCCAGTCTTCCCAGCAGAC...GGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | AGGCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCCCTGGGGAAGGTTTCTaGCCAGCCATCCTGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RPLSCPTVPHIPSEESKAPGEGF*PAILCA Trigger: TGCACACAGGATGGCTGGTCAGAAACCTTCCCCAGG...GGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCTGCTGCCACTTCTTCTaGACCTCCAGCTGCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: TAVPSLRRTSLGLCPWVTCCHFF*TSSCTS Trigger: GGAGGTGCAGCTGGAGGTTCAGAAGAAGTGGCAGCA...GGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | AGGCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCAGGGGCATCTTCAGCTaGAGGAGGACACAGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: RPLSCPTVPHIPSEESKARGIFS*RRTQGV Trigger: GACACCCTGTGTCCTCCTTCAGCTGAAGATGCCCCT...GGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | CACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACGGAAAGCACAGAGGATaGCAAGGGCGACCAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: HSSAQPSQDLSWSLSVGDGKHRG*QGRPGA Trigger: TGCTCCTGGTCGCCCTTGGCATCCTCTGTGCTTTCC...GTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | ATCCCTTCGGAAGAGTCCAAGGCCTGGGGAGGGGCATCTTCAGCTGAAGGAGGAAAGGAGGCCACGGGGTaGAGTGGGAACTCACGGAGG | + |
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Preference number: 4 (lower is better) Translates to: IPSEESKAWGGASSAEGGKEATG*SGNSRR Trigger: CCTCCGTGAGTTCCCACTGCACCCCGTGGCCTCCTT...TCCTCCTTCAGCTGAAGATGCCCCTCCCCAGGCCTTGGACTCTTCCGAAGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | AGGCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCAGGACACAGGGTGTCTaGTGGGAAGACTGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RPLSCPTVPHIPSEESKARTQGV*WEDWLS Trigger: GGACAGCCAGTCTTCCCAGCAGACACCCTGTGTCCT...GGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | GCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTTCGCAGGACCTCTCTTaGTCTCTGTCCGTGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: AGKTGCPTAVPSLRRTSLSQDLS*SLSVGD Trigger: GTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGA...AAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | GCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCTGACACAGGGTGTCTGCTaGGAAGACTGGCTGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ALVLPHSASHPFGRVQGLTQGVC*EDWLSH Trigger: GTGGGACAGCCAGTCTTCCCAGCAGACACCCTGTGT...CAGGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | ATCTCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCCGAGGAGCCATGGCTaGGCCACCCGACCTGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: ISSQAPFISLSLSGTPELPRSHG*ATRPAA Trigger: CGCCGCAGGTCGGGTGGCTCAGCCATGGCTCCTCGG...AAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | AGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGCCTACAGGGCACGAAGGATaGAGGACACGAACAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SLRRTSLGLCPWVTLLQPTGHEG*RTRTGA Trigger: TGCACCTGTTCGTGTCCTTCATCCTTCGTGCCCTGT...AGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | GCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGTAGGTGACATCATCTaGGGAGAAGAGCACGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: AGKTGCPTAVPSLRRTSLVGDII*GEEHGV Trigger: GACGCCGTGCTCTTCTCCTCAGATGATGTCACCTAC...AAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | TCTCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCGGTGGGGACGCATGGTaGCCGCACGTTCCCCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SHPRHHLFPCPFLGPLNFGGDAW*PHVPRG Trigger: CCCTCGGGGAACGTGCGGGCACCATGCGTCCCCACC...GAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | TCTCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCAGGGCTCCAGTCGAGTaGGCGGCGCAGGCGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SHPRHHLFPCPFLGPLNFRAPVE*AAQASS Trigger: GCTGCTCGCCTGCGCCGCGCACTCGACTGGAGCCCT...GAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | GTGTCTGCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTGCAGGCACTGGTCTTaGTCTTCCCACAGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: VSAGKTGCPTAVPSLRRTCRHWS*SSHSTC Trigger: ACAAGTGCTGTGGGAAGAGCAAGACCAGTGCCTGCA...GGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGCAGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | AGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTCCCAGGTCTCCTGTCTaGTCTCTGGAGAGTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RLAVPQQCPAFAGPLLVSPRSPV*SLESSC Trigger: GCAGGAACTCTCCAGAGAGCAGACAGGAGACCTGGG...AGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | AGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGCCTGGATGTAGTTGCGAGTaGAGTGGAGCCTCCGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SLRRTSLGLCPWVTLLQPGCSCE*SGASGK Trigger: CTTTCCGGAGGCTCCACTGCACTCGCAACTACATCC...AGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | GCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTAGTTCCTGCAGGCACTaGTCTTGCTCTTCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: AVPQQCPAFAGPLLVSVRSSCRH*SCSSHS Trigger: GCTGTGGGAAGAGCAAGACCAGTGCCTGCAGGAACT...ACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGCTCCTGTCTGCTCTCTaGAGAGTTCCTGCAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: WEDWLSHSSAQPSQDLSWLLSAL*RVPAGT Trigger: AGTGCCTGCAGGAACTCTCCAGAGAGCAGACAGGAG...CCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | CACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCTCCATAGCGTCCTCTaGGGAGAAGGCGAAGACGAT | + |
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Preference number: 4 (lower is better) Translates to: HSSAQPSQDLSWSLSVGDLHSVL*GEGEDD Trigger: ATCGTCTTCGCCTTCTCCCCAGAGGACGCTATGGAG...GTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | GCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTAACCATTTCTGCTGGTaGGCATCCGGAGGAATCTCG | + |
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Preference number: 4 (lower is better) Translates to: AGKTGCPTAVPSLRRTSLNHFCW*ASGGIS Trigger: CGAGATTCCTCCGGATGCTCACCAGCAGAAATGGTT...AAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | AGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGCCTAGCCCACGGTGTACATaGCTTTCAGCTTCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLRRTSLGLCPWVTLLQPSPRCT*LSASAG Trigger: ACCTGCTGAAGCTGAAAGTCATGTACACCGTGGGCT...AGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | GCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCTGGGGCATCGCAGTAGGTaGCATCATCTGAGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALVLPHSASHPFGRVQGLGHRSR*HHLRRR Trigger: TCTTCTCCTCAGATGATGTCACCTACTGCGATGCCC...CAGGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | AGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGGGAACTCACGGAGGTaGCATTGCTGCCACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLAVPQQCPAFAGPLLVSGNSRR*HCCHFF Trigger: GAAGAAGTGGCAGCAATGGCACCTCCGTGAGTTCCC...AGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | TCCCTTCGGAAGAGTCCAAGGCCTGGGGAGGGGCATCTTCAGCTGAAGGAGGACTGGATGCGTTGGCATTaGTGTCCCAGCACCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRKSPRPGEGHLQLKEDWMRWH*CPSTQH Trigger: ATGTTGGGTGCTGGGACATCAATGCCAACGCATCCA...GTCCTCCTTCAGCTGAAGATGCCCCTCCCCAGGCCTTGGACTCTTCCGAAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | TGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGGAGAACCCCATCCGAATaGCACAAATCCCTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WEDWLSHSSAQPSQDLSWRTPSE*HKSLEV Trigger: TACCTCCAGGGATTTGTGGCATTCGGATGGGGTTCT...CCAAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | GCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCTCTCTTGATCCACCAGATGGATaGGTTGGCATTGATGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGKTGCPTAVPSLRRTSLDPPDG*VGIDVP Trigger: TGGGACATCAATGCCAACGCATCCATCTGGTGGATC...AAGAGAGGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGAGCAACAAAAATGGCTaGAGAACCCCATCCGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLRRTSLGLCPWVTLLQSNKNG*RTPSEC Trigger: GCATTCGGATGGGGTTCTCCAGCCATTTTTGTTGCT...CTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | TCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCTCGGCCACGGGGTGCAGTaGGAACTCACGGAGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSQAPFISLSLSGTPELLGHGVQ*ELTEVP Trigger: TGGCACCTCCGTGAGTTCCCACTGCACCCCGTGGCC...GAGAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | ATCCCTTCGGAAGAGTCCAAGGCCTGGGGAGGGGCATCTTCAGCTGAAGGAGGATCTCTGGAGAGTTCCTaGAGGCACTGGTCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPSEESKAWGGASSAEGGSLESS*RHWSCS Trigger: AGAGCAAGACCAGTGCCTGCAGGAACTCTCCAGAGA...TCCTCCTTCAGCTGAAGATGCCCCTCCCCAGGCCTTGGACTCTTCCGAAGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | GCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCTGGGCGCTTATAATGGCTaGCTTCATTTCCTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALVLPHSASHPFGRVQGLGAYNG*LHFLLF Trigger: AAACAAGAGGAAATGAAGTCAGCCATTATAAGCGCC...CAGGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | TCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCTCTGTCCTGCCCCACAGTaGCTCACATCCCTTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSQAPFISLSLSGTPELLCPAPQ*LTSLRK Trigger: CTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACA...GAGAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | TCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCTCGCAGGAGAGTGGACCTaGCCAGGCGCTTATAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQAPFISLSLSGTPELLAGEWT*PGAYNG Trigger: GCCATTATAAGCGCCTGGCCAGGTCCACTCTCCTGC...GAGAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | CATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCTCTTGGCTCTGCTCCAAGTaGCTGGCCTTGGTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPRHHLFPCPFLGPLNFSWLCSK*LALVLL Trigger: CAACAGCACCAAGGCCAGCCACTTGGAGCAGAGCCA...AGAGAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | TCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCTCGCCATGATGCAGTACTaGAACAGCACCATGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQAPFISLSLSGTPELLAMMQY*NSTMTS Trigger: GCTGGTCATGGTGCTGTTCCAGTACTGCATCATGGC...GAGAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | TCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCTCAGGAGTAGTTGGCCATaGTGCAGTACTGGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSQAPFISLSLSGTPELLRSSWP*CSTGTA Trigger: TGCTGTTCCAGTACTGCATCATGGCCAACTACTCCT...GAGAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR TCA 90 bp | ATCTCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTTCACAGGACCACGAATaGTCCACCAGATGGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISSQAPFISLSLSGTPELSQDHE*STRWMR Trigger: ACGCATCCATCTGGTGGATCATTCGTGGTCCTGTGA...AAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR GCA 90 bp | CATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCTCTACCAGCCATCCTGTGTaGAGTTTCGGAACAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HPRHHLFPCPFLGPLNFSTSHPV*SFGTRN Trigger: GTTCCTTGTTCCGAAACTGCACACAGGATGGCTGGT...AGAGAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CCA 90 bp | ATCTCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTAATGCCACAAATCCCTaGAGGTACTTTCTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISSQAPFISLSLSGTPELNATNP*RYFLSE Trigger: CTCTGAAAGAAAGTACCTCCAGGGATTTGTGGCATT...AAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS TCA 90 bp | CCTCCTCGGACCAGGTGGCCGCGCGCGCTAAGCCGCCCGCCCCATTaGTCAGGACGCGGCTTTGCCGGCGCGCCTCCTCCACCCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPRTRWPRALSRPPH*SGRGFAGAPPPPGR Trigger: CCTGCCGGGTGGAGGAGGCGCGCCGGCAAAGCCGCGTCCTGATCAATGGGGCGGGCGGCTTAGCGCGCGCGGCCACCTGGTCCGAGGAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS GCA 90 bp | GTCGAGTGCGCGGCGCAGGCGAGCAGCACCGGCAGTAGTAGCTGCTaGAGCGGCGGCGACAGGTGGGGACGCATGGTGCCCGCACGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VECAAQASSTGSSSC*SGGDRWGRMVPARS Trigger: GGAACGTGCGGGCACCATGCGTCCCCACCTGTCGCCGCCGCTGCAGCAGCTACTACTGCCGGTGCTGCTCGCCTGCGCCGCGCACTCGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS GCA 90 bp | CCAGTCGAGTGCGCGGCGCAGGCGAGCAGCACCGGCAGTAGTAGCTaGTGCAGCGGCGGCGACAGGTGGGGACGCATGGTGCCCGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: PVECAAQASSTGSSS*CSGGDRWGRMVPAR Trigger: ACGTGCGGGCACCATGCGTCCCCACCTGTCGCCGCCGCTGCAGCAGCTACTACTGCCGGTGCTGCTCGCCTGCGCCGCGCACTCGACTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CAA 90 bp | GTGTCTGCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCGATCAGGACGCGGCTTaGCCGGCGCGCCTCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSAGKTGCPTAVPSLRRTDQDAA*PARLLH Trigger: GTGGAGGAGGCGCGCCGGCAAAGCCGCGTCCTGATC...GGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGCAGACAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS TCA 90 bp | AGGTGCCCTGGCTCTGCTCCAAGTGGCTGGCCTTGGTGCTGTTGCTaGAGGAGGCCACGGGGTGCAGTGGGAACTCACGGAGGTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RCPGSAPSGWPWCCC*RRPRGAVGTHGGAI Trigger: AATGGCACCTCCGTGAGTTCCCACTGCACCCCGTGGCCTCCTTCAGCAACAGCACCAAGGCCAGCCACTTGGAGCAGAGCCAGGGCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000494326.5 |
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| CDS TCA 90 bp | CAGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTaGCCCTGCTCCAGCCTCTCAGATGATGCTGGTCCTGCAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QCPAFAGPLLVSVRG*PCSSLSDDAGPAGA Trigger: GGCACCTGCAGGACCAGCATCATCTGAGAGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000494326.5 |
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| CDS TCA 90 bp | TCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGCCTCTCAGATaGTGCTGGTCCTGCAGGTGCCCTGGCTCTGCTCCAAGTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGLCPWVTLLQPLR*CWSCRCPGSAPSGW Trigger: CCAGCCACTTGGAGCAGAGCCAGGGCACCTGCAGGACCAGCATCATCTGAGAGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000494326.5 |
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| CDS-3UTR CAA 90 bp | ACATCCCTTCGGAAGAGTCCAAGGCCTGGGGAGGGGCATCTTCAGCTGAAGGAGAAGCCGCCCGCCCCATaGATCAGGACGCGGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSLRKSPRPGEGHLQLKEKPPAP*IRTRLC Trigger: GCAAAGCCGCGTCCTGATCAATGGGGCGGGCGGCTT...CTCCTTCAGCTGAAGATGCCCCTCCCCAGGCCTTGGACTCTTCCGAAGGGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS CCA 90 bp | GTGGCTGGCCTTGGTGCTGTTGCTGAAGGAGGCCACGGGGTGCAGTaGGAACTCACGGAGGTGCCATTGCTGCCACTTCTTCTGAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: VAGLGAVAEGGHGVQ*ELTEVPLLPLLLNL Trigger: GAGGTTCAGAAGAAGTGGCAGCAATGGCACCTCCGTGAGTTCCCACTGCACCCCGTGGCCTCCTTCAGCAACAGCACCAAGGCCAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000494326.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTGCTGGGAAGACTGGCTGTCCCACAGCAGTGCCCAGCCTTCGCAGGACCCTCACGGAGGTGCCATaGCTGCCACTTCTTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSAGKTGCPTAVPSLRRTLTEVP*LPLLLN Trigger: GTTCAGAAGAAGTGGCAGCAATGGCACCTCCGTGAG...GGTCCTGCGAAGGCTGGGCACTGCTGTGGGACAGCCAGTCTTCCCAGCAGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CAA 90 bp | AGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGCCTTCCAAGTGGCTGGCCTaGGTGCTGTTGCTGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLRRTSLGLCPWVTLLQPSKWLA*VLLLKE Trigger: CTCCTTCAGCAACAGCACCAAGGCCAGCCACTTGGA...AGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS TCA 90 bp | CAGCTTGCAGCCCGCCCTGTGGGCATCGCAGTAGGTGACATCATCTaGGGAGAAGAGCACGGCGTCCTTGATGAAGTTGGACAGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: QLAARPVGIAVGDII*GEEHGVLDEVGQGT Trigger: CGTGCCCTGTCCAACTTCATCAAGGACGCCGTGCTCTTCTCCTCAGATGATGTCACCTACTGCGATGCCCACAGGGCGGGCTGCAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000627145.1 ENST00000630739.2 |
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| CDS GCA 90 bp | CCAAGAAAAGCAGCATCAGACAAGGATGGGGGATGGACCGAGGGCTaGCCTACCATCCTGTCCACATCACCGACACCCTTGCCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRKAASDKDGGWTEG*PTILSTSPTPLPAW Trigger: CCAGGCAGGCAAGGGTGTCGGTGATGTGGACAGGATGGTAGGGCAGCCCTCGGTCCATCCCCCATCCTTGTCTGATGCTGCTTTTCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CCA 90 bp | CCTGCAACAGACTTCTGGAACCCGTGCCCTCTGAGAGGTCATCGCTaGGGTCAGGCTTGGAAGGGGCTAGAAATGAGCTGGCACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PATDFWNPCPLRGHR*GQAWKGLEMSWHWL Trigger: CAGCCAGTGCCAGCTCATTTCTAGCCCCTTCCAAGCCTGACCCCAGCGATGACCTCTCAGAGGGCACGGGTTCCAGAAGTCTGTTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS CCA 90 bp | TCCAAGGGCAGCCACACAGGGAAACTGCTTCCTGCAACAGACTTCTaGAACCCGTGCCCTCTGAGAGGTCATCGCTGGGGTCAGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKGSHTGKLLPATDF*NPCPLRGHRWGQAW Trigger: CCAAGCCTGACCCCAGCGATGACCTCTCAGAGGGCACGGGTTCCAGAAGTCTGTTGCAGGAAGCAGTTTCCCTGTGTGGCTGCCCTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS-3UTR CAA 90 bp | AGTGCCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTGGCCAGCAGCTTATGTaGTCCCACATCCCCTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SAQPSQDLSWSLSVGDPAGQQLM*SHIPSQ Trigger: TTGTGAGGGGATGTGGGACAACATAAGCTGCTGGCC...AGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CAA 90 bp | AGGCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCAAGAGCACGGCGTCCTaGATGAAGTTGGACAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPLSCPTVPHIPSEESKAKSTAS*MKLDRA Trigger: TGCCCTGTCCAACTTCATCAAGGACGCCGTGCTCTT...GGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CAA 90 bp | AGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGCCTCACCAGATGGATGCGTaGGCATTGATGTCCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLRRTSLGLCPWVTLLQPHQMDA*ALMSQH Trigger: GTGCTGGGACATCAATGCCAACGCATCCATCTGGTG...AGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS GCA 90 bp | AGCCACACAGGGAAACTGCTTCCTGCAACAGACTTCTGGAACCCGTaGCCTCTGAGAGGTCATCGCTGGGGTCAGGCTTGGAAGGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SHTGKLLPATDFWNP*PLRGHRWGQAWKGL Trigger: TAGCCCCTTCCAAGCCTGACCCCAGCGATGACCTCTCAGAGGGCACGGGTTCCAGAAGTCTGTTGCAGGAAGCAGTTTCCCTGTGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS CCA 90 bp | CCTCACAACCTGCCAAGAAAAGCAGCATCAGACAAGGATGGGGGATaGACCGAGGGCTGCCCTACCATCCTGTCCACATCACCGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: PHNLPRKAASDKDGG*TEGCPTILSTSPTP Trigger: GGGTGTCGGTGATGTGGACAGGATGGTAGGGCAGCCCTCGGTCCATCCCCCATCCTTGTCTGATGCTGCTTTTCTTGGCAGGTTGTGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS-3UTR CAA 90 bp | CCCAGCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTGACCCTGCTCCAGGAGTGCCGCTTCTCGTaGGAAGAGTCGTTCACATTA | + |
|
Preference number: 5 (lower is better) Translates to: PSLRRTSLGLCPWVTLLQECRFS*EESFTL Trigger: TAATGTGAACGACTCTTCCAACGAGAAGCGGCACTC...CTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CAA 90 bp | AGGCCCTTGTCCTGCCCCACAGTGCCTCACATCCCTTCGGAAGAGTCCAAGGCCATGGATGCGTTGGCATaGATGTCCCAGCACCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: RPLSCPTVPHIPSEESKAMDALA*MSQHPT Trigger: TGTTGGGTGCTGGGACATCAATGCCAACGCATCCAT...GGCCTTGGACTCTTCCGAAGGGATGTGAGGCACTGTGGGGCAGGACAAGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CAA 90 bp | CATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCTCTAGCACCATGACCAGCTaGCAGCCCGCCCTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HPRHHLFPCPFLGPLNFSSTMTS*QPALWA Trigger: TGCCCACAGGGCGGGCTGCAAGCTGGTCATGGTGCT...AGAGAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS-3UTR CAA 90 bp | TCTCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCCTGGCCTTGGTGCTGTaGCTGAAGGAGGCCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHPRHHLFPCPFLGPLNFLALVL*LKEATG Trigger: CCCCGTGGCCTCCTTCAGCAACAGCACCAAGGCCAG...GAAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS GCA 90 bp | CTCCCAAAGTTGATCCAAGGGCAGCCACACAGGGAAACTGCTTCCTaGAACAGACTTCTGGAACCCGTGCCCTCTGAGAGGTCATCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPKLIQGQPHRETAS*NRLLEPVPSERSSL Trigger: CAGCGATGACCTCTCAGAGGGCACGGGTTCCAGAAGTCTGTTGCAGGAAGCAGTTTCCCTGTGTGGCTGCCCTTGGATCAACTTTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS CCA 90 bp | AGAAATAGACCTAGCCGGCGTGGCACACAGGGATCCTGCATGAATTaGTTTGGGTGGGCCCAGGCATCATGTCCTTTGAAAGCCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: RNRPSRRGTQGSCMN*FGWAQASCPLKALQ Trigger: CTGTAAGGCTTTCAAAGGACATGATGCCTGGGCCCACCCAAACCAATTCATGCAGGATCCCTGTGTGCCACGCCGGCTAGGTCTATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS-3UTR CAA 90 bp | ATCTCATCCCAGGCACCATTTATTTCCCTGTCCCTTTCTGGGACCCCTGAACTTCTGCAGGCACTGGTCTaGCTCTTCCCACAGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISSQAPFISLSLSGTPELLQALV*LFPQHL Trigger: CAAGTGCTGTGGGAAGAGCAAGACCAGTGCCTGCAG...AAGTTCAGGGGTCCCAGAAAGGGACAGGGAAATAAATGGTGCCTGGGATGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS TCA 90 bp | GAGGCCCCTCTGGAAGGAGAACCAGGTCTCAATGCAGTGAGAAGCTaGACTTATTGTGAACGACTAGTATACATAGACACTACATTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EAPLEGEPGLNAVRS*TYCERLVYIDTTFE Trigger: TTCAAATGTAGTGTCTATGTATACTAGTCGTTCACAATAAGTTCAGCTTCTCACTGCATTGAGACCTGGTTCTCCTTCCAGAGGGGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS TCA 90 bp | ACAGCTCCACAAGTGTCACCACTGTATTTGCTGCAAGAATATTATTaGGGATGTTGCTTTCTACATCACTTGAGTTCCCTTGATGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: TAPQVSPLYLLQEYY*GCCFLHHLSSLDEA Trigger: GGCCTCATCAAGGGAACTCAAGTGATGTAGAAAGCAACATCCTCAATAATATTCTTGCAGCAAATACAGTGGTGACACTTGTGGAGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS GCA 72 bp | TGGCTGAGCCACCCGACCTGCGGCGGGCCCCGGGACTaGTCCTCCTCGGACCAGGTGGCCGCGCGCGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: WLSHPTCGGPRD*SSSDQVAARAK Trigger: CTTAGCGCGCGCGGCCACCTGGTCCGAGGAGGAGCAGTCCCGGGGCCCGCCGCAGGTCGGGTGGCTCAGCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS CAA 72 bp | GACCAGGTGGCCGCGCGCGCTAAGCCGCCCGCCCCATaGATCAGGACGCGGCTTTGCCGGCGCGCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: DQVAARAKPPAP*IRTRLCRRASS Trigger: GGAGGAGGCGCGCCGGCAAAGCCGCGTCCTGATCAATGGGGCGGGCGGCTTAGCGCGCGCGGCCACCTGGTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS CAA 90 bp | TCCTCCTCGGACCAGGTGGCCGCGCGCGCTAAGCCGCCCGCCCCATaGATCAGGACGCGGCTTTGCCGGCGCGCCTCCTCCACCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSSDQVAARAKPPAP*IRTRLCRRASSTRQ Trigger: CTGCCGGGTGGAGGAGGCGCGCCGGCAAAGCCGCGTCCTGATCAATGGGGCGGGCGGCTTAGCGCGCGCGGCCACCTGGTCCGAGGAGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS TCA 72 bp | ACCAGGTGGCCGCGCGCGCTAAGCCGCCCGCCCCATTaGTCAGGACGCGGCTTTGCCGGCGCGCCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TRWPRALSRPPH*SGRGFAGAPPP Trigger: TGGAGGAGGCGCGCCGGCAAAGCCGCGTCCTGATCAATGGGGCGGGCGGCTTAGCGCGCGCGGCCACCTGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS GCA 72 bp | GCGGCGCAGGCGAGCAGCACCGGCAGTAGTAGCTGCTaGAGCGGCGGCGACAGGTGGGGACGCATGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: AAQASSTGSSSC*SGGDRWGRMVP Trigger: GGGCACCATGCGTCCCCACCTGTCGCCGCCGCTGCAGCAGCTACTACTGCCGGTGCTGCTCGCCTGCGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS GCA 72 bp | TGCGCGGCGCAGGCGAGCAGCACCGGCAGTAGTAGCTaGTGCAGCGGCGGCGACAGGTGGGGACGCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: CAAQASSTGSSS*CSGGDRWGRMV Trigger: CACCATGCGTCCCCACCTGTCGCCGCCGCTGCAGCAGCTACTACTGCCGGTGCTGCTCGCCTGCGCCGCGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS CCA 72 bp | ACCGGCAGTAGTAGCTGCTGCAGCGGCGGCGACAGGTaGGGACGCATGGTGCCCGCACGTTCCCCGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: TGSSSCCSGGDR*GRMVPARSPRA Trigger: CGCCCTCGGGGAACGTGCGGGCACCATGCGTCCCCACCTGTCGCCGCCGCTGCAGCAGCTACTACTGCCGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000019103.8 |
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| CDS CAA 90 bp | CTGCAGGTGCCCTGGCTCTGCTCCAAGTGGCTGGCCTTGGTGCTGTaGCTGAAGGAGGCCACGGGGTGCAGTGGGAACTCACGGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LQVPWLCSKWLALVL*LKEATGCSGNSRRC Trigger: GCACCTCCGTGAGTTCCCACTGCACCCCGTGGCCTCCTTCAGCAACAGCACCAAGGCCAGCCACTTGGAGCAGAGCCAGGGCACCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000494326.5 |
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| CDS GCA 72 bp | CTGGCCTTGGTGCTGTTGCTGAAGGAGGCCACGGGGTaGAGTGGGAACTCACGGAGGTGCCATTGCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LALVLLLKEATG*SGNSRRCHCCH Trigger: GTGGCAGCAATGGCACCTCCGTGAGTTCCCACTGCACCCCGTGGCCTCCTTCAGCAACAGCACCAAGGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000494326.5 |
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| CDS CAA 90 bp | CTTCTGGAACCCGTGCCCTCTGAGAGGTCATCGCTGGGGTCAGGCTaGGAAGGGGCTAGAAATGAGCTGGCACTGGCTGCTCCGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LLEPVPSERSSLGSG*EGARNELALAAPCP Trigger: TGGGCACGGAGCAGCCAGTGCCAGCTCATTTCTAGCCCCTTCCAAGCCTGACCCCAGCGATGACCTCTCAGAGGGCACGGGTTCCAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS CCA 72 bp | CTGGCTGCTCCGTGCCCAGGTCTCCTGTCTGCTCTCTaGAGAGTTCCTGCAGGCACTGGTCTTGCTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LAAPCPGLLSAL*RVPAGTGLALP Trigger: GGGAAGAGCAAGACCAGTGCCTGCAGGAACTCTCCAGAGAGCAGACAGGAGACCTGGGCACGGAGCAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000627145.1 ENST00000630739.2 |
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| CDS CAA 72 bp | GGCCACGGGGTGCAGTGGGAACTCACGGAGGTGCCATaGCTGCCACTTCTTCTGAACCTCCAGCTGCACCTC | + |
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Preference number: 6 (lower is better) Translates to: GHGVQWELTEVP*LPLLLNLQLHL Trigger: GAGGTGCAGCTGGAGGTTCAGAAGAAGTGGCAGCAATGGCACCTCCGTGAGTTCCCACTGCACCCCGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000494326.5 |
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| CDS TCA 72 bp | GCCTTCGCAGGACCTCTCTTGGTCTCTGTCCGTGGGTaGCCCTGCTCCAGCCTCTCAGATGATGCTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: AFAGPLLVSVRG*PCSSLSDDAGP Trigger: AGGACCAGCATCATCTGAGAGGCTGGAGCAGGGTCACCCACGGACAGAGACCAAGAGAGGTCCTGCGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000494326.5 |
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| CDS TCA 72 bp | TGCTTCCTGCAACAGACTTCTGGAACCCGTGCCCTCTaGGAGGTCATCGCTGGGGTCAGGCTTGGAAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: CFLQQTSGTRAL*EVIAGVRLGRG Trigger: GCCCCTTCCAAGCCTGACCCCAGCGATGACCTCTCAGAGGGCACGGGTTCCAGAAGTCTGTTGCAGGAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS GCA 72 bp | GCAGCATCAGACAAGGATGGGGGATGGACCGAGGGCTaGCCTACCATCCTGTCCACATCACCGACACCCTTG | + |
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Preference number: 6 (lower is better) Translates to: AASDKDGGWTEG*PTILSTSPTPL Trigger: CAAGGGTGTCGGTGATGTGGACAGGATGGTAGGGCAGCCCTCGGTCCATCCCCCATCCTTGTCTGATGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS GCA 72 bp | GGGAAACTGCTTCCTGCAACAGACTTCTGGAACCCGTaGCCTCTGAGAGGTCATCGCTGGGGTCAGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GKLLPATDFWNP*PLRGHRWGQAW Trigger: CCAAGCCTGACCCCAGCGATGACCTCTCAGAGGGCACGGGTTCCAGAAGTCTGTTGCAGGAAGCAGTTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS CCA 72 bp | CTTGGTGCTGTTGCTGAAGGAGGCCACGGGGTGCAGTaGGAACTCACGGAGGTGCCATTGCTGCCACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LGAVAEGGHGVQ*ELTEVPLLPLL Trigger: AAGAAGTGGCAGCAATGGCACCTCCGTGAGTTCCCACTGCACCCCGTGGCCTCCTTCAGCAACAGCACCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000494326.5 |
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| CDS CCA 72 bp | GACTTCTGGAACCCGTGCCCTCTGAGAGGTCATCGCTaGGGTCAGGCTTGGAAGGGGCTAGAAATGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: DFWNPCPLRGHR*GQAWKGLEMSW Trigger: CCAGCTCATTTCTAGCCCCTTCCAAGCCTGACCCCAGCGATGACCTCTCAGAGGGCACGGGTTCCAGAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS CAA 90 bp | ACCTCCACCATCCGGCCCGGCACAGAAGAGGGCCAGCAGCTTATGTaGTCCCACATCCCCTCACAACCTGCCAAGAAAAGCAGCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: TSTIRPGTEEGQQLM*SHIPSQPAKKSSIR Trigger: TCTGATGCTGCTTTTCTTGGCAGGTTGTGAGGGGATGTGGGACAACATAAGCTGCTGGCCCTCTTCTGTGCCGGGCCGGATGGTGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS TCA 72 bp | GCCCGCCCTGTGGGCATCGCAGTAGGTGACATCATCTaGGGAGAAGAGCACGGCGTCCTTGATGAAGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: ARPVGIAVGDII*GEEHGVLDEVG Trigger: TCCAACTTCATCAAGGACGCCGTGCTCTTCTCCTCAGATGATGTCACCTACTGCGATGCCCACAGGGCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000019103.8 ENST00000485440.1 ENST00000627145.1 ENST00000630739.2 |
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| CDS CCA 72 bp | CTGTTTGTCCTGGGACCACACTCAGAGCCACTGCCCTaGCCTATGGACACAGCTCCACAAGTGTCACCACTG | + |
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Preference number: 6 (lower is better) Translates to: LFVLGPHSEPLP*PMDTAPQVSPL Trigger: CAGTGGTGACACTTGTGGAGCTGTGTCCATAGGCCAGGGCAGTGGCTCTGAGTGTGGTCCCAGGACAAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CCA 72 bp | AGCCACACAGGGAAACTGCTTCCTGCAACAGACTTCTaGAACCCGTGCCCTCTGAGAGGTCATCGCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: SHTGKLLPATDF*NPCPLRGHRWG Trigger: ACCCCAGCGATGACCTCTCAGAGGGCACGGGTTCCAGAAGTCTGTTGCAGGAAGCAGTTTCCCTGTGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS CAA 72 bp | ATCCGGCCCGGCACAGAAGAGGGCCAGCAGCTTATGTaGTCCCACATCCCCTCACAACCTGCCAAGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: IRPGTEEGQQLM*SHIPSQPAKKS Trigger: GCTTTTCTTGGCAGGTTGTGAGGGGATGTGGGACAACATAAGCTGCTGGCCCTCTTCTGTGCCGGGCCGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS GCA 72 bp | CCCAAAGTTGATCCAAGGGCAGCCACACAGGGAAACTaGTTCCTGCAACAGACTTCTGGAACCCGTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PKVDPRAATQGN*FLQQTSGTRAL Trigger: GAGGGCACGGGTTCCAGAAGTCTGTTGCAGGAAGCAGTTTCCCTGTGTGGCTGCCCTTGGATCAACTTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630739.2 |
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| CDS CCA 72 bp | TCCTGGGACCACACTCAGAGCCACTGCCCTGGCCTATaGACACAGCTCCACAAGTGTCACCACTGTATTTGC | + |
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Preference number: 6 (lower is better) Translates to: SWDHTQSHCPGL*TQLHKCHHCIC Trigger: GCAAATACAGTGGTGACACTTGTGGAGCTGTGTCCATAGGCCAGGGCAGTGGCTCTGAGTGTGGTCCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CCA 72 bp | CCGGCGTGGCACACAGGGATCCTGCATGAATTGGTTTaGGTGGGCCCAGGCATCATGTCCTTTGAAAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PAWHTGILHELV*VGPGIMSFESL Trigger: AAGGCTTTCAAAGGACATGATGCCTGGGCCCACCCAAACCAATTCATGCAGGATCCCTGTGTGCCACGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CCA 72 bp | CCTAGCCGGCGTGGCACACAGGGATCCTGCATGAATTaGTTTGGGTGGGCCCAGGCATCATGTCCTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: PSRRGTQGSCMN*FGWAQASCPLK Trigger: TTTCAAAGGACATGATGCCTGGGCCCACCCAAACCAATTCATGCAGGATCCCTGTGTGCCACGCCGGCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CCA 72 bp | CTGCCAAGAAAAGCAGCATCAGACAAGGATGGGGGATaGACCGAGGGCTGCCCTACCATCCTGTCCACATCA | + |
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Preference number: 6 (lower is better) Translates to: LPRKAASDKDGG*TEGCPTILSTS Trigger: TGATGTGGACAGGATGGTAGGGCAGCCCTCGGTCCATCCCCCATCCTTGTCTGATGCTGCTTTTCTTGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS GCA 72 bp | AGAAATAGACCTAGCCGGCGTGGCACACAGGGATCCTaGATGAATTGGTTTGGGTGGGCCCAGGCATCATGT | + |
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Preference number: 6 (lower is better) Translates to: RNRPSRRGTQGS*MNWFGWAQASC Trigger: ACATGATGCCTGGGCCCACCCAAACCAATTCATGCAGGATCCCTGTGTGCCACGCCGGCTAGGTCTATTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CCA 72 bp | CGTGGCACACAGGGATCCTGCATGAATTGGTTTGGGTaGGCCCAGGCATCATGTCCTTTGAAAGCCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: RGTQGSCMNWFG*AQASCPLKALQ Trigger: CTGTAAGGCTTTCAAAGGACATGATGCCTGGGCCCACCCAAACCAATTCATGCAGGATCCCTGTGTGCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS GCA 72 bp | GAGGATCACAGGACCACGAATGATCCACCAGATGGATaGGTTGGCATTGATGTCCCAGCACCCAACATCTTC | + |
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Preference number: 6 (lower is better) Translates to: EDHRTTNDPPDG*VGIDVPAPNIF Trigger: GAAGATGTTGGGTGCTGGGACATCAATGCCAACGCATCCATCTGGTGGATCATTCGTGGTCCTGTGATCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000019103.8 ENST00000485440.1 |
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| CDS GCA 72 bp | CCCTACCATCCTGTCCACATCACCGACACCCTTGCCTaGCTGGAATTCCCACTAGACTACTTTCAAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PYHPVHITDTLA*LEFPLDYFQSS Trigger: AGAGCTTTGAAAGTAGTCTAGTGGGAATTCCAGGCAGGCAAGGGTGTCGGTGATGTGGACAGGATGGTAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CAA 72 bp | CCTCAGGATCAGGAACCTATCCTGTCTAATGCACCCTaGGACTCTGCCATGTACACGGTAGTGCTCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: PQDQEPILSNAP*DSAMYTVVLSV Trigger: AACACTGAGCACTACCGTGTACATGGCAGAGTCCAAGGGTGCATTAGACAGGATAGGTTCCTGATCCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CAA 90 bp | GTGCTGACTCCTCAGGATCAGGAACCTATCCTGTCTAATGCACCCTaGGACTCTGCCATGTACACGGTAGTGCTCAGTGTTGAAGATAGA | + |
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Preference number: 6 (lower is better) Translates to: VLTPQDQEPILSNAP*DSAMYTVVLSVEDR Trigger: TCTATCTTCAACACTGAGCACTACCGTGTACATGGCAGAGTCCAAGGGTGCATTAGACAGGATAGGTTCCTGATCCTGAGGAGTCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CAA 90 bp | GGATCCTGCATGAATTGGTTTGGGTGGGCCCAGGCATCATGTCCTTaGAAAGCCTTACAGGTAATTCTAACGTTTGACTGCAGGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GSCMNWFGWAQASCP*KALQVILTFDCRVE Trigger: CTCAACCCTGCAGTCAAACGTTAGAATTACCTGTAAGGCTTTCAAAGGACATGATGCCTGGGCCCACCCAAACCAATTCATGCAGGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS GCA 72 bp | TCTGGAGCAGATGGCACATCTGTTGGCCAATCAGTTTaGATTAAACAACTAAGCAGCAATGGGTCTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SGADGTSVGQSV*IKQLSSNGSPF Trigger: GAAGGGAGACCCATTGCTGCTTAGTTGTTTAATGCAAACTGATTGGCCAACAGATGTGCCATCTGCTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CCA 72 bp | ACAACTAAGCAGCAATGGGTCTCCCTTCTAGCTTCATaGTACGACTACCTGGGGAGCTTTAGAAATAGACCT | + |
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Preference number: 6 (lower is better) Translates to: TTKQQWVSLLAS*YDYLGSFRNRP Trigger: AGGTCTATTTCTAAAGCTCCCCAGGTAGTCGTACCATGAAGCTAGAAGGGAGACCCATTGCTGCTTAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CAA 72 bp | ATGAATTGGTTTGGGTGGGCCCAGGCATCATGTCCTTaGAAAGCCTTACAGGTAATTCTAACGTTTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: MNWFGWAQASCP*KALQVILTFDC Trigger: GCAGTCAAACGTTAGAATTACCTGTAAGGCTTTCAAAGGACATGATGCCTGGGCCCACCCAAACCAATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS TCA 72 bp | CTGGAAGGAGAACCAGGTCTCAATGCAGTGAGAAGCTaGACTTATTGTGAACGACTAGTATACATAGACACT | + |
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Preference number: 6 (lower is better) Translates to: LEGEPGLNAVRS*TYCERLVYIDT Trigger: AGTGTCTATGTATACTAGTCGTTCACAATAAGTTCAGCTTCTCACTGCATTGAGACCTGGTTCTCCTTCCAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS GCA 72 bp | CTATGGACACAGCTCCACAAGTGTCACCACTGTATTTaGTGCAAGAATATTATTGAGGATGTTGCTTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: LWTQLHKCHHCI*CKNIIEDVAFY Trigger: GTAGAAAGCAACATCCTCAATAATATTCTTGCAGCAAATACAGTGGTGACACTTGTGGAGCTGTGTCCATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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| CDS CAA 72 bp | ACAAGTGTCACCACTGTATTTGCTGCAAGAATATTATaGAGGATGTTGCTTTCTACATCACTTGAGTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TSVTTVFAARIL*RMLLSTSLEFP Trigger: AGGGAACTCAAGTGATGTAGAAAGCAACATCCTCAATAATATTCTTGCAGCAAATACAGTGGTGACACTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485440.1 |
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