RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133028

Ensembl transcript IDs: ENST00000255390.10, ENST00000577335.2, ENST00000577427.1, ENST00000579396.1, ENST00000582053.1

Found 507 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCTGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTaGCCGCTGGAGCCTGTGGGTCTCTTTCCTGAGAACTGTGTGCAG +
Preference number: 1 (lower is better)
Translates to: ALGLGNCTSASVPPT*PLEPVGLFPENCVQ
Trigger: CTGCACACAGTTCTCAGGAAAGAGACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR TCA 90 bp TCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTaGGGCCCACTCTCCTACCATCTGCCTCCTGCTGTTGCTGAAGCT +
Preference number: 1 (lower is better)
Translates to: SLGPKCGYSALPHHT*GPLSYHLPPAVAEA
Trigger: AGCTTCAGCAACAGCAGGAGGCAGATGGTAGGAGAGTGGGCCTCAGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 90 bp GGTCCTCACGAAACCTTGGTGGCCAAGGCCCTTGGTATGACCTCTTaGGACCAGGAGGCTCTCACAGGCATCTACAGAGCTCAGCCTTGG +
Preference number: 1 (lower is better)
Translates to: GPHETLVAKALGMTS*DQEALTGIYRAQPW
Trigger: CCAAGGCTGAGCTCTGTAGATGCCTGTGAGAGCCTCCTGGTCTCAAGAGGTCATACCAAGGGCCTTGGCCACCAAGGTTTCGTGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 90 bp CATCATACTGCAGATTCAGTGAATTCAGCTCTGGGTCTGGGGAACTaGACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTG +
Preference number: 1 (lower is better)
Translates to: HHTADSVNSALGLGN*TSASVPPTCPLEPV
Trigger: CACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCAGAGCTGAATTCACTGAATCTGCAGTATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR GCA 90 bp ACGGGGCTGAGGCTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTaGCCTGCTTCGGGCACTGAACGCTTGCCTGTCTCCGTTAGGAAT +
Preference number: 1 (lower is better)
Translates to: TGLRLVQGKVSHTKA*PASGTERLPVSVRN
Trigger: ATTCCTAACGGAGACAGGCAAGCGTTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAGCCTCAGCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 90 bp CCACACCTGAGGCCCACTCTCCTACCATCTGCCTCCTGCTGTTGCTaGAGCTTGCTGACACTTTCTCCACGCTGTCTTCTTTCAGGCCTT +
Preference number: 1 (lower is better)
Translates to: PHLRPTLLPSASCCC*SLLTLSPRCLLSGL
Trigger: AAGGCCTGAAAGAAGACAGCGTGGAGAAAGTGTCAGCAAGCTTCAGCAACAGCAGGAGGCAGATGGTAGGAGAGTGGGCCTCAGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 90 bp CCACCTGCCCGCTGGAGCCTGTGGGTCTCTTTCCTGAGAACTGTGTaGAGCCATCTATGTACCCACTCATCACCCATGAAAAAGATCACG +
Preference number: 1 (lower is better)
Translates to: PPARWSLWVSFLRTV*SHLCTHSSPMKKIT
Trigger: CGTGATCTTTTTCATGGGTGATGAGTGGGTACATAGATGGCTGCACACAGTTCTCAGGAAAGAGACCCACAGGCTCCAGCGGGCAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR CCA 90 bp ATTGATTTCCTGCCCCTTCAACTGAGGGTGAGAAGACACTGTCTCTaGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTGAG +
Preference number: 1 (lower is better)
Translates to: IDFLPLQLRVRRHCL*GLSVATLLCHTTPE
Trigger: CTCAGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCTTCTCACCCTCAGTTGAAGGGGCAGGAAATCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 90 bp GGCTCTCACAGGCATCTACAGAGCTCAGCCTTGGCCCCTTACCTTTaGATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAACTGCA +
Preference number: 1 (lower is better)
Translates to: GSHRHLQSSALAPYL*IILEWKKDHGLPTA
Trigger: TGCAGTTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCAAGGCTGAGCTCTGTAGATGCCTGTGAGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CCA 90 bp ATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATaGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGC +
Preference number: 1 (lower is better)
Translates to: MVPVRQHPSHLGYLS*KQVSASYCRFSEFS
Trigger: GCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR CCA 90 bp CACTTTCTTAAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTaGGGTATCTGTCATGGAAGCAGGTCTCTGCATCATACTGCAGAT +
Preference number: 1 (lower is better)
Translates to: HFLKGWSQSASIRVT*GICHGSRSLHHTAD
Trigger: ATCTGCAGTATGATGCAGAGACCTGCTTCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTTAAGAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR TCA 90 bp CCTCAGTGTCAGGGTCCCAGGGCCCTAGAAGTCTCTAAAAGCCACTaGGCAAACTTCTTTGCCTCTCAAAGCTGTGGCAACTTTAGGTCC +
Preference number: 1 (lower is better)
Translates to: PQCQGPRALEVSKSH*ANFFASQSCGNFRS
Trigger: GGACCTAAAGTTGCCACAGCTTTGAGAGGCAAAGAAGTTTGCTCAGTGGCTTTTAGAGACTTCTAGGGCCCTGGGACCCTGACACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 90 bp AGGCTTGGCGGGGAGGGTTGTCTTTCCCTAGGGTTGTGTCTTCCTTaGACTGGGTGCAAACATGGACAAAGTCACATGTATGACATGGAG +
Preference number: 1 (lower is better)
Translates to: RLGGEGCLSLGLCLP*TGCKHGQSHMYDME
Trigger: CTCCATGTCATACATGTGACTTTGTCCATGTTTGCACCCAGTTCAAGGAAGACACAACCCTAGGGAAAGACAACCCTCCCCGCCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 90 bp AATGTTGACGTCGTCAATCAATCAGTGAATGACTGTCTTGTGCTGTaGTCCCGCACGTTCCCGACAGGGCTTTCTGAATGTACGGGGCTG +
Preference number: 1 (lower is better)
Translates to: NVDVVNQSVNDCLVL*SRTFPTGLSECTGL
Trigger: CAGCCCCGTACATTCAGAAAGCCCTGTCGGGAACGTGCGGGATCACAGCACAAGACAGTCATTCACTGATTGATTGACGACGTCAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CCA 90 bp GGATCACGGGCTGCCAACTGCAGACCCACCCAGGAATACTTCAGATaGCTCAAACACAGTGGTAATGTCCCTGGCTTACTCCATCAAAAT +
Preference number: 1 (lower is better)
Translates to: GSRAANCRPTQEYFR*LKHSGNVPGLLHQN
Trigger: ATTTTGATGGAGTAAGCCAGGGACATTACCACTGTGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCGTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 90 bp CCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTaGCAACTGCAGACCCACCCAGGAATACTTCAGATGGCTCAAACA +
Preference number: 1 (lower is better)
Translates to: PLTFASSLNGKRITG*QLQTHPGILQMAQT
Trigger: TGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CCA 90 bp AACCTGAATAACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTaGCGGGGAGGGTTGTCTTTCCCTAGGGTTGTGTCTTCCTTGAAC +
Preference number: 1 (lower is better)
Translates to: NLNNATLCLRMGREA*RGGLSFPRVVSSLN
Trigger: GTTCAAGGAAGACACAACCCTAGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTTATTCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 90 bp GCTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTaGGAGCTGTCCAATGCATTCTCCACATCACAGACTTGCTTTCTT +
Preference number: 1 (lower is better)
Translates to: AGISFYLSAQATANC*ELSNAFSTSQTCFL
Trigger: AAGAAAGCAAGTCTGTGATGTGGAGAATGCATTGGACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 90 bp TTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTCCAATaGATTCTCCACATCACAGACTTGCTTTCTTTCAAGACTGCCTTT +
Preference number: 1 (lower is better)
Translates to: LSLCPSYSKLLRAVQ*ILHITDLLSFKTAF
Trigger: AAAGGCAGTCTTGAAAGAAAGCAAGTCTGTGATGTGGAGAATGCATTGGACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 90 bp TTAATATGTTTTTATGTATGTAAATCATCACCCAGATCAAGCTACTaGACATTTCAATGGCTCTGGAAGCTCTCCTGGCACCCCCTTCTG +
Preference number: 1 (lower is better)
Translates to: LICFYVCKSSPRSSY*TFQWLWKLSWHPLL
Trigger: CAGAAGGGGGTGCCAGGAGAGCTTCCAGAGCCATTGAAATGTTCAGTAGCTTGATCTGGGTGATGATTTACATACATAAAAACATATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CCA 90 bp TTGAACGCAAGGGTAACATCCCCATCCAAAACAGAAATGTTCTCATaGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTTTATAT +
Preference number: 1 (lower is better)
Translates to: LNARVTSPSKTEMFS*YEGHSVECTYICLY
Trigger: ATATAAACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGTTTTGGATGGGGATGTTACCCTTGCGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR CCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGCAGGCAGGAATGCACTaGCTGTGCCTCGCCCCGCCA +
Preference number: 2 (lower is better)
Translates to: VWGTALQQASHPPARWSLQAGMH*LCLAPP
Trigger: TGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTG...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCAGGCGGCAAAGCTGCTaGGAGGGCCTGTTCGCAGGC +
Preference number: 2 (lower is better)
Translates to: GTALQQASHPPARWSLWVRRQSC*EGLFAG
Trigger: GCCTGCGAACAGGCCCTCCCAGCAGCTTTGCCGCCT...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR GCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCAGAGAGGCGGCAAAGCTaGTGGGAGGGCCTGTTCGCA +
Preference number: 2 (lower is better)
Translates to: GCASPRHVLPQVGSSLASERRQS*WEGLFA
Trigger: TGCGAACAGGCCCTCCCAGCAGCTTTGCCGCCTCTC...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR TCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCTCCATTTCAGTCTCCTaGGTAGCCAGGACTACAGGC +
Preference number: 2 (lower is better)
Translates to: GTALQQASHPPARWSLWVSISVS*VARTTG
Trigger: GCCTGTAGTCCTGGCTACTCAGGAGACTGAAATGGA...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGATGTCCTTCCACAGGTaGGCTCTTCACTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: VWGTALQQASHPPARWSLMSFHR*ALHWLH
Trigger: GTGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACAT...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR TCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCTTACGCTCCCCAGTATaGGTTGTGAGGGAAAACGGT +
Preference number: 2 (lower is better)
Translates to: GTALQQASHPPARWSLWVLRSPV*VVRENG
Trigger: ACCGTTTTCCCTCACAACTCATACTGGGGAGCGTAA...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR-3UTR CCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCAGGTGGGCTCTTCACTaGCTTCACTTCAGCTTGATC +
Preference number: 2 (lower is better)
Translates to: GTALQQASHPPARWSLWVRWALH*LHFSLI
Trigger: GATCAAGCTGAAGTGAAGCCAGTGAAGAGCCCACCT...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR TCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGCCCACTCATCACCCATaGAAAAGATCACGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: VWGTALQQASHPPARWSLPTHHP*KRSRLS
Trigger: AGACAAGCGTGATCTTTTTCATGGGTGATGAGTGGG...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR TCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCGTGATTATAGCTCACTaGAGCCTTGAATTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: GTALQQASHPPARWSLWVVIIAH*SLEFLG
Trigger: GCCCAGGAATTCAAGGCTTCAGTGAGCTATAATCAC...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR GCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCTTCCTGAGAACTGTGTaGAGCCATCTATGTACCCAC +
Preference number: 2 (lower is better)
Translates to: WVWGTALQQASHPPARWSFLRTV*SHLCTH
Trigger: GTGGGTACATAGATGGCTGCACACAGTTCTCAGGAA...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAAAGGGCCCAAGACGATaGAGAGGCGGCAAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: KGWSQSASIRVTWGICHGKGPRR*RGGKAA
Trigger: AGCAGCTTTGCCGCCTCTCCATCGTCTTGGGCCCTT...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR GCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAGGAATGCACTGGCTGTaGCTCGCCCCGCCATGTCCT +
Preference number: 2 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQGMHWL*LAPPCP
Trigger: AGGACATGGCGGGGCGAGGCACAGCCAGTGCATTCC...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR GCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAGTTCGCAGGCAGGAATaGACTGGCTGTGCCTCGCCC +
Preference number: 2 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQVRRQE*TGCASP
Trigger: GGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAAC...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR GCA 90 bp AGACACTGTCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTAGGCATGAGCCACCGTaGCCAGCCAACTGTGGTTGT +
Preference number: 2 (lower is better)
Translates to: RHCLWGLSVATLLCHTTPRHEPP*PANCGC
Trigger: ACAACCACAGTTGGCTGGGCACGGTGGCTCATGCCT...AGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGGAAGCCTTGAATTCCTaGGCTCAAGTGATACTCCAT +
Preference number: 2 (lower is better)
Translates to: VWGTALQQASHPPARWSLEALNS*AQVILH
Trigger: ATGGAGTATCACTTGAGCCCAGGAATTCAAGGCTTC...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR CAA 90 bp AGGTCCTCACGAAACCTTGGTGGCCAAGGCCCTTGGTATGACCTCTaGAGACCAGGAGGCTCTCACAGGCATCTACAGAGCTCAGCCTTG +
Preference number: 2 (lower is better)
Translates to: RSSRNLGGQGPWYDL*RPGGSHRHLQSSAL
Trigger: CAAGGCTGAGCTCTGTAGATGCCTGTGAGAGCCTCCTGGTCTCAAGAGGTCATACCAAGGGCCTTGGCCACCAAGGTTTCGTGAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCAATGTTCTCATGGTATaGAGGCCATTCTGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: GTALQQASHPPARWSLWVNVLMV*RPFCRV
Trigger: CACTCTACAGAATGGCCTTCATACCATGAGAACATT...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR TCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCAATGTTCTCATGGTATaGAGGCCATTCTGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGNVLMV*RPFCRV
Trigger: CACTCTACAGAATGGCCTTCATACCATGAGAACATT...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR TCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCATTCAAGCATCAACTCTaGATGGCAGAGACCCTAATC +
Preference number: 2 (lower is better)
Translates to: GCASPRHVLPQVGSSLASFKHQL*MAETLI
Trigger: GATTAGGGTCTCTGCCATTCAGAGTTGATGCTTGAA...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR CAA 90 bp CACACCACACCTGAGGCCCACTCTCCTACCATCTGCCTCCTGCTGTaGCTGAAGCTTGCTGACACTTTCTCCACGCTGTCTTCTTTCAGG +
Preference number: 2 (lower is better)
Translates to: HTTPEAHSPTICLLL*LKLADTFSTLSSFR
Trigger: CCTGAAAGAAGACAGCGTGGAGAAAGTGTCAGCAAGCTTCAGCAACAGCAGGAGGCAGATGGTAGGAGAGTGGGCCTCAGGTGTGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCGTACAATCCAGTATATaGAGAAAGGTACTCAGCATC +
Preference number: 2 (lower is better)
Translates to: WVWGTALQQASHPPARWSVQSSI*RKVLSI
Trigger: GATGCTGAGTACCTTTCTGCATATACTGGATTGTAC...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGAGGCGGCAAAGCTGCTaGGAGGGCCTGTTCGCAGGC +
Preference number: 2 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGRRQSC*EGLFAG
Trigger: GCCTGCGAACAGGCCCTCCCAGCAGCTTTGCCGCCT...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR TCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAGCAGAGACCCTAATCTaGCTGTTATTAGCCACCAAG +
Preference number: 2 (lower is better)
Translates to: KGWSQSASIRVTWGICHGAETLI*LLLATK
Trigger: CTTGGTGGCTAATAACAGTCAGATTAGGGTCTCTGC...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR TCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCAACTTAGTTGATACATaGAGGCCAAGTTCAAATCCT +
Preference number: 2 (lower is better)
Translates to: GTALQQASHPPARWSLWVNLVDT*RPSSNP
Trigger: AGGATTTGAACTTGGCCTTCATGTATCAACTAAGTT...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR-3UTR GCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCATTAGCAAGAGAATACTaGATCCAGCAACACTGCTTT +
Preference number: 2 (lower is better)
Translates to: GCASPRHVLPQVGSSLASLAREY*IQQHCF
Trigger: AAAGCAGTGTTGCTGGATGCAGTATTCTCTTGCTAA...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR GCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGGTTCGCAGGCAGGAATaGACTGGCTGTGCCTCGCCC +
Preference number: 2 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGVRRQE*TGCASP
Trigger: GGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAAC...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR GCA 90 bp ACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGGAGGGTTGTCTTTCCCTACGATGGCGCAATCTTaGCTCACTGCCACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: TLCLRMGREAWRGGLSFPTMAQS*LTATSA
Trigger: GGCAGAGGTGGCAGTGAGGCAAGATTGCGCCATCGT...AGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAACCTTGCAGGGCTCTCTaGCCCACTTTCTTCTGTAAC +
Preference number: 2 (lower is better)
Translates to: LVQGKVSHTKACPASGTEPCRAL*PTFFCN
Trigger: GTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGG...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAACCCCAAGTAAAGGCTTaGCGATGTGTCGCTGCCGTT +
Preference number: 2 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQPQVKA*RCVAAV
Trigger: AACGGCAGCGACACATCGGCAAGCCTTTACTTGGGG...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR-3UTR GCA 90 bp CGGGCTGCCAACTGCAGACCCACCCAGGAATACTTCAGATGGCTCAAACACAGTTTGGGACCCGAGTTTTaGGCCTTAATTCTCCGAGAC +
Preference number: 2 (lower is better)
Translates to: RAANCRPTQEYFRWLKHSLGPEF*ALILRD
Trigger: GTCTCGGAGAATTAAGGCGCAAAACTCGGGTCCCAA...ACTGTGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp AGACACTGTCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTGCTCGCATGGGTGACTaGTCTTTTAAAGGTAGCTCA +
Preference number: 2 (lower is better)
Translates to: RHCLWGLSVATLLCHTTPARMGD*SFKGSS
Trigger: TGAGCTACCTTTAAAAGAGCAGTCACCCATGCGAGC...AGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp TCCAACCTGAATAACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGTGATCTCGGCTCACTaGAACCTCCGCCTCCCAGAT +
Preference number: 2 (lower is better)
Translates to: SNLNNATLCLRMGREAWRVISAH*NLRLPD
Trigger: ATCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCAC...CCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTTATTCAGGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTCACCCACCTGCCCGCTaGAGCCTGTGGGTCTCTTTC +
Preference number: 2 (lower is better)
Translates to: LALAFISLPKLQQIAESCHPPAR*SLWVSF
Trigger: GAAAGAGACCCACAGGCTCCAGCGGGCAGGTGGGTG...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAAAGAAGACACTGTCTCTaGGGCCTAAGTGTGGCTACT +
Preference number: 2 (lower is better)
Translates to: LVQGKVSHTKACPASGTERRHCL*GLSVAT
Trigger: AGTAGCCACACTTAGGCCCCAGAGACAGTGTCTTCT...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 90 bp TTACTCCATCAAAATGCAGTGAGCATCATCAGAGTGGTCCGGAGCTaGACTGACAACGACCAGCTGCTGCTCACCACAGCAGCCAACAAG +
Preference number: 2 (lower is better)
Translates to: LLHQNAVSIIRVVRS*TDNDQLLLTTAANK
Trigger: CTTGTTGGCTGCTGTGGTGAGCAGCAGCTGGTCGTTGTCAGTCAAGCTCCGGACCACTCTGATGATGCTCACTGCATTTTGATGGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCGCATTCCAGCCTGCGTaGGAAGAGCGAGACTCCATC +
Preference number: 2 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISAFQPA*EERDSI
Trigger: GATGGAGTCTCGCTCTTCTCACGCAGGCTGGAATGC...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp CGGGCTGCCAACTGCAGACCCACCCAGGAATACTTCAGATGGCTCAAACACAGTGCTACAGCAAATTGCTaGGAGCTGTCCAATGCATTC +
Preference number: 2 (lower is better)
Translates to: RAANCRPTQEYFRWLKHSATANC*ELSNAF
Trigger: GAATGCATTGGACAGCTCTCAGCAATTTGCTGTAGC...ACTGTGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAATTGCCCAGGCTGGAATaGAGTGGTGTGATTATAGCT +
Preference number: 2 (lower is better)
Translates to: LVQGKVSHTKACPASGTELPRLE*SGVIIA
Trigger: AGCTATAATCACACCACTGCATTCCAGCCTGGGCAA...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCCCTCACTGCCACCTCTaGCTCCTGGGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISPHCHL*LLGSSD
Trigger: ATCGCTTGAACCCAGGAGGCAGAGGTGGCAGTGAGG...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp CGGGCTGCCAACTGCAGACCCACCCAGGAATACTTCAGATGGCTCAAACACAGTAACCTACCTAGAAATTaGGACCCGAGTTTTGCGCCT +
Preference number: 2 (lower is better)
Translates to: RAANCRPTQEYFRWLKHSNLPRN*DPSFAP
Trigger: AGGCGCAAAACTCGGGTCCCAATTTCTAGGTAGGTT...ACTGTGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAATGGCCTCATGTGTGTaGCAATTGAAGCAGCTATTT +
Preference number: 2 (lower is better)
Translates to: KGWSQSASIRVTWGICHGMASCV*QLKQLF
Trigger: AAATAGCTGCTTCAATTGCCACACACATGAGGCCAT...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR CAA 90 bp CTCTTGAGACCAGGAGGCTCTCACAGGCATCTACAGAGCTCAGCCTaGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCAC +
Preference number: 2 (lower is better)
Translates to: LLRPGGSHRHLQSSA*APYLCIILEWKKDH
Trigger: GTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCAAGGCTGAGCTCTGTAGATGCCTGTGAGAGCCTCCTGGTCTCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGATCAGCATCACACTCGTaGTCAATATCCTCTTATTTC +
Preference number: 2 (lower is better)
Translates to: KGWSQSASIRVTWGICHGSASHS*SISSYF
Trigger: GAAATAAGAGGATATTGATCACGAGTGTGATGCTGA...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CCA 90 bp ACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGGAGGGTTGTCTTTCCCTAGGTGGGCTCTTCACTaGCTTCACTTCAGCTTGATC +
Preference number: 2 (lower is better)
Translates to: TLCLRMGREAWRGGLSFPRWALH*LHFSLI
Trigger: GATCAAGCTGAAGTGAAGCCAGTGAAGAGCCCACCT...AGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp AGTGGTAATGTCCCTGGCTTACTCCATCAAAATGCAGTGAGCATCATCAGAGTGCTCTGTCGCCCAGGCTaGAGTACGATGGCGCAATCT +
Preference number: 2 (lower is better)
Translates to: SGNVPGLLHQNAVSIIRVLCRPG*STMAQS
Trigger: AGATTGCGCCATCGTACTCCAGCCTGGGCGACAGAG...CACTCTGATGATGCTCACTGCATTTTGATGGAGTAAGCCAGGGACATTACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAAAATGTTCTCATGGTATaGAGGCCATTCTGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: LVQGKVSHTKACPASGTENVLMV*RPFCRV
Trigger: CACTCTACAGAATGGCCTTCATACCATGAGAACATT...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp AGACACTGTCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTATTACAGTCACATTCTaGAGTACTGAGATTAGGGCT +
Preference number: 2 (lower is better)
Translates to: RHCLWGLSVATLLCHTTPITVTF*STEIRA
Trigger: AGCCCTAATCTCAGTACTTCAGAATGTGACTGTAAT...AGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGCAGGCAGGAATGCACTaGCTGTGCCTCGCCCCGCCA +
Preference number: 2 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTEQAGMH*LCLAPP
Trigger: TGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTG...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTAGGCGGCAAAGCTGCTaGGAGGGCCTGTTCGCAGGC +
Preference number: 2 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRRRQSC*EGLFAG
Trigger: GCCTGCGAACAGGCCCTCCCAGCAGCTTTGCCGCCT...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR CCA 90 bp GAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTCTGCTGGGGTATCTGTCATaGAAGCAGGTCTCTGCATCA +
Preference number: 2 (lower is better)
Translates to: EHLEDVTSKVPFPTSNILLGYLS*KQVSAS
Trigger: TGATGCAGAGACCTGCTTCCATGACAGATACCCCAG...CAGAATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAAAACCTCCGTTTTGGTTaGATTCACACAGTCACCATA +
Preference number: 2 (lower is better)
Translates to: LVQGKVSHTKACPASGTENLRFG*IHTVTI
Trigger: TATGGTGACTGTGTGAATCCAACCAAAACGGAGGTT...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp CGGGCTGCCAACTGCAGACCCACCCAGGAATACTTCAGATGGCTCAAACACAGTCCTCATGTTGAAGATTaGAAGGAAATACCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: RAANCRPTQEYFRWLKHSPHVED*KEIPPS
Trigger: ACTTGGAGGTATTTCCTTTCAATCTTCAACATGAGG...ACTGTGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAATTCAAGCATCAACTCTaGATGGCAGAGACCCTAATC +
Preference number: 2 (lower is better)
Translates to: WPLTFASSLNGKRITGCQFKHQL*MAETLI
Trigger: GATTAGGGTCTCTGCCATTCAGAGTTGATGCTTGAA...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAACATTTGGTATGTCACTaGAAACCTGGCACACCACTT +
Preference number: 2 (lower is better)
Translates to: WPLTFASSLNGKRITGCQHLVCH*KPGTPL
Trigger: AAGTGGTGTGCCAGGTTTTCAGTGACATACCAAATG...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGACACGTCTGACATTGTaGTGGCGAAACCACCTCAAG +
Preference number: 2 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKTRLTL*WRNHLK
Trigger: CTTGAGGTGGTTTCGCCATCACAATGTCAGACGTGT...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCACACCCACCTGCCCGCTaGAGCCTGTGGGTCTCTTTC +
Preference number: 2 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPHPPAR*SLWVSF
Trigger: GAAAGAGACCCACAGGCTCCAGCGGGCAGGTGGGTG...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACATTCAGCTCTGGGTCTaGGGAACTGCACTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHIQLWV*GTALQQ
Trigger: TTGCTGAAGTGCAGTTCCCCAGACCCAGAGCTGAAT...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAAGTCACATGTATGACATaGAGACAACACATCCCCACA +
Preference number: 2 (lower is better)
Translates to: WPLTFASSLNGKRITGCQVTCMT*RQHIPT
Trigger: TGTGGGGATGTGTTGTCTCCATGTCATACATGTGAC...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACGCAGAGACCCTAATCTaGCTGTTATTAGCCACCAAG +
Preference number: 2 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHAETLI*LLLATK
Trigger: CTTGGTGGCTAATAACAGTCAGATTAGGGTCTCTGC...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAAACAAAGTCACATGTATaGCATGGAGACAACACATCC +
Preference number: 2 (lower is better)
Translates to: WPLTFASSLNGKRITGCQTKSHV*HGDNTS
Trigger: GGATGTGTTGTCTCCATGTCATACATGTGACTTTGT...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTAAGGGCCCAAGACGATaGAGAGGCGGCAAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRKGPRR*RGGKAA
Trigger: AGCAGCTTTGCCGCCTCTCCATCGTCTTGGGCCCTT...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR CCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACCAGGCTGGAATGCAGTaGTGTGATTATAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHQAGMQ*CDYSSL
Trigger: CAGTGAGCTATAATCACACCACTGCATTCCAGCCTG...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAATCTTGGCTTGTAAGATaGCTGTTTTCTCTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: WPLTFASSLNGKRITGCQSWLVR*LFSLWL
Trigger: AAGCCAGAGAGAAAACAGCCATCTTACAAGCCAAGA...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACACGGAACCTCCGTTTTaGTTGGATTCACACAGTCAC +
Preference number: 2 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHTEPPF*LDSHSH
Trigger: GTGACTGTGTGAATCCAACCAAAACGGAGGTTCCGT...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGATGGAAGCAGGTCTCTaGATCATACTGCAGATTCAG +
Preference number: 2 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKMEAGL*IILQIQ
Trigger: CTGAATCTGCAGTATGATGCAGAGACCTGCTTCCAT...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp GAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTCTGCCTTACCAGGTTTGGTaGCTAAAACAACAGACATTT +
Preference number: 2 (lower is better)
Translates to: EHLEDVTSKVPFPTSNILPYQVW*LKQQTF
Trigger: AAATGTCTGTTGTTTTAGCCACCAAACCTGGTAAGG...CAGAATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTTTAACCTGCAACAGCTaGGAACGAAGACTGAATCTT +
Preference number: 2 (lower is better)
Translates to: LALAFISLPKLQQIAESCLTCNS*ERRLNL
Trigger: AAGATTCAGTCTTCGTTCTCAGCTGTTGCAGGTTAA...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGAAACAGCCTTGCTTTTaGTTTCCCAAGATTTGCAGC +
Preference number: 2 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKKQPCF*FPKICS
Trigger: GCTGCAAATCTTGGGAAATCAAAAGCAAGGCTGTTT...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGCTGAGGTCGGGAGTTTaGGACCAGTCTGACCAACAT +
Preference number: 2 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTELRSGV*DQSDQH
Trigger: ATGTTGGTCAGACTGGTCTCAAACTCCCGACCTCAG...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCGTGATTATAGCTCACTaGAGCCTTGAATTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSVIIAH*SLEFLG
Trigger: GCCCAGGAATTCAAGGCTTCAGTGAGCTATAATCAC...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR TCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCCCACTTCTAACATTCTaGCTTCAAGCCTTTAAACTT +
Preference number: 2 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISPLLTF*LQAFKL
Trigger: AAGTTTAAAGGCTTGAAGTCAGAATGTTAGAAGTGG...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGATCACTGAAGCTTGCTaGTGGGTACATCAATTAGTT +
Preference number: 2 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKITEAC*WVHQLV
Trigger: AACTAATTGATGTACCCATCAGCAAGCTTCAGTGAT...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACCCAACAGAGATCAAATaGTCCTCAATCAGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHPTEIK*SSIRFQ
Trigger: TTGAAACCTGATTGAGGATCATTTGATCTCTGTTGG...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCCTGCCTTTTCTTTCTTaGCGTGCTTCATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSLPFLS*RASFQP
Trigger: TGGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAG...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR-3UTR GCA 90 bp AGTGGTAATGTCCCTGGCTTACTCCATCAAAATGCAGTGAGCATCATCAGAGTGAGGCATAAGCCACTGTaGCCAGCTAATCTATTATTT +
Preference number: 2 (lower is better)
Translates to: SGNVPGLLHQNAVSIIRVRHKPL*PANLLF
Trigger: AAATAATAGATTAGCTGGGCACAGTGGCTTATGCCT...CACTCTGATGATGCTCACTGCATTTTGATGGAGTAAGCCAGGGACATTACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTCTTCATCTTCGTCCTTaGGGCCAGGGCTGTAATACA +
Preference number: 2 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRLHLRP*GQGCNT
Trigger: TGTATTACAGCCCTGGCCCCAAGGACGAAGATGAAG...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR CAA 90 bp GACATGGAGACAACACATCCCCACAACGAACTGCATCATAGCTCCTaGAAATCAAAGGACCAAATTATAAACGAGTTTACACTGACTGGA +
Preference number: 2 (lower is better)
Translates to: DMETTHPHNELHHSS*KSKDQIINEFTLTG
Trigger: TCCAGTCAGTGTAAACTCGTTTATAATTTGGTCCTTTGATTTCAAGGAGCTATGATGCAGTTCGTTGTGGGGATGTGTTGTCTCCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp AGAACGAAGACTGAATCTTATCTAAGAGCAAACTTGCTGCAAAGGGATCCACACAAGATCACGCTTGTCTaGACAGCAAAACTGAGTATG +
Preference number: 2 (lower is better)
Translates to: RTKTESYLRANLLQRDPHKITLV*TAKLSM
Trigger: CATACTCAGTTTTGCTGTTCAGACAAGCGTGATCTT...GTGTGGATCCCTTTGCAGCAAGTTTGCTCTTAGATAAGATTCAGTCTTCGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGCCCACTCATCACCCATaGAAAAGATCACGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTEPTHHP*KRSRLS
Trigger: AGACAAGCGTGATCTTTTTCATGGGTGATGAGTGGG...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTCCCAAGATTTGCAGCTaGAAAACGTTGCCCCACTGG +
Preference number: 2 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFPKICS*KTLPHW
Trigger: CCAGTGGGGCAACGTTTTTCAGCTGCAAATCTTGGG...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTTGCATCATAGCTCCTTaGAATCAAAGGACCAAATTA +
Preference number: 2 (lower is better)
Translates to: LALAFISLPKLQQIAESCCIIAP*NQRTKL
Trigger: TAATTTGGTCCTTTGATTTCAAGGAGCTATGATGCA...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTCTTGGTATGACCTCTTaGGACCAGGAGGCTCTCACA +
Preference number: 2 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFLGMTS*DQEALT
Trigger: TGTGAGAGCCTCCTGGTCTCAAGAGGTCATACCAAG...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGCTGAGAGCTGTCCAATaGATTCTCCACATCACAGAC +
Preference number: 2 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTELRAVQ*ILHITD
Trigger: GTCTGTGATGTGGAGAATGCATTGGACAGCTCTCAG...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGCCTCTACTTTTCTTTTaGAGTTATAGGGTGCAAACA +
Preference number: 2 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKPLLFF*SYRVQT
Trigger: TGTTTGCACCCTATAACTCCAAAAGAAAAGTAGAGG...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTGGCCATTCTGTAGAGTaGACGTATATATGTTTATAT +
Preference number: 2 (lower is better)
Translates to: LALAFISLPKLQQIAESCGHSVE*TYICLY
Trigger: ATATAAACATATATACGTGCACTCTACAGAATGGCC...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCATTCCTGAGAACTGTGTaGAGCCATCTATGTACCCAC +
Preference number: 2 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPFLRTV*SHLCTH
Trigger: GTGGGTACATAGATGGCTGCACACAGTTCTCAGGAA...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR GCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCATTGCCCAGGCTGGAATaGAGTGGTGTGATTATAGCT +
Preference number: 2 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPLPRLE*SGVIIA
Trigger: AGCTATAATCACACCACTGCATTCCAGCCTGGGCAA...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CCA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTATACAAAAATTTAGCTaGGTGTGCTGGTGGGCGCCT +
Preference number: 2 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFIQKFS*VCWWAP
Trigger: AGGCGCCCACCAGCACACCCAGCTAAATTTTTGTAT...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR TCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAATTTTCTTCAATGGCTaGCACACCAAAAGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPIFFNG*HTKRRV
Trigger: GACCCTTCTTTTGGTGTGTCAGCCATTGAAGAAAAT...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR GCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTTTAGCAAGAGAATACTaGATCCAGCAACACTGCTTT +
Preference number: 2 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRLAREY*IQQHCF
Trigger: AAAGCAGTGTTGCTGGATGCAGTATTCTCTTGCTAA...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR GCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCGGCCATTCTGTAGAGTaGACGTATATATGTTTATAT +
Preference number: 2 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSGHSVE*TYICLY
Trigger: ATATAAACATATATACGTGCACTCTACAGAATGGCC...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR GCA 90 bp TTCCCTGTTCTCCTAGTATCATACTTCATCCTAACACAATTATTCCTGTTTTACTTAGCAAGAGAATACTaGATCCAGCAACACTGCTTT +
Preference number: 2 (lower is better)
Translates to: FPVLLVSYFILTQLFLFYLAREY*IQQHCF
Trigger: AAAGCAGTGTTGCTGGATGCAGTATTCTCTTGCTAA...GTAAAACAGGAATAATTGTGTTAGGATGAAGTATGATACTAGGAGAACAGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR GCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCATTTTCTTTCTTGACGTaGTTCATTCCAGCCAGTAAA +
Preference number: 2 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPFSFLT*FIPASK
Trigger: TTTACTGGCTGGAATGAAGCACGTCAAGAAAGAAAA...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR GCA 72 bp GGGAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTaGCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTC +
Preference number: 3 (lower is better)
Translates to: GRACSQAGMHWL*LAPPCPSTGGL
Trigger: GAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR GCA 72 bp GAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAAGCTaGTGGGAGGGCCTGTTCGCAGGCAGGAATGCACTG +
Preference number: 3 (lower is better)
Translates to: EQGPKTMERRQS*WEGLFAGRNAL
Trigger: CAGTGCATTCCTGCCTGCGAACAGGCCCTCCCAGCAGCTTTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR CAA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGCAGTCCCACAGCTATTaGAGCAAGGGCCCAAGACGA +
Preference number: 3 (lower is better)
Translates to: VWGTALQQASHPPARWSLQSHSY*SKGPRR
Trigger: TCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTG...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR CCA 72 bp CTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTaGGCTCTTCACTGGCTTCACTTCAGCTTGATCCTC +
Preference number: 3 (lower is better)
Translates to: LAVPRPAMSFHR*ALHWLHFSLIL
Trigger: GAGGATCAAGCTGAAGTGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR CCA 72 bp ACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTaGAGCCTGTGGGTCTCTTTCCTGAGAACTGTGTGC +
Preference number: 3 (lower is better)
Translates to: TALQQASHPPAR*SLWVSFLRTVC
Trigger: GCACACAGTTCTCAGGAAAGAGACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR GCA 72 bp GCAGATTCAGTGAATTCAGCTCTGGGTCTGGGGAACTaGACTTCAGCAAGCGTCCCACCCACCTGCCCGCTG +
Preference number: 3 (lower is better)
Translates to: ADSVNSALGLGN*TSASVPPTCPL
Trigger: CAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCAGAGCTGAATTCACTGAATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CAA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAAGCTTGGCGGGGAGGGTaGTCTTTCCCTAGGGTTGTG +
Preference number: 3 (lower is better)
Translates to: LVQGKVSHTKACPASGTEAWRGG*SFPRVV
Trigger: CACAACCCTAGGGAAAGACAACCCTCCCCGCCAAGC...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 72 bp CCAGCTGCTGCTCACCACAGCAGCCAACAAGGAATGTaGCCACTCTCCCCTTCAGTTTGCTCCTCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: PAAAHHSSQQGM*PLSPSVCSSSV
Trigger: CACTGAGGAGGAGCAAACTGAAGGGGAGAGTGGGCACATTCCTTGTTGGCTGCTGTGGTGAGCAGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 72 bp AGGCTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTaGCCTGCTTCGGGCACTGAACGCTTGCCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: RLVQGKVSHTKA*PASGTERLPVS
Trigger: GGAGACAGGCAAGCGTTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCAAGAATCAATTTTGGTaGAACGCAAGGGTAACATCC +
Preference number: 3 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSKNQFW*NARVTS
Trigger: GGATGTTACCCTTGCGTTCAACCAAAATTGATTCTT...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR TCA 72 bp ACCCACCTGCCCGCTGGAGCCTGTGGGTCTCTTTCCTaGGAACTGTGTGCAGCCATCTATGTACCCACTCAT +
Preference number: 3 (lower is better)
Translates to: THLPAGACGSLS*ELCAAIYVPTH
Trigger: ATGAGTGGGTACATAGATGGCTGCACACAGTTCTCAGGAAAGAGACCCACAGGCTCCAGCGGGCAGGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR TCA 72 bp GTCCTCACGAAACCTTGGTGGCCAAGGCCCTTGGTATaGCCTCTTGAGACCAGGAGGCTCTCACAGGCATCT +
Preference number: 3 (lower is better)
Translates to: VLTKPWWPRPLV*PLETRRLSQAS
Trigger: AGATGCCTGTGAGAGCCTCCTGGTCTCAAGAGGTCATACCAAGGGCCTTGGCCACCAAGGTTTCGTGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 72 bp TGTGCTGTGATCCCGCACGTTCCCGACAGGGCTTTCTaGATGTACGGGGCTGAGGCTGGTACAGGGAAAAGT +
Preference number: 3 (lower is better)
Translates to: CAVIPHVPDRAF*MYGAEAGTGKS
Trigger: ACTTTTCCCTGTACCAGCCTCAGCCCCGTACATTCAGAAAGCCCTGTCGGGAACGTGCGGGATCACAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CCA 72 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTaGGGTATCTGTCATGGAAGCAGGTCTCTGCATCAT +
Preference number: 3 (lower is better)
Translates to: KGWSQSASIRVT*GICHGSRSLHH
Trigger: ATGATGCAGAGACCTGCTTCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR CCA 72 bp TCAAGGTCCTCACGAAACCTTGGTGGCCAAGGCCCTTaGTATGACCTCTTGAGACCAGGAGGCTCTCACAGG +
Preference number: 3 (lower is better)
Translates to: SRSSRNLGGQGP*YDLLRPGGSHR
Trigger: CCTGTGAGAGCCTCCTGGTCTCAAGAGGTCATACCAAGGGCCTTGGCCACCAAGGTTTCGTGAGGACCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGAAGAATCAATTTTGGTaGAACGCAAGGGTAACATCC +
Preference number: 3 (lower is better)
Translates to: VWGTALQQASHPPARWSLKNQFW*NARVTS
Trigger: GGATGTTACCCTTGCGTTCAACCAAAATTGATTCTT...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CAA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAAACTTTTGGAGAACTTaGCCCCTAGGGCAGCAGCTT +
Preference number: 3 (lower is better)
Translates to: KGWSQSASIRVTWGICHGNFWRT*PLGQQL
Trigger: AAGCTGCTGCCCTAGGGGCAAAGTTCTCCAAAAGTT...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR GCA 72 bp TTCGTCCTTGGGGCCAGGGCTGTAATACACTCTGTATaGTCTGGCCACTTGATCGACCTCTTCTCTCGTGCC +
Preference number: 3 (lower is better)
Translates to: FVLGARAVIHSV*SGHLIDLFSRA
Trigger: GGCACGAGAGAAGAGGTCGATCAAGTGGCCAGAGCATACAGAGTGTATTACAGCCCTGGCCCCAAGGACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR TCA 72 bp AGGCCCACTCTCCTACCATCTGCCTCCTGCTGTTGCTaGAGCTTGCTGACACTTTCTCCACGCTGTCTTCTT +
Preference number: 3 (lower is better)
Translates to: RPTLLPSASCCC*SLLTLSPRCLL
Trigger: AAGAAGACAGCGTGGAGAAAGTGTCAGCAAGCTTCAGCAACAGCAGGAGGCAGATGGTAGGAGAGTGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CCA 72 bp GTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATaGAAGCAGGTCTCTGCATCATACTGCAGATTCAGT +
Preference number: 3 (lower is better)
Translates to: VRQHPSHLGYLS*KQVSASYCRFS
Trigger: ACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CAA 90 bp GAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTCTGTACGATGGCGCAATCTaGCCTCACTGCCACCTCTGC +
Preference number: 3 (lower is better)
Translates to: EHLEDVTSKVPFPTSNILYDGAI*PHCHLC
Trigger: GCAGAGGTGGCAGTGAGGCAAGATTGCGCCATCGTA...CAGAATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 72 bp CAGGGTCCCAGGGCCCTAGAAGTCTCTAAAAGCCACTaGGCAAACTTCTTTGCCTCTCAAAGCTGTGGCAAC +
Preference number: 3 (lower is better)
Translates to: QGPRALEVSKSH*ANFFASQSCGN
Trigger: GTTGCCACAGCTTTGAGAGGCAAAGAAGTTTGCTCAGTGGCTTTTAGAGACTTCTAGGGCCCTGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 72 bp CGCTGGAGCCTGTGGGTCTCTTTCCTGAGAACTGTGTaGAGCCATCTATGTACCCACTCATCACCCATGAAA +
Preference number: 3 (lower is better)
Translates to: RWSLWVSFLRTV*SHLCTHSSPMK
Trigger: TTTCATGGGTGATGAGTGGGTACATAGATGGCTGCACACAGTTCTCAGGAAAGAGACCCACAGGCTCCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR GCA 72 bp ATACAAAGGCCTGCCCTGCTTCGGGCACTGAACGCTTaGCTGTCTCCGTTAGGAATGGAATGTAATCCTTGC +
Preference number: 3 (lower is better)
Translates to: IQRPALLRALNA*LSPLGMECNPC
Trigger: GCAAGGATTACATTCCATTCCTAACGGAGACAGGCAAGCGTTCAGTGCCCGAAGCAGGGCAGGCCTTTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CCA 72 bp AACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTaGCGGGGAGGGTTGTCTTTCCCTAGGGTTGTGTCT +
Preference number: 3 (lower is better)
Translates to: NATLCLRMGREA*RGGLSFPRVVS
Trigger: AGACACAACCCTAGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CCA 72 bp GCTGCCAACTGCAGACCCACCCAGGAATACTTCAGATaGCTCAAACACAGTGGTAATGTCCCTGGCTTACTC +
Preference number: 3 (lower is better)
Translates to: AANCRPTQEYFR*LKHSGNVPGLL
Trigger: GAGTAAGCCAGGGACATTACCACTGTGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGATTCCAAGAATCAATTTaGGTTGAACGCAAGGGTAAC +
Preference number: 3 (lower is better)
Translates to: KGWSQSASIRVTWGICHGFQESI*VERKGN
Trigger: GTTACCCTTGCGTTCAACCAAAATTGATTCTTGGAA...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CAA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACAGAGTGGTCCGGAGCTaGACTGACAACGACCAGCTG +
Preference number: 3 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHRVVRS*TDNDQL
Trigger: CAGCTGGTCGTTGTCAGTCAAGCTCCGGACCACTCT...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 72 bp GGACATACCAGATGGTGTGTGACACGTCTGACATTGTaGTGGCGAAACCACCTCAAGGTCCTCACGAAACCT +
Preference number: 3 (lower is better)
Translates to: GHTRWCVTRLTL*WRNHLKVLTKP
Trigger: AGGTTTCGTGAGGACCTTGAGGTGGTTTCGCCATCACAATGTCAGACGTGTCACACACCATCTGGTATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 72 bp ATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTaGATTCAGCTCTGGGTCTGGGGAACTGCACTTCAG +
Preference number: 3 (lower is better)
Translates to: MEAGLCIILQIQ*IQLWVWGTALQ
Trigger: CTGAAGTGCAGTTCCCCAGACCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR TCA 72 bp GTCGTCAATCAATCAGTGAATGACTGTCTTGTGCTGTaGTCCCGCACGTTCCCGACAGGGCTTTCTGAATGT +
Preference number: 3 (lower is better)
Translates to: VVNQSVNDCLVL*SRTFPTGLSEC
Trigger: ACATTCAGAAAGCCCTGTCGGGAACGTGCGGGATCACAGCACAAGACAGTCATTCACTGATTGATTGACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 72 bp GGGTATCTGTCATGGAAGCAGGTCTCTGCATCATACTaGAGATTCAGTGAATTCAGCTCTGGGTCTGGGGAA +
Preference number: 3 (lower is better)
Translates to: GYLSWKQVSASY*RFSEFSSGSGE
Trigger: TTCCCCAGACCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGACAGATACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR-3UTR CAA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAACACGCCCGGCTAACTTaGGTATTTTTAGTAGAGACG +
Preference number: 3 (lower is better)
Translates to: WPLTFASSLNGKRITGCQHARLT*VFLVET
Trigger: CGTCTCTACTAAAAATACCAAAGTTAGCCGGGCGTG...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 72 bp GGGGAGGGTTGTCTTTCCCTAGGGTTGTGTCTTCCTTaGACTGGGTGCAAACATGGACAAAGTCACATGTAT +
Preference number: 3 (lower is better)
Translates to: GEGCLSLGLCLP*TGCKHGQSHMY
Trigger: ATACATGTGACTTTGTCCATGTTTGCACCCAGTTCAAGGAAGACACAACCCTAGGGAAAGACAACCCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 72 bp AGGTATTCCGCAATGTTGACGTCGTCAATCAATCAGTaGATGACTGTCTTGTGCTGTGATCCCGCACGTTCC +
Preference number: 3 (lower is better)
Translates to: RYSAMLTSSINQ*MTVLCCDPARS
Trigger: GGAACGTGCGGGATCACAGCACAAGACAGTCATTCACTGATTGATTGACGACGTCAACATTGCGGAATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 72 bp TTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTaGCAACTGCAGACCCACCCAGGAATACTTCAGATG +
Preference number: 3 (lower is better)
Translates to: FASSLNGKRITG*QLQTHPGILQM
Trigger: CATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTCCCCCAAGTAAAGGCTaGCCGATGTGTCGCTGCCGT +
Preference number: 3 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRPPSKG*PMCRCR
Trigger: ACGGCAGCGACACATCGGCAAGCCTTTACTTGGGGG...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR-3UTR CAA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACTACGGAACCTCCGTTTaGGTTGGATTCACACAGTCA +
Preference number: 3 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHYGTSV*VGFTQS
Trigger: TGACTGTGTGAATCCAACCAAAACGGAGGTTCCGTA...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp TCCAACCTGAATAACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGCCCAGCCAACTGTGGTaGTTTTTAAAGGACAAAGTT +
Preference number: 3 (lower is better)
Translates to: SNLNNATLCLRMGREAWRPSQLW*FLKDKV
Trigger: AACTTTGTCCTTTAAAAACAACCACAGTTGGCTGGG...CCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTTATTCAGGTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAACTGCATCATAGCTCCTaGAAATCAAAGGACCAAATT +
Preference number: 3 (lower is better)
Translates to: WPLTFASSLNGKRITGCQLHHSS*KSKDQI
Trigger: AATTTGGTCCTTTGATTTCAAGGAGCTATGATGCAG...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 72 bp AGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTaGGAGCTGTCCAATGCATTCTCCACATCACAGACT +
Preference number: 3 (lower is better)
Translates to: SFYLSAQATANC*ELSNAFSTSQT
Trigger: AGTCTGTGATGTGGAGAATGCATTGGACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 72 bp TGCCCAAGCTACAGCAAATTGCTGAGAGCTGTCCAATaGATTCTCCACATCACAGACTTGCTTTCTTTCAAG +
Preference number: 3 (lower is better)
Translates to: CPSYSKLLRAVQ*ILHITDLLSFK
Trigger: CTTGAAAGAAAGCAAGTCTGTGATGTGGAGAATGCATTGGACAGCTCTCAGCAATTTGCTGTAGCTTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CCA 72 bp CTGGGTGCAAACATGGACAAAGTCACATGTATGACATaGAGACAACACATCCCCACAACGAACTGCATCATA +
Preference number: 3 (lower is better)
Translates to: LGANMDKVTCMT*RQHIPTTNCII
Trigger: TATGATGCAGTTCGTTGTGGGGATGTGTTGTCTCCATGTCATACATGTGACTTTGTCCATGTTTGCACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCACAGTCCCACAGCTATTaGAGCAAGGGCCCAAGACGA +
Preference number: 3 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPQSHSY*SKGPRR
Trigger: TCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTG...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR TCA 72 bp CCACAGGGTAACCAAGCAGCATCTCTCCCTGCTTTTTaGTCATATTATAACAACTCGATGGAGAAACGCTTG +
Preference number: 3 (lower is better)
Translates to: PQGNQAASLPAF*SYYNNSMEKRL
Trigger: CAAGCGTTTCTCCATCGAGTTGTTATAATATGATCAAAAAGCAGGGAGAGATGCTGCTTGGTTACCCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 72 bp CGCAGTTCAGTGAGTTTTCACAGATGTATGCAGTTGTaGAGCGACCACTACCAAGACACAGATCATTTTTAC +
Preference number: 3 (lower is better)
Translates to: RSSVSFHRCMQL*SDHYQDTDHFY
Trigger: GTAAAAATGATCTGTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAACTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACAAGAATCAATTTTGGTaGAACGCAAGGGTAACATCC +
Preference number: 3 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHKNQFW*NARVTS
Trigger: GGATGTTACCCTTGCGTTCAACCAAAATTGATTCTT...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp AGTGGTAATGTCCCTGGCTTACTCCATCAAAATGCAGTGAGCATCATCAGAGTGTTCCAAGAATCAATTTaGGTTGAACGCAAGGGTAAC +
Preference number: 3 (lower is better)
Translates to: SGNVPGLLHQNAVSIIRVFQESI*VERKGN
Trigger: GTTACCCTTGCGTTCAACCAAAATTGATTCTTGGAA...CACTCTGATGATGCTCACTGCATTTTGATGGAGTAAGCCAGGGACATTACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGAACTTTTGGAGAACTTaGCCCCTAGGGCAGCAGCTT +
Preference number: 3 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTENFWRT*PLGQQL
Trigger: AAGCTGCTGCCCTAGGGGCAAAGTTCTCCAAAAGTT...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp AGAACGAAGACTGAATCTTATCTAAGAGCAAACTTGCTGCAAAGGGATCCACACCTCACAACTTCTCTCTaGGCTTGTAAGATGGCTGTT +
Preference number: 3 (lower is better)
Translates to: RTKTESYLRANLLQRDPHLTTSL*ACKMAV
Trigger: AACAGCCATCTTACAAGCCAAGAGAGAAGTTGTGAG...GTGTGGATCCCTTTGCAGCAAGTTTGCTCTTAGATAAGATTCAGTCTTCGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTAATGGGAAGAGAGGCTaGGCGGGGAGGGTTGTCTTT +
Preference number: 3 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFNGKRG*AGRVVF
Trigger: AAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATT...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGGAACCTCCGTTTTGGTaGGATTCACACAGTCACCAT +
Preference number: 3 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTEEPPFW*DSHSHH
Trigger: ATGGTGACTGTGTGAATCCAACCAAAACGGAGGTTC...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR-3UTR CAA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTTCTGCCTTTTCTTTCTaGACGTGCTTCATTCCAGCC +
Preference number: 3 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRSAFSF*TCFIPA
Trigger: GGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAGA...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR CCA 72 bp AGGGTAACATCCCCATCCAAAACAGAAATGTTCTCATaGTATGAAGGCCATTCTGTAGAGTGCACGTATATA +
Preference number: 3 (lower is better)
Translates to: RVTSPSKTEMFS*YEGHSVECTYI
Trigger: TATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGTTTTGGATGGGGATGTTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
3UTR-3UTR CAA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCATCATGTGTGTGGCAATaGAAGCAGCTATTTCTCCCT +
Preference number: 3 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPSCVWQ*KQLFLP
Trigger: AGGGAGAAATAGCTGCTTCAATTGCCACACACATGA...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577335.2
3UTR TCA 72 bp ATCTCACCTCTTACACTTAAGATATCAGCTGCTTCATaGACAGCCAGACACATGAATACATTCATGCCTACT +
Preference number: 3 (lower is better)
Translates to: ISPLTLKISAAS*TARHMNTFMPT
Trigger: AGTAGGCATGAATGTATTCATGTGTCTGGCTGTTCATGAAGCAGCTGATATCTTAAGTGTAAGAGGTGAGAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR GCA 72 bp CAAACTAATTGGGTAACAAATGCTCGCATGGGTGACTaGTCTTTTAAAGGTAGCTCATATACACATACACAA +
Preference number: 3 (lower is better)
Translates to: QTNWVTNARMGD*SFKGSSYTHTQ
Trigger: TTGTGTATGTGTATATGAGCTACCTTTAAAAGAGCAGTCACCCATGCGAGCATTTGTTACCCAATTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR TCA 72 bp TCTCTAAAGACCCTATCTCCAATTACAGTCACATTCTaGAGTACTGAGATTAGGGCTTCAATGTATAAATTT +
Preference number: 3 (lower is better)
Translates to: SLKTLSPITVTF*STEIRASMYKF
Trigger: AAATTTATACATTGAAGCCCTAATCTCAGTACTTCAGAATGTGACTGTAATTGGAGATAGGGTCTTTAGAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
3UTR GCA 72 bp GAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTaGACGTATATATGTTTATATTTATATAGGCTCCTA +
Preference number: 3 (lower is better)
Translates to: EMFSWYEGHSVE*TYICLYLYRLL
Trigger: TAGGAGCCTATATAAATATAAACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCGCGGCCTCGCAGTGCTaGGGGGCCGGGTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGAASQC*GAGFPG
Trigger: GCCTGGGAACCCGGCCCCTCAGCACTGCGAGGCCGC...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGCGACCACGGGGGTaGCGGCCTCGCAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: WVWGTALQQASHPPARWSLRPRG*RPRSAE
Trigger: CTCAGCACTGCGAGGCCGCCACCCCCGTGGTCGCAG...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCGCTTCGAGGGGCGCGTaGAGTCTCCGGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVASRGA*SLRGPS
Trigger: AGAAGGGCCCCGGAGACTCCACGCGCCCCTCGAAGC...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCGGACCAGCATCGCCATaGGCCTCGGAGACCGGGTCT +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGGPASP*ASETGS
Trigger: AGACCCGGTCTCCGAGGCTCATGGCGATGCTGGTCC...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAGCGGCCTCGCAGTGCTaGGGGGCCGGGTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGAASQC*GAGFPG
Trigger: GCCTGGGAACCCGGCCCCTCAGCACTGCGAGGCCGC...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCGGAATGCACTGGCTGTaGCTCGCCCCGCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSGMHWL*LAPPCP
Trigger: AGGACATGGCGGGGCGAGGCACAGCCAGTGCATTCC...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCGTTCGCAGGCAGGAATaGACTGGCTGTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSVRRQE*TGCASP
Trigger: GGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAAC...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCACAGGCAGGAATGCACTaGCTGTGCCTCGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASQAGMH*LCLAPP
Trigger: TGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTG...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCAAGGCGGCAAAGCTGCTaGGAGGGCCTGTTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASRRQSC*EGLFAG
Trigger: GCCTGCGAACAGGCCCTCCCAGCAGCTTTGCCGCCT...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCCACCCACCTGCCCGCTaGAGCCTGTGGGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVHPPAR*SLWVSF
Trigger: GAAAGAGACCCACAGGCTCCAGCGGGCAGGTGGGTG...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCGAGTGGTCCGGAGCTTaGCTGACAACGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVEWSGA*LTTTSC
Trigger: GCAGCTGGTCGTTGTCAGTCAAGCTCCGGACCACTC...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCTGCCGCGCGCAGAACTaGCTCAGCAAGACTCTCGCA +
Preference number: 4 (lower is better)
Translates to: WVWGTALQQASHPPARWSCRAQN*LSKTLA
Trigger: TGCGAGAGTCTTGCTGAGGCAGTTCTGCGCGCGGCA...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCCCAAGGCCCTTGGTATaGCCTCTTGAGACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGPRPLV*PLETRR
Trigger: CCTCCTGGTCTCAAGAGGTCATACCAAGGGCCTTGG...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCGACTGTCTTGTGCTGTaGTCCCGCACGTTCCCGACA +
Preference number: 4 (lower is better)
Translates to: WVWGTALQQASHPPARWSDCLVL*SRTFPT
Trigger: TGTCGGGAACGTGCGGGATCACAGCACAAGACAGTC...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCATGCCGCGCGCAGAACTaGCTCAGCAAGACTCTCGCA +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASCRAQN*LSKTLA
Trigger: TGCGAGAGTCTTGCTGAGGCAGTTCTGCGCGCGGCA...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCCCCCAAGTAAAGGCTTaGCGATGTGTCGCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSPQVKA*RCVAAV
Trigger: AACGGCAGCGACACATCGGCAAGCCTTTACTTGGGG...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCGTGATCTCGGCTCACTaGAACCTCCGCCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVVISAH*NLRLPD
Trigger: ATCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCAC...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAATCTCCGGGGCCCTTCTaGGACCACGGGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQSPGPF*DHGGGG
Trigger: GCCGCCACCCCCGTGGTCGCAGAAGGGCCCCGGAGA...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCCTGGGAGGCGGAGGTTaGAGTGAGCCAAGATTATGC +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVLGGGG*SEPRLC
Trigger: GCATAATCTTGGCTCACTGCAACCTCCGCCTCCCAG...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCCTCTCCCCTTCAGTTTaGTCCTCCTCAGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVLSPSV*SSSVSG
Trigger: CCCTGACACTGAGGAGGAGCAAACTGAAGGGGAGAG...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCAAAAGGATCACGGGCTaGCAACTGCAGACCCACCCA +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVKRITG*QLQTHP
Trigger: TGGGTGGGTCTGCAGTTGGCAGCCCGTGATCCTTTT...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGAAGAAGCGCCAAAGTTaGCCACCCAGAGGCCGCATA +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLKKRQS*PPRGRI
Trigger: TATGCGGCCTCTGGGTGGCCAACTTTGGCGCTTCTT...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCGGTGGCCAAGGCCCTTaGTATGACCTCTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGGGQGP*YDLLRP
Trigger: TGGTCTCAAGAGGTCATACCAAGGGCCTTGGCCACC...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCAACTCTCAACCTCAGGTaGTCCACCCGCCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASTLNLR*STRLCF
Trigger: GAAGCAAAGGCGGGTGGATCACCTGAGGTTGAGAGT...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCACCCCAAGTAAAGGCTTaGCGATGTGTCGCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASPQVKA*RCVAAV
Trigger: AACGGCAGCGACACATCGGCAAGCCTTTACTTGGGG...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAGAGAGGCGGCAAAGCTaGTGGGAGGGCCTGTTCGCA +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGERRQS*WEGLFA
Trigger: TGCGAACAGGCCCTCCCAGCAGCTTTGCCGCCTCTC...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCCTTCATCTTCGTCCTTaGGGCCAGGGCTGTAATACA +
Preference number: 4 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSLHLRP*GQGCNT
Trigger: TGTATTACAGCCCTGGCCCCAAGGACGAAGATGAAG...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCAGGTGGGCTCTTCACTaGCTTCACTTCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSRWALH*LHFSLI
Trigger: GATCAAGCTGAAGTGAAGCCAGTGAAGAGCCCACCT...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCATGTCCTTCCACAGGTaGGCTCTTCACTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: WVWGTALQQASHPPARWSMSFHR*ALHWLH
Trigger: GTGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACAT...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCAAGTCCCACAGCTATTTaGGCAAGGGCCCAAGACGAT +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASSPTAI*ARAQDD
Trigger: ATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACT...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCATGGTACAGGGAAAAGTaGGCCATACAAAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASWYREK*AIQRPA
Trigger: GGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCA...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCCCATGTTGGCCAGGATaGTCTCGATCTCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGPCWPG*SRSLDL
Trigger: GAGATCAAGAGATCGAGATCATCCTGGCCAACATGG...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTTGGGACCCGAGTTTTaGGCCTTAATTCTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLLGPEF*ALILRD
Trigger: GTCTCGGAGAATTAAGGCGCAAAACTCGGGTCCCAA...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAGGAGTCTTGCCCTGTTaGCAGGCTGGAGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGGVLPC*QAGVQW
Trigger: CCACTGCACTCCAGCCTGGCAACAGGGCAAGACTCC...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGCTTCATCTTCGTCCTTaGGGCCAGGGCTGTAATACA +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLLHLRP*GQGCNT
Trigger: TGTATTACAGCCCTGGCCCCAAGGACGAAGATGAAG...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCCTGGGGTATCTGTCATaGAAGCAGGTCTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGLGYLS*KQVSAS
Trigger: TGATGCAGAGACCTGCTTCCATGACAGATACCCCAG...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCATTACGCTCCCCAGTATaGGTTGTGAGGGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASLRSPV*VVRENG
Trigger: ACCGTTTTCCCTCACAACTCATACTGGGGAGCGTAA...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCCATGTGTGTGGCAATTaGAGCAGCTATTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSHVCGN*SSYFSL
Trigger: AAGGGAGAAATAGCTGCTTCAATTGCCACACACATG...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCGCAGAGACCCTAATCTaGCTGTTATTAGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: WVWGTALQQASHPPARWSAETLI*LLLATK
Trigger: CTTGGTGGCTAATAACAGTCAGATTAGGGTCTCTGC...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGGTGATTATAGCTCACTaGAGCCTTGAATTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLVIIAH*SLEFLG
Trigger: GCCCAGGAATTCAAGGCTTCAGTGAGCTATAATCAC...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCGCTACAGCAAATTGCTaGGAGCTGTCCAATGCATTC +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGATANC*ELSNAF
Trigger: GAATGCATTGGACAGCTCTCAGCAATTTGCTGTAGC...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGTCTCCGGGGCCCTTCTaGGACCACGGGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGSPGPF*DHGGGG
Trigger: GCCGCCACCCCCGTGGTCGCAGAAGGGCCCCGGAGA...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGACTGACAACGACCAGCTaGTGCTCACCACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGLTTTS*CSPQQP
Trigger: TGGCTGCTGTGGTGAGCAGCAGCTGGTCGTTGTCAG...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGACAGGGAGGTGGAGGTTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGQGGGG*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAACCTCCACCTCCCTG...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCGAAGCCTTGAATTCCTaGGCTCAAGTGATACTCCAT +
Preference number: 4 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSEALNS*AQVILH
Trigger: ATGGAGTATCACTTGAGCCCAGGAATTCAAGGCTTC...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCAGGCTGGAATGCAGTaGTGTGATTATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WVWGTALQQASHPPARWSQAGMQ*CDYSSL
Trigger: CAGTGAGCTATAATCACACCACTGCATTCCAGCCTG...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCACGGAACCTCCGTTTTaGTTGGATTCACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: WVWGTALQQASHPPARWSTEPPF*LDSHSH
Trigger: GTGACTGTGTGAATCCAACCAAAACGGAGGTTCCGT...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCAATGTTCTCATGGTATaGAGGCCATTCTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSNVLMV*RPFCRV
Trigger: CACTCTACAGAATGGCCTTCATACCATGAGAACATT...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCAAGCATCAACTCTaGATGGCAGAGACCCTAATC +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGFKHQL*MAETLI
Trigger: GATTAGGGTCTCTGCCATTCAGAGTTGATGCTTGAA...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCACCCACTCATCACCCATaGAAAAGATCACGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASPTHHP*KRSRLS
Trigger: AGACAAGCGTGATCTTTTTCATGGGTGATGAGTGGG...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGCGCCACGCCTCCGCTTaGCGCGCGCAGAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGRHASA*RAQNCL
Trigger: GAGGCAGTTCTGCGCGCGGCAAGCGGAGGCGTGGCG...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGGTAATACACTCTGTATaGTCTGGCCACTTGATCGAC +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLVIHSV*SGHLID
Trigger: GTCGATCAAGTGGCCAGAGCATACAGAGTGTATTAC...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp AGACACTGTCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTTCACGGGCTGCCAACTaGAGACCCACCCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: RHCLWGLSVATLLCHTTPSRAAN*RPTQEY
Trigger: GTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCGTGA...AGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCAAGTCTATTGCATCAGTaGTTCTCAGCAGCCTACTGC +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASSLLHQ*FSAAYC
Trigger: GCAGTAGGCTGCTGAGAACCACTGATGCAATAGACT...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAAGGACCAGCATCGCCATaGGCCTCGGAGACCGGGTCT +
Preference number: 4 (lower is better)
Translates to: WPLTFASSLNGKRITGCQGPASP*ASETGS
Trigger: AGACCCGGTCTCCGAGGCTCATGGCGATGCTGGTCC...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCACATTTGGTATGTCACTaGAAACCTGGCACACCACTT +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASHLVCH*KPGTPL
Trigger: AAGTGGTGTGCCAGGTTTTCAGTGACATACCAAATG...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTTAACCTGCAACAGCTaGGAACGAAGACTGAATCTT +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLLTCNS*ERRLNL
Trigger: AAGATTCAGTCTTCGTTCTCAGCTGTTGCAGGTTAA...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGCGCCACGCCTCCGCTTaGCGCGCGCAGAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKRHASA*RAQNCL
Trigger: GAGGCAGTTCTGCGCGCGGCAAGCGGAGGCGTGGCG...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAAGCAATCTTGCCTCACTaGCACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LVQGKVSHTKACPASGTEAILPH*HLCLLG
Trigger: ACCCAGGAGGCAGAGGTGGCAGTGAGGCAAGATTGC...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAAAGGCATGAGCCACCGTaGCCAGCCAACTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LVQGKVSHTKACPASGTERHEPP*PANCGC
Trigger: ACAACCACAGTTGGCTGGGCACGGTGGCTCATGCCT...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTCCACATCACAGACTTaGTTTCTTTCAAGACTGCCT +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLSTSQT*FLSRLP
Trigger: AGGCAGTCTTGAAAGAAAGCAAGTCTGTGATGTGGA...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCATGGCCTCATGTGTGTaGCAATTGAAGCAGCTATTT +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGMASCV*QLKQLF
Trigger: AAATAGCTGCTTCAATTGCCACACACATGAGGCCAT...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTCAGCATCACACTCGTaGTCAATATCCTCTTATTTC +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGSASHS*SISSYF
Trigger: GAAATAAGAGGATATTGATCACGAGTGTGATGCTGA...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCATTACAGTCACATTCTaGAGTACTGAGATTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVITVTF*STEIRA
Trigger: AGCCCTAATCTCAGTACTTCAGAATGTGACTGTAAT...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp AGACACTGTCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTCTTGGTATGACCTCTTaGGACCAGGAGGCTCTCACA +
Preference number: 4 (lower is better)
Translates to: RHCLWGLSVATLLCHTTPLGMTS*DQEALT
Trigger: TGTGAGAGCCTCCTGGTCTCAAGAGGTCATACCAAG...AGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp CAGGAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTCCCTGCTTCGGGCACTaGACGCTTGCCTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: QEHLEDVTSKVPFPTSNIPCFGH*TLACLR
Trigger: ACGGAGACAGGCAAGCGTTCAGTGCCCGAAGCAGGG...AATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGGATCTCTTGATCTCGTaGTCTGCCTTTTCTTTATCT +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLDLLIS*SAFSLS
Trigger: AGATAAAGAAAAGGCAGATCACGAGATCAAGAGATC...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCTCTCCGGGGCCCTTCTaGGACCACGGGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCSPGPF*DHGGGG
Trigger: GCCGCCACCCCCGTGGTCGCAGAAGGGCCCCGGAGA...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTAGCAAGAGAATACTaGATCCAGCAACACTGCTTT +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGLAREY*IQQHCF
Trigger: AAAGCAGTGTTGCTGGATGCAGTATTCTCTTGCTAA...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp CAGGAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTGTTCGCAGGCAGGAATaGACTGGCTGTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: QEHLEDVTSKVPFPTSNIVRRQE*TGCASP
Trigger: GGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAAC...AATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAAGAGAGGCGGCAAAGCTaGTGGGAGGGCCTGTTCGCA +
Preference number: 4 (lower is better)
Translates to: WPLTFASSLNGKRITGCQERRQS*WEGLFA
Trigger: TGCGAACAGGCCCTCCCAGCAGCTTTGCCGCCTCTC...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCGTACAATCCAGTATATaGAGAAAGGTACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGVQSSI*RKVLSI
Trigger: GATGCTGAGTACCTTTCTGCATATACTGGATTGTAC...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCAGGCATAAGCCACTGTaGCCAGCTAATCTATTATTT +
Preference number: 4 (lower is better)
Translates to: WVWGTALQQASHPPARWSRHKPL*PANLLF
Trigger: AAATAATAGATTAGCTGGGCACAGTGGCTTATGCCT...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCCTTACTCCATCAAAATaGAGTGAGCATCATCAGAGT +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVLTPSK*SEHHQS
Trigger: ACTCTGATGATGCTCACTGCATTTTGATGGAGTAAG...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp AGACACTGTCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTTTTGAGATGGAGTCTTaGCCTGTTGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RHCLWGLSVATLLCHTTPFEMES*PVARLE
Trigger: CTCCAGCCTGGCAACAGGGCAAGACTCCATCTCAAA...AGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTGCTTCGAGGGGCGCGTaGAGTCTCCGGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LALAFISLPKLQQIAESCASRGA*SLRGPS
Trigger: AGAAGGGCCCCGGAGACTCCACGCGCCCCTCGAAGC...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGCAGGCAGGAATGCACTaGCTGTGCCTCGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGQAGMH*LCLAPP
Trigger: TGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTG...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAAAGGGCCCAAGACGATaGAGAGGCGGCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQKGPRR*RGGKAA
Trigger: AGCAGCTTTGCCGCCTCTCCATCGTCTTGGGCCCTT...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTCACAACTTCTCTCTTaGCTTGTAAGATGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLSQLLS*LVRWLF
Trigger: AAACAGCCATCTTACAAGCCAAGAGAGAAGTTGTGA...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCAAACCTCCGTTTTGGTTaGATTCACACAGTCACCATA +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASNLRFG*IHTVTI
Trigger: TATGGTGACTGTGTGAATCCAACCAAAACGGAGGTT...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAAGTCCTCACGAAACCTTaGTGGCCAAGGCCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LVQGKVSHTKACPASGTEVLTKP*WPRPLV
Trigger: TACCAAGGGCCTTGGCCACCAAGGTTTCGTGAGGAC...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAATCCATTTCAGTCTCCTaGGTAGCCAGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: LVQGKVSHTKACPASGTESISVS*VARTTG
Trigger: GCCTGTAGTCCTGGCTACTCAGGAGACTGAAATGGA...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGCCACTTCTAACATTCTaGCTTCAAGCCTTTAAACTT +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLPLLTF*LQAFKL
Trigger: AAGTTTAAAGGCTTGAAGTCAGAATGTTAGAAGTGG...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCTTAGCATCCTCATGTTaGAGATTGAAAGGAAATACC +
Preference number: 4 (lower is better)
Translates to: GTALQQASHPPARWSLWVLASSC*RLKGNT
Trigger: GGTATTTCCTTTCAATCTTCAACATGAGGATGCTAA...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TCCAACCTGAATAACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGAGTACCCCAGTGGTGTaGCACTGCCGGACCACAGAC +
Preference number: 4 (lower is better)
Translates to: SNLNNATLCLRMGREAWRSTPVV*HCRTTD
Trigger: GTCTGTGGTCCGGCAGTGTCACACCACTGGGGTACT...CCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTTATTCAGGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCACACTCAAAAGAGAGTTaGAGTTTAGGTGCACTAGTT +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASHSKES*SLGALV
Trigger: AACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTG...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTTTTCTTTCTTGACGTaGTTCATTCCAGCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: VWGTALQQASHPPARWSLFSFLT*FIPASK
Trigger: TTTACTGGCTGGAATGAAGCACGTCAAGAAAGAAAA...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTTTCTTTCTTGACGTaGTTCATTCCAGCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGFSFLT*FIPASK
Trigger: TTTACTGGCTGGAATGAAGCACGTCAAGAAAGAAAA...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCGGCCATTCTGTAGAGTaGACGTATATATGTTTATAT +
Preference number: 4 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSGHSVE*TYICLY
Trigger: ATATAAACATATATACGTGCACTCTACAGAATGGCC...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCGGAATGCACTGGCTGTaGCTCGCCCCGCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISGMHWL*LAPPCP
Trigger: AGGACATGGCGGGGCGAGGCACAGCCAGTGCATTCC...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGATTCCTGAGAACTGTGTaGAGCCATCTATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGFLRTV*SHLCTH
Trigger: GTGGGTACATAGATGGCTGCACACAGTTCTCAGGAA...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp TCCAACCTGAATAACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGTGGCTACTCTGCTCTaGCACACCACACCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SNLNNATLCLRMGREAWRVATLL*HTTPEA
Trigger: GGCCTCAGGTGTGGTGTGGCAGAGCAGAGTAGCCAC...CCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTTATTCAGGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp CGGGCTGCCAACTGCAGACCCACCCAGGAATACTTCAGATGGCTCAAACACAGTCCTTGCAGGGCTCTCTaGCCCACTTTCTTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: RAANCRPTQEYFRWLKHSPCRAL*PTFFCN
Trigger: GTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGG...ACTGTGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAATGACCTCAGCTCAGTaGAATCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQMTSAQ*NLCLPG
Trigger: ACCCGGGAGGCAGAGATTGCACTGAGCTGAGGTCAT...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp ACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGGAGGGTTGTCTTTCCCTCCCCAAATCCCCTCCTaGCCCTGGCAATCATTTGCC +
Preference number: 4 (lower is better)
Translates to: TLCLRMGREAWRGGLSFPPQIPS*PWQSFA
Trigger: GGCAAATGATTGCCAGGGGCAGGAGGGGATTTGGGG...AGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGAGGCGGCAAAGCTGCTaGGAGGGCCTGTTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKRRQSC*EGLFAG
Trigger: GCCTGCGAACAGGCCCTCCCAGCAGCTTTGCCGCCT...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCCACCCACCTGCCCGCTaGAGCCTGTGGGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISHPPAR*SLWVSF
Trigger: GAAAGAGACCCACAGGCTCCAGCGGGCAGGTGGGTG...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp AGACACTGTCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTAGAAGACACTGTCTCTaGGGCCTAAGTGTGGCTACT +
Preference number: 4 (lower is better)
Translates to: RHCLWGLSVATLLCHTTPRRHCL*GLSVAT
Trigger: AGTAGCCACACTTAGGCCCCAGAGACAGTGTCTTCT...AGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 72 bp CAAAATGCAGTGAGCATCATCAGAGTGGTCCGGAGCTaGACTGACAACGACCAGCTGCTGCTCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: QNAVSIIRVVRS*TDNDQLLLTTA
Trigger: TGCTGTGGTGAGCAGCAGCTGGTCGTTGTCAGTCAAGCTCCGGACCACTCTGATGATGCTCACTGCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAGCGGCCTCGCAGTGCTaGGGGGCCGGGTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPAASQC*GAGFPG
Trigger: GCCTGGGAACCCGGCCCCTCAGCACTGCGAGGCCGC...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAACCCAAGATTTGCAGCTaGAAAACGTTGCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQPKICS*KTLPHW
Trigger: CCAGTGGGGCAACGTTTTTCAGCTGCAAATCTTGGG...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCCTGCCACACCACACCTaGGGCCCACTCTCCTACCAT +
Preference number: 4 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISLPHHT*GPLSYH
Trigger: ATGGTAGGAGAGTGGGCCTCAGGTGTGGTGTGGCAG...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGCCCGACAGGGCTTTCTaGATGTACGGGGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGPDRAF*MYGAEA
Trigger: AGCCTCAGCCCCGTACATTCAGAAAGCCCTGTCGGG...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCATTTTCTTTCTTGACGTaGTTCATTCCAGCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: GCASPRHVLPQVGSSLASFSFLT*FIPASK
Trigger: TTTACTGGCTGGAATGAAGCACGTCAAGAAAGAAAA...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp CACTGGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCGGCCATTCTGTAGAGTaGACGTATATATGTTTATAT +
Preference number: 4 (lower is better)
Translates to: HWLCLAPPCPSTGGLFTGGHSVE*TYICLY
Trigger: ATATAAACATATATACGTGCACTCTACAGAATGGCC...GCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCGCTTCGAGGGGCGCGTaGAGTCTCCGGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCASRGA*SLRGPS
Trigger: AGAAGGGCCCCGGAGACTCCACGCGCCCCTCGAAGC...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp CAGGAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTTTCAGAGGCACATGCTaGGAATGGGCTGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QEHLEDVTSKVPFPTSNIFRGTC*EWAGVA
Trigger: TGCCACCCCAGCCCATTCCCAGCATGTGCCTCTGAA...AATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 72 bp ACGTTGCCCCACTGGCATACGGAACCTCCGTTTTGGTaGGATTCACACAGTCACCATAAGCGCACGATAGCA +
Preference number: 4 (lower is better)
Translates to: TLPHWHTEPPFW*DSHSHHKRTIA
Trigger: TGCTATCGTGCGCTTATGGTGACTGTGTGAATCCAACCAAAACGGAGGTTCCGTATGCCAGTGGGGCAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 72 bp CCAGGAGGCTCTCACAGGCATCTACAGAGCTCAGCCTaGGCCCCTTACCTTTGCATCATCCTTGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: PGGSHRHLQSSA*APYLCIILEWK
Trigger: TTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCAAGGCTGAGCTCTGTAGATGCCTGTGAGAGCCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 72 bp AGGAGAATCCATGTGCCTAAGACTGAGGTGGGGATCTaGTTAAAATACAGACTGTGGGCCAGGCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RRIHVPKTEVGI*LKYRLWARRGG
Trigger: GCCACCACGCCTGGCCCACAGTCTGTATTTTAACAAGATCCCCACCTCAGTCTTAGGCACATGGATTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAAAGATCACGCTTGTCTaGACAGCAAAACTGAGTATG +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGKITLV*TAKLSM
Trigger: CATACTCAGTTTTGCTGTTCAGACAAGCGTGATCTT...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAACAAAGTCACATGTATaGCATGGAGACAACACATCC +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGTKSHV*HGDNTS
Trigger: GGATGTGTTGTCTCCATGTCATACATGTGACTTTGT...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGATGGAAAGACTGCACTaGGCCCCGATAAGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGMERLH*APIRPH
Trigger: GTGGGGCCTTATCGGGGCTCAGTGCAGTCTTTCCAT...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACTGCCGCGCGCAGAACTaGCTCAGCAAGACTCTCGCA +
Preference number: 4 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHCRAQN*LSKTLA
Trigger: TGCGAGAGTCTTGCTGAGGCAGTTCTGCGCGCGGCA...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAAACAACGACCAGCTGCTaGTCACCACAGCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: WPLTFASSLNGKRITGCQTTTSC*SPQQPT
Trigger: TGTTGGCTGCTGTGGTGAGCAGCAGCTGGTCGTTGT...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTCTGCGACCACGGGGGTaGCGGCCTCGCAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICLRPRG*RPRSAE
Trigger: CTCAGCACTGCGAGGCCGCCACCCCCGTGGTCGCAG...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAAGGTGGGCTCTTCACTaGCTTCACTTCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQRWALH*LHFSLI
Trigger: GATCAAGCTGAAGTGAAGCCAGTGAAGAGCCCACCT...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCCAGGCAGGAATGCACTaGCTGTGCCTCGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCQAGMH*LCLAPP
Trigger: TGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTG...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAGTGATTATAGCTCACTaGAGCCTTGAATTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQVIIAH*SLEFLG
Trigger: GCCCAGGAATTCAAGGCTTCAGTGAGCTATAATCAC...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp ACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGGAGGGTTGTCTTTCCCTAAAACAGACTGTGATTaGGGAGAGCTGGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLCLRMGREAWRGGLSFPKTDCD*GELEWS
Trigger: GCTCCACTCCAGCTCTCCTCAATCACAGTCTGTTTT...AGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp CGGGCTGCCAACTGCAGACCCACCCAGGAATACTTCAGATGGCTCAAACACAGTCTGAGCAAACTTCTTTaGCTCTCAAAGCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RAANCRPTQEYFRWLKHSLSKLL*LSKLWQ
Trigger: TTGCCACAGCTTTGAGAGGCAAAGAAGTTTGCTCAG...ACTGTGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCCGGGCACTGAACGCTTaGCTGTCTCCGTTAGGAATG +
Preference number: 4 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISRALNA*LSPLGM
Trigger: CATTCCTAACGGAGACAGGCAAGCGTTCAGTGCCCG...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGGTTGCCAGGCTGGAGTaGAGTGGCATGACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKVARLE*SGMTSA
Trigger: AGCTGAGGTCATGCCACTGCACTCCAGCCTGGCAAC...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACCTCTGTCGCCCAGGCTaGAGTACGATGGCGCAATCT +
Preference number: 4 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHLCRPG*STMAQS
Trigger: AGATTGCGCCATCGTACTCCAGCCTGGGCGACAGAG...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAAACCTACCTAGAAATTaGGACCCGAGTTTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQNLPRN*DPSFAP
Trigger: AGGCGCAAAACTCGGGTCCCAATTTCTAGGTAGGTT...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGACAGGAATACTTCAGATaGCTCAAACACAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGQEYFR*LKHSGN
Trigger: ATTACCACTGTGTTTGAGCCATCTGAAGTATTCCTG...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGCAGGCTGGAGTGCAGTaGCATGACCTCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKQAGVQ*HDLSSV
Trigger: CACTGAGCTGAGGTCATGCCACTGCACTCCAGCCTG...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 72 bp TGTTTAAGAATGGGAAGAGAGGCTTGGCGGGGAGGGTaGTCTTTCCCTAGGGTTGTGTCTTCCTTGAACTGG +
Preference number: 4 (lower is better)
Translates to: CLRMGREAWRGG*SFPRVVSSLNW
Trigger: CCAGTTCAAGGAAGACACAACCCTAGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGTCCATTTCAGTCTCCTaGGTAGCCAGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGSISVS*VARTTG
Trigger: GCCTGTAGTCCTGGCTACTCAGGAGACTGAAATGGA...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGGTTGCTGAAGCTTGCTaGCACTTTCTCCACGCTGTC +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGVAEAC*HFLHAV
Trigger: GACAGCGTGGAGAAAGTGTCAGCAAGCTTCAGCAAC...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCGGTCCGGAGCTTGACTaGCAACGACCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCGPELD*QRPAAA
Trigger: AGCAGCAGCTGGTCGTTGTCAGTCAAGCTCCGGACC...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCAGCTGGAGTGGAGCCTaGGAAGCTGCATTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISSWSGA*EAAFLL
Trigger: TAGCAGAAATGCAGCTTCTCAGGCTCCACTCCAGCT...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGACAATCAGGTTTCAATTaGGTATTTGAGAATGCCTAC +
Preference number: 4 (lower is better)
Translates to: KGWSQSASIRVTWGICHGQSGFN*VFENAY
Trigger: GTAGGCATTCTCAAATACTCAATTGAAACCTGATTG...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp ACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGGAGGGTTGTCTTTCCCTTTCCTGAGAACTGTGTaGAGCCATCTATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: TLCLRMGREAWRGGLSFPFLRTV*SHLCTH
Trigger: GTGGGTACATAGATGGCTGCACACAGTTCTCAGGAA...AGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TCCAACCTGAATAACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGTCTTGTCTGGTTATGTaGATCCCAGAGGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: SNLNNATLCLRMGREAWRSCLVM*IPEALS
Trigger: GGAGAGTGCCTCTGGGATGCACATAACCAGACAAGA...CCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTTATTCAGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TCCAACCTGAATAACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGCTTCATCTTCGTCCTTaGGGCCAGGGCTGTAATACA +
Preference number: 4 (lower is better)
Translates to: SNLNNATLCLRMGREAWRLHLRP*GQGCNT
Trigger: TGTATTACAGCCCTGGCCCCAAGGACGAAGATGAAG...CCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTTATTCAGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGATGGGAAGAGAGGCTTaGCGGGGAGGGTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKMGREA*RGGLSF
Trigger: GAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCAT...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 72 bp CAAACAGGAACCTACCTAGAAATTGGGACCCGAGTTTaGCGCCTTAATTCTCCGAGACTGTCCCCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QTGTYLEIGTRV*RLNSPRLSPCA
Trigger: TGCACAAGGGGACAGTCTCGGAGAATTAAGGCGCAAAACTCGGGTCCCAATTTCTAGGTAGGTTCCTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 72 bp CGGGGAGGGTTGTCTTTCCCTAGGGTTGTGTCTTCCTaGAACTGGGTGCAAACATGGACAAAGTCACATGTA +
Preference number: 4 (lower is better)
Translates to: RGGLSFPRVVSS*NWVQTWTKSHV
Trigger: TACATGTGACTTTGTCCATGTTTGCACCCAGTTCAAGGAAGACACAACCCTAGGGAAAGACAACCCTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACAGTCCCACAGCTATTTaGGCAAGGGCCCAAGACGAT +
Preference number: 4 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHSPTAI*ARAQDD
Trigger: ATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACT...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAAAGATCACGCTTGTCTaGACAGCAAAACTGAGTATG +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQKITLV*TAKLSM
Trigger: CATACTCAGTTTTGCTGTTCAGACAAGCGTGATCTT...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTCTGAGGTCGGGAGTTTaGGACCAGTCTGACCAACAT +
Preference number: 4 (lower is better)
Translates to: LALAFISLPKLQQIAESCLRSGV*DQSDQH
Trigger: ATGTTGGTCAGACTGGTCTCAAACTCCCGACCTCAG...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACGCCTCCTGCTGTTGCTaGAGCTTGCTGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHASCCC*SLLTLS
Trigger: AGAAAGTGTCAGCAAGCTTCAGCAACAGCAGGAGGC...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTGGAATGCACTGGCTGTaGCTCGCCCCGCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRGMHWL*LAPPCP
Trigger: AGGACATGGCGGGGCGAGGCACAGCCAGTGCATTCC...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTGTTCGCAGGCAGGAATaGACTGGCTGTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICVRRQE*TGCASP
Trigger: GGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAAC...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp CGGGCTGCCAACTGCAGACCCACCCAGGAATACTTCAGATGGCTCAAACACAGTAGGCATAAGCCACTGTaGCCAGCTAATCTATTATTT +
Preference number: 4 (lower is better)
Translates to: RAANCRPTQEYFRWLKHSRHKPL*PANLLF
Trigger: AAATAATAGATTAGCTGGGCACAGTGGCTTATGCCT...ACTGTGTTTGAGCCATCTGAAGTATTCCTGGGTGGGTCTGCAGTTGGCAGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp AGAACGAAGACTGAATCTTATCTAAGAGCAAACTTGCTGCAAAGGGATCCACACAAGGGCCCAAGACGATaGAGAGGCGGCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RTKTESYLRANLLQRDPHKGPRR*RGGKAA
Trigger: AGCAGCTTTGCCGCCTCTCCATCGTCTTGGGCCCTT...GTGTGGATCCCTTTGCAGCAAGTTTGCTCTTAGATAAGATTCAGTCTTCGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCAAGGGCCCAAGACGATaGAGAGGCGGCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCKGPRR*RGGKAA
Trigger: AGCAGCTTTGCCGCCTCTCCATCGTCTTGGGCCCTT...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAAATACAAAAATTTAGCTaGGTGTGCTGGTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: WPLTFASSLNGKRITGCQIQKFS*VCWWAP
Trigger: AGGCGCCCACCAGCACACCCAGCTAAATTTTTGTAT...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGCTGCCTTTTCTTTCTTaGCGTGCTTCATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGLPFLS*RASFQP
Trigger: TGGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAG...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAATTACAGTCACATTCTaGAGTACTGAGATTAGGGCT +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQITVTF*STEIRA
Trigger: AGCCCTAATCTCAGTACTTCAGAATGTGACTGTAAT...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp AGAACGAAGACTGAATCTTATCTAAGAGCAAACTTGCTGCAAAGGGATCCACACCCCCAAGTAAAGGCTTaGCGATGTGTCGCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: RTKTESYLRANLLQRDPHPQVKA*RCVAAV
Trigger: AACGGCAGCGACACATCGGCAAGCCTTTACTTGGGG...GTGTGGATCCCTTTGCAGCAAGTTTGCTCTTAGATAAGATTCAGTCTTCGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAATTAGCAAGAGAATACTaGATCCAGCAACACTGCTTT +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQLAREY*IQQHCF
Trigger: AAAGCAGTGTTGCTGGATGCAGTATTCTCTTGCTAA...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAGTACAATCCAGTATATaGAGAAAGGTACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQVQSSI*RKVLSI
Trigger: GATGCTGAGTACCTTTCTGCATATACTGGATTGTAC...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGAAATTTAGCTGGGTGTaGTGGTGGGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKKFSWV*WWAPVI
Trigger: GATTACAGGCGCCCACCAGCACACCCAGCTAAATTT...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp AGTGGTAATGTCCCTGGCTTACTCCATCAAAATGCAGTGAGCATCATCAGAGTGTTCTCAGCAGCCTACTaGACTAGGGCCAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: SGNVPGLLHQNAVSIIRVFSAAY*TRANRD
Trigger: ATCTCTGTTGGCCCTAGTGCAGTAGGCTGCTGAGAA...CACTCTGATGATGCTCACTGCATTTTGATGGAGTAAGCCAGGGACATTACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp CAGGAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTGAGTTGAAGTTTAGGTaGACTAGTTGGCACTTTGGG +
Preference number: 4 (lower is better)
Translates to: QEHLEDVTSKVPFPTSNIELKFR*TSWHFG
Trigger: CCCAAAGTGCCAACTAGTGCACCTAAACTTCAACTC...AATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGATTCAGCTCTGGGTCTaGGGAACTGCACTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKIQLWV*GTALQQ
Trigger: TTGCTGAAGTGCAGTTCCCCAGACCCAGAGCTGAAT...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGCAGGCTGGAATGCAGTaGTGTGATTATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGQAGMQ*CDYSSL
Trigger: CAGTGAGCTATAATCACACCACTGCATTCCAGCCTG...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp ACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGGAGGGTTGTCTTTCCCTGTGCCCAGCCAACTGTaGTTGTTTTTAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: TLCLRMGREAWRGGLSFPVPSQL*LFLKDK
Trigger: TTTGTCCTTTAAAAACAACCACAGTTGGCTGGGCAC...AGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGCTGCCTTTTCTTTCTTaGCGTGCTTCATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKLPFLS*RASFQP
Trigger: TGGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAG...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGCATGTGTGTGGCAATTaGAGCAGCTATTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGHVCGN*SSYFSL
Trigger: AAGGGAGAAATAGCTGCTTCAATTGCCACACACATG...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp CAGGAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTAATGTTCTCATGGTATaGAGGCCATTCTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: QEHLEDVTSKVPFPTSNINVLMV*RPFCRV
Trigger: CACTCTACAGAATGGCCTTCATACCATGAGAACATT...AATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGTTCAAGCATCAACTCTaGATGGCAGAGACCCTAATC +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGFKHQL*MAETLI
Trigger: GATTAGGGTCTCTGCCATTCAGAGTTGATGCTTGAA...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp AGTGGTAATGTCCCTGGCTTACTCCATCAAAATGCAGTGAGCATCATCAGAGTGCCCACTCATCACCCATaGAAAAGATCACGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SGNVPGLLHQNAVSIIRVPTHHP*KRSRLS
Trigger: AGACAAGCGTGATCTTTTTCATGGGTGATGAGTGGG...CACTCTGATGATGCTCACTGCATTTTGATGGAGTAAGCCAGGGACATTACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCGCTGTAGAGGGAGTCTaGGTATTAGCTTTGCTACAA +
Preference number: 4 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISAVEGV*VLALLQ
Trigger: TTGTAGCAAAGCTAATACTCAGACTCCCTCTACAGC...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTCCTCACTGCCACCTCTaGCTCCTGGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICPHCHL*LLGSSD
Trigger: ATCGCTTGAACCCAGGAGGCAGAGGTGGCAGTGAGG...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTGCTCGCATGGGTGACTaGTCTTTTAAAGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LALAFISLPKLQQIAESCARMGD*SFKGSS
Trigger: TGAGCTACCTTTAAAAGAGCAGTCACCCATGCGAGC...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCAAGAAGCGCCAAAGTTaGCCACCCAGAGGCCGCATA +
Preference number: 4 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSKKRQS*PPRGRI
Trigger: TATGCGGCCTCTGGGTGGCCAACTTTGGCGCTTCTT...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCATGTCCTTCCACAGGTaGGCTCTTCACTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCMSFHR*ALHWLH
Trigger: GTGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACAT...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCAGTCCCACAGCTATTTaGGCAAGGGCCCAAGACGAT +
Preference number: 4 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSSPTAI*ARAQDD
Trigger: ATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACT...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGGGCAGCAGAATCACTTaGACCAGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTEGSRIT*TREVEV
Trigger: AACCTCCACCTCCCTGGTTCAAGTGATTCTGCTGCC...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACAGTTCTGACAGGGAGTaGCAGTCGTCTTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHSSDRE*QSSLTK
Trigger: TTTTGTCAAAGACGACTGTCACTCCCTGTCAGAACT...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTGGTATTCCGCAATGTTaGCGTCGTCAATCAATCAGT +
Preference number: 4 (lower is better)
Translates to: LALAFISLPKLQQIAESCGIPQC*RRQSIS
Trigger: ACTGATTGATTGACGACGTCAACATTGCGGAATACC...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTTGGAGTGCAGTGGCATaGCCTCAGCTCAGTGCAATC +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRWSAVA*PQLSAI
Trigger: GATTGCACTGAGCTGAGGTCATGCCACTGCACTCCA...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGGTAATACACTCTGTATaGTCTGGCCACTTGATCGAC +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKVIHSV*SGHLID
Trigger: GTCGATCAAGTGGCCAGAGCATACAGAGTGTATTAC...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TCCAACCTGAATAACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGTTAGCAAGAGAATACTaGATCCAGCAACACTGCTTT +
Preference number: 4 (lower is better)
Translates to: SNLNNATLCLRMGREAWRLAREY*IQQHCF
Trigger: AAAGCAGTGTTGCTGGATGCAGTATTCTCTTGCTAA...CCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTTATTCAGGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAACGATGGCGCAATCTTaGCTCACTGCCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPTMAQS*LTATSA
Trigger: GGCAGAGGTGGCAGTGAGGCAAGATTGCGCCATCGT...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCAGCCAACAAGGAATGTaGCCACTCTCCCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCSQQGM*PLSPSV
Trigger: AACTGAAGGGGAGAGTGGGCACATTCCTTGTTGGCT...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTAAGAAGCGCCAAAGTTaGCCACCCAGAGGCCGCATA +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICKKRQS*PPRGRI
Trigger: TATGCGGCCTCTGGGTGGCCAACTTTGGCGCTTCTT...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCAGGTGGGCTCTTCACTaGCTTCACTTCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCRWALH*LHFSLI
Trigger: GATCAAGCTGAAGTGAAGCCAGTGAAGAGCCCACCT...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCATTCAGCTCTGGGTCTaGGGAACTGCACTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCIQLWV*GTALQQ
Trigger: TTGCTGAAGTGCAGTTCCCCAGACCCAGAGCTGAAT...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAAAAGTACAAACTAATTaGGTAACAAATGCTCGCATG +
Preference number: 4 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQKVQTN*VTNARM
Trigger: CATGCGAGCATTTGTTACCCAATTAGTTTGTACTTT...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp AGTGGTAATGTCCCTGGCTTACTCCATCAAAATGCAGTGAGCATCATCAGAGTGGTCACATGTATGACATaGAGACAACACATCCCCACA +
Preference number: 4 (lower is better)
Translates to: SGNVPGLLHQNAVSIIRVVTCMT*RQHIPT
Trigger: TGTGGGGATGTGTTGTCTCCATGTCATACATGTGAC...CACTCTGATGATGCTCACTGCATTTTGATGGAGTAAGCCAGGGACATTACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTATTTTCTTCAATGGCTaGCACACCAAAAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LALAFISLPKLQQIAESCIFFNG*HTKRRV
Trigger: GACCCTTCTTTTGGTGTGTCAGCCATTGAAGAAAAT...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTCCCTGTTCTCCTAGTATCATACTTCATCCTAACACAATTATTCCTGTTTTACGCATTCCAGCCTGCGTaGGAAGAGCGAGACTCCATC +
Preference number: 4 (lower is better)
Translates to: FPVLLVSYFILTQLFLFYAFQPA*EERDSI
Trigger: GATGGAGTCTCGCTCTTCTCACGCAGGCTGGAATGC...GTAAAACAGGAATAATTGTGTTAGGATGAAGTATGATACTAGGAGAACAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAATGCATCATAGCTCCTTaGAATCAAAGGACCAAATTA +
Preference number: 4 (lower is better)
Translates to: WPLTFASSLNGKRITGCQCIIAP*NQRTKL
Trigger: TAATTTGGTCCTTTGATTTCAAGGAGCTATGATGCA...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCTCCATCAAAATGCAGTaGGCATCATCAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCSIKMQ*ASSEWS
Trigger: GGACCACTCTGATGATGCTCACTGCATTTTGATGGA...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTCTGTCTCTCCCTGCTTTTTaGTCATATTATAACAACTCG +
Preference number: 4 (lower is better)
Translates to: EHLEDVTSKVPFPTSNILSLPAF*SYYNNS
Trigger: CGAGTTGTTATAATATGATCAAAAAGCAGGGAGAGA...CAGAATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTGCTTTCTTTCAAGACTaGCTTTTGCAGGGACTCTTT +
Preference number: 4 (lower is better)
Translates to: LALAFISLPKLQQIAESCAFFQD*LLQGLF
Trigger: AAAGAGTCCCTGCAAAAGGCAGTCTTGAAAGAAAGC...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCCTGAGAGCTGTCCAATaGATTCTCCACATCACAGAC +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCLRAVQ*ILHITD
Trigger: GTCTGTGATGTGGAGAATGCATTGGACAGCTCTCAG...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCATGGAATGTAATCCTTaGAGGGCTCTCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSMECNP*RALCPT
Trigger: AGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCAT...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCCCTTACCAGGTTTGGTaGCTAAAACAACAGACATTT +
Preference number: 4 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISPYQVW*LKQQTF
Trigger: AAATGTCTGTTGTTTTAGCCACCAAACCTGGTAAGG...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTCTCTGGAAGCTCTCCTaGCACCCCCTTCTGAATTAC +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICLWKLS*HPLLNY
Trigger: GTAATTCAGAAGGGGGTGCCAGGAGAGCTTCCAGAG...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TGGCCCCTTACCTTTGCATCATCCTTGAATGGAAAAAGGATCACGGGCTGCCAACCTCTACTTTTCTTTTaGAGTTATAGGGTGCAAACA +
Preference number: 4 (lower is better)
Translates to: WPLTFASSLNGKRITGCQPLLFF*SYRVQT
Trigger: TGTTTGCACCCTATAACTCCAAAAGAAAAGTAGAGG...TTGGCAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTGCTGAGAACGAAGACTaGATCTTATCTAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: LALAFISLPKLQQIAESCAENED*ILSKSK
Trigger: TTTGCTCTTAGATAAGATTCAGTCTTCGTTCTCAGC...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp AGTGGTAATGTCCCTGGCTTACTCCATCAAAATGCAGTGAGCATCATCAGAGTGACATCAATGTTCTCATaGAATAGTGCACAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SGNVPGLLHQNAVSIIRVTSMFS*NSAQSQ
Trigger: CTGACTCTGTGCACTATTTCATGAGAACATTGATGT...CACTCTGATGATGCTCACTGCATTTTGATGGAGTAAGCCAGGGACATTACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGCCAACAGAGATCAAATaGTCCTCAATCAGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKPTEIK*SSIRFQ
Trigger: TTGAAACCTGATTGAGGATCATTTGATCTCTGTTGG...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGTTCTTCCCCTGGATCTaGGTCATTATTACATTGATT +
Preference number: 4 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGFFPWI*VIITLI
Trigger: AATCAATGTAATAATGACTCAGATCCAGGGGAAGAA...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCATGGAAGCAGGTCTCTaGATCATACTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCMEAGL*IILQIQ
Trigger: CTGAATCTGCAGTATGATGCAGAGACCTGCTTCCAT...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTTGGAGCCTGAGAAGCTaGATTTCTGCTAAGTACCCC +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICWSLRS*ISAKYP
Trigger: GGGGTACTTAGCAGAAATGCAGCTTCTCAGGCTCCA...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCAGTCTCTCAGTCTATTaGATCAGTGGTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCSLSVY*ISGSQQ
Trigger: CTGCTGAGAACCACTGATGCAATAGACTGAGAGACT...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTAGCCATACAAAGGCCTaGCCTGCTTCGGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFSHTKA*PASGTE
Trigger: TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCT...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGCTGGGGTATCTGTCATaGAAGCAGGTCTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTELGYLS*KQVSAS
Trigger: TGATGCAGAGACCTGCTTCCATGACAGATACCCCAG...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCTGGCTGTTTTCTCTCTaGCTTCTCATGGTCGTCTCA +
Preference number: 4 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSWLFSL*LLMVVS
Trigger: TGAGACGACCATGAGAAGCCAGAGAGAAAACAGCCA...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCCACAGTTCTGGAGCTTaGAAGGCAAAAATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCHSSGA*KAKIKE
Trigger: CTCCTTGATTTTTGCCTTCCAAGCTCCAGAACTGTG...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTAAAACGTTGCCCCACTaGCATACGGAACCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRKTLPH*HTEPPF
Trigger: AAACGGAGGTTCCGTATGCCAGTGGGGCAACGTTTT...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTCTGCCTTTTCTTTCTTaGCGTGCTTCATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICLPFLS*RASFQP
Trigger: TGGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAG...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCATTACGCTCCCCAGTATaGGTTGTGAGGGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPLRSPV*VVRENG
Trigger: ACCGTTTTCCCTCACAACTCATACTGGGGAGCGTAA...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCCATGTGTGTGGCAATTaGAGCAGCTATTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSHVCGN*SSYFSL
Trigger: AAGGGAGAAATAGCTGCTTCAATTGCCACACACATG...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCAATGTTCTCATGGTATaGAGGCCATTCTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCNVLMV*RPFCRV
Trigger: CACTCTACAGAATGGCCTTCATACCATGAGAACATT...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTGCAGAGACCCTAATCTaGCTGTTATTAGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRAETLI*LLLATK
Trigger: CTTGGTGGCTAATAACAGTCAGATTAGGGTCTCTGC...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCCATTTGGTATGTCACTaGAAACCTGGCACACCACTT +
Preference number: 4 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSHLVCH*KPGTPL
Trigger: AAGTGGTGTGCCAGGTTTTCAGTGACATACCAAATG...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCATTTTCTTCAATGGCTaGCACACCAAAAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LYRLLCETVSFLLAREYCIFFNG*HTKRRV
Trigger: GACCCTTCTTTTGGTGTGTCAGCCATTGAAGAAAAT...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCGAACAGCCAGACACATaGATACATTCATGCCTACTG +
Preference number: 4 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSEQPDT*IHSCLL
Trigger: CAGTAGGCATGAATGTATTCATGTGTCTGGCTGTTC...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp AGAACGAAGACTGAATCTTATCTAAGAGCAAACTTGCTGCAAAGGGATCCACACATATCAGCTGCTTCATaGACAGCCAGACACATGAAT +
Preference number: 4 (lower is better)
Translates to: RTKTESYLRANLLQRDPHISAAS*TARHMN
Trigger: ATTCATGTGTCTGGCTGTTCATGAAGCAGCTGATAT...GTGTGGATCCCTTTGCAGCAAGTTTGCTCTTAGATAAGATTCAGTCTTCGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAGGGTTGTGTCTTCCTTaGACTGGGTGCAAACATGGA +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPGLCLP*TGCKHG
Trigger: TCCATGTTTGCACCCAGTTCAAGGAAGACACAACCC...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTTTGCCCAGGCTGGAATaGAGTGGTGTGATTATAGCT +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICLPRLE*SGVIIA
Trigger: AGCTATAATCACACCACTGCATTCCAGCCTGGGCAA...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTGCAGCTGAAAAACGTTaGCCCACTGGCATACGGAAC +
Preference number: 4 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFAAEKR*PTGIRN
Trigger: GTTCCGTATGCCAGTGGGGCAACGTTTTTCAGCTGC...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp AGAACGAAGACTGAATCTTATCTAAGAGCAAACTTGCTGCAAAGGGATCCACACCCCCTGGCAATCATTTaGCACTGCAATATTATTAGG +
Preference number: 4 (lower is better)
Translates to: RTKTESYLRANLLQRDPHPLAII*HCNIIR
Trigger: CCTAATAATATTGCAGTGGCAAATGATTGCCAGGGG...GTGTGGATCCCTTTGCAGCAAGTTTGCTCTTAGATAAGATTCAGTCTTCGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TTCCCTGTTCTCCTAGTATCATACTTCATCCTAACACAATTATTCCTGTTTTACATGTCCTTCCACAGGTaGGCTCTTCACTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: FPVLLVSYFILTQLFLFYMSFHR*ALHWLH
Trigger: GTGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACAT...GTAAAACAGGAATAATTGTGTTAGGATGAAGTATGATACTAGGAGAACAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTCGGGTTTCTCCATGTTaGTCAGGCCAGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFRVSPC*SGQSRT
Trigger: AGTTCGAGACTGGCCTGACCAACATGGAGAAACCCG...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCATACAGAGCTCAGCCTTaGCCCCTTACCTTTGCATCA +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPYRAQP*PLTFAS
Trigger: TGATGCAAAGGTAAGGGGCCAAGGCTGAGCTCTGTA...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTTTTAGGTGCACTAGTTaGCACTTTGGGGCCTCATGT +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRFRCTS*HFGASC
Trigger: ACATGAGGCCCCAAAGTGCCAACTAGTGCACCTAAA...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 72 bp AAACAACAGACATTTATTTCCTCACAGTTCTGGAGCTaGGAAGGCAAAAATCAAGGAGTCAGCAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: KQQTFISSQFWS*EGKNQGVSRVC
Trigger: ACAAACCCTGCTGACTCCTTGATTTTTGCCTTCCAAGCTCCAGAACTGTGAGGAAATAAATGTCTGTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
3UTR CAA 72 bp GATCAAATGATCCTCAATCAGGTTTCAATTGAGTATTaGAGAATGCCTACATGGAAAGACTGCACTGAGCCC +
Preference number: 4 (lower is better)
Translates to: DQMILNQVSIEY*RMPTWKDCTEP
Trigger: GGGCTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATTGAGGATCATTTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAGCAGAGACCCTAATCTaGCTGTTATTAGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPAETLI*LLLATK
Trigger: CTTGGTGGCTAATAACAGTCAGATTAGGGTCTCTGC...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTTTCAAGCATCAACTCTaGATGGCAGAGACCCTAATC +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRFKHQL*MAETLI
Trigger: GATTAGGGTCTCTGCCATTCAGAGTTGATGCTTGAA...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp AGAACGAAGACTGAATCTTATCTAAGAGCAAACTTGCTGCAAAGGGATCCACACTCAGCATCACACTCGTaGTCAATATCCTCTTATTTC +
Preference number: 4 (lower is better)
Translates to: RTKTESYLRANLLQRDPHSASHS*SISSYF
Trigger: GAAATAAGAGGATATTGATCACGAGTGTGATGCTGA...GTGTGGATCCCTTTGCAGCAAGTTTGCTCTTAGATAAGATTCAGTCTTCGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGAAGTGCGCAGTTCAGTaGGTTTTCACAGATGTATGC +
Preference number: 4 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTEKCAVQ*VFTDVC
Trigger: GCATACATCTGTGAAAACTCACTGAACTGCGCACTT...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTGTAATACACTCTGTATaGTCTGGCCACTTGATCGAC +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICVIHSV*SGHLID
Trigger: GTCGATCAAGTGGCCAGAGCATACAGAGTGTATTAC...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGGGCCATTCTGTAGAGTaGACGTATATATGTTTATAT +
Preference number: 4 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKGHSVE*TYICLY
Trigger: ATATAAACATATATACGTGCACTCTACAGAATGGCC...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTATGGAAGCAGGTCTCTaGATCATACTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICMEAGL*IILQIQ
Trigger: CTGAATCTGCAGTATGATGCAGAGACCTGCTTCCAT...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR GCA 90 bp AGAACGAAGACTGAATCTTATCTAAGAGCAAACTTGCTGCAAAGGGATCCACACGCAATCATTTGCCACTaGAATATTATTAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RTKTESYLRANLLQRDPHAIICH*NIIRPV
Trigger: CACAGGCCTAATAATATTGCAGTGGCAAATGATTGC...GTGTGGATCCCTTTGCAGCAAGTTTGCTCTTAGATAAGATTCAGTCTTCGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGTGCATCATCCTTGAATaGAAAAAGGATCACGGGCTG +
Preference number: 4 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTECIILE*KKDHGL
Trigger: CAGCCCGTGATCCTTTTTCCATTCAAGGATGATGCA...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTTTTCCCCTTCCCTATTaGGTAAAAATTAATAGACTC +
Preference number: 4 (lower is better)
Translates to: LALAFISLPKLQQIAESCFPLPY*VKINRL
Trigger: GAGTCTATTAATTTTTACCCAATAGGGAAGGGGAAA...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGAAACAGCCTTGCTTTTaGTTTCCCAAGATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTEKQPCF*FPKICS
Trigger: GCTGCAAATCTTGGGAAATCAAAAGCAAGGCTGTTT...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTCAATCAATCAGTGAATaGCTGTCTTGTGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRQSISE*LSCAVI
Trigger: GATCACAGCACAAGACAGTCATTCACTGATTGATTG...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTATGGCCTCATGTGTGTaGCAATTGAAGCAGCTATTT +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICMASCV*QLKQLF
Trigger: AAATAGCTGCTTCAATTGCCACACACATGAGGCCAT...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTTCTTGGCTTGTAAGATaGCTGTTTTCTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICSWLVR*LFSLWL
Trigger: AAGCCAGAGAGAAAACAGCCATCTTACAAGCCAAGA...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTATAAACAGGAACATCTaGAAGACGTCACCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRINRNI*KTSPLR
Trigger: CCTTAGAGGTGACGTCTTCCAGATGTTCCTGTTTAT...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAGTGTCTTCCTTGAACTaGGTGCAAACATGGACAAAG +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPVSSLN*VQTWTK
Trigger: CTTTGTCCATGTTTGCACCCAGTTCAAGGAAGACAC...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTTCAGCATCACACTCGTaGTCAATATCCTCTTATTTC +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICSASHS*SISSYF
Trigger: GAAATAAGAGGATATTGATCACGAGTGTGATGCTGA...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR TCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTCCTCATGTTGAAGATTaGAAGGAAATACCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICPHVED*KEIPPS
Trigger: ACTTGGAGGTATTTCCTTTCAATCTTCAACATGAGG...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTATCACTGAAGCTTGCTaGTGGGTACATCAATTAGTT +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICITEAC*WVHQLV
Trigger: AACTAATTGATGTACCCATCAGCAAGCTTCAGTGAT...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTGTACAATCCAGTATATaGAGAAAGGTACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRVQSSI*RKVLSI
Trigger: GATGCTGAGTACCTTTCTGCATATACTGGATTGTAC...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR GCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCATTGGCCCCTTACCTTTaGATCATCCTTGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPLAPYL*IILEWK
Trigger: TTTCCATTCAAGGATGATGCAAAGGTAAGGGGCCAA...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAATGGCCTCATGTGTGTaGCAATTGAAGCAGCTATTT +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPMASCV*QLKQLF
Trigger: AAATAGCTGCTTCAATTGCCACACACATGAGGCCAT...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CCA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTGAAGCCTTGAATTCCTaGGCTCAAGTGATACTCCAT +
Preference number: 4 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFEALNS*AQVILH
Trigger: ATGGAGTATCACTTGAGCCCAGGAATTCAAGGCTTC...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTCATCAGGGCAATGAGTaGAGCCAAAATAAATCAATA +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRHQGNE*SQNKSI
Trigger: TATTGATTTATTTTGGCTTCACTCATTGCCCTGATG...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTAGTGACAGTCGTCTTTaGCAAAAATTTCAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICSDSRL*QKFQKW
Trigger: CCACTTTTGAAATTTTTGTCAAAGACGACTGTCACT...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR TCA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTAACTTAGTTGATACATaGAGGCCAAGTTCAAATCCT +
Preference number: 4 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRNLVDT*RPSSNP
Trigger: AGGATTTGAACTTGGCCTTCATGTATCAACTAAGTT...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577335.2
CDS-3UTR TCA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCACATCAGGGCAATGAGTaGAGCCAAAATAAATCAATA +
Preference number: 4 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPHQGNE*SQNKSI
Trigger: TATTGATTTATTTTGGCTTCACTCATTGCCCTGATG...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR TCA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTCTGACATATTTACATTaGGTCTTCTCACCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFLTYLH*VFSPRN
Trigger: GTTCCTTGGTGAGAAGACTCAATGTAAATATGTCAG...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTGTAGGCATTGATTTTTaGATATTTACAACTGGATGC +
Preference number: 4 (lower is better)
Translates to: TEMFSWYEGHSVECTYICVGIDF*IFTTGC
Trigger: GCATCCAGTTGTAAATATGCAAAAATCAATGCCTAC...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTCCCTGTTCTCCTAGTATCATACTTCATCCTAACACAATTATTCCTGTTTTACACCCAGGTAAAGATTTaGAAGGGATATTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: FPVLLVSYFILTQLFLFYTQVKI*KGYFTE
Trigger: TTCAGTGAAATATCCCTTGCAAATCTTTACCTGGGT...GTAAAACAGGAATAATTGTGTTAGGATGAAGTATGATACTAGGAGAACAGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR GCA 90 bp TTCCCTGTTCTCCTAGTATCATACTTCATCCTAACACAATTATTCCTGTTTTACAAACAAAAACCTTTTTaGTGTGCTGATGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: FPVLLVSYFILTQLFLFYKQKPF*CADETV
Trigger: CACAGTTTCATCAGCACAGCAAAAAGGTTTTTGTTT...GTAAAACAGGAATAATTGTGTTAGGATGAAGTATGATACTAGGAGAACAGGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCACGCCACGCCTCCGCTaGCCGCGCGCAGAACTGCCT +
Preference number: 5 (lower is better)
Translates to: GTALQQASHPPARWSLWVTPRLR*PRAELP
Trigger: AGGCAGTTCTGCGCGCGGCAAGCGGAGGCGTGGCGT...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CAA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCCAAGAAGCGCCAAAGTaGGCCACCCAGAGGCCGCAT +
Preference number: 5 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSQEAPK*ATQRPH
Trigger: ATGCGGCCTCTGGGTGGCCAACTTTGGCGCTTCTTG...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCCCCCCAAGTAAAGGCTaGCCGATGTGTCGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSPPSKG*PMCRCR
Trigger: ACGGCAGCGACACATCGGCAAGCCTTTACTTGGGGG...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCCCCCAAGTAAAGGCTaGCCGATGTGTCGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: WVWGTALQQASHPPARWSPPSKG*PMCRCR
Trigger: ACGGCAGCGACACATCGGCAAGCCTTTACTTGGGGG...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CAA 90 bp AGACACTGTCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTACGCCACGCCTCCGCTaGCCGCGCGCAGAACTGCCT +
Preference number: 5 (lower is better)
Translates to: RHCLWGLSVATLLCHTTPTPRLR*PRAELP
Trigger: AGGCAGTTCTGCGCGCGGCAAGCGGAGGCGTGGCGT...AGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCCAGTCCCACAGCTATTaGAGCAAGGGCCCAAGACGA +
Preference number: 5 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSQSHSY*SKGPRR
Trigger: TCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTG...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCTACGATGGCGCAATCTaGCCTCACTGCCACCTCTGC +
Preference number: 5 (lower is better)
Translates to: GTALQQASHPPARWSLWVYDGAI*PHCHLC
Trigger: GCAGAGGTGGCAGTGAGGCAAGATTGCGCCATCGTA...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TGGGTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCAGAGTGGTCCGGAGCTaGACTGACAACGACCAGCTG +
Preference number: 5 (lower is better)
Translates to: WVWGTALQQASHPPARWSRVVRS*TDNDQL
Trigger: CAGCTGGTCGTTGTCAGTCAAGCTCCGGACCACTCT...GCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCCCTTGGTATGACCTCTaGAGACCAGGAGGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSPWYDL*RPGGSH
Trigger: GTGAGAGCCTCCTGGTCTCAAGAGGTCATACCAAGG...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCAGGTCCTCACGAAACCTaGGTGGCCAAGGCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: GCASPRHVLPQVGSSLASGPHET*VAKALG
Trigger: ACCAAGGGCCTTGGCCACCAAGGTTTCGTGAGGACC...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCACAGTCCCACAGCTATTaGAGCAAGGGCCCAAGACGA +
Preference number: 5 (lower is better)
Translates to: GCASPRHVLPQVGSSLASQSHSY*SKGPRR
Trigger: TCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTG...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGCCAAGCTACAGCAAATaGCTGAGAGCTGTCCAATGC +
Preference number: 5 (lower is better)
Translates to: VWGTALQQASHPPARWSLPSYSK*LRAVQC
Trigger: GCATTGGACAGCTCTCAGCAATTTGCTGTAGCTTGG...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GAGGGCCTGTTCGCAGGCAGGAATGCACTGGCTGTGCCTCGCCCCGCCATGTCCTCATGTGTGTGGCAATaGAAGCAGCTATTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: EGLFAGRNALAVPRPAMSSCVWQ*KQLFLP
Trigger: AGGGAGAAATAGCTGCTTCAATTGCCACACACATGA...GGACATGGCGGGGCGAGGCACAGCCAGTGCATTCCTGCCTGCGAACAGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp AATTCAGTCCCACAGCTATTTGAGCAAGGGCCCAAGACGATGGAGAGGCGGCAAGTAATCCCCAGTACTTaGGGAGGCCAAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: NSVPQLFEQGPKTMERRQVIPST*GGQGGW
Trigger: CCACCCGCCTTGGCCTCCCAAAGTACTGGGGATTAC...TTGCCGCCTCTCCATCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCGAGAGACTCTTCAAATaGTGTTTCATGGGAGCGAAA +
Preference number: 5 (lower is better)
Translates to: GTALQQASHPPARWSLWVERLFK*CFMGAK
Trigger: TTTCGCTCCCATGAAACACAATTTGAAGAGTCTCTC...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GTCTGGGGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTTTACTGAAAAACTTTaGGAGAACTTTGCCCCTAGG +
Preference number: 5 (lower is better)
Translates to: VWGTALQQASHPPARWSLFTEKL*ENFAPR
Trigger: CCTAGGGGCAAAGTTCTCCAAAAGTTTTTCAGTAAA...CAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCCCCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CAA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAAACTCTCCCCTTCAGTTaGCTCCTCCTCAGTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LVQGKVSHTKACPASGTETLPFS*LLLSVR
Trigger: CCTGACACTGAGGAGGAGCAAACTGAAGGGGAGAGT...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GGCTGTGCCTCGCCCCGCCATGTCCTTCCACAGGTGGGCTCTTCACTGGCTTCAAAGAATCAATTTTGGTaGAACGCAAGGGTAACATCC +
Preference number: 5 (lower is better)
Translates to: GCASPRHVLPQVGSSLASKNQFW*NARVTS
Trigger: GGATGTTACCCTTGCGTTCAACCAAAATTGATTCTT...TGAAGCCAGTGAAGAGCCCACCTGTGGAAGGACATGGCGGGGCGAGGCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp AAGGGATGGTCCCAGTCCGCCAGCATCCGAGTCACCTGGGGTATCTGTCATGGAACTGAGCAAACTTCTTaGCCTCTCAAAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: KGWSQSASIRVTWGICHGTEQTS*PLKAVA
Trigger: TGCCACAGCTTTGAGAGGCAAAGAAGTTTGCTCAGT...TCCATGACAGATACCCCAGGTGACTCGGATGCTGGCGGACTGGGACCATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GGAACTGCACTTCAGCAAGCGTCCCACCCACCTGCCCGCTGGAGCCTGTGGGTCACTGACATATTTACATaGAGTCTTCTCACCAAGGAA +
Preference number: 5 (lower is better)
Translates to: GTALQQASHPPARWSLWVTDIFT*SLLTKE
Trigger: TTCCTTGGTGAGAAGACTCAATGTAAATATGTCAGT...GACCCACAGGCTCCAGCGGGCAGGTGGGTGGGACGCTTGCTGAAGTGCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp CTGGTACAGGGAAAAGTGAGCCATACAAAGGCCTGCCCTGCTTCGGGCACTGAAAACTTTTGGAGAACTTaGCCCCTAGGGCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LVQGKVSHTKACPASGTENFWRT*PLGQQL
Trigger: AAGCTGCTGCCCTAGGGGCAAAGTTCTCCAAAAGTT...TTCAGTGCCCGAAGCAGGGCAGGCCTTTGTATGGCTCACTTTTCCCTGTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp AGACACTGTCTCTGGGGCCTAAGTGTGGCTACTCTGCTCTGCCACACCACACCTGAACCTCCGTTTTGGTaGGATTCACACAGTCACCAT +
Preference number: 5 (lower is better)
Translates to: RHCLWGLSVATLLCHTTPEPPFW*DSHSHH
Trigger: ATGGTGACTGTGTGAATCCAACCAAAACGGAGGTTC...AGGTGTGGTGTGGCAGAGCAGAGTAGCCACACTTAGGCCCCAGAGACAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS GCA 90 bp CTTCCAGGAAACAGGCTTGTCTGGCCGACTTTGTCAACCTCGTCCTaGCGGCCAAGAGGAAGTGCCAGAATGTTGACTCCTTTACATCTT +
Preference number: 5 (lower is better)
Translates to: LPGNRLVWPTLSTSS*RPRGSARMLTPLHL
Trigger: AAGATGTAAAGGAGTCAACATTCTGGCACTTCCTCTTGGCCGGCAGGACGAGGTTGACAAAGTCGGCCAGACAAGCCTGTTTCCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS-3UTR CAA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACCAAGAAGCGCCAAAGTaGGCCACCCAGAGGCCGCAT +
Preference number: 5 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHQEAPK*ATQRPH
Trigger: ATGCGGCCTCTGGGTGGCCAACTTTGGCGCTTCTTG...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp CAGGAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTCAGTCCCACAGCTATTaGAGCAAGGGCCCAAGACGA +
Preference number: 5 (lower is better)
Translates to: QEHLEDVTSKVPFPTSNIQSHSY*SKGPRR
Trigger: TCGTCTTGGGCCCTTGCTCAAATAGCTGTGGGACTG...AATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp ACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGGAGGGTTGTCTTTCCCTCACGCCCGGCTAACTTaGGTATTTTTAGTAGAGACG +
Preference number: 5 (lower is better)
Translates to: TLCLRMGREAWRGGLSFPHARLT*VFLVET
Trigger: CGTCTCTACTAAAAATACCAAAGTTAGCCGGGCGTG...AGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCGCTTGGCGGGGAGGGTaGTCTTTCCCTAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LYRLLCETVSFLLAREYCAWRGG*SFPRVV
Trigger: CACAACCCTAGGGAAAGACAACCCTCCCCGCCAAGC...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp ACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGGGAGGGTTGTCTTTCCCTCTCACAACTTCTCTCTaGGCTTGTAAGATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: TLCLRMGREAWRGGLSFPLTTSL*ACKMAV
Trigger: AACAGCCATCTTACAAGCCAAGAGAGAAGTTGTGAG...AGGGAAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS TCA 90 bp CTTTGTCAACCTCGTCCTGCCGGCCAAGAGGAAGTGCCAGAATGTTaGCTCCTTTACATCTTTGAAATAGAAACCGACCCATTGCGATTG +
Preference number: 5 (lower is better)
Translates to: LCQPRPAGQEEVPEC*LLYIFEIETDPLRL
Trigger: CAATCGCAATGGGTCGGTTTCTATTTCAAAGATGTAAAGGAGTCAACATTCTGGCACTTCCTCTTGGCCGGCAGGACGAGGTTGACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS-3UTR CAA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTCAAGAAGCGCCAAAGTaGGCCACCCAGAGGCCGCAT +
Preference number: 5 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRQEAPK*ATQRPH
Trigger: ATGCGGCCTCTGGGTGGCCAACTTTGGCGCTTCTTG...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGTCTGCCTTTTCTTTCTaGACGTGCTTCATTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGSAFSF*TCFIPA
Trigger: GGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAGA...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CAA 90 bp AGTGGTAATGTCCCTGGCTTACTCCATCAAAATGCAGTGAGCATCATCAGAGTGTCCGAGACTGTCCCCTaGTGCATAAACAGGAACATC +
Preference number: 5 (lower is better)
Translates to: SGNVPGLLHQNAVSIIRVSETVP*CINRNI
Trigger: GATGTTCCTGTTTATGCACAAGGGGACAGTCTCGGA...CACTCTGATGATGCTCACTGCATTTTGATGGAGTAAGCCAGGGACATTACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACATTGGGACCCGAGTTTaGCGCCTTAATTCTCCGAGA +
Preference number: 5 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHIGTRV*RLNSPR
Trigger: TCTCGGAGAATTAAGGCGCAAAACTCGGGTCCCAAT...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTTTTTTGAGACAACTCTaGTTGCCCAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: LALAFISLPKLQQIAESCFLRQL*LPRLEC
Trigger: GCACTCCAGCCTGGGCAACAAGAGTTGTCTCAAAAA...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GAAATAGTGCACAGAGTCAGTGACTTTAAGGCCCCTTATGAGGGGGACATTAGCTCATGTGTGTGGCAATaGAAGCAGCTATTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: EIVHRVSDFKAPYEGDISSCVWQ*KQLFLP
Trigger: AGGGAGAAATAGCTGCTTCAATTGCCACACACATGA...GCTAATGTCCCCCTCATAAGGGGCCTTAAAGTCACTGACTCTGTGCACTATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GAATGGAATGTAATCCTTGCAGGGCTCTCTGCCCCACTTTCTTCTGTAACTAAGTACGGAACCTCCGTTTaGGTTGGATTCACACAGTCA +
Preference number: 5 (lower is better)
Translates to: EWNVILAGLSAPLSSVTKYGTSV*VGFTQS
Trigger: TGACTGTGTGAATCCAACCAAAACGGAGGTTCCGTA...CTTAGTTACAGAAGAAAGTGGGGCAGAGAGCCCTGCAAGGATTACATTCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GAACATCTGGAAGACGTCACCTCTAAGGTCCCCTTCCCCACTTCTAACATTCTGAAGAATCAATTTTGGTaGAACGCAAGGGTAACATCC +
Preference number: 5 (lower is better)
Translates to: EHLEDVTSKVPFPTSNILKNQFW*NARVTS
Trigger: GGATGTTACCCTTGCGTTCAACCAAAATTGATTCTT...CAGAATGTTAGAAGTGGGGAAGGGGACCTTAGAGGTGACGTCTTCCAGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TCCAACCTGAATAACGCCACCCTATGTTTAAGAATGGGAAGAGAGGCTTGGCGGTTTACTGAAAAACTTTaGGAGAACTTTGCCCCTAGG +
Preference number: 5 (lower is better)
Translates to: SNLNNATLCLRMGREAWRFTEKL*ENFAPR
Trigger: CCTAGGGGCAAAGTTCTCCAAAAGTTTTTCAGTAAA...CCGCCAAGCCTCTCTTCCCATTCTTAAACATAGGGTGGCGTTATTCAGGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACGCTGCTGTTCCCTTTTaGGATCATTTCACAAGCCTT +
Preference number: 5 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHAAVPF*DHFTSL
Trigger: AAGGCTTGTGAAATGATCCAAAAAGGGAACAGCAGC...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TCATGGAAGCAGGTCTCTGCATCATACTGCAGATTCAGTGAATTCAGCTCTGGGTTGATTTCCCAAGATTaGCAGCTGAAAAACGTTGCC +
Preference number: 5 (lower is better)
Translates to: SWKQVSASYCRFSEFSSGLISQD*QLKNVA
Trigger: GGCAACGTTTTTCAGCTGCAAATCTTGGGAAATCAA...CCCAGAGCTGAATTCACTGAATCTGCAGTATGATGCAGAGACCTGCTTCCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGCTACAGAGCTCAGCCTaGGCCCCTTACCTTTGCATC +
Preference number: 5 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTELQSSA*APYLCI
Trigger: GATGCAAAGGTAAGGGGCCAAGGCTGAGCTCTGTAG...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCCTGTGGTATTGGGGGTaGAGGAGAATCCATGTGCCT +
Preference number: 5 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSLWYWG*RRIHVP
Trigger: AGGCACATGGATTCTCCTCAACCCCCAATACCACAG...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTTCGGGCACTGAACGCTaGCCTGTCTCCGTTAGGAAT +
Preference number: 5 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRSGTER*PVSVRN
Trigger: ATTCCTAACGGAGACAGGCAAGCGTTCAGTGCCCGA...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS GCA 90 bp GTCTTCCTGGGTCCCAGTTTCTTAAAATACTCTCACGGACTCCCTTaGTCCCTACAGTTTCGTTATTTGAAGTTTGTTATGGGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VFLGPSFLKYSHGLP*SLQFRYLKFVMGSS
Trigger: TGAGGAACCCATAACAAACTTCAAATAACGAAACTGTAGGGAGCAAGGGAGTCCGTGAGAGTATTTTAAGAAACTGGGACCCAGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS-3UTR CAA 90 bp AGAACGAAGACTGAATCTTATCTAAGAGCAAACTTGCTGCAAAGGGATCCACACTCTGCCTTTTCTTTCTaGACGTGCTTCATTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RTKTESYLRANLLQRDPHSAFSF*TCFIPA
Trigger: GGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAGA...GTGTGGATCCCTTTGCAGCAAGTTTGCTCTTAGATAAGATTCAGTCTTCGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCTCTGCCTTTTCTTTCTaGACGTGCTTCATTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LYRLLCETVSFLLAREYCSAFSF*TCFIPA
Trigger: GGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAGA...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAAATGGGAAGAGAGGCTaGGCGGGGAGGGTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPNGKRG*AGRVVF
Trigger: AAAGACAACCCTCCCCGCCAAGCCTCTCTTCCCATT...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TTCAGTGAGTTTTCACAGATGTATGCAGTTGTGCAGCGACCACTACCAAGACACACCTTTGCATCATCCTaGAATGGAAAAAGGATCACG +
Preference number: 5 (lower is better)
Translates to: FSEFSQMYAVVQRPLPRHTFASS*NGKRIT
Trigger: CGTGATCCTTTTTCCATTCAAGGATGATGCAAAGGT...GTGTCTTGGTAGTGGTCGCTGCACAACTGCATACATCTGTGAAAACTCACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAAGGCAGCAGAATCACTaGAACCAGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPRQQNH*NQGGGG
Trigger: ACCTCCACCTCCCTGGTTCAAGTGATTCTGCTGCCT...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp CTGGCATTAGCTTTTATCTCTCTGCCCAAGCTACAGCAAATTGCTGAGAGCTGTACACTCAAAAGAGAGTaGAAGTTTAGGTGCACTAGT +
Preference number: 5 (lower is better)
Translates to: LALAFISLPKLQQIAESCTLKRE*KFRCTS
Trigger: ACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGT...ACAGCTCTCAGCAATTTGCTGTAGCTTGGGCAGAGAGATAAAAGCTAATGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCAAACTTTTGGAGAACTTaGCCCCTAGGGCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPNFWRT*PLGQQL
Trigger: AAGCTGCTGCCCTAGGGGCAAAGTTCTCCAAAAGTT...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CAA 90 bp ACAGAAATGTTCTCATGGTATGAAGGCCATTCTGTAGAGTGCACGTATATATGTTTTCAAGACTGCCTTTaGCAGGGACTCTTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: TEMFSWYEGHSVECTYICFQDCL*QGLFFP
Trigger: GGGGAAAAAGAGTCCCTGCAAAAGGCAGTCTTGAAA...ACATATATACGTGCACTCTACAGAATGGCCTTCATACCATGAGAACATTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS TCA 90 bp TGCCGGCCAAGAGGAAGTGCCAGAATGTTGACTCCTTTACATCTTTaGAATAGAAACCGACCCATTGCGATTGAAATAGTCTTTAACTTA +
Preference number: 5 (lower is better)
Translates to: CRPRGSARMLTPLHL*NRNRPIAIEIVFNL
Trigger: TAAGTTAAAGACTATTTCAATCGCAATGGGTCGGTTTCTATTTCAAAGATGTAAAGGAGTCAACATTCTGGCACTTCCTCTTGGCCGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS CCA 90 bp CTCCCTACAGTTTCGTTATTTGAAGTTTGTTATGGGTTCCTCATCTaGAACTGCTTATGTTCCTTGTTAATGAGGCCAAGAGCATTCGTA +
Preference number: 5 (lower is better)
Translates to: LPTVSLFEVCYGFLI*NCLCSLLMRPRAFV
Trigger: TACGAATGCTCTTGGCCTCATTAACAAGGAACATAAGCAGTTCCAGATGAGGAACCCATAACAAACTTCAAATAACGAAACTGTAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS-3UTR CAA 90 bp TTATATAGGCTCCTATGCGAGACAGTTTCCTTCCTCTTAGCAAGAGAATACTGCTTCCAAGAATCAATTTaGGTTGAACGCAAGGGTAAC +
Preference number: 5 (lower is better)
Translates to: LYRLLCETVSFLLAREYCFQESI*VERKGN
Trigger: GTTACCCTTGCGTTCAACCAAAATTGATTCTTGGAA...GCAGTATTCTCTTGCTAAGAGGAAGGAAACTGTCTCGCATAGGAGCCTATATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp GCAGAAAAAGGCCAAACCCAGGATTCTAGGGCAGTTAAATTTAGAAACAAAAGCTTCCAAGAATCAATTTaGGTTGAACGCAAGGGTAAC +
Preference number: 5 (lower is better)
Translates to: AEKGQTQDSRAVKFRNKSFQESI*VERKGN
Trigger: GTTACCCTTGCGTTCAACCAAAATTGATTCTTGGAA...GCTTTTGTTTCTAAATTTAACTGCCCTAGAATCCTGGGTTTGGCCTTTTTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255390.10
ENST00000577335.2
CDS-3UTR CAA 90 bp GTTTTCCCTGTTCTCCTAGTATCATACTTCATCCTAACACAATTATTCCTGTTTCTCCACATCACAGACTaGCTTTCTTTCAAGACTGCC +
Preference number: 5 (lower is better)
Translates to: VFPVLLVSYFILTQLFLFLHITD*LSFKTA
Trigger: GGCAGTCTTGAAAGAAAGCAAGTCTGTGATGTGGAG...AAACAGGAATAATTGTGTTAGGATGAAGTATGATACTAGGAGAACAGGGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS GCA 90 bp ACAGTTTCGTTATTTGAAGTTTGTTATGGGTTCCTCATCTGGAACTaGTTATGTTCCTTGTTAATGAGGCCAAGAGCATTCGTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: TVSLFEVCYGFLIWN*LCSLLMRPRAFVGF
Trigger: AAAACCTACGAATGCTCTTGGCCTCATTAACAAGGAACATAAGCAGTTCCAGATGAGGAACCCATAACAAACTTCAAATAACGAAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS-3UTR CAA 90 bp TTTACACAAAGTACAATCCAGTATATGCAGAAAGGTACTCAGCATCACACTCGTTTCCAAGAATCAATTTaGGTTGAACGCAAGGGTAAC +
Preference number: 5 (lower is better)
Translates to: FTQSTIQYMQKGTQHHTRFQESI*VERKGN
Trigger: GTTACCCTTGCGTTCAACCAAAATTGATTCTTGGAA...ACGAGTGTGATGCTGAGTACCTTTCTGCATATACTGGATTGTACTTTGTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
CDS-3UTR CAA 90 bp GTTTTCCCTGTTCTCCTAGTATCATACTTCATCCTAACACAATTATTCCTGTTTAAGATTATGCCATTATaGCATTCCAGCCTGCGTGAG +
Preference number: 5 (lower is better)
Translates to: VFPVLLVSYFILTQLFLFKIMPL*HSSLRE
Trigger: CTCACGCAGGCTGGAATGCAATAATGGCATAATCTT...AAACAGGAATAATTGTGTTAGGATGAAGTATGATACTAGGAGAACAGGGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp TGTGCCCAGCTAATCTATTATTTTAAGAACACCAGTCATATAGAATTAGGGCCACCCAGCCAACTGTGGTaGTTTTTAAAGGACAAAGTT +
Preference number: 5 (lower is better)
Translates to: CAQLIYYFKNTSHIELGPPSQLW*FLKDKV
Trigger: AACTTTGTCCTTTAAAAACAACCACAGTTGGCTGGG...TGGCCCTAATTCTATATGACTGGTGTTCTTAAAATAATAGATTAGCTGGGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp AATCAGGTTTCAATTGAGTATTTGAGAATGCCTACATGGAAAGACTGCACTGAGCTGCATCATAGCTCCTaGAAATCAAAGGACCAAATT +
Preference number: 5 (lower is better)
Translates to: NQVSIEYLRMPTWKDCTELHHSS*KSKDQI
Trigger: AATTTGGTCCTTTGATTTCAAGGAGCTATGATGCAG...CTCAGTGCAGTCTTTCCATGTAGGCATTCTCAAATACTCAATTGAAACCTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS-3UTR CAA 90 bp ATACATAAAACACTCAAAAGAGAGTTGAAGTTTAGGTGCACTAGTTGGCACTTTAGGTATTCCGCAATGTaGACGTCGTCAATCAATCAG +
Preference number: 5 (lower is better)
Translates to: IHKTLKRELKFRCTSWHFRYSAM*TSSINQ
Trigger: CTGATTGATTGACGACGTCAACATTGCGGAATACCT...AAAGTGCCAACTAGTGCACCTAAACTTCAACTCTCTTTTGAGTGTTTTATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255390.10
CDS TCA 72 bp CCTTCTGCGACCACGGGGGTGGCGGCCTCGCAGTGCTaGGGGGCCGGGTTCCCAGGCAATAGCCAGGGCGCC +
Preference number: 6 (lower is better)
Translates to: PSATTGVAASQC*GAGFPGNSQGA
Trigger: GGCGCCCTGGCTATTGCCTGGGAACCCGGCCCCTCAGCACTGCGAGGCCGCCACCCCCGTGGTCGCAGAAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
ENST00000579396.1
CDS GCA 72 bp GAGGCACGCCACGCCTCCGCTTGCCGCGCGCAGAACTaGCTCAGCAAGACTCTCGCAGTCCCCTCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: EARHASACRAQN*LSKTLAVPSAG
Trigger: CCCAGCCGAGGGGACTGCGAGAGTCTTGCTGAGGCAGTTCTGCGCGCGGCAAGCGGAGGCGTGGCGTGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
ENST00000579396.1
CDS CAA 72 bp ATAGCCAGGGCGCCCCGAGGCACGCCACGCCTCCGCTaGCCGCGCGCAGAACTGCCTCAGCAAGACTCTCGC +
Preference number: 6 (lower is better)
Translates to: IARAPRGTPRLR*PRAELPQQDSR
Trigger: GCGAGAGTCTTGCTGAGGCAGTTCTGCGCGCGGCAAGCGGAGGCGTGGCGTGCCTCGGGGCGCCCTGGCTAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
ENST00000579396.1
CDS CAA 90 bp TCCCAGGCAATAGCCAGGGCGCCCCGAGGCACGCCACGCCTCCGCTaGCCGCGCGCAGAACTGCCTCAGCAAGACTCTCGCAGTCCCCTC +
Preference number: 6 (lower is better)
Translates to: SQAIARAPRGTPRLR*PRAELPQQDSRSPL
Trigger: GAGGGGACTGCGAGAGTCTTGCTGAGGCAGTTCTGCGCGCGGCAAGCGGAGGCGTGGCGTGCCTCGGGGCGCCCTGGCTATTGCCTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
ENST00000579396.1
CDS CAA 72 bp CCAAAACTCGAGTCCGCGAGGCAAGAAGCGCCAAAGTaGGCCACCCAGAGGCCGCATAACTCGTCCGGGTAC +
Preference number: 6 (lower is better)
Translates to: PKLESARQEAPK*ATQRPHNSSGY
Trigger: GTACCCGGACGAGTTATGCGGCCTCTGGGTGGCCAACTTTGGCGCTTCTTGCCTCGCGGACTCGAGTTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
ENST00000579396.1
CDS CCA 72 bp CAAAACTCGAGTCCGCGAGGCAAGAAGCGCCAAAGTTaGCCACCCAGAGGCCGCATAACTCGTCCGGGTACT +
Preference number: 6 (lower is better)
Translates to: QNSSPRGKKRQS*PPRGRITRPGT
Trigger: AGTACCCGGACGAGTTATGCGGCCTCTGGGTGGCCAACTTTGGCGCTTCTTGCCTCGCGGACTCGAGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255390.10
ENST00000577335.2
ENST00000577427.1
ENST00000579396.1
CDS GCA 72 bp AACAGGCTTGTCTGGCCGACTTTGTCAACCTCGTCCTaGCGGCCAAGAGGAAGTGCCAGAATGTTGACTCCT +
Preference number: 6 (lower is better)
Translates to: NRLVWPTLSTSS*RPRGSARMLTP
Trigger: AGGAGTCAACATTCTGGCACTTCCTCTTGGCCGGCAGGACGAGGTTGACAAAGTCGGCCAGACAAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS TCA 72 bp CCTCGTCCTGCCGGCCAAGAGGAAGTGCCAGAATGTTaGCTCCTTTACATCTTTGAAATAGAAACCGACCCA +
Preference number: 6 (lower is better)
Translates to: PRPAGQEEVPEC*LLYIFEIETDP
Trigger: TGGGTCGGTTTCTATTTCAAAGATGTAAAGGAGTCAACATTCTGGCACTTCCTCTTGGCCGGCAGGACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS TCA 72 bp CTCACGGACTCCCTTGCTCCCTACAGTTTCGTTATTTaGAGTTTGTTATGGGTTCCTCATCTGGAACTGCTT +
Preference number: 6 (lower is better)
Translates to: LTDSLAPYSFVI*SLLWVPHLELL
Trigger: AAGCAGTTCCAGATGAGGAACCCATAACAAACTTCAAATAACGAAACTGTAGGGAGCAAGGGAGTCCGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS CAA 90 bp AGGGCTGAGCAGATGATAATCTACTTACTCTCTGCCTTTTCTTTCTaGACGTGCTTCATTCCAGCCAGTAAAGCTCCTCCAATAGCAAAT +
Preference number: 6 (lower is better)
Translates to: RAEQMIIYLLSAFSF*TCFIPASKAPPIAN
Trigger: ATTTGCTATTGGAGGAGCTTTACTGGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAGAGAGTAAGTAGATTATCATCTGCTCAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579396.1
CDS GCA 72 bp GGTCCCAGTTTCTTAAAATACTCTCACGGACTCCCTTaGTCCCTACAGTTTCGTTATTTGAAGTTTGTTATG +
Preference number: 6 (lower is better)
Translates to: GPSFLKYSHGLP*SLQFRYLKFVM
Trigger: CATAACAAACTTCAAATAACGAAACTGTAGGGAGCAAGGGAGTCCGTGAGAGTATTTTAAGAAACTGGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS TCA 72 bp AGAGGAAGTGCCAGAATGTTGACTCCTTTACATCTTTaGAATAGAAACCGACCCATTGCGATTGAAATAGTC +
Preference number: 6 (lower is better)
Translates to: RGSARMLTPLHL*NRNRPIAIEIV
Trigger: GACTATTTCAATCGCAATGGGTCGGTTTCTATTTCAAAGATGTAAAGGAGTCAACATTCTGGCACTTCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS GCA 72 bp TTATTTGAAGTTTGTTATGGGTTCCTCATCTGGAACTaGTTATGTTCCTTGTTAATGAGGCCAAGAGCATTC +
Preference number: 6 (lower is better)
Translates to: LFEVCYGFLIWN*LCSLLMRPRAF
Trigger: GAATGCTCTTGGCCTCATTAACAAGGAACATAAGCAGTTCCAGATGAGGAACCCATAACAAACTTCAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1
CDS CCA 72 bp GTTTCGTTATTTGAAGTTTGTTATGGGTTCCTCATCTaGAACTGCTTATGTTCCTTGTTAATGAGGCCAAGA +
Preference number: 6 (lower is better)
Translates to: VSLFEVCYGFLI*NCLCSLLMRPR
Trigger: TCTTGGCCTCATTAACAAGGAACATAAGCAGTTCCAGATGAGGAACCCATAACAAACTTCAAATAACGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582053.1