RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCRT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000261678

Ensembl transcript IDs: ENST00000569446.3, ENST00000645782.2

Found 344 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGCAAAGCGAAGACAGAGGTGTGTAGAGGGCAGCGCCCAGGCCTaGCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGG +
Preference number: 1 (lower is better)
Translates to: PAKRRQRCVEGSAQA*LPAPGIRPPTRMPG
Trigger: CCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGGGCGCTGCCCTCTACACACCTCTGTCTTCGCTTTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp CTGCCGTTCTTCCCTGGCCCACCCAAGCCGGTTGGACCCCTGTCCTaGAAACACACCTCCCAGCAGGTGGCTGCGCTCCTGGCGGACTCA +
Preference number: 1 (lower is better)
Translates to: LPFFPGPPKPVGPLS*KHTSQQVAALLADS
Trigger: TGAGTCCGCCAGGAGCGCAGCCACCTGCTGGGAGGTGTGTTTGCAGGACAGGGGTCCAACCGGCTTGGGTGGGCCAGGGAAGAACGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp AGAGCCCGGGAAGCTGGGCTGGAAGAATTCGGATTTGGCAGAGGATaGGAGGCGAGGGTAGGAGGGCGGCTCCGACTGAGGCCCCAGAAG +
Preference number: 1 (lower is better)
Translates to: RAREAGLEEFGFGRG*EARVGGRLRLRPQK
Trigger: CTTCTGGGGCCTCAGTCGGAGCCGCCCTCCTACCCTCGCCTCGCATCCTCTGCCAAATCCGAATTCTTCCAGCCCAGCTTCCCGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp GGGGAGGAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTaGATCTGCCGTTCTTCCCTGGCCCACCCAAGCCGGTTGGACCCC +
Preference number: 1 (lower is better)
Translates to: GEECRGHVNLGTWSL*ICRSSLAHPSRLDP
Trigger: GGGGTCCAACCGGCTTGGGTGGGCCAGGGAAGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTCCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp GCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTaGAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCAC +
Preference number: 1 (lower is better)
Translates to: ACACGTGGQAPAWEL*RHHTWLCRVFGCGH
Trigger: GTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 90 bp GGTCTCTCTGCATCTGCCGTTCTTCCCTGGCCCACCCAAGCCGGTTaGACCCCTGTCCTGCAAACACACCTCCCAGCAGGTGGCTGCGCT +
Preference number: 1 (lower is better)
Translates to: GLSASAVLPWPTQAG*TPVLQTHLPAGGCA
Trigger: AGCGCAGCCACCTGCTGGGAGGTGTGTTTGCAGGACAGGGGTCCAACCGGCTTGGGTGGGCCAGGGAAGAACGGCAGATGCAGAGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 90 bp TGTTTGGATGTGGGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTaGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCA +
Preference number: 1 (lower is better)
Translates to: CLDVGTAVQSGGSSL*GQPRLLLGVRLATP
Trigger: TGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCCCACATCCAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 90 bp CTGGCTGGACATGGCAGATGTGTGTTGGCCAGAGGATCAGAGAAGTaGCCACCTGTGTGGGGGCCCAGGAGCCCTGGATCTGTCCCCCTC +
Preference number: 1 (lower is better)
Translates to: LAGHGRCVLARGSEK*PPVWGPRSPGSVPL
Trigger: GAGGGGGACAGATCCAGGGCTCCTGGGCCCCCACACAGGTGGCCACTTCTCTGATCCTCTGGCCAACACACATCTGCCATGTCCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 90 bp CTCCAGCCATGGCTCTGCCCCTGGCTGGACATGGCAGATGTGTGTTaGCCAGAGGATCAGAGAAGTGGCCACCTGTGTGGGGGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: LQPWLCPWLDMADVC*PEDQRSGHLCGGPG
Trigger: TCCTGGGCCCCCACACAGGTGGCCACTTCTCTGATCCTCTGGCCAACACACATCTGCCATGTCCAGCCAGGGGCAGAGCCATGGCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 90 bp ACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCACCACACCTaGTTGTGTAGGGTGTTTGGATGTGGGCACTGCTGTGCAGAGCGG +
Preference number: 1 (lower is better)
Translates to: TGGQAPAWELCRHHT*LCRVFGCGHCCAER
Trigger: CCGCTCTGCACAGCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp GAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTaGCGTTCTTCCCTGGCCCACCCAAGCCGGTTGGACCCCTGTCCT +
Preference number: 1 (lower is better)
Translates to: ECRGHVNLGTWSLCI*RSSLAHPSRLDPCP
Trigger: AGGACAGGGGTCCAACCGGCTTGGGTGGGCCAGGGAAGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 90 bp CCAAGCCGGTTGGACCCCTGTCCTGCAAACACACCTCCCAGCAGGTaGCTGCGCTCCTGGCGGACTCAGCAATTGGCCTGGCACATAGTA +
Preference number: 1 (lower is better)
Translates to: PSRLDPCPANTPPSR*LRSWRTQQLAWHIV
Trigger: TACTATGTGCCAGGCCAATTGCTGAGTCCGCCAGGAGCGCAGCCACCTGCTGGGAGGTGTGTTTGCAGGACAGGGGTCCAACCGGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 90 bp TGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCTGTGCAGAGCGGTaGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAG +
Preference number: 1 (lower is better)
Translates to: WLCRVFGCGHCCAER*VILVGAATLAAGGE
Trigger: CTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCCCACATCCAAACACCCTACACAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp TGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTaGTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTT +
Preference number: 1 (lower is better)
Translates to: CRHHTWLCRVFGCGH*CAERWVILVGAATL
Trigger: AAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 90 bp GCTGGCACCTTCTTCTCCAGCCATGGCTCTGCCCCTGGCTGGACATaGCAGATGTGTGTTGGCCAGAGGATCAGAGAAGTGGCCACCTGT +
Preference number: 1 (lower is better)
Translates to: AGTFFSSHGSAPGWT*QMCVGQRIREVATC
Trigger: ACAGGTGGCCACTTCTCTGATCCTCTGGCCAACACACATCTGCCATGTCCAGCCAGGGGCAGAGCCATGGCTGGAGAAGAAGGTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp AGTAACTCTAGAGGCGGCGGCAGCTTCGCATGCAGTGCGCATTATTaGTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGG +
Preference number: 1 (lower is better)
Translates to: SNSRGGGSFACSAHY*SIVGFGLPKREGER
Trigger: CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACTGCATGCGAAGCTGCCGCCGCCTCTAGAGTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR TCA 90 bp TCCCTACCTCACCTCACCCCCGTCTTCAGAGACCCAACTCGGAGATaGGGTTCGGTTCTAGGTCTCGTCGACCCTATTGCTGGGAGAAAG +
Preference number: 1 (lower is better)
Translates to: SLPHLTPVFRDPTRR*GSVLGLVDPIAGRK
Trigger: CTTTCTCCCAGCAATAGGGTCGACGAGACCTAGAACCGAACCTCATCTCCGAGTTGGGTCTCTGAAGACGGGGGTGAGGTGAGGTAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp CCTAAACGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATTGTGCTaGTTAGTTATGGGGGCGGGAGGGGGCCCATGGCTTTCCACGGCG +
Preference number: 1 (lower is better)
Translates to: PKRSFYLNSLSRLLC*LVMGAGGGPWLSTA
Trigger: CGCCGTGGAAAGCCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACGTTTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp CTACCTAAACGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATTGTaGTGCTTAGTTATGGGGGCGGGAGGGGGCCCATGGCTTTCCACG +
Preference number: 1 (lower is better)
Translates to: LPKRSFYLNSLSRLL*CLVMGAGGGPWLST
Trigger: CGTGGAAAGCCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACGTTTAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 90 bp GGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCAGCTTCGCATaGAGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAG +
Preference number: 1 (lower is better)
Translates to: GYLILSNSRGGGSFA*SAHYCSIVGFGLPK
Trigger: CTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACTGCATGCGAAGCTGCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp CACCCCCGCCCATGGAACCATTACAGCCGCCGGGCTCTGCCGTGGGGGTCGGGGCTCCCCCTATTGCTGTaGGGAGGGGCCCGCCCTCCG +
Preference number: 2 (lower is better)
Translates to: HPRPWNHYSRRALPWGSGLPLLL*GGARPP
Trigger: CGGAGGGCGGGCCCCTCCTCACAGCAATAGGGGGAG...CCCCGACCCCCACGGCAGAGCCCGGCGGCTGTAATGGTTCCATGGGCGGGGGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCCCCTCGGGACCCTATTaGTTGAAGGGGCCGGCAAGG +
Preference number: 2 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPPSGPY*LKGPAR
Trigger: CCTTGCCGGCCCCTTCAAGCAATAGGGTCCCGAGGG...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
72% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCGGTGGGGAGAAAGTCTaGGCGGCCGGCCCCGCGCAG +
Preference number: 2 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGGGEKV*AAGPAQ
Trigger: CTGCGCGGGGCCGGCCGCGCAGACTTTCTCCCCACC...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTGGCTCCCTGGACGTCTaGGCCGCAGGCCCTGCGCTA +
Preference number: 2 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGGSLDV*AAGPAL
Trigger: TAGCGCAGGGCCTGCGGCCCAGACGTCCAGGGAGCC...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTCGGGACCCTATTGCTTaGAGGGGCCGGCAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISRDPIA*RGRQGP
Trigger: GGGGCCTTGCCGGCCCCTTCAAGCAATAGGGTCCCG...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTCCCCACCCCCGCCCATaGAACCATTACAGCCGCCGG +
Preference number: 2 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISPHPRP*NHYSRR
Trigger: CCGGCGGCTGTAATGGTTCCATGGGCGGGGGTGGGG...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGCTCCCCCTATTGCTGTaGGGAGGGGCCCGCCCTCCG +
Preference number: 2 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLLPLLL*GGARPP
Trigger: CGGAGGGCGGGCCCCTCCTCACAGCAATAGGGGGAG...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTTCAGCGCCCCCTCCCTaGCCCGAGTGCAATCCGTTC +
Preference number: 2 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISSAPPP*PECNPF
Trigger: GAACGGATTGCACTCGGGTCAGGGAGGGGGCGCTGA...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGCGTCGGCGGGCAAGATaGGGGTTCAGCGCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLRRRAR*GFSAPS
Trigger: GGAGGGGGCGCTGAACCCCCATCTTGCCCGCCGACG...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATAAAAGGCGGCGGCCAATaGGGCGGGCCCTTGGGGCGG +
Preference number: 2 (lower is better)
Translates to: ILVGAATLAAGGEAGHTIKGGGQ*GGPLGR
Trigger: CCGCCCCAAGGGCCCGCCCCATTGGCCGCCGCCTTT...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGGGGGTGGGGAAGACCTaGGTCCCTGCGACGCGATCC +
Preference number: 2 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLGVGKT*VPATRS
Trigger: GGATCGCGTCGCAGGGACTCAGGTCTTCCCCACCCC...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTCGTCGACCCTATTGCTaGGAGAAAGCCGGGGGCACC +
Preference number: 2 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGRRPYC*EKAGGT
Trigger: GGTGCCCCCGGCTTTCTCCCAGCAATAGGGTCGACG...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCGTGCCCAGCAGGGACTaGTTGAGGTGGGGAGGAGTG +
Preference number: 2 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGVPSRD*LRWGGV
Trigger: CACTCCTCCCCACCTCAACCAGTCCCTGCTGGGCAC...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTGTGCCCAGCAGGGACTaGTTGAGGTGGGGAGGAGTG +
Preference number: 2 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISVPSRD*LRWGGV
Trigger: CACTCCTCCCCACCTCAACCAGTCCCTGCTGGGCAC...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGTCAGCGCCCCCTCCCTaGCCCGAGTGCAATCCGTTC +
Preference number: 2 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGSAPPP*PECNPF
Trigger: GAACGGATTGCACTCGGGTCAGGGAGGGGGCGCTGA...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCAGGGGTGGGGCTGCATaGAGTGACGTCACAAAGGCG +
Preference number: 2 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGRGGAA*SDVTKA
Trigger: CGCCTTTGTGACGTCACTGCATGCAGCCCCACCCCT...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GGGGTGGGTAGGGCGAGGGGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCCGTCGGCGGGCAAGATaGGGGTTCAGCGCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: GVGRARGYLILSNSRGGGRRRAR*GFSAPS
Trigger: GGAGGGGGCGCTGAACCCCCATCTTGCCCGCCGACG...GCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCCTACCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 90 bp GGGTGTTTGGATGTGGGCACTGCTGTGCAGAGCGGTGGGTCATCCTaGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACA +
Preference number: 2 (lower is better)
Translates to: GCLDVGTAVQSGGSS*WGQPRLLLGVRLAT
Trigger: TGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCCCACATCCAAACACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGGCGGGCCTCGGGGCGTaGAAAGTAATCCCGGACATC +
Preference number: 2 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLAGLGA*KVIPDI
Trigger: GATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGC...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 90 bp TGGTCTCTCTGCATCTGCCGTTCTTCCCTGGCCCACCCAAGCCGGTaGGACCCCTGTCCTGCAAACACACCTCCCAGCAGGTGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: WSLCICRSSLAHPSR*DPCPANTPPSRWLR
Trigger: GCGCAGCCACCTGCTGGGAGGTGTGTTTGCAGGACAGGGGTCCAACCGGCTTGGGTGGGCCAGGGAAGAACGGCAGATGCAGAGAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 90 bp GGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCACCACACCTGGTaGTGTAGGGTGTTTGGATGTGGGCACTGCTGTGCAGAGCGGTGG +
Preference number: 2 (lower is better)
Translates to: GGQAPAWELCRHHTW*CRVFGCGHCCAERW
Trigger: CCACCGCTCTGCACAGCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGCGGAGAGGCGGGGCCTaGGGCTCCCTAGAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKRRGGA*GSLEAP
Trigger: GGGAGCCTCTAGGGAGCCTCAGGCCCCGCCTCTCCG...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTAGGTGGGGAGAAAGTCTaGGCGGCCGGCCCCGCGCAG +
Preference number: 2 (lower is better)
Translates to: RVAFILLVEVRCSGELVLGGEKV*AAGPAQ
Trigger: CTGCGCGGGGCCGGCCGCGCAGACTTTCTCCCCACC...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCCCCGGGAAGCTGGGCTaGAAGAATTCGGATTTGGCA +
Preference number: 2 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGPGKLG*KNSDLA
Trigger: TGCCAAATCCGAATTCTTCCAGCCCAGCTTCCCGGG...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GGGGTGGGTAGGGCGAGGGGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCAAGTTGGCAACCGAGTaGGGGCGGGGCCTGGGTCTC +
Preference number: 2 (lower is better)
Translates to: GVGRARGYLILSNSRGGGKLATE*GRGLGL
Trigger: GAGACCCAGGCCCCGCCCCCACTCGGTTGCCAACTT...GCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCCTACCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 90 bp TCTCCAGCCATGGCTCTGCCCCTGGCTGGACATGGCAGATGTGTGTaGGCCAGAGGATCAGAGAAGTGGCCACCTGTGTGGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SPAMALPLAGHGRCV*ARGSEKWPPVWGPR
Trigger: CCTGGGCCCCCACACAGGTGGCCACTTCTCTGATCCTCTGGCCAACACACATCTGCCATGTCCAGCCAGGGGCAGAGCCATGGCTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGGAGGGCGGCTCCGACTaGGGCCCCAGAAGCAACCCG +
Preference number: 2 (lower is better)
Translates to: AHYCSIVGFGLPKREGEREGGSD*GPRSNP
Trigger: CGGGTTGCTTCTGGGGCCTCAGTCGGAGCCGCCCTC...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCACAGAGCCCGGGAAGCTaGGCTGGAAGAATTCGGATT +
Preference number: 2 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPQSPGS*AGRIRI
Trigger: AATCCGAATTCTTCCAGCCCAGCTTCCCGGGCTCTG...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAAAAAGGCGGCGGCCAATaGGGCGGGCCCTTGGGGCGG +
Preference number: 2 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQKGGGQ*GGPLGR
Trigger: CCGCCCCAAGGGCCCGCCCCATTGGCCGCCGCCTTT...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATACCCACCCAAGCCGGTTaGACCCCTGTCCTGCAAACA +
Preference number: 2 (lower is better)
Translates to: ILVGAATLAAGGEAGHTIPTQAG*TPVLQT
Trigger: TGTTTGCAGGACAGGGGTCCAACCGGCTTGGGTGGG...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTGAGGGCGGCTCCGACTaGGGCCCCAGAAGCAACCCG +
Preference number: 2 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIEGGSD*GPRSNP
Trigger: CGGGTTGCTTCTGGGGCCTCAGTCGGAGCCGCCCTC...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCCTGGGCCGCAGGCCCTaGGCTAGAAGGCTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCLGRRP*ARRLGK
Trigger: CTTCCCAAGCCTTCTAGCGCAGGGCCTGCGGCCCAG...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTCGGGACCCTATTGCTTaGAGGGGCCGGCAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIRDPIA*RGRQGP
Trigger: GGGGCCTTGCCGGCCCCTTCAAGCAATAGGGTCCCG...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTGGAAGCAGGAGACCCTaGCGGGCCCACAGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIGSRRP*RAHSPP
Trigger: TGGAGGGCTGTGGGCCCGTCAGGGTCTCCTGCTTCC...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTTCTGTCCGGCCGGCCTaGCCCCAAATGGGGGCGGAA +
Preference number: 2 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAISVRPA*PQMGAE
Trigger: TTCCGCCCCCATTTGGGGCCAGGCCGGCCGGACAGA...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 90 bp CAGCTTGGGAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTaGGATGTGGGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGG +
Preference number: 2 (lower is better)
Translates to: QLGSCAGTTPGCVGC*DVGTAVQSGGSSLW
Trigger: CCACAAGGATGACCCACCGCTCTGCACAGCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTCCCAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGGGGGTGGGGAAGACCTaGGTCCCTGCGACGCGATCC +
Preference number: 2 (lower is better)
Translates to: SAHYCSIVGFGLPKREGEGVGKT*VPATRS
Trigger: GGATCGCGTCGCAGGGACTCAGGTCTTCCCCACCCC...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTGAAGACCTGAGTCCCTaGGACGCGATCCAGGGGCGC +
Preference number: 2 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIEDLSP*DAIQGR
Trigger: GCGCCCCTGGATCGCGTCGCAGGGACTCAGGTCTTC...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTACCCCACCCCCGCCCATaGAACCATTACAGCCGCCGG +
Preference number: 2 (lower is better)
Translates to: APAPRALLVESVQNRCYLPHPRP*NHYSRR
Trigger: CCGGCGGCTGTAATGGTTCCATGGGCGGGGGTGGGG...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTAGGTGGGTCATCCTTGTaGGGGCAGCCACGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: RVAFILLVEVRCSGELVLGGSSL*GQPRLL
Trigger: CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACC...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAATGCATGCGGCACAGGTaGGCAGGCCCCAGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQCMRHR*AGPSLG
Trigger: TCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCA...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCTGGGCCGCAGGCCCTaGGCTAGAAGGCTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: SAHYCSIVGFGLPKREGELGRRP*ARRLGK
Trigger: CTTCCCAAGCCTTCTAGCGCAGGGCCTGCGGCCCAG...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCCAGCGAAGACTTCCCTaGGGGGCCGTATTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCQRRLP*GAVLLR
Trigger: TCTCAGCAATACGGCCCCCCAGGGAAGTCTTCGCTG...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGAAGTTGGCAACCGAGTaGGGGCGGGGCCTGGGTCTC +
Preference number: 2 (lower is better)
Translates to: SAHYCSIVGFGLPKREGEKLATE*GRGLGL
Trigger: GAGACCCAGGCCCCGCCCCCACTCGGTTGCCAACTT...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAATCTGCCGTTCTTCCCTaGCCCACCCAAGCCGGTTGG +
Preference number: 2 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQSAVLP*PTQAGW
Trigger: CCAACCGGCTTGGGTGGGCCAGGGAAGAACGGCAGA...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTACTTCTTCTCCAGCCATaGCTCTGCCCCTGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: RVAFILLVEVRCSGELVLLLLQP*LCPWLD
Trigger: GTCCAGCCAGGGGCAGAGCCATGGCTGGAGAAGAAG...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAATCTCGTCGACCCTATTaGTGGGAGAAAGCCGGGGGC +
Preference number: 2 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQSRRPY*WEKAGG
Trigger: GCCCCCGGCTTTCTCCCAGCAATAGGGTCGACGAGA...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTTCTCGTCGACCCTATTaGTGGGAGAAAGCCGGGGGC +
Preference number: 2 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAISRRPY*WEKAGG
Trigger: GCCCCCGGCTTTCTCCCAGCAATAGGGTCGACGAGA...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAAAGGGGTGGGGCTGCATaGAGTGACGTCACAAAGGCG +
Preference number: 2 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQRGGAA*SDVTKA
Trigger: CGCCTTTGTGACGTCACTGCATGCAGCCCCACCCCT...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGTCGACCCTATTGCTaGGAGAAAGCCGGGGGCACC +
Preference number: 2 (lower is better)
Translates to: SAHYCSIVGFGLPKREGERRPYC*EKAGGT
Trigger: GGTGCCCCCGGCTTTCTCCCAGCAATAGGGTCGACG...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTAGCGGGCCTCGGGGCGTaGAAAGTAATCCCGGACATC +
Preference number: 2 (lower is better)
Translates to: APAPRALLVESVQNRCYLAGLGA*KVIPDI
Trigger: GATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGC...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATCGCCGCCGAGGCTTTaGCATAGACGGGCGAAAGTT +
Preference number: 2 (lower is better)
Translates to: RVAFILLVEVRCSGELVLSPPRL*HRRAKV
Trigger: AACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGA...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATAATGGCAGATGTGTGTTaGCCAGAGGATCAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: ILVGAATLAAGGEAGHTIMADVC*PEDQRS
Trigger: ACTTCTCTGATCCTCTGGCCAACACACATCTGCCAT...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAAGCCCCTGGCTGGACATaGCAGATGTGTGTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQAPGWT*QMCVGQ
Trigger: CTGGCCAACACACATCTGCCATGTCCAGCCAGGGGC...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTCCATGGCTCTGCCCCTaGCTGGACATGGCAGATGTG +
Preference number: 2 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIPWLCP*LDMADV
Trigger: CACATCTGCCATGTCCAGCCAGGGGCAGAGCCATGG...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGGGTCGGATAAGTCCATaGGATTCGATATGTGTCATT +
Preference number: 2 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGGRISP*DSICVI
Trigger: AATGACACATATCGAATCGCATGGACTTATCCGACC...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTTTTGGATGTGGGCACTaGTGTGCAGAGCGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIFGCGH*CAERWV
Trigger: GACCCACCGCTCTGCACAGCAGTGCCCACATCCAAA...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGCCCGGGAAGCTGGGCTaGAAGAATTCGGATTTGGCA +
Preference number: 2 (lower is better)
Translates to: AHYCSIVGFGLPKREGERPGKLG*KNSDLA
Trigger: TGCCAAATCCGAATTCTTCCAGCCCAGCTTCCCGGG...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTATGCTGTGCAGAGCGGTaGGTCATCCTTGTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: APAPRALLVESVQNRCYLCCAER*VILVGA
Trigger: TGCCCCCACAAGGATGACCCACCGCTCTGCACAGCA...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTAGGGCGAGGGGATACCTaGTTCTCAGTAACTCTAGAG +
Preference number: 2 (lower is better)
Translates to: RVAFILLVEVRCSGELVLGRGDT*FSVTLE
Trigger: CTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCC...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTACAGCGAAGACTTCCCTaGGGGGCCGTATTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: APAPRALLVESVQNRCYLQRRLP*GAVLLR
Trigger: TCTCAGCAATACGGCCCCCCAGGGAAGTCTTCGCTG...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTATCGCCGCCGAGGCTTTaGCATAGACGGGCGAAAGTT +
Preference number: 2 (lower is better)
Translates to: APAPRALLVESVQNRCYLSPPRL*HRRAKV
Trigger: AACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGA...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAAGTGAACCTAGGGACCTaGTCTCTCTGCATCTGCCGT +
Preference number: 2 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQVNLGT*SLCICR
Trigger: ACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCAC...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR TCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTAGACCCAACTCGGAGATaGGGTTCGGTTCTAGGTCTC +
Preference number: 2 (lower is better)
Translates to: APAPRALLVESVQNRCYLDPTRR*GSVLGL
Trigger: GAGACCTAGAACCGAACCTCATCTCCGAGTTGGGTC...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATCCCTCGGGACCCTATTaGTTGAAGGGGCCGGCAAGG +
Preference number: 2 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYPSGPY*LKGPAR
Trigger: CCTTGCCGGCCCCTTCAAGCAATAGGGTCCCGAGGG...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTAGGCGGCAGCTTCGCATaGAGTGCGCATTATTGCTCT +
Preference number: 2 (lower is better)
Translates to: APAPRALLVESVQNRCYLGGSFA*SAHYCS
Trigger: AGAGCAATAATGCGCACTGCATGCGAAGCTGCCGCC...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCAGAGCCCGGGAAGCTaGGCTGGAAGAATTCGGATT +
Preference number: 2 (lower is better)
Translates to: SAHYCSIVGFGLPKREGEQSPGS*AGRIRI
Trigger: AATCCGAATTCTTCCAGCCCAGCTTCCCGGGCTCTG...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAATGCAGGCACCACACCTaGTTGTGTAGGGTGTTTGGA +
Preference number: 2 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQCRHHT*LCRVFG
Trigger: TCCAAACACCCTACACAACCAGGTGTGGTGCCTGCA...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 90 bp GTGCTACCTAAACGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATaGTGCTGCTTAGTTATGGGGGCGGGAGGGGGCCCATGGCTTTCC +
Preference number: 2 (lower is better)
Translates to: VLPKRSFYLNSLSRL*CCLVMGAGGGPWLS
Trigger: GGAAAGCCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACGTTTAGGTAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR GCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTAGGTCGGATAAGTCCATaGGATTCGATATGTGTCATT +
Preference number: 2 (lower is better)
Translates to: APAPRALLVESVQNRCYLGRISP*DSICVI
Trigger: AATGACACATATCGAATCGCATGGACTTATCCGACC...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp CCGGCCCCTCCACCCGGACGCCAGCGAAGACTTCCCTaGGGGGCCGTATTGCTGAGAGCCGACCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: PAPPPGRQRRLP*GAVLLRADLAG
Trigger: CCCAGCCAGGTCGGCTCTCAGCAATACGGCCCCCCAGGGAAGTCTTCGCTGGCGTCCGGGTGGAGGGGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp GGGCGGGCCCTTGGGGCGGGGTCGCCGCCGAGGCTTTaGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGG +
Preference number: 3 (lower is better)
Translates to: GRALGAGSPPRL*HRRAKVGNRVG
Trigger: CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCCCGCCCCAAGGGCCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCACCCCTCGGGACCCTATaGCTTGAAGGGGCCGGCAAG +
Preference number: 3 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPPLGTL*LEGAGK
Trigger: CTTGCCGGCCCCTTCAAGCAATAGGGTCCCGAGGGG...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 72 bp CGAAGACAGAGGTGTGTAGAGGGCAGCGCCCAGGCCTaGCTGCCGGCCCCGGGAATCCGTCCTCCAACACGA +
Preference number: 3 (lower is better)
Translates to: RRQRCVEGSAQA*LPAPGIRPPTR
Trigger: TCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGGGCGCTGCCCTCTACACACCTCTGTCTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp GTGGGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTaGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: VGTAVQSGGSSL*GQPRLLLGVRL
Trigger: CAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGGTCTCGTCGACCCTATaGCTGGGAGAAAGCCGGGGG +
Preference number: 3 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLVSSTL*LGESRG
Trigger: CCCCCGGCTTTCTCCCAGCAATAGGGTCGACGAGAC...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp CACCCCCGCCCATGGAACCATTACAGCCGCCGGGCTCTGCCGTGGGGGTCGGGGTGGAAGAATTCGGATTaGGCAGAGGATGCGAGGCGA +
Preference number: 3 (lower is better)
Translates to: HPRPWNHYSRRALPWGSGWKNSD*AEDARR
Trigger: TCGCCTCGCATCCTCTGCCAAATCCGAATTCTTCCA...CCCCGACCCCCACGGCAGAGCCCGGCGGCTGTAATGGTTCCATGGGCGGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp GTGTTGGCCAGAGGATCAGAGAAGTGGCCACCTGTGTaGGGGCCCAGGAGCCCTGGATCTGTCCCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: VLARGSEKWPPV*GPRSPGSVPLS
Trigger: GCTGAGGGGGACAGATCCAGGGCTCCTGGGCCCCCACACAGGTGGCCACTTCTCTGATCCTCTGGCCAACAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp GGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTaGGAATATGTACAAGGCGGCGGGGCACAGGCGGGG +
Preference number: 3 (lower is better)
Translates to: GTARVKIPAYSG*EYVQGGGAQAG
Trigger: CCCCGCCTGTGCCCCGCCGCCTTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCTGGCGGACTCAGCAATaGGCCTGGCACATAGTAGGT +
Preference number: 3 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGWRTQQ*AWHIVG
Trigger: ACCTACTATGTGCCAGGCCAATTGCTGAGTCCGCCA...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 72 bp TGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTaGAGGCACCACACCTGGTTGTGTAGGGTGTTTGGA +
Preference number: 3 (lower is better)
Translates to: CGTGGQAPAWEL*RHHTWLCRVFG
Trigger: TCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 72 bp GGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTaGCGTTCTTCCCTGGCCCACCCAAGCCGGTTGGAC +
Preference number: 3 (lower is better)
Translates to: GHVNLGTWSLCI*RSSLAHPSRLD
Trigger: GTCCAACCGGCTTGGGTGGGCCAGGGAAGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 72 bp GTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTGTaGTTAGGAAGGAGGTCTGTCCGTCCGTCCGTCTGT +
Preference number: 3 (lower is better)
Translates to: VEVRCSGELVLL*LGRRSVRPSVC
Trigger: ACAGACGGACGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCCCGGAGCACCGCACCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp GGGGAGGAGTGTAGGGGGCATGTGAACCTAGGGACCTaGTCTCTCTGCATCTGCCGTTCTTCCCTGGCCCAC +
Preference number: 3 (lower is better)
Translates to: GEECRGHVNLGT*SLCICRSSLAH
Trigger: GTGGGCCAGGGAAGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTCCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp AGGGTGTTTGGATGTGGGCACTGCTGTGCAGAGCGGTaGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGCT +
Preference number: 3 (lower is better)
Translates to: RVFGCGHCCAER*VILVGAATLAA
Trigger: AGCAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCCCACATCCAAACACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp CCTGCAAACACACCTCCCAGCAGGTGGCTGCGCTCCTaGCGGACTCAGCAATTGGCCTGGCACATAGTAGGT +
Preference number: 3 (lower is better)
Translates to: PANTPPSRWLRS*RTQQLAWHIVG
Trigger: ACCTACTATGTGCCAGGCCAATTGCTGAGTCCGCCAGGAGCGCAGCCACCTGCTGGGAGGTGTGTTTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAAAGCGGTGGGTCATCCTaGTGGGGGCAGCCACGCTTG +
Preference number: 3 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQSGGSS*WGQPRL
Trigger: CAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCT...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 72 bp CACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTaGTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: HTWLCRVFGCGH*CAERWVILVGA
Trigger: TGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp AGCTGGCACCTTCTTCTCCAGCCATGGCTCTGCCCCTaGCTGGACATGGCAGATGTGTGTTGGCCAGAGGAT +
Preference number: 3 (lower is better)
Translates to: SWHLLLQPWLCP*LDMADVCWPED
Trigger: ATCCTCTGGCCAACACACATCTGCCATGTCCAGCCAGGGGCAGAGCCATGGCTGGAGAAGAAGGTGCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTGTCTCGTCGACCCTATaGCTGGGAGAAAGCCGGGGG +
Preference number: 3 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIVSSTL*LGESRG
Trigger: CCCCCGGCTTTCTCCCAGCAATAGGGTCGACGAGAC...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAACCTGCGCTAGAAGGCTaGGGAAGGGGTGGGGAAGAC +
Preference number: 3 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQPALEG*GRGGED
Trigger: GTCTTCCCCACCCCTTCCCAAGCCTTCTAGCGCAGG...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGATAGACGGGCGAAAGTaGGCAACCGAGTGGGGGCGG +
Preference number: 3 (lower is better)
Translates to: SAHYCSIVGFGLPKREGEIDGRK*ATEWGR
Trigger: CCGCCCCCACTCGGTTGCCAACTTTCGCCCGTCTAT...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR TCA 72 bp CACCTCACCCCCGTCTTCAGAGACCCAACTCGGAGATaGGGTTCGGTTCTAGGTCTCGTCGACCCTATTGCT +
Preference number: 3 (lower is better)
Translates to: HLTPVFRDPTRR*GSVLGLVDPIA
Trigger: AGCAATAGGGTCGACGAGACCTAGAACCGAACCTCATCTCCGAGTTGGGTCTCTGAAGACGGGGGTGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 72 bp AGAGGCGGCGGCAGCTTCGCATGCAGTGCGCATTATTaGTCTATAGTCGGCTTCGGACTACCTAAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: RGGGSFACSAHY*SIVGFGLPKRE
Trigger: CTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACTGCATGCGAAGCTGCCGCCGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CCA 72 bp TTCTTCTCCAGCCATGGCTCTGCCCCTGGCTGGACATaGCAGATGTGTGTTGGCCAGAGGATCAGAGAAGTG +
Preference number: 3 (lower is better)
Translates to: FFSSHGSAPGWT*QMCVGQRIREV
Trigger: CACTTCTCTGATCCTCTGGCCAACACACATCTGCCATGTCCAGCCAGGGGCAGAGCCATGGCTGGAGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATCCCCTCGGGACCCTATaGCTTGAAGGGGCCGGCAAG +
Preference number: 3 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYPLGTL*LEGAGK
Trigger: CTTGCCGGCCCCTTCAAGCAATAGGGTCCCGAGGGG...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGTGGAAGAATTCGGATTaGGCAGAGGATGCGAGGCGA +
Preference number: 3 (lower is better)
Translates to: AHYCSIVGFGLPKREGERWKNSD*AEDARR
Trigger: TCGCCTCGCATCCTCTGCCAAATCCGAATTCTTCCA...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCATGCAGTGCGCATTATaGCTCTATAGTCGGCTTCGG +
Preference number: 3 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCMQCAL*LYSRLR
Trigger: CCGAAGCCGACTATAGAGCAATAATGCGCACTGCAT...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 72 bp CGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATTGTaGTGCTTAGTTATGGGGGCGGGAGGGGGCCCATGG +
Preference number: 3 (lower is better)
Translates to: RSFYLNSLSRLL*CLVMGAGGGPW
Trigger: CCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 72 bp TCCTTCTACCTGAATTCGCTAAGTCGGTTATTGTGCTaGTTAGTTATGGGGGCGGGAGGGGGCCCATGGCTT +
Preference number: 3 (lower is better)
Translates to: SFYLNSLSRLLC*LVMGAGGGPWL
Trigger: AAGCCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR GCA 72 bp ATTCTCAGTAACTCTAGAGGCGGCGGCAGCTTCGCATaGAGTGCGCATTATTGCTCTATAGTCGGCTTCGGA +
Preference number: 3 (lower is better)
Translates to: ILSNSRGGGSFA*SAHYCSIVGFG
Trigger: TCCGAAGCCGACTATAGAGCAATAATGCGCACTGCATGCGAAGCTGCCGCCGCCTCTAGAGTTACTGAGAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR-3UTR CAA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAATCGCTAAGTCGGTTATaGTGCTGCTTAGTTATGGGG +
Preference number: 3 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQSLSRL*CCLVMG
Trigger: CCCCATAACTAAGCAGCACAATAACCGACTTAGCGA...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCAGGCCTGCACAGGGCTaGGCTGTGGCGGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPRPAQG*AVAAQE
Trigger: CTCCTGCGCCGCCACAGCTCAGCCCTGTGCAGGCCT...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCCGGCAGCGCCGGCATTaGAAGCCTTACGCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPRQRRH*KPYAAS
Trigger: GCTCGCGGCGTAAGGCTTCCAATGCCGGCGCTGCCG...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCCTGCGTCTCCTCCGTTaGCCCTCCGGATCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPLRLLR*PSGSLF
Trigger: GAAGAGGGATCCGGAGGGGCAACGGAGGAGACGCAG...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CACCCCCGCCCATGGAACCATTACAGCCGCCGGGCTCTGCCGTGGGGGTCGGGGCGCGGGTCCCCACTCTaGCCTTTGGATGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: HPRPWNHYSRRALPWGSGRGSPL*PLDAAA
Trigger: CGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCG...CCCCGACCCCCACGGCAGAGCCCGGCGGCTGTAATGGTTCCATGGGCGGGGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCGCGGGCCTCGGGGCGTaGAAAGTAATCCCGGACATC +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPAGLGA*KVIPDI
Trigger: GATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGC...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCCTCCCCCTATTGCTGTaGGGAGGGGCCCGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGLPLLL*GGARPP
Trigger: CGGAGGGCGGGCCCCTCCTCACAGCAATAGGGGGAG...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCACGGAGAGGCGGGGCCTaGGGCTCCCTAGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPRRGGA*GSLEAP
Trigger: GGGAGCCTCTAGGGAGCCTCAGGCCCCGCCTCTCCG...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp CTCGGGGCGTGGAAAGTAATCCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAGGAAGCAGGAGACCCTaGCGGGCCCACAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGAWKVIPDIPGPRRRRAGSRRP*RAHSPP
Trigger: TGGAGGGCTGTGGGCCCGTCAGGGTCTCCTGCTTCC...TGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGGATTACTTTCCACGCCCCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCACGTGGCGTATGTTTTaGCGCACTCGCCGCACGCGT +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPTWRMF*RTRRTR
Trigger: ACGCGTGCGGCGAGTGCGGCAAAACATACGCCACGT...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCTCTCGTCGACCCTATTaGTGGGAGAAAGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPSRRPY*WEKAGG
Trigger: GCCCCCGGCTTTCTCCCAGCAATAGGGTCGACGAGA...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CACCCCCGCCCATGGAACCATTACAGCCGCCGGGCTCTGCCGTGGGGGTCGGGGGAAGACCTGAGTCCCTaGGACGCGATCCAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: HPRPWNHYSRRALPWGSGEDLSP*DAIQGR
Trigger: GCGCCCCTGGATCGCGTCGCAGGGACTCAGGTCTTC...CCCCGACCCCCACGGCAGAGCCCGGCGGCTGTAATGGTTCCATGGGCGGGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCAGAGGATCAGAGAAGTaGCCACCTGTGTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPRGSEK*PPVWGP
Trigger: GGGCCCCCACACAGGTGGCCACTTCTCTGATCCTCT...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCGCCCCACGTAGTCGCTaGGGTACCCTTTATCGTGCA +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPAPRSR*GTLYRA
Trigger: TGCACGATAAAGGGTACCTCAGCGACTACGTGGGGC...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGCCGGCGACGGCCCTTTaGGCAGCGCAGCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLPATAL*AAQPRR
Trigger: ACGCCGAGGCTGCGCTGCTCAAAGGGCCGTCGCCGG...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTCTCCGGCGCCGCCCTTaGAGCAGGCCGACTCGTAGT +
Preference number: 4 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISLRRRP*SRPTRS
Trigger: ACTACGAGTCGGCCTGCTTCAAGGGCGGCGCCGGAG...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCCGGGACCCTATTGCTTaGAGGGGCCGGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGRDPIA*RGRQGP
Trigger: GGGGCCTTGCCGGCCCCTTCAAGCAATAGGGTCCCG...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCGGGGTGGGGAAGACCTaGGTCCCTGCGACGCGATCC +
Preference number: 4 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGGVGKT*VPATRS
Trigger: GGATCGCGTCGCAGGGACTCAGGTCTTCCCCACCCC...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCCCCGCGCAGCGTCCCTaGTCTAGGGGCCTATGGGGT +
Preference number: 4 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGPAQRP*SRGLWG
Trigger: ACCCCATAGGCCCCTAGATCAGGGACGCTGCGCGGG...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCACGTCGGCGGGCAAGATaGGGGTTCAGCGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPRRRAR*GFSAPS
Trigger: GGAGGGGGCGCTGAACCCCCATCTTGCCCGCCGACG...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCCGCTTGCACTGGAAGTaGTTGAAGGCCGAATGCGTC +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPRLHWK*LKAECV
Trigger: GACGCATTCGGCCTTCAAGCACTTCCAGTGCAAGCG...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTCTGGGCCGCAGGCCCTaGGCTAGAAGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISLGRRP*ARRLGK
Trigger: CTTCCCAAGCCTTCTAGCGCAGGGCCTGCGGCCCAG...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATAGGTGGGGAGAAAGTCTaGGCGGCCGGCCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: ILVGAATLAAGGEAGHTIGGEKV*AAGPAQ
Trigger: CTGCGCGGGGCCGGCCGCGCAGACTTTCTCCCCACC...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCAAGTTGGCAACCGAGTaGGGGCGGGGCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGKLATE*GRGLGL
Trigger: GAGACCCAGGCCCCGCCCCCACTCGGTTGCCAACTT...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTTGCATGCGGCACAGGTaGGCAGGCCCCAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGCMRHR*AGPSLG
Trigger: TCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCA...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 72 bp GGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTaGGCAACCGAGTGGGGGCGGGGCCTGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRRRGFGIDGRK*ATEWGRGLGLR
Trigger: CCTGAGACCCAGGCCCCGCCCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGGGAAGGACCTGGGCATaGTTCCTGCGGGGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLGRTWA*FLRGSG
Trigger: GCCGGAGCCCCGCAGGAATCATGCCCAGGTCCTTCC...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp CACCCCCGCCCATGGAACCATTACAGCCGCCGGGCTCTGCCGTGGGGGTCGGGGGCCCCACGTAGTCGCTaGGGTACCCTTTATCGTGCA +
Preference number: 4 (lower is better)
Translates to: HPRPWNHYSRRALPWGSGAPRSR*GTLYRA
Trigger: TGCACGATAAAGGGTACCTCAGCGACTACGTGGGGC...CCCCGACCCCCACGGCAGAGCCCGGCGGCTGTAATGGTTCCATGGGCGGGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCGGGCGAGGGGATACCTaGTTCTCAGTAACTCTAGAG +
Preference number: 4 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPGRGDT*FSVTLE
Trigger: CTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCC...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTCTCTCCTTGCTGCCCTaGGTCTCCTCCGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISLSLLP*VSSVAP
Trigger: AGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAG...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTCTCTCCTTGCTGCCCTaGGTCTCCTCCGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGLSLLP*VSSVAP
Trigger: AGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAG...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCAGAAGACCTGAGTCCCTaGGACGCGATCCAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPEDLSP*DAIQGR
Trigger: GCGCCCCTGGATCGCGTCGCAGGGACTCAGGTCTTC...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTTTCTCCTTGTGGAGGTaGGGTGCTCCGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGFSLWR*GAPGSW
Trigger: CCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAA...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCACCCTTTATCGTGCAGTaGCGCGCCGAGGTCGCTGCG +
Preference number: 4 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPPFIVQ*RAEVAA
Trigger: CGCAGCGACCTCGGCGCGCCACTGCACGATAAAGGG...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATAGGCTCCCTGGACGTCTaGGCCGCAGGCCCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: ILVGAATLAAGGEAGHTIGSLDV*AAGPAL
Trigger: TAGCGCAGGGCCTGCGGCCCAGACGTCCAGGGAGCC...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CACCCCCGCCCATGGAACCATTACAGCCGCCGGGCTCTGCCGTGGGGGTCGGGGTCGCCGCCGAGGCTTTaGCATAGACGGGCGAAAGTT +
Preference number: 4 (lower is better)
Translates to: HPRPWNHYSRRALPWGSGSPPRL*HRRAKV
Trigger: AACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGA...CCCCGACCCCCACGGCAGAGCCCGGCGGCTGTAATGGTTCCATGGGCGGGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCACTGCGTCTCCTCCGTTaGCCCTCCGGATCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPLRLLR*PSGSLF
Trigger: GAAGAGGGATCCGGAGGGGCAACGGAGGAGACGCAG...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCACTCTGGCCTTTGGATaGTGCCGCGCGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGTLAFG*CRASGV
Trigger: GACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGT...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CTCGGGGCGTGGAAAGTAATCCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAGGGACCTGGTCTCTCTaGATCTGCCGTTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LGAWKVIPDIPGPRRRRAGTWSL*ICRSSL
Trigger: CAGGGAAGAACGGCAGATGCAGAGAGACCAGGTCCC...TGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGGATTACTTTCCACGCCCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTATGCTGCCGCGCGAGTaGTGTCCTCTCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISMLPRE*CPLSLL
Trigger: CAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCAT...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGCAGCTGCTGCGTACATaGGCTCCGGCGACGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLQLLRT*APATAL
Trigger: AAGGGCCGTCGCCGGAGCCCATGTACGCAGCAGCTG...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCAGCGGGCCTCGGGGCGTaGAAAGTAATCCCGGACATC +
Preference number: 4 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPAGLGA*KVIPDI
Trigger: GATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGC...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGAAGTTGGCAACCGAGTaGGGGCGGGGCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLKLATE*GRGLGL
Trigger: GAGACCCAGGCCCCGCCCCCACTCGGTTGCCAACTT...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGTGCATGCGGCACAGGTaGGCAGGCCCCAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGCMRHR*AGPSLG
Trigger: TCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCA...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 72 bp GATGTGGGCACTGCTGTGCAGAGCGGTGGGTCATCCTaGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: DVGTAVQSGGSS*WGQPRLLLGVR
Trigger: CCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCCCACATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTACGGCCGCGTCGCCGTTaGTGTAGCCGCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLRPRRR*CSRPQR
Trigger: CCGCTGCGGGCGGCTACATCAACGGCGACGCGGCCG...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGCGGCCGCGTCGCCGTTaGTGTAGCCGCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKRPRRR*CSRPQR
Trigger: CCGCTGCGGGCGGCTACATCAACGGCGACGCGGCCG...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTTTTGGATGTGGGCACTaGTGTGCAGAGCGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGFGCGH*CAERWV
Trigger: GACCCACCGCTCTGCACAGCAGTGCCCACATCCAAA...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGTTCTCCTTGTGGAGGTaGGGTGCTCCGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLFSLWR*GAPGSW
Trigger: CCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAA...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGTCTGCCGTTCTTCCCTaGCCCACCCAAGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGSAVLP*PTQAGW
Trigger: CCAACCGGCTTGGGTGGGCCAGGGAAGAACGGCAGA...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGTCTGCCGTTCTTCCCTaGCCCACCCAAGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLSAVLP*PTQAGW
Trigger: CCAACCGGCTTGGGTGGGCCAGGGAAGAACGGCAGA...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGGTGCCCAGCAGGGACTaGTTGAGGTGGGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLVPSRD*LRWGGV
Trigger: CACTCCTCCCCACCTCAACCAGTCCCTGCTGGGCAC...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGGGTGGGTAGGGCGAGGGGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCTCTGTCCGGCCGGCCTaGCCCCAAATGGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: GVGRARGYLILSNSRGGGSVRPA*PQMGAE
Trigger: TTCCGCCCCCATTTGGGGCCAGGCCGGCCGGACAGA...GCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCCTACCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCAGGCCTGCACAGGGCTaGGCTGTGGCGGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCRPAQG*AVAAQE
Trigger: CTCCTGCGCCGCCACAGCTCAGCCCTGTGCAGGCCT...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTACGGAGAGGCGGGGCCTaGGGCTCCCTAGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLRRGGA*GSLEAP
Trigger: GGGAGCCTCTAGGGAGCCTCAGGCCCCGCCTCTCCG...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGGTCCTCTCTCCTTGCTaGCCTGCGTCTCCTCCGTTG +
Preference number: 4 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGVLSPC*PASPPL
Trigger: CAACGGAGGAGACGCAGGGCAGCAAGGAGAGAGGAC...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATACTGGCCTTTGGATGCTaGCGCGCGAGTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ILVGAATLAAGGEAGHTILAFGC*RASGVL
Trigger: GAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAG...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCCGCTTGCACTGGAAGTaGTTGAAGGCCGAATGCGTC +
Preference number: 4 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGRLHWK*LKAECV
Trigger: GACGCATTCGGCCTTCAAGCACTTCCAGTGCAAGCG...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTGCCGTTCTGGTGGGGAGAAAGTCTaGGCGGCCGGCCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: ECRGHVNLGTWSLCICRSGGEKV*AAGPAQ
Trigger: CTGCGCGGGGCCGGCCGCGCAGACTTTCTCCCCACC...AGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CACCCCCGCCCATGGAACCATTACAGCCGCCGGGCTCTGCCGTGGGGGTCGGGGAGTCGGTTATTGTGCTaGTTAGTTATGGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: HPRPWNHYSRRALPWGSGSRLLC*LVMGAG
Trigger: TCCCGCCCCCATAACTAAGCAGCACAATAACCGACT...CCCCGACCCCCACGGCAGAGCCCGGCGGCTGTAATGGTTCCATGGGCGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGGGTGGGTAGGGCGAGGGGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCCCCCACTCTGGCCTTTaGATGCTGCCGCGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: GVGRARGYLILSNSRGGGPHSGL*MLPREW
Trigger: CCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGG...GCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCCTACCCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTAAAAGGCGGCGGCCAATaGGGCGGGCCCTTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLKGGGQ*GGPLGR
Trigger: CCGCCCCAAGGGCCCGCCCCATTGGCCGCCGCCTTT...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTCATTTATTCTCCTTGTaGAGGTGCGGTGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGHLFSL*RCGAPG
Trigger: CCCCGGAGCACCGCACCTCCACAAGGAGAATAAATG...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGGAGGGCGGCTCCGACTaGGGCCCCAGAAGCAACCCG +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKEGGSD*GPRSNP
Trigger: CGGGTTGCTTCTGGGGCCTCAGTCGGAGCCGCCCTC...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCCCTGGGCATGATTCCTaGGGGGCTCCGGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCPGHDS*GAPALW
Trigger: CCACAGCGCCGGAGCCCCGCAGGAATCATGCCCAGG...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCAGCGCGAAGCTCTTCTTaGAGCGCTTGCACTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPARSSS*SACTGS
Trigger: ACTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGC...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGATGTGGGCACTGCTGTaGAGAGCGGTGGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLMWALL*RAVGHP
Trigger: AGGATGACCCACCGCTCTGCACAGCAGTGCCCACAT...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CACCCCCGCCCATGGAACCATTACAGCCGCCGGGCTCTGCCGTGGGGGTCGGGGATGGCAGATGTGTGTTaGCCAGAGGATCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: HPRPWNHYSRRALPWGSGMADVC*PEDQRS
Trigger: ACTTCTCTGATCCTCTGGCCAACACACATCTGCCAT...CCCCGACCCCCACGGCAGAGCCCGGCGGCTGTAATGGTTCCATGGGCGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGTGCACTGGAAGTGCTTaGAGGCCGAATGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGCTGSA*RPNASA
Trigger: TGCAGACGCATTCGGCCTTCAAGCACTTCCAGTGCA...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGGACCCAACTCGGAGATaGGGTTCGGTTCTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGDPTRR*GSVLGL
Trigger: GAGACCTAGAACCGAACCTCATCTCCGAGTTGGGTC...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGCCCGCGCAGCGTCCCTaGTCTAGGGGCCTATGGGGT +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKPAQRP*SRGLWG
Trigger: ACCCCATAGGCCCCTAGATCAGGGACGCTGCGCGGG...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTAGGAAGCAGGAGACCCTaGCGGGCCCACAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLGSRRP*RAHSPP
Trigger: TGGAGGGCTGTGGGCCCGTCAGGGTCTCCTGCTTCC...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAAGGCTCCCTGGACGTCTaGGCCGCAGGCCCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQGSLDV*AAGPAL
Trigger: TAGCGCAGGGCCTGCGGCCCAGACGTCCAGGGAGCC...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGCAGAGCCCGGGAAGCTaGGCTGGAAGAATTCGGATT +
Preference number: 4 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGQSPGS*AGRIRI
Trigger: AATCCGAATTCTTCCAGCCCAGCTTCCCGGGCTCTG...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTCGTCGGCGGGCAAGATaGGGGTTCAGCGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIRRRAR*GFSAPS
Trigger: GGAGGGGGCGCTGAACCCCCATCTTGCCCGCCGACG...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGCCCCACCCCCGCCCATaGAACCATTACAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKPHPRP*NHYSRR
Trigger: CCGGCGGCTGTAATGGTTCCATGGGCGGGGGTGGGG...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTGCCGTTCTCCCCACCCCCGCCCATaGAACCATTACAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: ECRGHVNLGTWSLCICRSPHPRP*NHYSRR
Trigger: CCGGCGGCTGTAATGGTTCCATGGGCGGGGGTGGGG...AGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGGGTGGGTAGGGCGAGGGGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCTGCTGTGCAGAGCGGTaGGTCATCCTTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GVGRARGYLILSNSRGGGCCAER*VILVGA
Trigger: TGCCCCCACAAGGATGACCCACCGCTCTGCACAGCA...GCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCCTACCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTACTGGGCCGCAGGCCCTaGGCTAGAAGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLLGRRP*ARRLGK
Trigger: CTTCCCAAGCCTTCTAGCGCAGGGCCTGCGGCCCAG...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CACCCCCGCCCATGGAACCATTACAGCCGCCGGGCTCTGCCGTGGGGGTCGGGGGGTCGGATAAGTCCATaGGATTCGATATGTGTCATT +
Preference number: 4 (lower is better)
Translates to: HPRPWNHYSRRALPWGSGGRISP*DSICVI
Trigger: AATGACACATATCGAATCGCATGGACTTATCCGACC...CCCCGACCCCCACGGCAGAGCCCGGCGGCTGTAATGGTTCCATGGGCGGGGGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATAGGCGGCAGCTTCGCATaGAGTGCGCATTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: ILVGAATLAAGGEAGHTIGGSFA*SAHYCS
Trigger: AGAGCAATAATGCGCACTGCATGCGAAGCTGCCGCC...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTCTAAGTCGGTTATTGTaGTGCTTAGTTATGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGLSRLL*CLVMGA
Trigger: CGCCCCCATAACTAAGCAGCACAATAACCGACTTAG...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCCTTGTGGAGGTGCGGTaGTCCGGGGAGCTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCLVEVR*SGELVL
Trigger: TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAG...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGCTTCCTTCCCTCCTCTaGTCCCGGCTTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKLPSLL*SRLPSP
Trigger: CGGGCTGGGAAGCCGGGACCAGAGGAGGGAAGGAAG...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGTTGCAGCGCTTGCACTaGAAGTGCTTGAAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLLQRLH*KCLKAE
Trigger: TTCGGCCTTCAAGCACTTCCAGTGCAAGCGCTGCAA...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 72 bp GCCCCAGCTTGGGAGCTGTGCAGGCACCACACCTGGTaGTGTAGGGTGTTTGGATGTGGGCACTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: APAWELCRHHTW*CRVFGCGHCCA
Trigger: TGCACAGCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTCCCAAGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTACGGGACCCTATTGCTTaGAGGGGCCGGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLRDPIA*RGRQGP
Trigger: GGGGCCTTGCCGGCCCCTTCAAGCAATAGGGTCCCG...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAATCAGCGCCCCCTCCCTaGCCCGAGTGCAATCCGTTC +
Preference number: 4 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQSAPPP*PECNPF
Trigger: GAACGGATTGCACTCGGGTCAGGGAGGGGGCGCTGA...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGTCCACGCACAGCTGCTaGGTACATGGGCTCCGGCGA +
Preference number: 4 (lower is better)
Translates to: AHYCSIVGFGLPKREGERSTHSC*VHGLRR
Trigger: TCGCCGGAGCCCATGTACGCAGCAGCTGTGCGTGGA...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGCTCTCCACGCACAGCTaGTGCGTACATGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKLSTHS*CVHGLR
Trigger: CCGGAGCCCATGTACGCAGCAGCTGTGCGTGGAGAG...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGCTCTCCACGCACAGCTaGTGCGTACATGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: AHYCSIVGFGLPKREGERLSTHS*CVHGLR
Trigger: CCGGAGCCCATGTACGCAGCAGCTGTGCGTGGAGAG...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTGCCGTTCTCCCTCGGGACCCTATTaGTTGAAGGGGCCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ECRGHVNLGTWSLCICRSPSGPY*LKGPAR
Trigger: CCTTGCCGGCCCCTTCAAGCAATAGGGTCCCGAGGG...AGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCTCTCGTCGACCCTATTaGTGGGAGAAAGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCSRRPY*WEKAGG
Trigger: GCCCCCGGCTTTCTCCCAGCAATAGGGTCGACGAGA...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCATGCAGTGCGCATTATTaGTCTATAGTCGGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPCSAHY*SIVGFG
Trigger: TCCGAAGCCGACTATAGAGCAATAATGCGCACTGCA...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GGGGTGGGTAGGGCGAGGGGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCGGCGGCAGCTTCGCATaGAGTGCGCATTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: GVGRARGYLILSNSRGGGGGSFA*SAHYCS
Trigger: AGAGCAATAATGCGCACTGCATGCGAAGCTGCCGCC...GCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCCTACCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTACTTGTGGAGGTGCGGTaGTCCGGGGAGCTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLLVEVR*SGELVL
Trigger: TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAG...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTCTTCCTTCCCTCCTCTaGTCCCGGCTTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAILPSLL*SRLPSP
Trigger: CGGGCTGGGAAGCCGGGACCAGAGGAGGGAAGGAAG...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTACGCGGGTCCCCACTCTaGCCTTTGGATGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLRGSPL*PLDAAA
Trigger: CGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCG...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAACAGCTGCTGCGTACATaGGCTCCGGCGACGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQQLLRT*APATAL
Trigger: AAGGGCCGTCGCCGGAGCCCATGTACGCAGCAGCTG...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTACGGCAGCGCCGGCATTaGAAGCCTTACGCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLRQRRH*KPYAAS
Trigger: GCTCGCGGCGTAAGGCTTCCAATGCCGGCGCTGCCG...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCGCCCCTGGCTGGACATaGCAGATGTGTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCAPGWT*QMCVGQ
Trigger: CTGGCCAACACACATCTGCCATGTCCAGCCAGGGGC...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCCTTCTTCTCCAGCCATaGCTCTGCCCCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCLLLQP*LCPWLD
Trigger: GTCCAGCCAGGGGCAGAGCCATGGCTGGAGAAGAAG...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGGGTGGGTCATCCTTGTaGGGGCAGCCACGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKGGSSL*GQPRLL
Trigger: CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACC...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGTCTGTCCGGCCGGCCTaGCCCCAAATGGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: SAHYCSIVGFGLPKREGESVRPA*PQMGAE
Trigger: TTCCGCCCCCATTTGGGGCCAGGCCGGCCGGACAGA...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 72 bp AGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTaGGATGTGGGCACTGCTGTGCAGAGCGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SCAGTTPGCVGC*DVGTAVQSGGS
Trigger: TGACCCACCGCTCTGCACAGCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGACTCTGGCCTTTGGATaGTGCCGCGCGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AHYCSIVGFGLPKREGERTLAFG*CRASGV
Trigger: GACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGT...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTGCCGTTCTAGGTACCCTTTATCGTaGAGTGGCGCGCCGAGGTCG +
Preference number: 4 (lower is better)
Translates to: ECRGHVNLGTWSLCICRSRYPLS*SGAPRS
Trigger: CGACCTCGGCGCGCCACTGCACGATAAAGGGTACCT...AGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAATCCACGCACAGCTGCTaGGTACATGGGCTCCGGCGA +
Preference number: 4 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQSTHSC*VHGLRR
Trigger: TCGCCGGAGCCCATGTACGCAGCAGCTGTGCGTGGA...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTAAGGGGTGGGGCTGCATaGAGTGACGTCACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLRGGAA*SDVTKA
Trigger: CGCCTTTGTGACGTCACTGCATGCAGCCCCACCCCT...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGAGGGGTGGGGCTGCATaGAGTGACGTCACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKRGGAA*SDVTKA
Trigger: CGCCTTTGTGACGTCACTGCATGCAGCCCCACCCCT...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCCCTTTATCGTGCAGTaGCGCGCCGAGGTCGCTGCG +
Preference number: 4 (lower is better)
Translates to: SAHYCSIVGFGLPKREGEPFIVQ*RAEVAA
Trigger: CGCAGCGACCTCGGCGCGCCACTGCACGATAAAGGG...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTTGGCCATGGCCGGCATaGACACGTACACCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIWPWPA*TRTPCR
Trigger: GCGGCAAGGTGTACGTGTCCATGCCGGCCATGGCCA...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GGGGTGGGTAGGGCGAGGGGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCTTGCAGCGCTTGCACTaGAAGTGCTTGAAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: GVGRARGYLILSNSRGGGLQRLH*KCLKAE
Trigger: TTCGGCCTTCAAGCACTTCCAGTGCAAGCGCTGCAA...GCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCCTACCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAACGTCGACCCTATTGCTaGGAGAAAGCCGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQRRPYC*EKAGGT
Trigger: GGTGCCCCCGGCTTTCTCCCAGCAATAGGGTCGACG...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATAAAGGCGGCGGCCAATaGGGCGGGCCCTTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYKGGGQ*GGPLGR
Trigger: CCGCCCCAAGGGCCCGCCCCATTGGCCGCCGCCTTT...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTACCCACCCAAGCCGGTTaGACCCCTGTCCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLPTQAG*TPVLQT
Trigger: TGTTTGCAGGACAGGGGTCCAACCGGCTTGGGTGGG...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTGCCGTTCTCCCACCCAAGCCGGTTaGACCCCTGTCCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: ECRGHVNLGTWSLCICRSPTQAG*TPVLQT
Trigger: TGTTTGCAGGACAGGGGTCCAACCGGCTTGGGTGGG...AGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGAGAGGATCAGAGAAGTaGCCACCTGTGTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKRGSEK*PPVWGP
Trigger: GGGCCCCCACACAGGTGGCCACTTCTCTGATCCTCT...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTGGTGGGTCATCCTTGTaGGGGCAGCCACGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIGGSSL*GQPRLL
Trigger: CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACC...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATCTCCCCCTATTGCTGTaGGGAGGGGCCCGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYLPLLL*GGARPP
Trigger: CGGAGGGCGGGCCCCTCCTCACAGCAATAGGGGGAG...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTACCCTCGGGACCCTATTaGTTGAAGGGGCCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLPSGPY*LKGPAR
Trigger: CCTTGCCGGCCCCTTCAAGCAATAGGGTCCCGAGGG...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGATGTGGGCACTGCTGTaGAGAGCGGTGGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKMWALL*RAVGHP
Trigger: AGGATGACCCACCGCTCTGCACAGCAGTGCCCACAT...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATACTAAGTCGGTTATTGTaGTGCTTAGTTATGGGGGCG +
Preference number: 4 (lower is better)
Translates to: ILVGAATLAAGGEAGHTILSRLL*CLVMGA
Trigger: CGCCCCCATAACTAAGCAGCACAATAACCGACTTAG...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTATGCTGCCGCGCGAGTaGTGTCCTCTCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIMLPRE*CPLSLL
Trigger: CAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCAT...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTATGGCCATGGCCGGCATaGACACGTACACCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLWPWPA*TRTPCR
Trigger: GCGGCAAGGTGTACGTGTCCATGCCGGCCATGGCCA...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTAGTGCCCAGCAGGGACTaGTTGAGGTGGGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLVPSRD*LRWGGV
Trigger: CACTCCTCCCCACCTCAACCAGTCCCTGCTGGGCAC...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAACCATGGCTCTGCCCCTaGCTGGACATGGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQPWLCP*LDMADV
Trigger: CACATCTGCCATGTCCAGCCAGGGGCAGAGCCATGG...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATGGAAGGACCTGGGCATaGTTCCTGCGGGGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYGRTWA*FLRGSG
Trigger: GCCGGAGCCCCGCAGGAATCATGCCCAGGTCCTTCC...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGGACCCAACTCGGAGATaGGGTTCGGTTCTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AHYCSIVGFGLPKREGERDPTRR*GSVLGL
Trigger: GAGACCTAGAACCGAACCTCATCTCCGAGTTGGGTC...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATCCTGGGCATGATTCCTaGGGGGCTCCGGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYPGHDS*GAPALW
Trigger: CCACAGCGCCGGAGCCCCGCAGGAATCATGCCCAGG...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTCAGCGAAGACTTCCCTaGGGGGCCGTATTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIQRRLP*GAVLLR
Trigger: TCTCAGCAATACGGCCCCCCAGGGAAGTCTTCGCTG...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTACCCGGGAAGCTGGGCTaGAAGAATTCGGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLPGKLG*KNSDLA
Trigger: TGCCAAATCCGAATTCTTCCAGCCCAGCTTCCCGGG...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAATCGCCGCCGAGGCTTTaGCATAGACGGGCGAAAGTT +
Preference number: 4 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQSPPRL*HRRAKV
Trigger: AACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGA...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGGTGAACCTAGGGACCTaGTCTCTCTGCATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: AHYCSIVGFGLPKREGERVNLGT*SLCICR
Trigger: ACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCAC...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGTGCTGTGCAGAGCGGTaGGTCATCCTTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SAHYCSIVGFGLPKREGECCAER*VILVGA
Trigger: TGCCCCCACAAGGATGACCCACCGCTCTGCACAGCA...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTGCCGTTCTCATTTATTCTCCTTGTaGAGGTGCGGTGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: ECRGHVNLGTWSLCICRSHLFSL*RCGAPG
Trigger: CCCCGGAGCACCGCACCTCCACAAGGAGAATAAATG...AGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTATTTGGATGTGGGCACTaGTGTGCAGAGCGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLFGCGH*CAERWV
Trigger: GACCCACCGCTCTGCACAGCAGTGCCCACATCCAAA...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTGCCGTTCTTGCAGGCACCACACCTaGTTGTGTAGGGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ECRGHVNLGTWSLCICRSCRHHT*LCRVFG
Trigger: TCCAAACACCCTACACAACCAGGTGTGGTGCCTGCA...AGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTACCGGCCTATTCCGGGTaGGAATATGTACAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLPAYSG*EYVQGG
Trigger: GCCGCCTTGTACATATTCCCACCCGGAATAGGCCGG...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTATGCACTGGAAGTGCTTaGAGGCCGAATGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLCTGSA*RPNASA
Trigger: TGCAGACGCATTCGGCCTTCAAGCACTTCCAGTGCA...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR TCA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTGGGCGAGGGGATACCTaGTTCTCAGTAACTCTAGAG +
Preference number: 4 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIGRGDT*FSVTLE
Trigger: CTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCC...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATCTGGCCTTTGGATGCTaGCGCGCGAGTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYLAFGC*RASGVL
Trigger: GAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAG...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGGCGCGAAGCTCTTCTTaGAGCGCTTGCACTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SAHYCSIVGFGLPKREGEARSSS*SACTGS
Trigger: ACTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGC...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GGGGTGGGTAGGGCGAGGGGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCGGTCGGATAAGTCCATaGGATTCGATATGTGTCATT +
Preference number: 4 (lower is better)
Translates to: GVGRARGYLILSNSRGGGGRISP*DSICVI
Trigger: AATGACACATATCGAATCGCATGGACTTATCCGACC...GCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCCTACCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCTGCAGTGCGCATTATTaGTCTATAGTCGGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCCSAHY*SIVGFG
Trigger: TCCGAAGCCGACTATAGAGCAATAATGCGCACTGCA...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTAGAGCTGGTGCTATTGTaGTTAGGAAGGAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RVAFILLVEVRCSGELVLELVLL*LGRRSV
Trigger: GACAGACCTCCTTCCTAAGCACAATAGCACCAGCTC...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTACAGAGCCCGGGAAGCTaGGCTGGAAGAATTCGGATT +
Preference number: 4 (lower is better)
Translates to: APAPRALLVESVQNRCYLQSPGS*AGRIRI
Trigger: AATCCGAATTCTTCCAGCCCAGCTTCCCGGGCTCTG...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAAGAGCTGGTGCTATTGTaGTTAGGAAGGAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQELVLL*LGRRSV
Trigger: GACAGACCTCCTTCCTAAGCACAATAGCACCAGCTC...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATGCCCCTGGCTGGACATaGCAGATGTGTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYAPGWT*QMCVGQ
Trigger: CTGGCCAACACACATCTGCCATGTCCAGCCAGGGGC...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATCCATGGCTCTGCCCCTaGCTGGACATGGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYPWLCP*LDMADV
Trigger: CACATCTGCCATGTCCAGCCAGGGGCAGAGCCATGG...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGTGCAGGCACCACACCTaGTTGTGTAGGGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SAHYCSIVGFGLPKREGECRHHT*LCRVFG
Trigger: TCCAAACACCCTACACAACCAGGTGTGGTGCCTGCA...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
3UTR CAA 72 bp AAACGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATaGTGCTGCTTAGTTATGGGGGCGGGAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KRSFYLNSLSRL*CCLVMGAGGGP
Trigger: TGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR GCA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGAGTCGGTTATTGTGCTaGTTAGTTATGGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SAHYCSIVGFGLPKREGESRLLC*LVMGAG
Trigger: TCCCGCCCCCATAACTAAGCAGCACAATAACCGACT...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CCA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATGTGAACCTAGGGACCTaGTCTCTCTGCATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYVNLGT*SLCICR
Trigger: ACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCAC...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 90 bp CGGCGCAGACCCTGCAGCCGCCGGACCCAGCTCTCCACGCACAGCTaGTGCGTACATGGGCTCCGGCGACGGCCCTTTGAGCAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: RRRPCSRRTQLSTHS*CVHGLRRRPFEQRS
Trigger: GCTGCGCTGCTCAAAGGGCCGTCGCCGGAGCCCATGTACGCAGCAGCTGTGCGTGGAGAGCTGGGTCCGGCGGCTGCAGGGTCTGCGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTTCCGGCGACGGCCCTTaGAGCAGCGCAGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGSGDGP*SSAASA
Trigger: CGCCGAGGCTGCGCTGCTCAAAGGGCCGTCGCCGGA...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CTCGGGGCGTGGAAAGTAATCCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAGCGGCAGCGCCGGCATaGGAAGCCTTACGCCGCGAG +
Preference number: 5 (lower is better)
Translates to: LGAWKVIPDIPGPRRRRAAAAPA*EALRRE
Trigger: CTCGCGGCGTAAGGCTTCCAATGCCGGCGCTGCCGC...TGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGGATTACTTTCCACGCCCCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 90 bp CGCAGACCCTGCAGCCGCCGGACCCAGCTCTCCACGCACAGCTGCTaGGTACATGGGCTCCGGCGACGGCCCTTTGAGCAGCGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RRPCSRRTQLSTHSC*VHGLRRRPFEQRSL
Trigger: GAGGCTGCGCTGCTCAAAGGGCCGTCGCCGGAGCCCATGTACGCAGCAGCTGTGCGTGGAGAGCTGGGTCCGGCGGCTGCAGGGTCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS TCA 90 bp CTCCACGCACAGCTGCTGCGTACATGGGCTCCGGCGACGGCCCTTTaGGCAGCGCAGCCTCGGCGTCGCCATCGTAGACGGACGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LHAQLLRTWAPATAL*AAQPRRRHRRRTRA
Trigger: GGCCCTCGTCCGTCTACGATGGCGACGCCGAGGCTGCGCTGCTCAAAGGGCCGTCGCCGGAGCCCATGTACGCAGCAGCTGTGCGTGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 90 bp GGAGCGGCGGAGGCAGCGCGGGTCCCCACTCTGGCCTTTGGATGCTaGCGCGCGAGTGGTGTCCTCTCTCCTTGCTGCCCTGCGTCTCCT +
Preference number: 5 (lower is better)
Translates to: GAAEAARVPTLAFGC*RASGVLSPCCPASP
Trigger: AGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCGCTGCCTCCGCCGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 90 bp CGAGGAGCGGCGGAGGCAGCGCGGGTCCCCACTCTGGCCTTTGGATaGTGCCGCGCGAGTGGTGTCCTCTCTCCTTGCTGCCCTGCGTCT +
Preference number: 5 (lower is better)
Translates to: RGAAEAARVPTLAFG*CRASGVLSPCCPAS
Trigger: AGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCGCTGCCTCCGCCGCTCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CCA 90 bp CATCCGAGGAGCGGCGGAGGCAGCGCGGGTCCCCACTCTGGCCTTTaGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: HPRSGGGSAGPHSGL*MLPREWCPLSLLPC
Trigger: GCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCGCTGCCTCCGCCGCTCCTCGGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CCA 90 bp GGCAGCGCGGGTCCCCACTCTGGCCTTTGGATGCTGCCGCGCGAGTaGTGTCCTCTCTCCTTGCTGCCCTGCGTCTCCTCCGTTGCCCCT +
Preference number: 5 (lower is better)
Translates to: GSAGPHSGLWMLPRE*CPLSLLPCVSSVAP
Trigger: AGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CCA 90 bp CCGTCACCATCCGAGGAGCGGCGGAGGCAGCGCGGGTCCCCACTCTaGCCTTTGGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: PSPSEERRRQRGSPL*PLDAAARVVSSLLA
Trigger: AGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCGCTGCCTCCGCCGCTCCTCGGATGGTGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTTCCCCACTCTGGCCTTaGGATGCTGCCGCGCGAGTG +
Preference number: 5 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGSPLWP*DAAARV
Trigger: CACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGA...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCCCCCTCGGGACCCTATaGCTTGAAGGGGCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGPLGTL*LEGAGK
Trigger: CTTGCCGGCCCCTTCAAGCAATAGGGTCCCGAGGGG...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CTCGGGGCGTGGAAAGTAATCCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCACCTGCGCTAGAAGGCTaGGGAAGGGGTGGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LGAWKVIPDIPGPRRRRAPALEG*GRGGED
Trigger: GTCTTCCCCACCCCTTCCCAAGCCTTCTAGCGCAGG...TGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGGATTACTTTCCACGCCCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCCATGGCAGATGTGTGTaGGCCAGAGGATCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPHGRCV*ARGSEK
Trigger: CTTCTCTGATCCTCTGGCCAACACACATCTGCCATG...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATATGGGGGCAGCCACGCTaGCTGCTGGGGGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ILVGAATLAAGGEAGHTIWGQPR*LLGVRL
Trigger: CAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCA...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGCCTGCGTCTCCTCCGTaGCCCCTCCGGATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLPASPP*PLRIPL
Trigger: AAGAGGGATCCGGAGGGGCAACGGAGGAGACGCAGG...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGCCTGCGTCTCCTCCGTaGCCCCTCCGGATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGPASPP*PLRIPL
Trigger: AAGAGGGATCCGGAGGGGCAACGGAGGAGACGCAGG...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGCCCCTCGGGACCCTATaGCTTGAAGGGGCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLPLGTL*LEGAGK
Trigger: CTTGCCGGCCCCTTCAAGCAATAGGGTCCCGAGGGG...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGGTCTCGTCGACCCTATaGCTGGGAGAAAGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGVSSTL*LGESRG
Trigger: CCCCCGGCTTTCTCCCAGCAATAGGGTCGACGAGAC...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGATAGACGGGCGAAAGTaGGCAACCGAGTGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGIDGRK*ATEWGR
Trigger: CCGCCCCCACTCGGTTGCCAACTTTCGCCCGTCTAT...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CTCGGGGCGTGGAAAGTAATCCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAGGTTGTGTAGGGTGTTaGGATGTGGGCACTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LGAWKVIPDIPGPRRRRAGCVGC*DVGTAV
Trigger: CACAGCAGTGCCCACATCCAAACACCCTACACAACC...TGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGGATTACTTTCCACGCCCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCCGGACATCCCAGGCCCCCGGCGTCGGCGGGCAAGATGGGGGTTCAGCGCCCCTCGCTAAGTCGGTTATaGTGCTGCTTAGTTATGGGG +
Preference number: 5 (lower is better)
Translates to: PGHPRPPASAGKMGVQRPSLSRL*CCLVMG
Trigger: CCCCATAACTAAGCAGCACAATAACCGACTTAGCGA...GGGGCGCTGAACCCCCATCTTGCCCGCCGACGCCGGGGGCCTGGGATGTCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 90 bp CTGGCCTTTGGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTTGCTaGCCTGCGTCTCCTCCGTTGCCCCTCCGGATCCCTCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LAFGCCRASGVLSPC*PASPPLPLRIPLLP
Trigger: AGGAAGAAGAGGGATCCGGAGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GAGTGTAGGGGGCATGTGAACCTAGGGACCTGGTCTCTCTGCATCTGCCGTTCTTCCGGCGACGGCCCTTaGAGCAGCGCAGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: ECRGHVNLGTWSLCICRSSGDGP*SSAASA
Trigger: CGCCGAGGCTGCGCTGCTCAAAGGGCCGTCGCCGGA...AGAACGGCAGATGCAGAGAGACCAGGTCCCTAGGTTCACATGCCCCCTACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATACCTGCGCTAGAAGGCTaGGGAAGGGGTGGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: ILVGAATLAAGGEAGHTIPALEG*GRGGED
Trigger: GTCTTCCCCACCCCTTCCCAAGCCTTCTAGCGCAGG...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTTGGCGGACTCAGCAATaGGCCTGGCACATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGWRTQQ*AWHIVG
Trigger: ACCTACTATGTGCCAGGCCAATTGCTGAGTCCGCCA...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTGGTTGTGTAGGGTGTTaGGATGTGGGCACTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGGCVGC*DVGTAV
Trigger: CACAGCAGTGCCCACATCCAAACACCCTACACAACC...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTGGGGAGCTGGTGCTATaGTGCTTAGGAAGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISGELVL*CLGRRS
Trigger: AGACCTCCTTCCTAAGCACAATAGCACCAGCTCCCC...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 90 bp CTTTGGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTTGCTGCCCTaGGTCTCCTCCGTTGCCCCTCCGGATCCCTCTTCTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LWMLPREWCPLSLLP*VSSVAPPDPSSSSF
Trigger: GAAGGAGGAAGAAGAGGGATCCGGAGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 90 bp ACTCTGGCCTTTGGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTTaGTGCCCTGCGTCTCCTCCGTTGCCCCTCCGGATCCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: TLAFGCCRASGVLSP*CPASPPLPLRIPLL
Trigger: AAGAAGAGGGATCCGGAGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGGCGGCAGCGCCGGCATaGGAAGCCTTACGCCGCGAG +
Preference number: 5 (lower is better)
Translates to: AHYCSIVGFGLPKREGERAAAPA*EALRRE
Trigger: CTCGCGGCGTAAGGCTTCCAATGCCGGCGCTGCCGC...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTCTCTTCTTGCAGCGCTaGCACTGGAAGTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGLFLQR*HWKCLK
Trigger: CTTCAAGCACTTCCAGTGCAAGCGCTGCAAGAAGAG...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCAGGCCTGCCTGCCGGCCCCGGGAATCCGTCCTCCAACACGAATGCCTGGGGTTGGAAGAATTCGGATTaGGCAGAGGATGCGAGGCGA +
Preference number: 5 (lower is better)
Translates to: PGLPAGPGNPSSNTNAWGWKNSD*AEDARR
Trigger: TCGCCTCGCATCCTCTGCCAAATCCGAATTCTTCCA...ACCCCAGGCATTCGTGTTGGAGGACGGATTCCCGGGGCCGGCAGGCAGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGGGTGGGTAGGGCGAGGGGATACCTGATTCTCAGTAACTCTAGAGGCGGCGGCATAGACGGGCGAAAGTaGGCAACCGAGTGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: GVGRARGYLILSNSRGGGIDGRK*ATEWGR
Trigger: CCGCCCCCACTCGGTTGCCAACTTTCGCCCGTCTAT...GCCGCCGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTCGCCCTACCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCGCAGCCCCCACCCGAGGGCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTAGGCACCACACCTGGTaGTGTAGGGTGTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: PQPPPEGPRTSGPTCRISRHHTW*CRVFGC
Trigger: ACATCCAAACACCCTACACAACCAGGTGTGGTGCCT...ACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGCCCTCGGGTGGGGGCTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGTTGCACTGGAAGTGCTaGAAGGCCGAATGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLLHWKC*KAECVC
Trigger: GCAGACGCATTCGGCCTTCAAGCACTTCCAGTGCAA...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCACTCTTCTTGCAGCGCTaGCACTGGAAGTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPLFLQR*HWKCLK
Trigger: CTTCAAGCACTTCCAGTGCAAGCGCTGCAAGAAGAG...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp ATCCTTGTGGGGGCAGCCACGCTTGCTGCTGGGGGTGAGGCTGGCCACACCATAAGCGCGAAGCTCTTCTaGCAGCGCTTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: ILVGAATLAAGGEAGHTISAKLF*QRLHWK
Trigger: CTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGCT...TATGGTGTGGCCAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCACAAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GTGCGTGTGCATGCGGCACAGGTGGGCAGGCCCCAGCTTGGGAGCTGTGCAGGCATGCAGTGCGCATTATaGCTCTATAGTCGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: VRVHAAQVGRPQLGSCAGMQCAL*LYSRLR
Trigger: CCGAAGCCGACTATAGAGCAATAATGCGCACTGCAT...GCCTGCACAGCTCCCAAGCTGGGGCCTGCCCACCTGTGCCGCATGCACACGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGGTCGCCGCCGAGGCTTTGGCATAGACGGGCGAAAGTTGGCAACCGAGTGGGGTGGCGGACTCAGCAATaGGCCTGGCACATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: GSPPRLWHRRAKVGNRVGWRTQQ*AWHIVG
Trigger: ACCTACTATGTGCCAGGCCAATTGCTGAGTCCGCCA...CCCCACTCGGTTGCCAACTTTCGCCCGTCTATGCCAAAGCCTCGGCGGCGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTTGGGGGCAGCCACGCTaGCTGCTGGGGGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIWGQPR*LLGVRL
Trigger: CAGCCTCACCCCCAGCAGCAAGCGTGGCTGCCCCCA...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGGGGGAGCTGGTGCTATaGTGCTTAGGAAGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLGELVL*CLGRRS
Trigger: AGACCTCCTTCCTAAGCACAATAGCACCAGCTCCCC...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp AGAGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATCCCCACTCTGGCCTTaGGATGCTGCCGCGCGAGTG +
Preference number: 5 (lower is better)
Translates to: RVAFILLVEVRCSGELVLSPLWP*DAAARV
Trigger: CACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGA...TAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GAGCTGTGCAGGCACCACACCTGGTTGTGTAGGGTGTTTGGATGTGGGCACTGCGTCTCGTCGACCCTATaGCTGGGAGAAAGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: ELCRHHTWLCRVFGCGHCVSSTL*LGESRG
Trigger: CCCCCGGCTTTCTCCCAGCAATAGGGTCGACGAGAC...GCAGTGCCCACATCCAAACACCCTACACAACCAGGTGTGGTGCCTGCACAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGCGGAGCGGTGGGTCATCCTaGTGGGGGCAGCCACGCTTG +
Preference number: 5 (lower is better)
Translates to: AHYCSIVGFGLPKREGERSGGSS*WGQPRL
Trigger: CAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCT...CCGCTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGCACTGCTGTGCAGAGCGGTGGGTCATCCTTGTGGGGGCAGCCACGCTTGCTGGAGAACGCGTCAAGTTaGACCTTCTTGACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GTAVQSGGSSLWGQPRLLENASS*TFLTRK
Trigger: CTTCCTGGTCAAGAAGGTCAAACTTGACGCGTTCTC...CAGCAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCTCTGCACAGCAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GGCTCCCAGCTAGGGGCGGGCCTCGGGGCGTGGAAAGTAATCCCGGACATCCCATCGCTAAGTCGGTTATaGTGCTGCTTAGTTATGGGG +
Preference number: 5 (lower is better)
Translates to: GSQLGAGLGAWKVIPDIPSLSRL*CCLVMG
Trigger: CCCCATAACTAAGCAGCACAATAACCGACTTAGCGA...TGGGATGTCCGGGATTACTTTCCACGCCCCGAGGCCCGCCCCTAGCTGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp GCCCCCGCACCTCGGGCCCTACTTGTAGAATCAGTACAAAATAGGTGCTACCTAAGCGGTGGGTCATCCTaGTGGGGGCAGCCACGCTTG +
Preference number: 5 (lower is better)
Translates to: APAPRALLVESVQNRCYLSGGSS*WGQPRL
Trigger: CAAGCGTGGCTGCCCCCACAAGGATGACCCACCGCT...TAGGTAGCACCTATTTTGTACTGATTCTACAAGTAGGGCCCGAGGTGCGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGAGCGCGAAGCTCTTCTaGCAGCGCTTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKSAKLF*QRLHWK
Trigger: CTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGCT...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp CCAGGAGCCCTGGATCTGTCCCCCTCAGCTGGAGTCAAAAGGCCTAACTCAAAGAGGCACCACACCTGGTaGTGTAGGGTGTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: PGALDLSPSAGVKRPNSKRHHTW*CRVFGC
Trigger: ACATCCAAACACCCTACACAACCAGGTGTGGTGCCT...CTTTGAGTTAGGCCTTTTGACTCCAGCTGAGGGGGACAGATCCAGGGCTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp AGTGGCATTTATTCTCCTTGTGGAGGTGCGGTGCTCCGGGGAGCTGGTGCTATTTGGCATTTATTCTCCTaGTGGAGGTGCGGTGCTCCG +
Preference number: 5 (lower is better)
Translates to: SGIYSPCGGAVLRGAGAIWHLFS*WRCGAP
Trigger: CGGAGCACCGCACCTCCACAAGGAGAATAAATGCCA...AATAGCACCAGCTCCCCGGAGCACCGCACCTCCACAAGGAGAATAAATGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp AGTGCGCATTATTGCTCTATAGTCGGCTTCGGACTACCTAAGAGGGAGGGGGAGTGGAAGAATTCGGATTaGGCAGAGGATGCGAGGCGA +
Preference number: 5 (lower is better)
Translates to: SAHYCSIVGFGLPKREGEWKNSD*AEDARR
Trigger: TCGCCTCGCATCCTCTGCCAAATCCGAATTCTTCCA...CTCCCCCTCCCTCTTAGGTAGTCCGAAGCCGACTATAGAGCAATAATGCGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp AGGGGCACGGCCCGAGTAAAAATCCCGGCCTATTCCGGGTGGGAATATGTACAAATGCAGTGCGCATTATaGCTCTATAGTCGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: RGTARVKIPAYSGWEYVQMQCAL*LYSRLR
Trigger: CCGAAGCCGACTATAGAGCAATAATGCGCACTGCAT...TTGTACATATTCCCACCCGGAATAGGCCGGGATTTTTACTCGGGCCGTGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATTTGCACTGGAAGTGCTaGAAGGCCGAATGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYLHWKC*KAECVC
Trigger: GCAGACGCATTCGGCCTTCAAGCACTTCCAGTGCAA...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS-3UTR CAA 90 bp AAGCGGGGTCTGAGGAGGTCGGATAAGTCCATGCGATTCGATATGTGTCATTATCATGGCAGATGTGTGTaGGCCAGAGGATCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: KRGLRRSDKSMRFDMCHYHGRCV*ARGSEK
Trigger: CTTCTCTGATCCTCTGGCCAACACACATCTGCCATG...ATAATGACACATATCGAATCGCATGGACTTATCCGACCTCCTCAGACCCCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CCA 72 bp CTCCGGCGTCGCCGTCGGGGGCCGCCGCCGAGGCTGTaGAGGGAGCGGCGGCAGCGCCGGCATTGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: LRRRRRGPPPRL*RERRQRRHWKP
Trigger: AGGCTTCCAATGCCGGCGCTGCCGCCGCTCCCTCCACAGCCTCGGCGGCGGCCCCCGACGGCGACGCCGGAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 72 bp GGTACCCTTTATCGTGCAGTGGCGCGCCGAGGTCGCTaGGGGCGCGTCCGTAGGCGCTCTCCAGGTCGGCCG +
Preference number: 6 (lower is better)
Translates to: GTLYRAVARRGR*GRVRRRSPGRP
Trigger: CGGCCGACCTGGAGAGCGCCTACGGACGCGCCCGCAGCGACCTCGGCGCGCCACTGCACGATAAAGGGTACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 72 bp CCCTGCAGCCGCCGGACCCAGCTCTCCACGCACAGCTaGTGCGTACATGGGCTCCGGCGACGGCCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: PCSRRTQLSTHS*CVHGLRRRPFE
Trigger: CTCAAAGGGCCGTCGCCGGAGCCCATGTACGCAGCAGCTGTGCGTGGAGAGCTGGGTCCGGCGGCTGCAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CAA 90 bp CCATCCGAGGAGCGGCGGAGGCAGCGCGGGTCCCCACTCTGGCCTTaGGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTTGCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: PSEERRRQRGSPLWP*DAAARVVSSLLAAL
Trigger: CAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCGCTGCCTCCGCCGCTCCTCGGATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS TCA 72 bp CAGCTGCTGCGTACATGGGCTCCGGCGACGGCCCTTTaGGCAGCGCAGCCTCGGCGTCGCCATCGTAGACGG +
Preference number: 6 (lower is better)
Translates to: QLLRTWAPATAL*AAQPRRRHRRR
Trigger: CCGTCTACGATGGCGACGCCGAGGCTGCGCTGCTCAAAGGGCCGTCGCCGGAGCCCATGTACGCAGCAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 72 bp GCGGAGGCAGCGCGGGTCCCCACTCTGGCCTTTGGATaGTGCCGCGCGAGTGGTGTCCTCTCTCCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: AEAARVPTLAFG*CRASGVLSPCC
Trigger: GCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCGCTGCCTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 72 bp TGCAGCCGCCGGACCCAGCTCTCCACGCACAGCTGCTaGGTACATGGGCTCCGGCGACGGCCCTTTGAGCAG +
Preference number: 6 (lower is better)
Translates to: CSRRTQLSTHSC*VHGLRRRPFEQ
Trigger: CTGCTCAAAGGGCCGTCGCCGGAGCCCATGTACGCAGCAGCTGTGCGTGGAGAGCTGGGTCCGGCGGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CAA 72 bp GAGCGGCGGAGGCAGCGCGGGTCCCCACTCTGGCCTTaGGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: ERRRQRGSPLWP*DAAARVVSSLL
Trigger: AAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGACCCGCGCTGCCTCCGCCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 72 bp GGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTTGCTaGCCTGCGTCTCCTCCGTTGCCCCTCCGGATCCCT +
Preference number: 6 (lower is better)
Translates to: GCCRASGVLSPC*PASPPLPLRIP
Trigger: AGGGATCCGGAGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CCA 72 bp GGTCCCCACTCTGGCCTTTGGATGCTGCCGCGCGAGTaGTGTCCTCTCTCCTTGCTGCCCTGCGTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GPHSGLWMLPRE*CPLSLLPCVSS
Trigger: GGAGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS GCA 72 bp TTTGGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTTaGTGCCCTGCGTCTCCTCCGTTGCCCCTCCGGATC +
Preference number: 6 (lower is better)
Translates to: FGCCRASGVLSP*CPASPPLPLRI
Trigger: GATCCGGAGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CAA 72 bp CTTTGGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTaGCTGCCCTGCGTCTCCTCCGTTGCCCCTCCGGAT +
Preference number: 6 (lower is better)
Translates to: LWMLPREWCPLS*LPCVSSVAPPD
Trigger: ATCCGGAGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CAA 90 bp CACTCTGGCCTTTGGATGCTGCCGCGCGAGTGGTGTCCTCTCTCCTaGCTGCCCTGCGTCTCCTCCGTTGCCCCTCCGGATCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: HSGLWMLPREWCPLS*LPCVSSVAPPDPSS
Trigger: AGAAGAGGGATCCGGAGGGGCAACGGAGGAGACGCAGGGCAGCAAGGAGAGAGGACACCACTCGCGCGGCAGCATCCAAAGGCCAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2
CDS CAA 72 bp GCGCTCTCCAGGTCGGCCGAAGAGAACGCGTCAAGTTaGACCTTCTTGACCAGGAAGGACCTGGGCATGATT +
Preference number: 6 (lower is better)
Translates to: ALSRSAEENASS*TFLTRKDLGMI
Trigger: AATCATGCCCAGGTCCTTCCTGGTCAAGAAGGTCAAACTTGACGCGTTCTCTTCGGCCGACCTGGAGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569446.3
ENST00000645782.2