Pregenerated sensors for SCRN3 (Homo sapiens)
Ensembl gene IDs: ENSG00000144306Ensembl transcript IDs: ENST00000272732.11, ENST00000409673.7, ENST00000424069.5, ENST00000427038.5, ENST00000435964.1, ENST00000437944.5, ENST00000458563.5, ENST00000475928.1, ENST00000488349.1, ENST00000490927.5, ENST00000548031.1, ENST00000548868.5, ENST00000548921.5, ENST00000549848.5
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTACCATCCCACCAACCTTTCCGCTTAGCATAGTTTCTCATGTCTaGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGTTGATTAGA | + |
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Preference number: 1 (lower is better) Translates to: FTIPPTFPLSIVSHV*VFPGNLGCYGKLIR Trigger: TCTAATCAACTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATGAGAAACTATGCTAAGCGGAAAGGTTGGTGGGATGGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR CCA 90 bp | GAAGCTTGTAGCCCTCACAGTATCTGCCTGATGAAGTCATCATCTTaGCTGTGTCAAGATAGGAATATGCTGCAGCAAAATCAAACTCCT | + |
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Preference number: 1 (lower is better) Translates to: EACSPHSICLMKSSS*LCQDRNMLQQNQTP Trigger: AGGAGTTTGATTTTGCTGCAGCATATTCCTATCTTGACACAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCTACAAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR GCA 90 bp | TATTTCCTTTGTGCTTATTTAGAAGCTTGTAGCCCTCACAGTATCTaGCTGATGAAGTCATCATCTTGGCTGTGTCAAGATAGGAATATG | + |
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Preference number: 1 (lower is better) Translates to: YFLCAYLEACSPHSI*LMKSSSWLCQDRNM Trigger: CATATTCCTATCTTGACACAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCTACAAGCTTCTAAATAAGCACAAAGGAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR TCA 90 bp | AATGCAAGTACATCACCTGAAATAACACCTGTATCCCACGATACATaGATCCAATTCCAATGCTGTTTTCTTTCTATTTCAGCAACACTA | + |
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Preference number: 1 (lower is better) Translates to: NASTSPEITPVSHDT*IQFQCCFLSISATL Trigger: TAGTGTTGCTGAAATAGAAAGAAAACAGCATTGGAATTGGATTCATGTATCGTGGGATACAGGTGTTATTTCAGGTGATGTACTTGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272732.11 ENST00000409673.7 ENST00000548868.5 |
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| 3UTR CCA 90 bp | CATGCTTGCAGTGGTCAGGAATTCTCCCTCCATATTAATGCCACTTaGTTTATCTCGAAGAATTTCCATCATTGTTTCAAAAGTTATATT | + |
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Preference number: 1 (lower is better) Translates to: HACSGQEFSLHINAT*FISKNFHHCFKSYI Trigger: AATATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACCACTGCAAGCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR CCA 90 bp | GCTTGTAGCCCTCACAGTATCTGCCTGATGAAGTCATCATCTTGGCTGTGTCAAGTTCCCGGGCAATCTTaGTTGTTATGGAAAGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: ACSPHSICLMKSSSWLCQVPGQS*LLWKVD Trigger: ATCAACTTTCCATAACAACCAAGATTGCCCGGGAAC...TTGACACAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCTACAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTCAGGCTTAAAGGAAGGCTGGAGTCTTaGGGTAAAATAGAAACCATG | + |
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Preference number: 2 (lower is better) Translates to: FQCLLMFLVEWVSSVRLKGRLES*GKIETM Trigger: CATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCC...TTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR TCA 90 bp | CTCATTATTATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGGTCCCTGTAAAGAAGTaGATGCAAGGAAGGCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LIIIYYFQCLLMFLVEWVVPVKK*MQGRLE Trigger: CTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGAC...CACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR GCA 90 bp | TTAGAAGCTTGTAGCCCTCACAGTATCTGCCTGATGAAGTCATCATCTTGGCTGGTCAAGATAGGAATATaGTGCAGCAAAATCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: LEACSPHSICLMKSSSWLVKIGI*CSKIKL Trigger: GAGTTTGATTTTGCTGCAGCATATTCCTATCTTGAC...CAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCTACAAGCTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR TCA 90 bp | CTCATTATTATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGGGAAGGCTGGAGTCTTaGGGTAAAATAGAAACCATG | + |
|
Preference number: 2 (lower is better) Translates to: LIIIYYFQCLLMFLVEWVGRLES*GKIETM Trigger: CATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCC...CACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR GCA 90 bp | GGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCACAAATATGAAAGGCTTAAGCCCTCACAGTATCTaGCTGATGAAGTCATCATCT | + |
|
Preference number: 2 (lower is better) Translates to: GELVSNSCEICGTNMKGLSPHSI*LMKSSS Trigger: AGATGATGACTTCATCAGGCAGATACTGTGAGGGCT...TAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTTCAAATGTTGGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCACAATAGTTTCTCATGTCTaGGTGTTCCCGGGCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: SSSNVGELVSNSCEICGTIVSHV*VFPGNL Trigger: AAGATTGCCCGGGAACACCCAGACATGAGAAACTAT...TGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR CCA 90 bp | GGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCACAAATATGAAAGGCTTAATAGTTTCTCATGTCTaGGTGTTCCCGGGCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: GELVSNSCEICGTNMKGLIVSHV*VFPGNL Trigger: AAGATTGCCCGGGAACACCCAGACATGAGAAACTAT...TAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR CCA 90 bp | CTCATTATTATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGGTTCCCGGGCAATCTTaGTTGTTATGGAAAGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LIIIYYFQCLLMFLVEWVVPGQS*LLWKVD Trigger: ATCAACTTTCCATAACAACCAAGATTGCCCGGGAAC...CACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR CCA 90 bp | TATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTATGAAGTCATCATCTTaGCTGTGTCAAGATAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: YLLLPMPVDVFGRVGVFCMKSSS*LCQDRN Trigger: ATTCCTATCTTGACACAGCCAAGATGATGACTTCAT...ACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR GCA 90 bp | CTCATTATTATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGGTCAAGATAGGAATATaGTGCAGCAAAATCAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: LIIIYYFQCLLMFLVEWVVKIGI*CSKIKL Trigger: GAGTTTGATTTTGCTGCAGCATATTCCTATCTTGAC...CACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR CCA 72 bp | CCACCAACCTTTCCGCTTAGCATAGTTTCTCATGTCTaGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PPTFPLSIVSHV*VFPGNLGCYGK Trigger: CTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATGAGAAACTATGCTAAGCGGAAAGGTTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR CCA 72 bp | AGCCCTCACAGTATCTGCCTGATGAAGTCATCATCTTaGCTGTGTCAAGATAGGAATATGCTGCAGCAAAAT | + |
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Preference number: 3 (lower is better) Translates to: SPHSICLMKSSS*LCQDRNMLQQN Trigger: ATTTTGCTGCAGCATATTCCTATCTTGACACAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR GCA 72 bp | TGTGCTTATTTAGAAGCTTGTAGCCCTCACAGTATCTaGCTGATGAAGTCATCATCTTGGCTGTGTCAAGAT | + |
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Preference number: 3 (lower is better) Translates to: CAYLEACSPHSI*LMKSSSWLCQD Trigger: ATCTTGACACAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCTACAAGCTTCTAAATAAGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR-3UTR CAA 90 bp | TATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTCTTCAAGTTCAAATGTaGGTGAACTGGTATCCAATA | + |
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Preference number: 3 (lower is better) Translates to: YLLLPMPVDVFGRVGVFCLQVQM*VNWYPI Trigger: TATTGGATACCAGTTCACCAACATTTGAACTTGAAG...ACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR CCA 72 bp | AGTGGTCAGGAATTCTCCCTCCATATTAATGCCACTTaGTTTATCTCGAAGAATTTCCATCATTGTTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SGQEFSLHINAT*FISKNFHHCFK Trigger: TTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACCACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| 3UTR GCA 72 bp | TTTGGCTTTTTCCTCATTATTATTTACTACTTCCAATaGCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: FGFFLIIIYYFQ*LLMFLVEWVSS Trigger: AGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAAAAAGCCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | ATCCCACCAACCTTTCCGCTTAGCATAGTTTCTCATGTCTGGGTGTTCCCGGGCGGGAGGAGTGGCCAGTaGAGGCATCAGTTGCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: IPPTFPLSIVSHVWVFPGGRSGQ*RHQLPE Trigger: TTCCGGCAACTGATGCCTCCACTGGCCACTCCTCCC...GCCCGGGAACACCCAGACATGAGAAACTATGCTAAGCGGAAAGGTTGGTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR TCA 90 bp | AGATCTCTCAGGATCAGGAGTCCCTGTAAAGAAGTGAATGCAAGGAAGGCTGGACCCAGCTACCCGAAGTaGCAGGTGGACGGAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RSLRIRSPCKEVNARKAGPSYPK*QVDGGR Trigger: CCTCCCTCCGTCCACCTGTCACTTCGGGTAGCTGGG...TCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAGAGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR TCA 90 bp | GCTTGTAGCCCTCACAGTATCTGCCTGATGAAGTCATCATCTTGGCTGTGTCAACCCAGCTACCCGAAGTaGCAGGTGGACGGAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ACSPHSICLMKSSSWLCQPSYPK*QVDGGR Trigger: CCTCCCTCCGTCCACCTGTCACTTCGGGTAGCTGGG...TTGACACAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCTACAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | AGCATAGTTTCTCATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGCCCCCACAACCACGCTaGGCGACTCAGGACAACAGC | + |
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Preference number: 4 (lower is better) Translates to: SIVSHVWVFPGNLGCYGKPPQPR*ATQDNS Trigger: GCTGTTGTCCTGAGTCGCCCAGCGTGGTTGTGGGGG...CTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATGAGAAACTATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | TTTACCATCCCACCAACCTTTCCGCTTAGCATAGTTTCTCATGTCTGGGTGTTCGGGAGGAGTGGCCAGTaGAGGCATCAGTTGCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: FTIPPTFPLSIVSHVWVFGRSGQ*RHQLPE Trigger: TTCCGGCAACTGATGCCTCCACTGGCCACTCCTCCC...GAACACCCAGACATGAGAAACTATGCTAAGCGGAAAGGTTGGTGGGATGGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR GCA 90 bp | TTAGAAGCTTGTAGCCCTCACAGTATCTGCCTGATGAAGTCATCATCTTGGCTGAGTGGAGGCATCAGTTaGCGGAAGCTGTCACCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LEACSPHSICLMKSSSWLSGGIS*RKLSPL Trigger: CAAAGGTGACAGCTTCCGGCAACTGATGCCTCCACT...CAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCTACAAGCTTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | ATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTCGGACGGAGGGAGGAGTaGCCAGTGGAGGCATCAGTT | + |
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Preference number: 4 (lower is better) Translates to: IYYFQCLLMFLVEWVSSVGRREE*PVEASV Trigger: AACTGATGCCTCCACTGGCCACTCCTCCCTCCGTCC...GACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR TCA 90 bp | AGCATAGTTTCTCATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGGTCCCTGTAAAGAAGTaGATGCAAGGAAGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SIVSHVWVFPGNLGCYGKVPVKK*MQGRLE Trigger: CTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGAC...CTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATGAGAAACTATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | TATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTGGACGGAGGGAGGAGTaGCCAGTGGAGGCATCAGTT | + |
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Preference number: 4 (lower is better) Translates to: YLLLPMPVDVFGRVGVFCGRREE*PVEASV Trigger: AACTGATGCCTCCACTGGCCACTCCTCCCTCCGTCC...ACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR GCA 90 bp | CATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGTTGATTAGAAATAGTGGAGGCATCAGTTaGCGGAAGCTGTCACCTTTG | + |
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Preference number: 4 (lower is better) Translates to: HVWVFPGNLGCYGKLIRNSGGIS*RKLSPL Trigger: CAAAGGTGACAGCTTCCGGCAACTGATGCCTCCACT...ATTTCTAATCAACTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR GCA 90 bp | CATCTTGGCTGTGTCAAGATAGGAATATGCTGCAGCAAAATCAAACTCCTTTTTATTGGCTCCCATTTCTaGCCCCCACAACCACGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HLGCVKIGICCSKIKLLFIGSHF*PPQPRW Trigger: CCAGCGTGGTTGTGGGGGGCAGAAATGGGAGCCAAT...AAAAAGGAGTTTGATTTTGCTGCAGCATATTCCTATCTTGACACAGCCAAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR TCA 90 bp | AGCATAGTTTCTCATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGGGAAGGCTGGAGTCTTaGGGTAAAATAGAAACCATG | + |
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Preference number: 4 (lower is better) Translates to: SIVSHVWVFPGNLGCYGKGRLES*GKIETM Trigger: CATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCC...CTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATGAGAAACTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR GCA 90 bp | CTTCAAGTTCAAATGTTGGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCAATTGGCTCCCATTTCTaGCCCCCACAACCACGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LQVQMLVNWYPIVVKYVAIGSHF*PPQPRW Trigger: CCAGCGTGGTTGTGGGGGGCAGAAATGGGAGCCAAT...TGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR GCA 90 bp | TTTACCATCCCACCAACCTTTCCGCTTAGCATAGTTTCTCATGTCTGGGTGTTCAGCCCTCACAGTATCTaGCTGATGAAGTCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: FTIPPTFPLSIVSHVWVFSPHSI*LMKSSS Trigger: AGATGATGACTTCATCAGGCAGATACTGTGAGGGCT...GAACACCCAGACATGAGAAACTATGCTAAGCGGAAAGGTTGGTGGGATGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | TTAGAAGCTTGTAGCCCTCACAGTATCTGCCTGATGAAGTCATCATCTTGGCTGGTTCCCGGGCAATCTTaGTTGTTATGGAAAGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LEACSPHSICLMKSSSWLVPGQS*LLWKVD Trigger: ATCAACTTTCCATAACAACCAAGATTGCCCGGGAAC...CAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCTACAAGCTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | GAAACCATGCTTGCAGTGGTCAGGAATTCTCCCTCCATATTAATGCCACTTGGTGTTCCCGGGCAATCTTaGTTGTTATGGAAAGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: ETMLAVVRNSPSILMPLGVPGQS*LLWKVD Trigger: ATCAACTTTCCATAACAACCAAGATTGCCCGGGAAC...ACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACCACTGCAAGCATGGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR GCA 90 bp | TTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTCAGGCTTAAAAGCCCTCACAGTATCTaGCTGATGAAGTCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: FQCLLMFLVEWVSSVRLKSPHSI*LMKSSS Trigger: AGATGATGACTTCATCAGGCAGATACTGTGAGGGCT...TTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | CATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGTTGATTAGAAATATAGTTTCTCATGTCTaGGTGTTCCCGGGCAATCTT | + |
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Preference number: 4 (lower is better) Translates to: HVWVFPGNLGCYGKLIRNIVSHV*VFPGNL Trigger: AAGATTGCCCGGGAACACCCAGACATGAGAAACTAT...ATTTCTAATCAACTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR TCA 90 bp | CATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGTTGATTAGAAATGTATCCCACGATACATaGATCCAATTCCAATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HVWVFPGNLGCYGKLIRNVSHDT*IQFQCC Trigger: ACAGCATTGGAATTGGATTCATGTATCGTGGGATAC...ATTTCTAATCAACTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | ATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTCATAGTTTCTCATGTCTaGGTGTTCCCGGGCAATCTT | + |
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Preference number: 4 (lower is better) Translates to: IYYFQCLLMFLVEWVSSVIVSHV*VFPGNL Trigger: AAGATTGCCCGGGAACACCCAGACATGAGAAACTAT...GACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | TATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTAAACCATGCTTGCAGTaGTCAGGAATTCTCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YLLLPMPVDVFGRVGVFCKPCLQ*SGILPP Trigger: TGGAGGGAGAATTCCTGACCACTGCAAGCATGGTTT...ACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR CCA 90 bp | CTTCAAGTTCAAATGTTGGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCAAAACCATGCTTGCAGTaGTCAGGAATTCTCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LQVQMLVNWYPIVVKYVAKPCLQ*SGILPP Trigger: TGGAGGGAGAATTCCTGACCACTGCAAGCATGGTTT...TGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
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| CDS-3UTR TCA 90 bp | TCAAGTTCAAATGTTGGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCACAGGAAGGCTGGAGTCTTaGGGTAAAATAGAAACCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSSNVGELVSNSCEICGTGRLES*GKIETM Trigger: CATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCC...TGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR TCA 90 bp | CATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGTTGATTAGAAATTCAAGATGCTTGTTTTaGAGGATTGATTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HVWVFPGNLGCYGKLIRNSRCLF*RIDSIS Trigger: AGAGATGGAATCAATCCTTCAAAACAAGCATCTTGA...ATTTCTAATCAACTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR CCA 90 bp | TTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTCAGGCTTAAAATGAAGTCATCATCTTaGCTGTGTCAAGATAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FQCLLMFLVEWVSSVRLKMKSSS*LCQDRN Trigger: ATTCCTATCTTGACACAGCCAAGATGATGACTTCAT...TTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR CCA 90 bp | CATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGTTGATTAGAAATATGAAGTCATCATCTTaGCTGTGTCAAGATAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HVWVFPGNLGCYGKLIRNMKSSS*LCQDRN Trigger: ATTCCTATCTTGACACAGCCAAGATGATGACTTCAT...ATTTCTAATCAACTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| 3UTR CAA 72 bp | ATAATCAGAGCTACAAGCTCACTGGTTAGCCAAGTCTaGACAAAGAGCATGTTTGAGTTTAACAAAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIRATSSLVSQV*TKSMFEFNKSA Trigger: TGCACTTTTGTTAAACTCAAACATGCTCTTTGTCAAGACTTGGCTAACCAGTGAGCTTGTAGCTCTGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272732.11 |
||
| CDS-3UTR TCA 90 bp | TATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCTTCTGTTCAAGATGCTTGTTTTaGAGGATTGATTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLLLPMPVDVFGRVGVFCSRCLF*RIDSIS Trigger: AGAGATGGAATCAATCCTTCAAAACAAGCATCTTGA...ACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR TCA 90 bp | TCAAGTTCAAATGTTGGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCACATTGATTCCATCTCTCTaGATAGTTCTTTCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSNVGELVSNSCEICGTLIPSL*IVLSPV Trigger: AACTGGAGAAAGAACTATTCAGAGAGATGGAATCAA...TGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR TCA 90 bp | GGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCACAAATATGAAAGGCTTATTGATTCCATCTCTCTaGATAGTTCTTTCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GELVSNSCEICGTNMKGLLIPSL*IVLSPV Trigger: AACTGGAGAAAGAACTATTCAGAGAGATGGAATCAA...TAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR CCA 90 bp | CATCTTGGCTGTGTCAAGATAGGAATATGCTGCAGCAAAATCAAACTCCTTTTTCAAATGTTGGTGAACTaGTATCCAATAGTTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLGCVKIGICCSKIKLLFQMLVN*YPIVVK Trigger: TTTCACAACTATTGGATACCAGTTCACCAACATTTG...AAAAAGGAGTTTGATTTTGCTGCAGCATATTCCTATCTTGACACAGCCAAGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR CCA 90 bp | TCAAGTTCAAATGTTGGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCACACAAATGTTGGTGAACTaGTATCCAATAGTTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSNVGELVSNSCEICGTQMLVN*YPIVVK Trigger: TTTCACAACTATTGGATACCAGTTCACCAACATTTG...TGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS GCA 90 bp | ACCGCAGCCGGTGCAGCTGGGCTCCGGAGCCCCTCGGTCAAGCAGTaGCGCGCCACAGTTGGGTCTTCCGGGTTTCTGTCTCAACTATGC | + |
|
Preference number: 5 (lower is better) Translates to: TAAGAAGLRSPSVKQ*RATVGSSGFLSQLC Trigger: GCATAGTTGAGACAGAAACCCGGAAGACCCAACTGTGGCGCGGCACTGCTTGACCGAGGGGCTCCGGAGCCCAGCTGCACCGGCTGCGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000424069.5 ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS CCA 90 bp | AGTCAGAGTCCACAGAAAGTAATGGGCTCGAGCTTCAAGCACCTTTaGTCGAAGGGCCGCCGCGGTCCACCCCGCACCCCGGCCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQSPQKVMGSSFKHL*SKGRRGPPRTPALG Trigger: GCCCAGGGCCGGGGTGCGGGGTGGACCGCGGCGGCCCTTCGACCAAAGGTGCTTGAAGCTCGAGCCCATTACTTTCTGTGGACTCTGACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS TCA 90 bp | GGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCGGTCTaGGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSYAHGISLIASTAV*DQTARRQRGWGRGT Trigger: GGTGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACCGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548921.5 |
||
| CDS CCA 90 bp | TTTCTATATATGTACACTGGCCTCCCAGCTACCCGAAGTGACAGGTaGACGGAGGGAGGAGTGGCCAGTGGAGGCATCAGTTGCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLYMYTGLPATRSDR*TEGGVASGGISCRK Trigger: CTTCCGGCAACTGATGCCTCCACTGGCCACTCCTCCCTCCGTCCACCTGTCACTTCGGGTAGCTGGGAGGCCAGTGTACATATATAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490927.5 |
||
| CDS TCA 90 bp | CAGCTCTGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGAGGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLWSTAPSVSDAEEG*FLHFHLRYRVHLTR Trigger: CCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCCTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCAGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000475928.1 ENST00000549848.5 |
||
| CDS GCA 90 bp | CCAGTACCGTACAGCTGGGTACAAAATAGACAGGGCCTCCGTTCTTaGAGAGCTGTCTGTCATTCTATTTCACGCGCTCTTAGTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVPYSWVQNRQGLRS*RAVCHSISRALSSA Trigger: GGCTGAACTAAGAGCGCGTGAAATAGAATGACAGACAGCTCTGCAAGAACGGAGGCCCTGTCTATTTTGTACCCAGCTGTACGGTACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435964.1 ENST00000488349.1 |
||
| CDS TCA 90 bp | AACCACGCTGGGCGACTCAGGACAACAGCATATGTTTCAGGAACTTaGTCAATTTCTATATATGTACACTGGCCTCCCAGCTACCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NHAGRLRTTAYVSGT*SISIYVHWPPSYPK Trigger: CTTCGGGTAGCTGGGAGGCCAGTGTACATATATAGAAATTGATCAAGTTCCTGAAACATATGCTGTTGTCCTGAGTCGCCCAGCGTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490927.5 |
||
| CDS-3UTR CAA 90 bp | GAAACCATGCTTGCAGTGGTCAGGAATTCTCCCTCCATATTAATGCCACTTGGTTCCTGTTATCGACTGTaGCTGGAGGTAATGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: ETMLAVVRNSPSILMPLGSCYRL*LEVMPR Trigger: TCGTGGCATTACCTCCAGCAACAGTCGATAACAGGA...ACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACCACTGCAAGCATGGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS GCA 90 bp | TTTTTAACGTACAGCTGGGTACAAAATAGACAGGGCCTCCGTTCTTaGAGAGCTGTCTGTCATTCTATTTCACGCGCTCTTAGTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLTYSWVQNRQGLRS*RAVCHSISRALSSA Trigger: GGCTGAACTAAGAGCGCGTGAAATAGAATGACAGACAGCTCTGCAAGAACGGAGGCCCTGTCTATTTTGTACCCAGCTGTACGTTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427038.5 |
||
| CDS CCA 90 bp | CACGCGCTCTTAGTTCAGCCGGCGCTTTCAGAAACATCATATTGTTaGATTCTCGCAAGCATACTACGGTTAGGGCCGGAATTATTATCT | + |
|
Preference number: 5 (lower is better) Translates to: HALLVQPALSETSYC*ILASILRLGPELLS Trigger: AGATAATAATTCCGGCCCTAACCGTAGTATGCTTGCGAGAATCCAACAATATGATGTTTCTGAAAGCGCCGGCTGAACTAAGAGCGCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS-3UTR CAA 90 bp | CATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGTTGATTAGAAATTGCCTGTTGATGTTTTaGGTAGAGTGGGTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HVWVFPGNLGCYGKLIRNCLLMF*VEWVSS Trigger: AGAAGACACCCACTCTACCAAAAACATCAACAGGCA...ATTTCTAATCAACTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS TCA 90 bp | AACCACGCTGGGCGACTCAGGACAACAGCATATGTTTCAGGAACTTaGTCAATTTCTATATATGTACACTTAAGACGTTCTCCCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: NHAGRLRTTAYVSGT*SISIYVHLRRSPRL Trigger: TAACCTGGGAGAACGTCTTAAGTGTACATATATAGAAATTGATCAAGTTCCTGAAACATATGCTGTTGTCCTGAGTCGCCCAGCGTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000272732.11 ENST00000409673.7 ENST00000424069.5 ENST00000427038.5 ENST00000437944.5 ENST00000458563.5 ENST00000548031.1 ENST00000548868.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGTTCAAATGTTGGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCACATCCTGTTATCGACTGTaGCTGGAGGTAATGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSNVGELVSNSCEICGTSCYRL*LEVMPR Trigger: TCGTGGCATTACCTCCAGCAACAGTCGATAACAGGA...TGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR CAA 90 bp | AACCATGCTTGCAGTGGTCAGGAATTCTCCCTCCATATTAATGCCACTTGGTTTCTTCAAGTTCAAATGTaGGTGAACTGGTATCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: NHACSGQEFSLHINATWFLQVQM*VNWYPI Trigger: TATTGGATACCAGTTCACCAACATTTGAACTTGAAG...AAACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACCACTGCAAGCATGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR CAA 90 bp | CATGTCTGGGTGTTCCCGGGCAATCTTGGTTGTTATGGAAAGTTGATTAGAAATTCCAGTTTCCTCATGTaGTCCAACATTATTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVWVFPGNLGCYGKLIRNSSFLM*SNIILA Trigger: AGCCAAAATAATGTTGGACAACATGAGGAAACTGGA...ATTTCTAATCAACTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR CAA 90 bp | CTCATTATTATTTACTACTTCCAATGCCTGTTGATGTTTTTGGTAGAGTGGGTGTCCAGTTTCCTCATGTaGTCCAACATTATTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LIIIYYFQCLLMFLVEWVSSFLM*SNIILA Trigger: AGCCAAAATAATGTTGGACAACATGAGGAAACTGGA...CACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGTTCAAATGTTGGTGAACTGGTATCCAATAGTTGTGAAATATGTGGCACTTCAAGTTCAAATGTaGGTGAACTGGTATCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LQVQMLVNWYPIVVKYVALQVQM*VNWYPI Trigger: TATTGGATACCAGTTCACCAACATTTGAACTTGAAG...TGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437944.5 ENST00000548868.5 |
||
| CDS CCA 72 bp | CCCGGCCCTGGGCGCTCAAACCGCAGCCGGTGCAGCTaGGCTCCGGAGCCCCTCGGTCAAGCAGTGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PGPGRSNRSRCS*APEPLGQAVPR Trigger: GCGCGGCACTGCTTGACCGAGGGGCTCCGGAGCCCAGCTGCACCGGCTGCGGTTTGAGCGCCCAGGGCCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000424069.5 ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS CAA 72 bp | GCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATaGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ARTVREPKQGEA*PHLGSARGQGV Trigger: AACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549848.5 |
||
| CDS CAA 90 bp | CAGCTGGGCTCCGGAGCCCCTCGGTCAAGCAGTGCCGCGCCACAGTaGGGTCTTCCGGGTTTCTGTCTCAACTATGCACGCCCCTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QLGSGAPRSSSAAPQ*GLPGFCLNYARPSP Trigger: GGGGGAGGGGCGTGCATAGTTGAGACAGAAACCCGGAAGACCCAACTGTGGCGCGGCACTGCTTGACCGAGGGGCTCCGGAGCCCAGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000424069.5 ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS CAA 90 bp | GAGTCAGAGTCCACAGAAAGTAATGGGCTCGAGCTTCAAGCACCTTaGGTCGAAGGGCCGCCGCGGTCCACCCCGCACCCCGGCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ESESTESNGLELQAP*VEGPPRSTPHPGPG Trigger: CCCAGGGCCGGGGTGCGGGGTGGACCGCGGCGGCCCTTCGACCAAAGGTGCTTGAAGCTCGAGCCCATTACTTTCTGTGGACTCTGACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS CCA 72 bp | CCACAGAAAGTAATGGGCTCGAGCTTCAAGCACCTTTaGTCGAAGGGCCGCCGCGGTCCACCCCGCACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PQKVMGSSFKHL*SKGRRGPPRTP Trigger: CGGGGTGCGGGGTGGACCGCGGCGGCCCTTCGACCAAAGGTGCTTGAAGCTCGAGCCCATTACTTTCTGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS CAA 72 bp | TCCACAGAAAGTAATGGGCTCGAGCTTCAAGCACCTTaGGTCGAAGGGCCGCCGCGGTCCACCCCGCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: STESNGLELQAP*VEGPPRSTPHP Trigger: GGGGTGCGGGGTGGACCGCGGCGGCCCTTCGACCAAAGGTGCTTGAAGCTCGAGCCCATTACTTTCTGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS CAA 72 bp | TCCGGAGCCCCTCGGTCAAGCAGTGCCGCGCCACAGTaGGGTCTTCCGGGTTTCTGTCTCAACTATGCACGC | + |
|
Preference number: 6 (lower is better) Translates to: SGAPRSSSAAPQ*GLPGFCLNYAR Trigger: GCGTGCATAGTTGAGACAGAAACCCGGAAGACCCAACTGTGGCGCGGCACTGCTTGACCGAGGGGCTCCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000424069.5 ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS TCA 72 bp | CCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTaGTTGCTAGCACAGCGGTCTGAGATCAAACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PGSEGPTPTESR*LLAQRSEIKLQ Trigger: TTGCAGTTTGATCTCAGACCGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548921.5 |
||
| CDS TCA 72 bp | CCGAATAGGAACAGCTCTGGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGAGGGGTGATTTCTGCATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PNRNSSGLQLPA*ATQKRGDFCIS Trigger: GGAAATGCAGAAATCACCCCTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCAGAGCTGTTCCTATTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000475928.1 ENST00000549848.5 |
||
| CDS TCA 72 bp | GCGACGCAGAAGAGGGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCATCTCACTAGGGAGTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ATQKRGDFCISI*GTGFISLGSAR Trigger: TCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCCTCTTCTGCGTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000475928.1 ENST00000549848.5 |
||
| CDS TCA 72 bp | TCTACAGCTCCCAGCGTGAGCGACGCAGAAGAGGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: STAPSVSDAEEG*FLHFHLRYRVH Trigger: ATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCCTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000475928.1 ENST00000549848.5 |
||
| CDS GCA 72 bp | TACAGCTGGGTACAAAATAGACAGGGCCTCCGTTCTTaGAGAGCTGTCTGTCATTCTATTTCACGCGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YSWVQNRQGLRS*RAVCHSISRAL Trigger: AAGAGCGCGTGAAATAGAATGACAGACAGCTCTGCAAGAACGGAGGCCCTGTCTATTTTGTACCCAGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS CAA 90 bp | TCACGCGCTCTTAGTTCAGCCGGCGCTTTCAGAAACATCATATTGTaGGATTCTCGCAAGCATACTACGGTTAGGGCCGGAATTATTATC | + |
|
Preference number: 6 (lower is better) Translates to: SRALSSAGAFRNIIL*DSRKHTTVRAGIII Trigger: GATAATAATTCCGGCCCTAACCGTAGTATGCTTGCGAGAATCCAACAATATGATGTTTCTGAAAGCGCCGGCTGAACTAAGAGCGCGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS CAA 90 bp | ATTTCACGCGCTCTTAGTTCAGCCGGCGCTTTCAGAAACATCATATaGTTGGATTCTCGCAAGCATACTACGGTTAGGGCCGGAATTATT | + |
|
Preference number: 6 (lower is better) Translates to: ISRALSSAGAFRNII*LDSRKHTTVRAGII Trigger: AATAATTCCGGCCCTAACCGTAGTATGCTTGCGAGAATCCAACAATATGATGTTTCTGAAAGCGCCGGCTGAACTAAGAGCGCGTGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427038.5 ENST00000435964.1 ENST00000488349.1 |
||
| CDS CAA 90 bp | CAACCACGCTGGGCGACTCAGGACAACAGCATATGTTTCAGGAACTaGATCAATTTCTATATATGTACACTTAAGACGTTCTCCCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QPRWATQDNSICFRN*INFYICTLKTFSQV Trigger: AACCTGGGAGAACGTCTTAAGTGTACATATATAGAAATTGATCAAGTTCCTGAAACATATGCTGTTGTCCTGAGTCGCCCAGCGTGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000272732.11 ENST00000409673.7 ENST00000424069.5 ENST00000427038.5 ENST00000437944.5 ENST00000458563.5 ENST00000548031.1 ENST00000548868.5 |
||
| CDS CAA 90 bp | TATTTTGCAACTCCTAACGCGTATTCGTCATTCAATAAGTATTTATaGAACGTCTTTCGGCGCCAGTACCGTACAGCTGGGTACAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: YFATPNAYSSFNKYL*NVFRRQYRTAGYKI Trigger: TATTTTGTACCCAGCTGTACGGTACTGGCGCCGAAAGACGTTCAATAAATACTTATTGAATGACGAATACGCGTTAGGAGTTGCAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488349.1 |
||
| CDS CAA 90 bp | TTTTTAACAACTCCTAACGCGTATTCGTCATTCAATAAGTATTTATaGAACGTCTTTCGGCGCCAGTACCGTACAGCTGGGTACAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: FLTTPNAYSSFNKYL*NVFRRQYRTAGYKI Trigger: TATTTTGTACCCAGCTGTACGGTACTGGCGCCGAAAGACGTTCAATAAATACTTATTGAATGACGAATACGCGTTAGGAGTTGTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435964.1 |
||
| CDS CCA 72 bp | CTAAATACCATTCTACCCTCTGTGCAATTTCCACCCTaGCCATATTTTTCTAGTAAGTCAACAATGACATTG | + |
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Preference number: 6 (lower is better) Translates to: LNTILPSVQFPP*PYFSSKSTMTL Trigger: CAATGTCATTGTTGACTTACTAGAAAAATATGGCCAGGGTGGAAATTGCACAGAGGGTAGAATGGTATTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000272732.11 ENST00000409673.7 ENST00000458563.5 ENST00000490927.5 ENST00000548031.1 |
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