RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCNN1D (Homo sapiens)

Ensembl gene IDs: ENSG00000162572

Ensembl transcript IDs: ENST00000325425.12, ENST00000338555.6, ENST00000379101.8, ENST00000379116.10, ENST00000400928.7, ENST00000467651.2, ENST00000470022.1

Found 694 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTGTTGTGTAGCAGCTCCACCTCCACGCCTTCCCCGCCGGCGGTaGAGTGGCCGTAGGGGCTCCCGAGCCGGTGCACCTCGTCCTCTC +
Preference number: 1 (lower is better)
Translates to: RCCVAAPPPRLPRRR*SGRRGSRAGAPRPL
Trigger: GAGAGGACGAGGTGCACCGGCTCGGGAGCCCCTACGGCCACTGCACCGCCGGCGGGGAAGGCGTGGAGGTGGAGCTGCTACACAACACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR GCA 90 bp AGAGGCGGTAGAAGCAGTGTCCCCAGGCAGGGTGCCGGGCAGAGCTaGAGTACTCAGCCCCCGCCGGCAGAGGGTGGAGGTAGTAGCCAC +
Preference number: 1 (lower is better)
Translates to: RGGRSSVPRQGAGQS*STQPPPAEGGGSSH
Trigger: GTGGCTACTACCTCCACCCTCTGCCGGCGGGGGCTGAGTACTGCAGCTCTGCCCGGCACCCTGCCTGGGGACACTGCTTCTACCGCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR CCA 90 bp CCGGTGCACCTCGTCCTCTCGGATGCTGATGGTGGCCTCCGTCCCTaGCCGGACGCTGAAGCTGTGGTGCCCCAGGAAGGGCGTGTGGTT +
Preference number: 1 (lower is better)
Translates to: PVHLVLSDADGGLRP*PDAEAVVPQEGRVV
Trigger: AACCACACGCCCTTCCTGGGGCACCACAGCTTCAGCGTCCGGCCAGGGACGGAGGCCACCATCAGCATCCGAGAGGACGAGGTGCACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR CCA 90 bp GCTGAGCTGTCCAGACGCCATCGACCGTGTAGCAGCTGCCGTAGGTaGGGTGGTGGAAGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGC +
Preference number: 1 (lower is better)
Translates to: AELSRRHRPCSSCRR*GGGRSGTVGPGSPG
Trigger: GCCTGGACTGCCAGGCCCGACAGTTCCGGACCTTCCACCACCCCACCTACGGCAGCTGCTACACGGTCGATGGCGTCTGGACAGCTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR TCA 90 bp ACGCTGAAGCTGTGGTGCCCCAGGAAGGGCGTGTGGTTACGGCCGTaGACCATGACCCTGATGCCGGCCAGCGTGGACAGCAGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: TLKLWCPRKGVWLRP*TMTLMPASVDSRGR
Trigger: CCTCCCTCTGCTGTCCACGCTGGCCGGCATCAGGGTCATGGTTCACGGCCGTAACCACACGCCCTTCCTGGGGCACCACAGCTTCAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR GCA 90 bp GGAAGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTaGAGGAGAGGACGAAGTGGCCGTCCTGGCTCCCGTGGCTGTCCT +
Preference number: 1 (lower is better)
Translates to: GRSGTVGPGSPGHRN*RRGRSGRPGSRGCP
Trigger: AGGACAGCCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR GCA 90 bp GGAGAGGACGAAGTGGCCGTCCTGGCTCCCGTGGCTGTCCTCCCATaGCGCGGGCAGCAGGGCCAGGATATCCACATAGTGGAAGTGGTA +
Preference number: 1 (lower is better)
Translates to: GEDEVAVLAPVAVLP*RGQQGQDIHIVEVV
Trigger: TACCACTTCCACTATGTGGATATCCTGGCCCTGCTGCCCGCGGCATGGGAGGACAGCCACGGGAGCCAGGACGGCCACTTCGTCCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR TCA 90 bp GGCCGAGAGCAGCTGCGGCACCGAGTACACGGGCGCCTCCTCCACTaGGCGGTAGTTGAGCTCCTGGTAGACGATGTTGATTTTGGCCAG +
Preference number: 1 (lower is better)
Translates to: GREQLRHRVHGRLLH*AVVELLVDDVDFGQ
Trigger: CTGGCCAAAATCAACATCGTCTACCAGGAGCTCAACTACCGCTCAGTGGAGGAGGCGCCCGTGTACTCGGTGCCGCAGCTGCTCTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR CCA 90 bp AGGTGCATCAGACGTGTGGACATGCAGACACAGACACACGGAGCATaGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGC +
Preference number: 1 (lower is better)
Translates to: RCIRRVDMQTQTHGA*VHHRVSARPAALVC
Trigger: GCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCACACGTCTGATGCACCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR TCA 90 bp ATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCACGCCTaGCGTGTAGCCTCGGTAAAAGCAGTCGCCGCCCGTGCTGTTGCA +
Preference number: 1 (lower is better)
Translates to: IHIVEVVPVLDSRHA*RVASVKAVAARAVA
Trigger: TGCAACAGCACGGGCGGCGACTGCTTTTACCGAGGCTACACGTCAGGCGTGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR CCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTTGGTCTGGCCCACCCTaGGCCGCTGGGGAGCCTGCT +
Preference number: 2 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLWSGPP*AAGEPA
Trigger: AGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAGACCA...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCGACATGCCCGGTGCCTaGCTCCCCACGGCCGCGTGT +
Preference number: 2 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPDMPGA*LPTAAC
Trigger: ACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTC...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCCCAGAGGCGCCGACATaGCCGGTGCCTGCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPPEAPT*PVPASP
Trigger: TGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
71% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CCA 90 bp CGGCGGTGCAGTGGCCGTAGGGGCTCCCGAGCCGGTGCACCTCGTCCTCTCGGAAGCAGCTGCCGTAGGTaGGGTGGTGGAAGGTCCGGA +
Preference number: 2 (lower is better)
Translates to: RRCSGRRGSRAGAPRPLGSSCRR*GGGRSG
Trigger: TCCGGACCTTCCACCACCCCACCTACGGCAGCTGCT...TCCGAGAGGACGAGGTGCACCGGCTCGGGAGCCCCTACGGCCACTGCACCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR GCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCCGCTGGGGAGCCTGCTaGTGCCACAGCTGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPRWGAC*CHSCKD
Trigger: GTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCG...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCGGCCGCTGGGGAGCCTaGTGCTGCCACAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAGRWGA*CCHSCK
Trigger: CTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCC...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGGGCCGCTGGGGAGCCTaGTGCTGCCACAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: HGYITACRHVQPHSCARGGRWGA*CCHSCK
Trigger: CTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCC...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp GACTCCGTGGGTGATGCCGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTAGTGGCTGTCCTCCCATaGCGCGGGCAGCAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: DSVGDAGALSCPDAIDRVVAVLP*RGQQGQ
Trigger: CTGGCCCTGCTGCCCGCGGCATGGGAGGACAGCCAC...TACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCACCCACGGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR GCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGCTTCCCCGCCGGCGGTaGAGTGGCCGTAGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLLPRRR*SGRRGS
Trigger: GGAGCCCCTACGGCCACTGCACCGCCGGCGGGGAAG...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTTGCTGCTGCCACAGCTaGAAGGACCAGGCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLCCCHS*KDQAKR
Trigger: TCTCTTGGCCTGGTCCTTGCAGCTGTGGCAGCAGCA...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCCACGGCCGCGTGTGCTaGTTCCTGGGCTGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAHGRVC*FLGCWS
Trigger: AGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTG...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGACATGCCCGGTGCCTaGCTCCCCACGGCCGCGTGT +
Preference number: 2 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCDMPGA*LPTAAC
Trigger: ACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR TCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGTCCCTGGCCGGACGCTaGAGCTGTGGTGCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLSLAGR*SCGAPG
Trigger: TCCTGGGGCACCACAGCTTCAGCGTCCGGCCAGGGA...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGGGGAGCCTGCTGCTaGCACAGCTGCAAGGACCAG +
Preference number: 2 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAWGACC*HSCKDQ
Trigger: CTGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCA...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGCGCTGGGGAGCCTGCTaGTGCCACAGCTGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHARWGAC*CHSCKD
Trigger: GTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCG...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAATGCTGCTTCCTGGGCTaGTGGTCTGGCCCACCCTGG +
Preference number: 2 (lower is better)
Translates to: WVHHRVSARPAALVCTRECCFLG*WSGPPW
Trigger: CCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCAGCA...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCCACGGCCGCGTGTGCTaGTTCCTGGGCTGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: EHGYITACRHVQPHSCARHGRVC*FLGCWS
Trigger: AGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTG...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTCCCACCCTGGGCCGCTaGGGAGCCTGCTGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPPTLGR*GACCCH
Trigger: GTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGG...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CCA 90 bp AGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTGCAGGAGAGGACCGTCCTGGCTCCCGTaGCTGTCCTCCCATGCCGCG +
Preference number: 2 (lower is better)
Translates to: RSGTVGPGSPGHRNCRRGPSWLP*LSSHAA
Trigger: CGCGGCATGGGAGGACAGCCACGGGAGCCAGGACGG...TCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR TCA 90 bp GAAGGCCACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCGTGATGCCGGGGCGCTaGGCTGTCCAGACGCCATCG +
Preference number: 2 (lower is better)
Translates to: EGHLEVPVESLNADSLQGVMPGR*AVQTPS
Trigger: CGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCAC...GCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTGGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR GCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCACGGCCGCGTGTGCTaGTTCCTGGGCTGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCHGRVC*FLGCWS
Trigger: AGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTG...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGACATGCCCGGTGCCTaGCTCCCCACGGCCGCGTGT +
Preference number: 2 (lower is better)
Translates to: CRHRHTEHGYITACRHVQDMPGA*LPTAAC
Trigger: ACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTC...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTCCAGAGGCGCCGACATaGCCGGTGCCTGCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPPEAPT*PVPASP
Trigger: TGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CCA 90 bp CTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCCGGACGCTGAAGCTGTaGTGCCCCAGGAAGGGCGTG +
Preference number: 2 (lower is better)
Translates to: LAWPESIQLTWRKATWRSRTLKL*CPRKGV
Trigger: CACGCCCTTCCTGGGGCACCACAGCTTCAGCGTCCG...GGACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR TCA 90 bp TCTGTCTGTGGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCGCTGCTGCTCAACCCTaGGGACCAGGCCGACTCCGT +
Preference number: 2 (lower is better)
Translates to: SVCGSDAAAPVHLAWPESAAAQP*GPGRLR
Trigger: ACGGAGTCGGCCTGGTCCTCAGGGTTGAGCAGCAGC...GGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCCACAGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCTGCTGCCACAGCTaGAAGGACCAGGCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: PTPGSVGGLTRGADMPGACCCHS*KDQAKR
Trigger: TCTCTTGGCCTGGTCCTTGCAGCTGTGGCAGCAGCA...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGTGCTGCTTCCTGGGCTaGTGGTCTGGCCCACCCTGG +
Preference number: 2 (lower is better)
Translates to: FQSSPSVSVGPALPSASLCCFLG*WSGPPW
Trigger: CCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCAGCA...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCCCACCCTGGGCCGCTaGGGAGCCTGCTGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVPTLGR*GACCCH
Trigger: GTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCATGGTCTGGCCCACCCTaGGCCGCTGGGGAGCCTGCT +
Preference number: 2 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPWSGPP*AAGEPA
Trigger: AGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAGACCA...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CCA 90 bp GACTCCGTGGGTGATGCCGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTAAAGTGGTACCAGTCCTaGACAGCCGCCACGCCTGAC +
Preference number: 2 (lower is better)
Translates to: DSVGDAGALSCPDAIDRVKWYQS*TAATPD
Trigger: GTCAGGCGTGGCGGCTGTCCAGGACTGGTACCACTT...TACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCACCCACGGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR TCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGGACAGCCGCCACGCCTaGCGTGTAGCCTCGGTAAAA +
Preference number: 2 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLDSRHA*RVASVK
Trigger: TTTTACCGAGGCTACACGTCAGGCGTGGCGGCTGTC...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR GCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGCCGCTGGGGAGCCTaGTGCTGCCACAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPGRWGA*CCHSCK
Trigger: CTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCGACATGCCCGGTGCCTaGCTCCCCACGGCCGCGTGT +
Preference number: 2 (lower is better)
Translates to: FISEQPKCVRGACLAFCLDMPGA*LPTAAC
Trigger: ACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTC...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp GACTCCGTGGGTGATGCCGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTACCAGGCCATCGTAACTaGAGGAGAGGACGAAGTGGC +
Preference number: 2 (lower is better)
Translates to: DSVGDAGALSCPDAIDRVPGHRN*RRGRSG
Trigger: GCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTGG...TACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCACCCACGGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGTGGTCTGGCCCACCCTaGGCCGCTGGGGAGCCTGCT +
Preference number: 2 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVWSGPP*AAGEPA
Trigger: AGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAGACCA...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCTGCTGCTGCCACAGCTaGAAGGACCAGGCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCCCCHS*KDQAKR
Trigger: TCTCTTGGCCTGGTCCTTGCAGCTGTGGCAGCAGCA...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGGGCCGCTGGGGAGCCTaGTGCTGCCACAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVGRWGA*CCHSCK
Trigger: CTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCC...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCCACGGCCGCGTGTGCTaGTTCCTGGGCTGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAHGRVC*FLGCWS
Trigger: AGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTG...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCAGAGGCGCCGACATaGCCGGTGCCTGCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: ESTALFQSSPSVSVGPALPEAPT*PVPASP
Trigger: TGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCGCTGGGGAGCCTGCTaGTGCCACAGCTGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: FISEQPKCVRGACLAFCLRWGAC*CHSCKD
Trigger: GTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCGCTGGGGAGCCTGCTaGTGCCACAGCTGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVRWGAC*CHSCKD
Trigger: GTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGTGCTGCTTCCTGGGCTaGTGGTCTGGCCCACCCTGG +
Preference number: 2 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVCCFLG*WSGPPW
Trigger: CCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCAGCA...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCCCAGGCAGTGTAGGTaGTTTGACCAGAGGCGCCGA +
Preference number: 2 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVPRQCR*FDQRRR
Trigger: TCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCCAGACACACGGAGCATaGGTACATCACCGCGTGTCG +
Preference number: 2 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAQTHGA*VHHRVS
Trigger: CGACACGCGGTGATGTACCCATGCTCCGTGTGTCTG...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGACACACGTACACAGGTaGATCAGACGTGTGGACATG +
Preference number: 2 (lower is better)
Translates to: FQSSPSVSVGPALPSASLTHVHR*IRRVDM
Trigger: CATGTCCACACGTCTGATGCACCTGTGTACGTGTGT...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGTGCTGCTGCCACAGCTaGAAGGACCAGGCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: ESTALFQSSPSVSVGPALCCCHS*KDQAKR
Trigger: TCTCTTGGCCTGGTCCTTGCAGCTGTGGCAGCAGCA...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR GCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTACACACGTACACAGGTaGATCAGACGTGTGGACATG +
Preference number: 2 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPTHVHR*IRRVDM
Trigger: CATGTCCACACGTCTGATGCACCTGTGTACGTGTGT...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR GCA 72 bp CATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTaGTTCCTGGGCTGCTGGTCTGGCCCACCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: HARCLPPHGRVC*FLGCWSGPPWA
Trigger: GGCCCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR GCA 72 bp CGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTaGTGCTTCCTGGGCTGCTGGTCTGGCCCACCCTGG +
Preference number: 3 (lower is better)
Translates to: RHARCLPPHGRV*CFLGCWSGPPW
Trigger: CCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR CCA 72 bp CTGCAGGAGAGGACGAAGTGGCCGTCCTGGCTCCCGTaGCTGTCCTCCCATGCCGCGGGCAGCAGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: LQERTKWPSWLP*LSSHAAGSRAR
Trigger: CCTGGCCCTGCTGCCCGCGGCATGGGAGGACAGCCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR GCA 72 bp GGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTaGCTCCCCACGGCCGCGTGTGCTGCTTCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: GGLTRGADMPGA*LPTAACAASWA
Trigger: AGCCCAGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR GCA 72 bp AGAAGCAGTGTCCCCAGGCAGGGTGCCGGGCAGAGCTaGAGTACTCAGCCCCCGCCGGCAGAGGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: RSSVPRQGAGQS*STQPPPAEGGG
Trigger: ACCTCCACCCTCTGCCGGCGGGGGCTGAGTACTGCAGCTCTGCCCGGCACCCTGCCTGGGGACACTGCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR GCA 72 bp TGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTaGCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTG +
Preference number: 3 (lower is better)
Translates to: CRWFDQRRRHAR*LPPHGRVCCFL
Trigger: CAGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR CCA 72 bp CCGGGCCTCCTTGAGACCCACCCCAGGCAGTGTAGGTaGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTG +
Preference number: 3 (lower is better)
Translates to: PGLLETHPRQCR*FDQRRRHARCL
Trigger: CAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGGTCTCAAGGAGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR TCA 72 bp CTGTGGTGCCCCAGGAAGGGCGTGTGGTTACGGCCGTaGACCATGACCCTGATGCCGGCCAGCGTGGACAGC +
Preference number: 3 (lower is better)
Translates to: LWCPRKGVWLRP*TMTLMPASVDS
Trigger: GCTGTCCACGCTGGCCGGCATCAGGGTCATGGTTCACGGCCGTAACCACACGCCCTTCCTGGGGCACCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR CCA 72 bp TCCAGACGCCATCGACCGTGTAGCAGCTGCCGTAGGTaGGGTGGTGGAAGGTCCGGAACTGTCGGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: SRRHRPCSSCRR*GGGRSGTVGPG
Trigger: GCCAGGCCCGACAGTTCCGGACCTTCCACCACCCCACCTACGGCAGCTGCTACACGGTCGATGGCGTCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR CAA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCCCGCCCCGGGCCTCCTaGAGACCCACCCCAGGCAGT +
Preference number: 3 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAPPRAS*RPTPGS
Trigger: ACTGCCTGGGGTGGGTCTCAAGGAGGCCCGGGGCGG...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR GCA 72 bp GGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTaGAGGAGAGGACGAAGTGGCCGTCCTGGCTCCCGT +
Preference number: 3 (lower is better)
Translates to: GTVGPGSPGHRN*RRGRSGRPGSR
Trigger: ACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR CAA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGCAGTGTAGGTGGTTaGACCAGAGGCGCCGACATG +
Preference number: 3 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAGSVGG*TRGADM
Trigger: CATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CAA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCGCCCCGGGCCTCCTaGAGACCCACCCCAGGCAGT +
Preference number: 3 (lower is better)
Translates to: FISEQPKCVRGACLAFCLPPRAS*RPTPGS
Trigger: ACTGCCTGGGGTGGGTCTCAAGGAGGCCCGGGGCGG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR TCA 72 bp GTGGAAGTGGTACCAGTCCTGGACAGCCGCCACGCCTaGCGTGTAGCCTCGGTAAAAGCAGTCGCCGCCCGT +
Preference number: 3 (lower is better)
Translates to: VEVVPVLDSRHA*RVASVKAVAAR
Trigger: ACGGGCGGCGACTGCTTTTACCGAGGCTACACGTCAGGCGTGGCGGCTGTCCAGGACTGGTACCACTTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR CCA 72 bp TGTGGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTaGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCC +
Preference number: 3 (lower is better)
Translates to: CGSDAAAPVHLA*PESIQLTWRKA
Trigger: GGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR CAA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGGGCAGTGTAGGTGGTTaGACCAGAGGCGCCGACATG +
Preference number: 3 (lower is better)
Translates to: FQSSPSVSVGPALPSASLGSVGG*TRGADM
Trigger: CATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CAA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGGCAGTGTAGGTGGTTaGACCAGAGGCGCCGACATG +
Preference number: 3 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPGSVGG*TRGADM
Trigger: CATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CAA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCTGAGGTGGCTAGGCTaGACACACGTACACAGGTGC +
Preference number: 3 (lower is better)
Translates to: FQSSPSVSVGPALPSASLLRWLG*THVHRC
Trigger: GCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAG...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR TCA 72 bp CAGCTGCGGCACCGAGTACACGGGCGCCTCCTCCACTaGGCGGTAGTTGAGCTCCTGGTAGACGATGTTGAT +
Preference number: 3 (lower is better)
Translates to: QLRHRVHGRLLH*AVVELLVDDVD
Trigger: ATCAACATCGTCTACCAGGAGCTCAACTACCGCTCAGTGGAGGAGGCGCCCGTGTACTCGGTGCCGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
3UTR-3UTR CAA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCTGAGGTGGCTAGGCTaGACACACGTACACAGGTGC +
Preference number: 3 (lower is better)
Translates to: FISEQPKCVRGACLAFCLLRWLG*THVHRC
Trigger: GCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
3UTR-3UTR CAA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCTGAGGTGGCTAGGCTaGACACACGTACACAGGTGC +
Preference number: 3 (lower is better)
Translates to: ESTALFQSSPSVSVGPALLRWLG*THVHRC
Trigger: GCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAG...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCTTCCCCGCCGGCGGTaGAGTGGCCGTAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLLPRRR*SGRRGS
Trigger: GGAGCCCCTACGGCCACTGCACCGCCGGCGGGGAAG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCACTTCCCCGCCGGCGGTaGAGTGGCCGTAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPLPRRR*SGRRGS
Trigger: GGAGCCCCTACGGCCACTGCACCGCCGGCGGGGAAG...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTAGGAGAACCACGCCCTaGGGAGCCGGCGGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPRRTTP*GAGGRL
Trigger: TAGGCGGCCGCCGGCTCCGCAGGGCGTGGTTCTCCT...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTCCGGGTCATCTGACGTaGCGCCTGCAGGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPPGHLT*RLQAGA
Trigger: TGCCCCCGCCTGCAGGCGGCACGTCAGATGACCCGG...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCAGAGGCGCCGACATaGCCGGTGCCTGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLPEAPT*PVPASP
Trigger: TGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCCCGGTGCAGGGGGTaGGGTGGGGCGAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAARCRG*GGANPA
Trigger: AGCTGGGTTCGCCCCACCCCACCCCCTGCACCGGGC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTCCGTCCTGGCTCCCGTaGCTGTCCTCCCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPPSWLP*LSSHAA
Trigger: CGCGGCATGGGAGGACAGCCACGGGAGCCAGGACGG...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGTGGCTGTCCTCCCATaGCGCGGGCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAVAVLP*RGQQGQ
Trigger: CTGGCCCTGCTGCCCGCGGCATGGGAGGACAGCCAC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTGGGCTCCCGAGCCGGTaGACCTCGTCCTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLGLPSR*TSSSRM
Trigger: CATCCGAGAGGACGAGGTGCACCGGCTCGGGAGCCC...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCCGGGTCATCTGACGTaGCGCCTGCAGGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAPGHLT*RLQAGA
Trigger: TGCCCCCGCCTGCAGGCGGCACGTCAGATGACCCGG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTGGCCGCTGGGGAGCCTaGTGCTGCCACAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLGRWGA*CCHSCK
Trigger: CTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCC...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGACATGCCCGGTGCCTaGCTCCCCACGGCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACADMPGA*LPTAAC
Trigger: ACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCCAGGTGAGCCTCCTTaGGCCGCTGAGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAPGEPP*AAEVAG
Trigger: CCCGGCCACCTCAGCGGCCCAAGGAGGCTCACCTGG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCTGGTGGTGGTGGTGCTaGTGGTGGCCCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPWWWWC*WWPRPG
Trigger: CCCAGGCCGGGGCCACCATCAGCACCACCACCACCA...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAGCACAGAGACGGCCATaGGGACCGGGCGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPAQRRP*GPGGAS
Trigger: ACTGGCACCGCCCGGTCCTCATGGCCGTCTCTGTGC...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCACAGAGACGGCCATaGGGACCGGGCGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAAQRRP*GPGGAS
Trigger: ACTGGCACCGCCCGGTCCTCATGGCCGTCTCTGTGC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAGTGATGCCGGGGCGCTaGGCTGTCCAGACGCCATCG +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPVMPGR*AVQTPS
Trigger: CGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCAC...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTGCTGCTGCTCAACCCTaGGGACCAGGCCGACTCCGT +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPAAAQP*GPGRLR
Trigger: ACGGAGTCGGCCTGGTCCTCAGGGTTGAGCAGCAGC...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCGTCCTCTCGGATGCTaGTGGTGGCCTCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLRPLGC*WWPPSL
Trigger: CAGGGACGGAGGCCACCATCAGCATCCGAGAGGACG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTCGTCCTCTCGGATGCTaGTGGTGGCCTCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPRPLGC*WWPPSL
Trigger: CAGGGACGGAGGCCACCATCAGCATCCGAGAGGACG...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTGGGCGCCTCCTCCACTaGGCGGTAGTTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLGRLLH*AVVELL
Trigger: CAGGAGCTCAACTACCGCTCAGTGGAGGAGGCGCCC...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTGACTGGCCTCTGGCTTaGTGCTGGACGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPDWPLA*CWTPLR
Trigger: CCTCAGGGGCGTCCAGCATCAAGCCAGAGGCCAGTC...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTCCAGCTCTCTTCGGCTaGGACTCCCGCCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPPALFG*DSRQNP
Trigger: GGGGTTCTGGCGGGAGTCTCAGCCGAAGAGAGCTGG...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTAGCAGCTGCCGTAGGTGGGCCTCCTTGGGCCGCTaGGGTGGCCGGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: RGAELSRRHRPCSSCRRWASLGR*GGRATG
Trigger: ACCTGTGGCCCGGCCACCTCAGCGGCCCAAGGAGGC...CCACCTACGGCAGCTGCTACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCGCCTCCTTGGGCCGCTaGGGTGGCCGGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPASLGR*GGRATG
Trigger: ACCTGTGGCCCGGCCACCTCAGCGGCCCAAGGAGGC...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCCAAGGTGCCCCCGGCTaGTGGCCTGGGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPQGAPG*WPGWVL
Trigger: CAGCACCCACCCAGGCCAGCAGCCGGGGGCACCTTG...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR GCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTACCAGCCCCTCCTGGTaGCCCTCCTTGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPTSPSW*PSLGGG
Trigger: ACCACCACCCAAGGAGGGGCACCAGGAGGGGCTGGT...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCGTGGCTGTCCTCCCATaGCGCGGGCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPVAVLP*RGQQGQ
Trigger: CTGGCCCTGCTGCCCGCGGCATGGGAGGACAGCCAC...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAGGCCGCTGGGGAGCCTaGTGCTGCCACAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPGRWGA*CCHSCK
Trigger: CTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCC...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTTGCTGCTTCCTGGGCTaGTGGTCTGGCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPCCFLG*WSGPPW
Trigger: CCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCAGCA...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTAGCAGCTGCCGTAGGTGGGTGCAGGGGGTGGGGTaGGGCGAACCCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RGAELSRRHRPCSSCRRWVQGVG*GEPSSR
Trigger: CCGGGAGCTGGGTTCGCCCCACCCCACCCCCTGCAC...CCACCTACGGCAGCTGCTACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGGCCCGGTGCAGGGGGTaGGGTGGGGCGAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGARCRG*GGANPA
Trigger: AGCTGGGTTCGCCCCACCCCACCCCCTGCACCGGGC...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCATGGTGGCCCCGGCCTaGGGGGCGTCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAMVAPA*GASGLQ
Trigger: CTGCAGCCCAGACGCCCCCCAGGCCGGGGCCACCAT...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTAGCAGCTGCCGTAGGTGGATGGTGGCCCCGGCCTaGGGGGCGTCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RGAELSRRHRPCSSCRRWMVAPA*GASGLQ
Trigger: CTGCAGCCCAGACGCCCCCCAGGCCGGGGCCACCAT...CCACCTACGGCAGCTGCTACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTGGTGCCCCTCCTTaGGTGGTGGTGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLPGAPP*VVVVVL
Trigger: CAGCACCACCACCACCACCCAAGGAGGGGCACCAGG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCCCGTCCTGGCTCCCGTaGCTGTCCTCCCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPPSWLP*LSSHAA
Trigger: CGCGGCATGGGAGGACAGCCACGGGAGCCAGGACGG...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
71% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAGGTGGCCTCCGTCCCTaGCCGGACGCTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPGGLRP*PDAEAV
Trigger: CACAGCTTCAGCGTCCGGCCAGGGACGGAGGCCACC...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTTGCAGAGGCTGCCCATaGCCGAGAGCAGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLCRGCP*PRAAAA
Trigger: TGCCGCAGCTGCTCTCGGCCATGGGCAGCCTCTGCA...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTGGAGATGAGGCCCGCTaGGCTCCGGGTCATCTGACG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLGDEAR*APGHLT
Trigger: CGTCAGATGACCCGGAGCCCAGCGGGCCTCATCTCC...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTAGCAGCTGCCACCGGTaGCGTCCTGGAGAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLSSCHR*RPGEES
Trigger: GCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCT...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGGTGGTGGTGGTGCTaGTGGTGGCCCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAWWWWC*WWPRPG
Trigger: CCCAGGCCGGGGCCACCATCAGCACCACCACCACCA...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCCCCAGGACGTCGTCTTaGGGCGGTTCCCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAPRTSS*GGSRGS
Trigger: GCTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGG...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTTCCCGTCACACAGGGTaGCCAGCGGGAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACASRHTG*PAGAAC
Trigger: GCAAGCTGCTCCCGCTGGTCACCCTGTGTGACGGGA...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGCCGACTCCGTGGGTaGTGCCGGGGCGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARGRLRG*CRGAEL
Trigger: CAGCTCAGCGCCCCGGCATCACCCACGGAGTCGGCC...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGACTGGCCTCTGGCTTaGTGCTGGACGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACADWPLA*CWTPLR
Trigger: CCTCAGGGGCGTCCAGCATCAAGCCAGAGGCCAGTC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCAGGCGGGGGCATCTaGCTGGCCTCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAAGGGI*LASGLM
Trigger: CATCAAGCCAGAGGCCAGTCAGATGCCCCCGCCTGC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCATCACCCGTGGGAGATaGGGCCCGCTGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPITRGR*GPLGSG
Trigger: CCCGGAGCCCAGCGGGCCTCATCTCCCACGGGTGAT...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCAAGGTGGCACCAAGGTaGCCCCGGCTGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPKVAPR*PRLLAW
Trigger: CCAGGCCAGCAGCCGGGGGCACCTTGGTGCCACCTT...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCGTCCATGCTTCGGTaGTCAGCCATTGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLPSMLR*SAIAGA
Trigger: TGCCCCCGCAATGGCTGAGCACCGAAGCATGGACGG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTCCAGCGGGAGCAGCTTaGGCTCCGAGTGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPPAGAA*APSAQR
Trigger: TCTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGG...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTGAGTGGCTCAGCCTCTaGAGACGGATCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLEWLSL*RRISRS
Trigger: GGACCGGGAGATCCGTCTGCAGAGGCTGAGCCACTC...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACTTCCCCGCCGGCGGTaGAGTGGCCGTAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTRELPRRR*SGRRGS
Trigger: GGAGCCCCTACGGCCACTGCACCGCCGGCGGGGAAG...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGCTTCCCCGCCGGCGGTaGAGTGGCCGTAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHALPRRR*SGRRGS
Trigger: GGAGCCCCTACGGCCACTGCACCGCCGGCGGGGAAG...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGGGTGCCGGGCAGAGCTaGAGTACTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGGAGQS*STQPPP
Trigger: CGGCGGGGGCTGAGTACTGCAGCTCTGCCCGGCACC...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCCCCAAACCACAGGCTaGAGAGGCTGCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAPQTTG*RGCPWP
Trigger: CGGCCATGGGCAGCCTCTGCAGCCTGTGGTTTGGGG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAGGAGAACCACGCCCTaGGGAGCCGGCGGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGRRTTP*GAGGRL
Trigger: TAGGCGGCCGCCGGCTCCGCAGGGCGTGGTTCTCCT...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTTGGGGAGCCTGCTGCTaGCACAGCTGCAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPWGACC*HSCKDQ
Trigger: CTGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCA...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTTGGGGAGCCTGCTGCTaGCACAGCTGCAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLWGACC*HSCKDQ
Trigger: CTGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCA...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCGACATGCCCGGTGCCTaGCTCCCCACGGCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGADMPGA*LPTAAC
Trigger: ACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTC...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCCCAGAGGCGCCGACATaGCCGGTGCCTGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPPEAPT*PVPASP
Trigger: TGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTTGTGTCCGTGGGGCCTaGCTTGCCTTCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPCVRGA*LAFCLP
Trigger: AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACA...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCAGGCCAGGGGTGGCCTaGGGTCCCTCTGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGARPGVA*GPSGVL
Trigger: CAGGACCCCAGAGGGACCCCAGGCCACCCCTGGCCT...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCGTCCTCCCCCTCTTCTaGGCCATCCCCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPVLPLF*AIPSLA
Trigger: GGCCAGCGAGGGGATGGCCCAGAAGAGGGGGAGGAC...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCCTCCTGCCGGCTCTaGAAGGAAGCAGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAASCRL*KEAAAT
Trigger: GGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGAGGC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAGCAGGATGGAGCCTCTaGCCTCCTGCCGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPAGWSL*PPAGSG
Trigger: TCCAGAGCCGGCAGGAGGCCAGAGGCTCCATCCTGC...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCACGGACTCGGCCGACGTaGGTTCCCGTCACACAGGGT +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPRTRPT*VPVTQG
Trigger: ACCCTGTGTGACGGGAACCCACGTCGGCCGAGTCCG...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACGTGGCGGGGGACAGTaGCGGAGAGGGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTRERGGGQ*RRGRLC
Trigger: GCAGAGCCGCCCTCTCCGCCACTGTCCCCCGCCACG...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGCCGTCCTGGCTCCCGTaGCTGTCCTCCCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGPSWLP*LSSHAA
Trigger: CGCGGCATGGGAGGACAGCCACGGGAGCCAGGACGG...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTAGCAGCTGCCGTAGGTGGCCGTCCTGGCTCCCGTaGCTGTCCTCCCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: RGAELSRRHRPCSSCRRWPSWLP*LSSHAA
Trigger: CGCGGCATGGGAGGACAGCCACGGGAGCCAGGACGG...CCACCTACGGCAGCTGCTACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCAGGAGAGGACGAAGTaGCCGTCCTGGCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAQERTK*PSWLPW
Trigger: CCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCGGACGCTGAAGCTGTaGTGCCCCAGGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACARTLKL*CPRKGV
Trigger: CACGCCCTTCCTGGGGCACCACAGCTTCAGCGTCCG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTTGCAGAGGCTGCCCATaGCCGAGAGCAGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACACRGCP*PRAAAA
Trigger: TGCCGCAGCTGCTCTCGGCCATGGGCAGCCTCTGCA...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAGGAGATGAGGCCCGCTaGGCTCCGGGTCATCTGACG +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPGDEAR*APGHLT
Trigger: CGTCAGATGACCCGGAGCCCAGCGGGCCTCATCTCC...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTTCCCGCCAGAACCCCTaGAAGCATCACCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPSRQNP*KHHPWE
Trigger: CTCCCACGGGTGATGCTTCCAGGGGTTCTGGCGGGA...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCACGGCCAGGCCCCATTaGCCGAGCATGGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPTARPH*PSMAVS
Trigger: GCTCACAGCCATGCTCGGTCAATGGGGCCTGGCCGT...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR TCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCCAGGTGAGCCTGAATaGGAGAAGGGACGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAPGEPE*EKGRAG
Trigger: GCCTGCCCGTCCCTTCTCTCATTCAGGCTCACCTGG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR TCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGTGGTGGTGGTGGTGCTaGTGGTGGCCCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAWWWWC*WWPRPG
Trigger: CCCAGGCCGGGGCCACCATCAGCACCACCACCACCA...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTTGGTGCAGAAGAAGGTaGGCAGCTCCCGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLWCRRR*AAPGTR
Trigger: CCTCGTTCCGGGAGCTGCTCACCTTCTTCTGCACCA...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GACTCCGTGGGTGATGCCGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTACCCAGGACGTCGTCTTaGGGCGGTTCCCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSVGDAGALSCPDAIDRVPRTSS*GGSRGS
Trigger: GCTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGG...TACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCACCCACGGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCAGGACGTCGTCTTaGGGCGGTTCCCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREPRTSS*GGSRGS
Trigger: GCTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGG...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACCGGGCGGTGCCAGTaGCGCTCAAAGAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPTGRCQ*RSKRSP
Trigger: GGGGCTCCTCTTTGAGCGTCACTGGCACCGCCCGGT...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCTCCCGTCACACAGGGTaGCCAGCGGGAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPSRHTG*PAGAAC
Trigger: GCAAGCTGCTCCCGCTGGTCACCCTGTGTGACGGGA...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTGACAGCCGCCACGCCTaGCGTGTAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLDSRHA*RVASVK
Trigger: TTTTACCGAGGCTACACGTCAGGCGTGGCGGCTGTC...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCGTGATGCCGGGGCGCTaGGCTGTCCAGACGCCATCG +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPVMPGR*AVQTPS
Trigger: CGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCAC...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGGGCCGACTCCGTGGGTaGTGCCGGGGCGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLGRLRG*CRGAEL
Trigger: CAGCTCAGCGCCCCGGCATCACCCACGGAGTCGGCC...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGGCCGACTCCGTGGGTaGTGCCGGGGCGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCGRLRG*CRGAEL
Trigger: CAGCTCAGCGCCCCGGCATCACCCACGGAGTCGGCC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCTCTGTCTGTGGCTCTaGTGCGGCAGCCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLLCLWL*CGSPCS
Trigger: TGAACAGGGGCTGCCGCATCAGAGCCACAGACAGAG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTCTCTGTCTGTGGCTCTaGTGCGGCAGCCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPLCLWL*CGSPCS
Trigger: TGAACAGGGGCTGCCGCATCAGAGCCACAGACAGAG...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCGCAGGCGGGGGCATCTaGCTGGCCTCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPAGGGI*LASGLM
Trigger: CATCAAGCCAGAGGCCAGTCAGATGCCCCCGCCTGC...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAAATCACCCGTGGGAGATaGGGCCCGCTGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREITRGR*GPLGSG
Trigger: CCCGGAGCCCAGCGGGCCTCATCTCCCACGGGTGAT...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGATCACCCGTGGGAGATaGGGCCCGCTGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAITRGR*GPLGSG
Trigger: CCCGGAGCCCAGCGGGCCTCATCTCCCACGGGTGAT...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCTCCCTTTGGGCCCATaGCTCTGCTCTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLLPLGP*LCSLPG
Trigger: TCCTGGGAGAGAGCAGAGGCATGGGCCCAAAGGGAG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGAGCCTCTGGCCTCCTaGCGGCTCTGGAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAEPLAS*RLWKEA
Trigger: TGCTTCCTTCCAGAGCCGGCAGGAGGCCAGAGGCTC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCACCAGCGGGAGCAGCTTaGGCTCCGAGTGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPPAGAA*APSAQR
Trigger: TCTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGG...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCACGACCGTGTAGCAGCTaGCGTAGGTGGGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPRPCSS*RRWGGG
Trigger: TCCACCACCCCACCTACGGCAGCTGCTACACGGTCG...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCATGGCCGAGAGCAGCTaGGGCACCGAGTACACGGGC +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPMAESS*GTEYTG
Trigger: GCCCGTGTACTCGGTGCCGCAGCTGCTCTCGGCCAT...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTACAGGCTGCAGAGGCTaGCCATGGCCGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACATGCRG*PWPRAA
Trigger: AGCTGCTCTCGGCCATGGGCAGCCTCTGCAGCCTGT...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCAGGAGAACCACGCCCTaGGGAGCCGGCGGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARRRTTP*GAGGRL
Trigger: TAGGCGGCCGCCGGCTCCGCAGGGCGTGGTTCTCCT...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTTGGGGAGCCTGCTGCTaGCACAGCTGCAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAWGACC*HSCKDQ
Trigger: CTGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCA...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAAGACATGCCCGGTGCCTaGCTCCCCACGGCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREDMPGA*LPTAAC
Trigger: ACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTC...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCAGAGGCGCCGACATaGCCGGTGCCTGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREPEAPT*PVPASP
Trigger: TGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCGTGAGCTCACCTCCTTaGGCCGCTGAGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAVSSPP*AAEVAG
Trigger: CCCGGCCACCTCAGCGGCCCAAGGAGGTGAGCTCAC...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGTGCAGGGGGTGGGGTaGGGCGAACCCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCVQGVG*GEPSSR
Trigger: CCGGGAGCTGGGTTCGCCCCACCCCACCCCCTGCAC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGGTGCAGGGGGTGGGGTaGGGCGAACCCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWVQGVG*GEPSSR
Trigger: CCGGGAGCTGGGTTCGCCCCACCCCACCCCCTGCAC...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCGCCTCCTGCCGGCTCTaGAAGGAAGCAGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPASCRL*KEAAAT
Trigger: GGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGAGGC...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGATGGTGGCCCCGGCCTaGGGGGCGTCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWMVAPA*GASGLQ
Trigger: CTGCAGCCCAGACGCCCCCCAGGCCGGGGCCACCAT...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTAAGTGGTACCAGTCCTaGACAGCCGCCACGCCTGAC +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLKWYQS*TAATPD
Trigger: GTCAGGCGTGGCGGCTGTCCAGGACTGGTACCACTT...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCACGAAGTGGCCGTCCTaGCTCCCGTGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPTKWPS*LPWLSS
Trigger: GGAGGACAGCCACGGGAGCCAGGACGGCCACTTCGT...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCGGTGGCCTCCGTCCCTaGCCGGACGCTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPGGLRP*PDAEAV
Trigger: CACAGCTTCAGCGTCCGGCCAGGGACGGAGGCCACC...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTCATCTGACTGGCCTCTaGCTTGATGCTGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPHLTGL*LDAGRP
Trigger: GGGGCGTCCAGCATCAAGCCAGAGGCCAGTCAGATG...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAAGAGTCTCAAGGGGCTaGGGCCCAGCCCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPRVSRG*GPAQLS
Trigger: AGAGAGCTGGGCTGGGCCCCAGCCCCTTGAGACTCT...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGCCCACCCTGGGCCGCTaGGGAGCCTGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWPTLGR*GACCCH
Trigger: GTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGG...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGTGGTCTGGCCCACCCTaGGCCGCTGGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAWSGPP*AAGEPA
Trigger: AGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAGACCA...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCTTCCTGGGCTGCTaGTCTGGCCCACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGACFLGC*SGPPWA
Trigger: GGCCCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCA...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCATGTCCAGCACTGGTaGATCCACATGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLHVQHW*IHMVLP
Trigger: GGGGAGGACCATGTGGATTCACCAGTGCTGGACATG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGCCCAGGACGTCGTCTTaGGGCGGTTCCCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWPRTSS*GGSRGS
Trigger: GCTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGG...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGACCGGGCGGTGCCAGTaGCGCTCAAAGAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHATGRCQ*RSKRSP
Trigger: GGGGCTCCTCTTTGAGCGTCACTGGCACCGCCCGGT...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGACAGCCGCCACGCCTaGCGTGTAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACADSRHA*RVASVK
Trigger: TTTTACCGAGGCTACACGTCAGGCGTGGCGGCTGTC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGTGATGCCGGGGCGCTaGGCTGTCCAGACGCCATCG +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARVMPGR*AVQTPS
Trigger: CGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCAC...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTTCCCAGTGGAGAGCTTaGATGCAGACTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPSQWRA*MQTPCR
Trigger: CCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGA...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCTCTGTCTGTGGCTCTaGTGCGGCAGCCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACALCLWL*CGSPCS
Trigger: TGAACAGGGGCTGCCGCATCAGAGCCACAGACAGAG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTTGGAGAGGAAAGCCATaGTGGAGTCACCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPWRGKP*WSHPGL
Trigger: CAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCA...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCACCAGCCCCTCCTGGTaGCCCTCCTTGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGATSPSW*PSLGGG
Trigger: ACCACCACCCAAGGAGGGGCACCAGGAGGGGCTGGT...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGGTGGCTGTCCTCCCATaGCGCGGGCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLVAVLP*RGQQGQ
Trigger: CTGGCCCTGCTGCCCGCGGCATGGGAGGACAGCCAC...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAAGGGCTCCCGAGCCGGTaGACCTCGTCCTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREGLPSR*TSSSRM
Trigger: CATCCGAGAGGACGAGGTGCACCGGCTCGGGAGCCC...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGGTGCCGGGCAGAGCTaGAGTACTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCGAGQS*STQPPP
Trigger: CGGCGGGGGCTGAGTACTGCAGCTCTGCCCGGCACC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CAGGCCATCGTAACTGCAGGAGAGGACGAAGTGGCCGTCCTGGCTCCCGTGGCTGGTGCCGGGCAGAGCTaGAGTACTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: QAIVTAGEDEVAVLAPVAGAGQS*STQPPP
Trigger: CGGCGGGGGCTGAGTACTGCAGCTCTGCCCGGCACC...AGCCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGGGTGCCGGGCAGAGCTaGAGTACTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWGAGQS*STQPPP
Trigger: CGGCGGGGGCTGAGTACTGCAGCTCTGCCCGGCACC...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCCCCCAAACCACAGGCTaGAGAGGCTGCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPPQTTG*RGCPWP
Trigger: CGGCCATGGGCAGCCTCTGCAGCCTGTGGTTTGGGG...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
68% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCCGGGTCATCTGACGTaGCGCCTGCAGGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCPGHLT*RLQAGA
Trigger: TGCCCCCGCCTGCAGGCGGCACGTCAGATGACCCGG...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTTGCTGCTGCCACAGCTaGAAGGACCAGGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPCCCHS*KDQAKR
Trigger: TCTCTTGGCCTGGTCCTTGCAGCTGTGGCAGCAGCA...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGCCGCTGGGGAGCCTaGTGCTGCCACAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAGRWGA*CCHSCK
Trigger: CTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCC...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCCACGGCCGCGTGTGCTaGTTCCTGGGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPHGRVC*FLGCWS
Trigger: AGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTG...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGCAGATGGGGCTGGGGTaGCTCTCCAAGCTCGCGGCA +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGQMGLG*LSKLAA
Trigger: TGCCGCGAGCTTGGAGAGGCACCCCAGCCCCATCTG...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325425.12
CDS-3UTR CCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGTCCTCCCCCTCTTCTaGGCCATCCCCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAVLPLF*AIPSLA
Trigger: GGCCAGCGAGGGGATGGCCCAGAAGAGGGGGAGGAC...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTAGAGGAAAGCCATGCTaGAGTCACCCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLRGKPC*SHPGLS
Trigger: GGACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCT...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCGCAGGATGGAGCCTCTaGCCTCCTGCCGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPAGWSL*PPAGSG
Trigger: TCCAGAGCCGGCAGGAGGCCAGAGGCTCCATCCTGC...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCCGGACTCGGCCGACGTaGGTTCCCGTCACACAGGGT +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGARTRPT*VPVTQG
Trigger: ACCCTGTGTGACGGGAACCCACGTCGGCCGAGTCCG...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCCGGACTCGGCCGACGTaGGTTCCCGTCACACAGGGT +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPRTRPT*VPVTQG
Trigger: ACCCTGTGTGACGGGAACCCACGTCGGCCGAGTCCG...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGACGAAGTGGCCGTCCTaGCTCCCGTGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGTKWPS*LPWLSS
Trigger: GGAGGACAGCCACGGGAGCCAGGACGGCCACTTCGT...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCAGCAGCTGCCGTAGGTaGGGTGGTGGAAGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPSSCRR*GGGRSG
Trigger: TCCGGACCTTCCACCACCCCACCTACGGCAGCTGCT...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGCGGACGCTGAAGCTGTaGTGCCCCAGGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGRTLKL*CPRKGV
Trigger: CACGCCCTTCCTGGGGCACCACAGCTTCAGCGTCCG...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGTGGCCTCCGTCCCTaGCCGGACGCTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARGGLRP*PDAEAV
Trigger: CACAGCTTCAGCGTCCGGCCAGGGACGGAGGCCACC...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTTCCATCCAGCTGACTTaGCGGAAGGCCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACASIQLT*RKATWR
Trigger: CCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGA...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCTGCAGAGGCTGCCCATaGCCGAGAGCAGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPCRGCP*PRAAAA
Trigger: TGCCGCAGCTGCTCTCGGCCATGGGCAGCCTCTGCA...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCATCTGACTGGCCTCTaGCTTGATGCTGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAHLTGL*LDAGRP
Trigger: GGGGCGTCCAGCATCAAGCCAGAGGCCAGTCAGATG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCGGAGATGAGGCCCGCTaGGCTCCGGGTCATCTGACG +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAGDEAR*APGHLT
Trigger: CGTCAGATGACCCGGAGCCCAGCGGGCCTCATCTCC...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCAGACACACGGAGCATaGGTACATCACCGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLQTHGA*VHHRVS
Trigger: CGACACGCGGTGATGTACCCATGCTCCGTGTGTCTG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGCCAGGTGAGCCTCCTTaGGCCGCTGAGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLPGEPP*AAEVAG
Trigger: CCCGGCCACCTCAGCGGCCCAAGGAGGCTCACCTGG...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAGCAGCTGCCACCGGTaGCGTCCTGGAGAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGSSCHR*RPGEES
Trigger: GCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCT...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGGCACAGAGACGGCCATaGGGACCGGGCGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWAQRRP*GPGGAS
Trigger: ACTGGCACCGCCCGGTCCTCATGGCCGTCTCTGTGC...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGCACAGAGACGGCCATaGGGACCGGGCGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCAQRRP*GPGGAS
Trigger: ACTGGCACCGCCCGGTCCTCATGGCCGTCTCTGTGC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCCTGGGGGTGATGCCGGGGCGCTaGGCTGTCCAGACGCCATCG +
Preference number: 4 (lower is better)
Translates to: HLEVPVESLNADSLQGLGVMPGR*AVQTPS
Trigger: CGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCAC...CCCCAGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAAGCTGCTGCTCAACCCTaGGGACCAGGCCGACTCCGT +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREAAAQP*GPGRLR
Trigger: ACGGAGTCGGCCTGGTCCTCAGGGTTGAGCAGCAGC...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCTCCCTGGCCGGACGCTaGAGCTGTGGTGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCSLAGR*SCGAPG
Trigger: TCCTGGGGCACCACAGCTTCAGCGTCCGGCCAGGGA...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGCGCCTCCTCCACTaGGCGGTAGTTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARGRLLH*AVVELL
Trigger: CAGGAGCTCAACTACCGCTCAGTGGAGGAGGCGCCC...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGGGCTCCGGGTCATCTaGCGTGCCGCCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQGLRVI*RAACRR
Trigger: CCGCCTGCAGGCGGCACGTCAGATGACCCGGAGCCC...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCAGCTCTCTTCGGCTaGGACTCCCGCCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREPALFG*DSRQNP
Trigger: GGGGTTCTGGCGGGAGTCTCAGCCGAAGAGAGCTGG...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGCCTCCTTGGGCCGCTaGGGTGGCCGGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQASLGR*GGRATG
Trigger: ACCTGTGGCCCGGCCACCTCAGCGGCCCAAGGAGGC...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGGCCCCGGGCATCAACTaGACTGTCCAGTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGAPGIN*TVQWSL
Trigger: GAGGCTCCACTGGACAGTGCAGTTGATGCCCGGGGC...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR GCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCATGGAGAGGAAAGCCATaGTGGAGTCACCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPWRGKP*WSHPGL
Trigger: CAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCA...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTTGGAGAGGAAAGCCATaGTGGAGTCACCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAWRGKP*WSHPGL
Trigger: CAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCA...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCCCGTCCATGCTTCGGTaGTCAGCCATTGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPPSMLR*SAIAGA
Trigger: TGCCCCCGCAATGGCTGAGCACCGAAGCATGGACGG...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGACCAGCCCCTCCTGGTaGCCCTCCTTGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHATSPSW*PSLGGG
Trigger: ACCACCACCCAAGGAGGGGCACCAGGAGGGGCTGGT...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCGAGTGGCTCAGCCTCTaGAGACGGATCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAEWLSL*RRISRS
Trigger: GGACCGGGAGATCCGTCTGCAGAGGCTGAGCCACTC...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCACCAGGCCATCGTAACTaGAGGAGAGGACGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPPGHRN*RRGRSG
Trigger: GCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTGG...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTGACCCGCTTCCCCGCCGGCGGTaGAGTGGCCGTAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VKAVAARAVAQSEPHSDPLPRRR*SGRRGS
Trigger: GGAGCCCCTACGGCCACTGCACCGCCGGCGGGGAAG...CGGGTCAGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGTCTCCACCATCAGCTaGTGGAAGCAGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAVSTIS*WKQDTR
Trigger: CCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGAGAC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCATGGCCGAGAGCAGCTaGGGCACCGAGTACACGGGC +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARMAESS*GTEYTG
Trigger: GCCCGTGTACTCGGTGCCGCAGCTGCTCTCGGCCAT...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTAGCAGCTGCCGTAGGTGGACAGGCTGCAGAGGCTaGCCATGGCCGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RGAELSRRHRPCSSCRRWTGCRG*PWPRAA
Trigger: AGCTGCTCTCGGCCATGGGCAGCCTCTGCAGCCTGT...CCACCTACGGCAGCTGCTACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACAGGCTGCAGAGGCTaGCCATGGCCGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPTGCRG*PWPRAA
Trigger: AGCTGCTCTCGGCCATGGGCAGCCTCTGCAGCCTGT...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACACGGCCGCGTGTGCTaGTTCCTGGGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREHGRVC*FLGCWS
Trigger: AGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTG...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGTGTGTCCGTGGGGCCTaGCTTGCCTTCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGCVRGA*LAFCLP
Trigger: AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACA...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGTGTCCGTGGGGCCTaGCTTGCCTTCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGACVRGA*LAFCLP
Trigger: AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACA...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CGGCGGTGCAGTGGCCGTAGGGGCTCCCGAGCCGGTGCACCTCGTCCTCTCGGAACAGCACTGCCCTCATaGCTCCTCCCTGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: RRCSGRRGSRAGAPRPLGTALPS*LLPAGI
Trigger: AATTCCAGCAGGGAGGAGGCATGAGGGCAGTGCTGT...TCCGAGAGGACGAGGTGCACCGGCTCGGGAGCCCCTACGGCCACTGCACCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGTGGAGCTTGGGGTCTaGCCGGTGTCCCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCVELGV*PVSPAG
Trigger: CCCAGCAGGGGACACCGGCCAGACCCCAAGCTCCAC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAATGGGAGTGTGGAGCTTaGGGTCTGGCCGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREWECGA*GLAGVP
Trigger: GGGGACACCGGCCAGACCCCAAGCTCCACACTCCCA...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGGATTCCCGTGGGCATaGGCAGGCCAGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCGFPWA*AGQGWP
Trigger: AGGCCACCCCTGGCCTGCCCATGCCCACGGGAATCC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCAGGTCGGGATTCCCGTaGGCATGGGCAGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCRSGFP*AWAGQG
Trigger: CCCCTGGCCTGCCCATGCCCACGGGAATCCCGACCT...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGTGACAGCACTGCCCTaGAGATGGCAGGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAVTALP*RWQAPG
Trigger: GCCAGGCGCCTGCCATCTCCAGGGCAGTGCTGTCAC...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TGCCGCGGGCAGCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGCCCGGTGCAGGGGGTaGGGTGGGGCGAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: CRGQQGQDIHIVEVVPVLARCRG*GGANPA
Trigger: AGCTGGGTTCGCCCCACCCCACCCCCTGCACCGGGC...CAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGCTGCCCGCGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCCCTGGTGCCCCTCCTTaGGTGGTGGTGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARPGAPP*VVVVVL
Trigger: CAGCACCACCACCACCACCCAAGGAGGGGCACCAGG...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GACTCCGTGGGTGATGCCGGGGCGCTGAGCTGTCCAGACGCCATCGACCGTGTACAGGAGAGGACGAAGTaGCCGTCCTGGCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: DSVGDAGALSCPDAIDRVQERTK*PSWLPW
Trigger: CCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTG...TACACGGTCGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCACCCACGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGGTGGCCTCCGTCCCTaGCCGGACGCTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCGGLRP*PDAEAV
Trigger: CACAGCTTCAGCGTCCGGCCAGGGACGGAGGCCACC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCGGTGGCCTCCGTCCCTaGCCGGACGCTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LAWPESIQLTWRKATWRSGGLRP*PDAEAV
Trigger: CACAGCTTCAGCGTCCGGCCAGGGACGGAGGCCACC...GGACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCCAGGCAGGCCTGCCTaGTGTAGGAGGTGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAPGRPA*CRRCCV
Trigger: TACACAACACCTCCTACACCAGGCAGGCCTGCCTGG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGTGGAAGCATCACCCGTaGGAGATGAGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGWKHHP*EMRPAG
Trigger: CCCAGCGGGCCTCATCTCCCACGGGTGATGCTTCCA...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAGAGTCTCAAGGGGCTaGGGCCCAGCCCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGRVSRG*GPAQLS
Trigger: AGAGAGCTGGGCTGGGCCCCAGCCCCTTGAGACTCT...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCACAGACACACGGAGCATaGGTACATCACCGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPQTHGA*VHHRVS
Trigger: CGACACGCGGTGATGTACCCATGCTCCGTGTGTCTG...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCGCCCAAGTGTGTCCGTaGGGCCTGCCTTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPAQVCP*GLPCLL
Trigger: CAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGC...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGTCTGGGCTGCAGCCTaGCCCTGTTTGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAVWAAA*PCLQAA
Trigger: CGCTGCCTGCAAACAGGGCCAGGCTGCAGCCCAGAC...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS-3UTR TCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCTGGTGCAGAAGAAGGTaGGCAGCTCCCGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPWCRRR*AAPGTR
Trigger: CCTCGTTCCGGGAGCTGCTCACCTTCTTCTGCACCA...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTCCCAGGACGTCGTCTTaGGGCGGTTCCCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPPRTSS*GGSRGS
Trigger: GCTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGG...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGTCCCGTCACACAGGGTaGCCAGCGGGAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLSRHTG*PAGAAC
Trigger: GCAAGCTGCTCCCGCTGGTCACCCTGTGTGACGGGA...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCGACAGCCGCCACGCCTaGCGTGTAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGADSRHA*RVASVK
Trigger: TTTTACCGAGGCTACACGTCAGGCGTGGCGGCTGTC...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGCCGACTCCGTGGGTaGTGCCGGGGCGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPGRLRG*CRGAEL
Trigger: CAGCTCAGCGCCCCGGCATCACCCACGGAGTCGGCC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCGGCCGACTCCGTGGGTaGTGCCGGGGCGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAGRLRG*CRGAEL
Trigger: CAGCTCAGCGCCCCGGCATCACCCACGGAGTCGGCC...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCCTGGGGGCTGCTGCTCAACCCTaGGGACCAGGCCGACTCCGT +
Preference number: 4 (lower is better)
Translates to: HLEVPVESLNADSLQGLGAAAQP*GPGRLR
Trigger: ACGGAGTCGGCCTGGTCCTCAGGGTTGAGCAGCAGC...CCCCAGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp CAGGCCATCGTAACTGCAGGAGAGGACGAAGTGGCCGTCCTGGCTCCCGTGGCTCGTCCTCTCGGATGCTaGTGGTGGCCTCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QAIVTAGEDEVAVLAPVARPLGC*WWPPSL
Trigger: CAGGGACGGAGGCCACCATCAGCATCCGAGAGGACG...AGCCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCCAGAGTCCATCCAGCTaGCTTGGCGGAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAQSPSS*LGGRPP
Trigger: AGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTG...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGCGCCTAGCACCAGGGTaGGGGCAGAAGCATCGAGCA +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHARLAPG*GQKHRA
Trigger: TGCTCGATGCTTCTGCCCTCACCCTGGTGCTAGGCG...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGCAGGCGGGGGCATCTaGCTGGCCTCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCAGGGI*LASGLM
Trigger: CATCAAGCCAGAGGCCAGTCAGATGCCCCCGCCTGC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGGCTCCGGGTCATCTaGCGTGCCGCCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPGLRVI*RAACRR
Trigger: CCGCCTGCAGGCGGCACGTCAGATGACCCGGAGCCC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCCAGCTCTCTTCGGCTaGGACTCCCGCCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCPALFG*DSRQNP
Trigger: GGGGTTCTGGCGGGAGTCTCAGCCGAAGAGAGCTGG...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTCCATTCTCCCGTCCATaGTTCGGTGCTCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACAPFSRP*FGAQPL
Trigger: CAATGGCTGAGCACCGAAGCATGGACGGGAGAATGG...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCCCAGCGGGAGCAGCTTaGGCTCCGAGTGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARPAGAA*APSAQR
Trigger: TCTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGG...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAAGGCCACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCGGGCTCCCGAGCCGGTaGACCTCGTCCTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: EGHLEVPVESLNADSLQGGLPSR*TSSSRM
Trigger: CATCCGAGAGGACGAGGTGCACCGGCTCGGGAGCCC...GCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTGGCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTAGTGGAGAGCTTGAATaGAGACTCCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LTRGADMPGACLPTAACASGELE*RLPAGP
Trigger: AGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACT...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGACAGGCTGCAGAGGCTaGCCATGGCCGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHATGCRG*PWPRAA
Trigger: AGCTGCTCTCGGCCATGGGCAGCCTCTGCAGCCTGT...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCCCCAAACCACAGGCTaGAGAGGCTGCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PSVARVHPADLAEGHLEVPQTTG*RGCPWP
Trigger: CGGCCATGGGCAGCCTCTGCAGCCTGTGGTTTGGGG...GACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCGCTGGGGAGCCTGCTaGTGCCACAGCTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCRWGAC*CHSCKD
Trigger: GTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCG...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGTGTGTCCGTGGGGCCTaGCTTGCCTTCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHACVRGA*LAFCLP
Trigger: AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACA...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGCCCGGTGCAGGGGGTaGGGTGGGGCGAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHARCRG*GGANPA
Trigger: AGCTGGGTTCGCCCCACCCCACCCCCTGCACCGGGC...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TCTGTCTGTGGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCGTCCTCCCCCTCTTCTaGGCCATCCCCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SVCGSDAAAPVHLAWPESVLPLF*AIPSLA
Trigger: GGCCAGCGAGGGGATGGCCCAGAAGAGGGGGAGGAC...GGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCCACAGACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCAGAGGAAAGCCATGCTaGAGTCACCCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPRGKPC*SHPGLS
Trigger: GGACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCT...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGCCTCCTGCCGGCTCTaGAAGGAAGCAGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCASCRL*KEAAAT
Trigger: GGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGAGGC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAGCTCTGAAGCAGGATaGAGCCTCTGGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGSSEAG*SLWPPA
Trigger: GGCAGGAGGCCAGAGGCTCCATCCTGCTTCAGAGCT...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCATGGTGGCCCCGGCCTaGGGGGCGTCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAMVAPA*GASGLQ
Trigger: CTGCAGCCCAGACGCCCCCCAGGCCGGGGCCACCAT...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACCGTGGCGGGGGACAGTaGCGGAGAGGGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHRGGGQ*RRGRLC
Trigger: GCAGAGCCGCCCTCTCCGCCACTGTCCCCCGCCACG...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCACGTGGCGGGGGACAGTaGCGGAGAGGGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AGPGYPHSGSGTSPGQPPRGGGQ*RRGRLC
Trigger: GCAGAGCCGCCCTCTCCGCCACTGTCCCCCGCCACG...TGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp AGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTGCAGGAGAGGAACCCGGCTGCCCGAGTaGCTCAGCCTCTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: RSGTVGPGSPGHRNCRRGTRLPE*LSLCRR
Trigger: CCGTCTGCAGAGGCTGAGCCACTCGGGCAGCCGGGT...TCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CCTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCGGACGCTGAAGCTGTaGTGCCCCAGGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PSVARVHPADLAEGHLEVRTLKL*CPRKGV
Trigger: CACGCCCTTCCTGGGGCACCACAGCTTCAGCGTCCG...GACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCTCCATCCAGCTGACTTaGCGGAAGGCCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPSIQLT*RKATWR
Trigger: CCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGA...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCTGCAGAGGCTGCCCATaGCCGAGAGCAGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: PSVARVHPADLAEGHLEVCRGCP*PRAAAA
Trigger: TGCCGCAGCTGCTCTCGGCCATGGGCAGCCTCTGCA...GACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGGGAGATGAGGCCCGCTaGGCTCCGGGTCATCTGACG +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWGDEAR*APGHLT
Trigger: CGTCAGATGACCCGGAGCCCAGCGGGCCTCATCTCC...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCTGGAAGCATCACCCGTaGGAGATGAGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARWKHHP*EMRPAG
Trigger: CCCAGCGGGCCTCATCTCCCACGGGTGATGCTTCCA...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCTCCCGCCAGAACCCCTaGAAGCATCACCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARSRQNP*KHHPWE
Trigger: CTCCCACGGGTGATGCTTCCAGGGGTTCTGGCGGGA...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCACCCACCCTGGGCCGCTaGGGAGCCTGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPPTLGR*GACCCH
Trigger: GTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGG...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGTGGTCTGGCCCACCCTaGGCCGCTGGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQWSGPP*AAGEPA
Trigger: AGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAGACCA...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCCCCAGGCAGTGTAGGTaGTTTGACCAGAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPPRQCR*FDQRRR
Trigger: TCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGG...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGAGCAGCTGCCACCGGTaGCGTCCTGGAGAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWSSCHR*RPGEES
Trigger: GCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCT...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCATGGTGGTGGTGGTGCTaGTGGTGGCCCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGPGYPHSGSGTSPGQPPWWWWC*WWPRPG
Trigger: CCCAGGCCGGGGCCACCATCAGCACCACCACCACCA...TGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGACCGGGCGGTGCCAGTaGCGCTCAAAGAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQTGRCQ*RSKRSP
Trigger: GGGGCTCCTCTTTGAGCGTCACTGGCACCGCCCGGT...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGACAGCCGCCACGCCTaGCGTGTAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHADSRHA*RVASVK
Trigger: TTTTACCGAGGCTACACGTCAGGCGTGGCGGCTGTC...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGTGATGCCGGGGCGCTaGGCTGTCCAGACGCCATCG +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQVMPGR*AVQTPS
Trigger: CGATGGCGTCTGGACAGCTCAGCGCCCCGGCATCAC...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TGCCGCGGGCAGCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGTCCCTGGCCGGACGCTaGAGCTGTGGTGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CRGQQGQDIHIVEVVPVLSLAGR*SCGAPG
Trigger: TCCTGGGGCACCACAGCTTCAGCGTCCGGCCAGGGA...CAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGCTGCCCGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGTCCTCTCGGATGCTaGTGGTGGCCTCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLRPLGC*WWPPSL
Trigger: CAGGGACGGAGGCCACCATCAGCATCCGAGAGGACG...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTCCCAGTGGAGAGCTTaGATGCAGACTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGASQWRA*MQTPCR
Trigger: CCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGA...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGTCCCAGTGGAGAGCTTaGATGCAGACTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGSQWRA*MQTPCR
Trigger: CCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGA...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGCTCTGTCTGTGGCTCTaGTGCGGCAGCCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHALCLWL*CGSPCS
Trigger: TGAACAGGGGCTGCCGCATCAGAGCCACAGACAGAG...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTGCAGGAGAGGAGGGCGCCTCCTCCACTaGGCGGTAGTTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSGTVGPGSPGHRNCRRGGRLLH*AVVELL
Trigger: CAGGAGCTCAACTACCGCTCAGTGGAGGAGGCGCCC...TCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGGACTGGCCTCTGGCTTaGTGCTGGACGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLDWPLA*CWTPLR
Trigger: CCTCAGGGGCGTCCAGCATCAAGCCAGAGGCCAGTC...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGGGGCTCCGGGTCATCTaGCGTGCCGCCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVGLRVI*RAACRR
Trigger: CCGCCTGCAGGCGGCACGTCAGATGACCCGGAGCCC...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCGGGCTCCGGGTCATCTaGCGTGCCGCCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLGLRVI*RAACRR
Trigger: CCGCCTGCAGGCGGCACGTCAGATGACCCGGAGCCC...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCCAGGCAGCGTTGTGCTaGGTGGGTCTGTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARQAALC*VGLCCH
Trigger: ATGGCAGCACAGACCCACTCAGCACAACGCTGCCTG...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS-3UTR TCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCCGGTGTTGTCTTCTGTaGCAGCACTGCCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGARCCLL*QHCPHA
Trigger: GGCATGAGGGCAGTGCTGTCACAGAAGACAACACCG...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379116.10
CDS-3UTR GCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGTCCCTCTGGGGTCCTaGACCCAGGCAGGTGAACAG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCVPLGS*TQAGEQ
Trigger: CTGTTCACCTGCCTGGGTGCAGGACCCCAGAGGGAC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR GCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGACCAGCCCCTCCTGGTaGCCCTCCTTGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLTSPSW*PSLGGG
Trigger: ACCACCACCCAAGGAGGGGCACCAGGAGGGGCTGGT...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCCCAGCGGGAGCAGCTTaGGCTCCGAGTGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: LAWPESIQLTWRKATWRSPAGAA*APSAQR
Trigger: TCTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGG...GGACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGTGGCTGTCCTCCCATaGCGCGGGCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPVAVLP*RGQQGQ
Trigger: CTGGCCCTGCTGCCCGCGGCATGGGAGGACAGCCAC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCCCAGGCCATCGTAACTaGAGGAGAGGACGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAPGHRN*RRGRSG
Trigger: GCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTGG...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCCGACCGTGTAGCAGCTaGCGTAGGTGGGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LAWPESIQLTWRKATWRSRPCSS*RRWGGG
Trigger: TCCACCACCCCACCTACGGCAGCTGCTACACGGTCG...GGACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGGGCTCCCGAGCCGGTaGACCTCGTCCTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPGLPSR*TSSSRM
Trigger: CATCCGAGAGGACGAGGTGCACCGGCTCGGGAGCCC...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCGTCTCCACCATCAGCTaGTGGAAGCAGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPVSTIS*WKQDTR
Trigger: CCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGAGAC...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGGTGCCGGGCAGAGCTaGAGTACTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHGAGQS*STQPPP
Trigger: CGGCGGGGGCTGAGTACTGCAGCTCTGCCCGGCACC...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCAGTGGAGAGCTTGAATaGAGACTCCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPSGELE*RLPAGP
Trigger: AGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACT...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACAGGAGAACCACGCCCTaGGGAGCCGGCGGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHRRTTP*GAGGRL
Trigger: TAGGCGGCCGCCGGCTCCGCAGGGCGTGGTTCTCCT...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCTGCTGCTGCCACAGCTaGAAGGACCAGGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPCCCHS*KDQAKR
Trigger: TCTCTTGGCCTGGTCCTTGCAGCTGTGGCAGCAGCA...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGTGGGGAGCCTGCTGCTaGCACAGCTGCAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWWGACC*HSCKDQ
Trigger: CTGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCA...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTACACACGTACACAGGTaGATCAGACGTGTGGACATG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLTHVHR*IRRVDM
Trigger: CATGTCCACACGTCTGATGCACCTGTGTACGTGTGT...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGCAGCCTGGCCCTGTTTaGAGGCAGCGTTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAQPGPV*RQRCAE
Trigger: CTCAGCACAACGCTGCCTGCAAACAGGGCCAGGCTG...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS-3UTR CCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGCCTGGGGTCCCTCTaGGGTCCTGCACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPGLGSL*GPAPRQ
Trigger: CTGCCTGGGTGCAGGACCCCAGAGGGACCCCAGGCC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGGCGCCTGGCATCTGTaGGACCCCAGCCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQGAWHL*DPSQDL
Trigger: GAGGTCCTGGCTGGGGTCCCACAGATGCCAGGCGCC...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGGAGATGGCAGGCGCCTaGCATCTGTGGGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLEMAGA*HLWDPS
Trigger: GCTGGGGTCCCACAGATGCCAGGCGCCTGCCATCTC...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGTCCTCCCCCTCTTCTaGGCCATCCCCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQVLPLF*AIPSLA
Trigger: GGCCAGCGAGGGGATGGCCCAGAAGAGGGGGAGGAC...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGGCAGGATGGAGCCTCTaGCCTCCTGCCGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLAGWSL*PPAGSG
Trigger: TCCAGAGCCGGCAGGAGGCCAGAGGCTCCATCCTGC...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAAGGCCACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCCCTGGTGCCCCTCCTTaGGTGGTGGTGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EGHLEVPVESLNADSLQGPGAPP*VVVVVL
Trigger: CAGCACCACCACCACCACCCAAGGAGGGGCACCAGG...GCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp GAAGGCCACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCCGGACTCGGCCGACGTaGGTTCCCGTCACACAGGGT +
Preference number: 4 (lower is better)
Translates to: EGHLEVPVESLNADSLQGRTRPT*VPVTQG
Trigger: ACCCTGTGTGACGGGAACCCACGTCGGCCGAGTCCG...GCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTGGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCGTGGCGGGGGACAGTaGCGGAGAGGGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLRGGGQ*RRGRLC
Trigger: GCAGAGCCGCCCTCTCCGCCACTGTCCCCCGCCACG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTACCCGGCTGCCCGAGTaGCTCAGCCTCTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPTRLPE*LSLCRR
Trigger: CCGTCTGCAGAGGCTGAGCCACTCGGGCAGCCGGGT...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGACGAAGTGGCCGTCCTaGCTCCCGTGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLTKWPS*LPWLSS
Trigger: GGAGGACAGCCACGGGAGCCAGGACGGCCACTTCGT...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCAGGAGAGGACGAAGTaGCCGTCCTGGCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLQERTK*PSWLPW
Trigger: CCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTG...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGAGCAGCTGCCGTAGGTaGGGTGGTGGAAGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWSSCRR*GGGRSG
Trigger: TCCGGACCTTCCACCACCCCACCTACGGCAGCTGCT...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCAGCAGCTGCCGTAGGTaGGGTGGTGGAAGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: LAWPESIQLTWRKATWRSSSCRR*GGGRSG
Trigger: TCCGGACCTTCCACCACCCCACCTACGGCAGCTGCT...GGACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGGACGCTGAAGCTGTaGTGCCCCAGGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLRTLKL*CPRKGV
Trigger: CACGCCCTTCCTGGGGCACCACAGCTTCAGCGTCCG...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCTCCACCATCAGCTGCTaGAAGCAGGACACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPSTISC*KQDTRQ
Trigger: CTGCCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGA...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTCCACCATCAGCTGCTaGAAGCAGGACACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGASTISC*KQDTRQ
Trigger: CTGCCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGA...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGTGGCGGAAGGCCACCTaGAGGTCCCAGTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWWRKAT*RSQWRA
Trigger: AGCTCTCCACTGGGACCTCCAGGTGGCCTTCCGCCA...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGTGCAGAGGCTGCCCATaGCCGAGAGCAGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLCRGCP*PRAAAA
Trigger: TGCCGCAGCTGCTCTCGGCCATGGGCAGCCTCTGCA...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCCAGCCCTGGCAGGTCTaGTTCAGGTGTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPQPWQV*FRCPES
Trigger: AGACTCTGGACACCTGAACCAGACCTGCCAGGGCTG...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCCACCCTGGGCCGCTaGGGAGCCTGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLPTLGR*GACCCH
Trigger: GTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACTGGTCTGGCCCACCCTaGGCCGCTGGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHWSGPP*AAGEPA
Trigger: AGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAGACCA...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTTGCTTCCTGGGCTGCTaGTCTGGCCCACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPCFLGC*SGPPWA
Trigger: GGCCCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCA...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGTCACAGCTTCGTCACTaGCTGTGTGGCCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGSQLRH*LCGLPE
Trigger: CTCGGGAAGGCCACACAGCCAGTGACGAAGCTGTGA...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325425.12
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGCAGCGTTGTGCTGAGTaGGTCTGTGCTGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGQRCAE*VCAAIP
Trigger: AGGGATGGCAGCACAGACCCACTCAGCACAACGCTG...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS-3UTR CCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCACCAGGTGAGCCTCCTTaGGCCGCTGAGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPPGEPP*AAEVAG
Trigger: CCCGGCCACCTCAGCGGCCCAAGGAGGCTCACCTGG...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGTGGTGGTGGTGGTGCTaGTGGTGGCCCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVWWWWC*WWPRPG
Trigger: CCCAGGCCGGGGCCACCATCAGCACCACCACCACCA...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCAACCGGGCGGTGCCAGTaGCGCTCAAAGAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGPGYPHSGSGTSPGQPPTGRCQ*RSKRSP
Trigger: GGGGCTCCTCTTTGAGCGTCACTGGCACCGCCCGGT...TGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp GCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCAGCACAGAGACGGCCATaGGGACCGGGCGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: AGPGYPHSGSGTSPGQPPAQRRP*GPGGAS
Trigger: ACTGGCACCGCCCGGTCCTCATGGCCGTCTCTGTGC...TGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGTCCCGTCACACAGGGTaGCCAGCGGGAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQSRHTG*PAGAAC
Trigger: GCAAGCTGCTCCCGCTGGTCACCCTGTGTGACGGGA...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCTGCTGCTCAACCCTaGGGACCAGGCCGACTCCGT +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPAAAQP*GPGRLR
Trigger: ACGGAGTCGGCCTGGTCCTCAGGGTTGAGCAGCAGC...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCGTGTGGTTACGGCCGTaGACCATGACCCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: LAWPESIQLTWRKATWRSVWLRP*TMTLMP
Trigger: CGGCATCAGGGTCATGGTTCACGGCCGTAACCACAC...GGACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACTCCCTGGCCGGACGCTaGAGCTGTGGTGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHSLAGR*SCGAPG
Trigger: TCCTGGGGCACCACAGCTTCAGCGTCCGGCCAGGGA...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGTCCCAGTGGAGAGCTTaGATGCAGACTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHASQWRA*MQTPCR
Trigger: CCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGA...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGCAGAGTCCATCCAGCTaGCTTGGCGGAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWQSPSS*LGGRPP
Trigger: AGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTG...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGATCACCCGTGGGAGATaGGGCCCGCTGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVITRGR*GPLGSG
Trigger: CCCGGAGCCCAGCGGGCCTCATCTCCCACGGGTGAT...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCCTGGGACGGTTCTGGTaGAATAGACAGGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGALGRFW*NRQAAQ
Trigger: TTGGGCTGCCTGTCTATTGCACCAGAACCGTCCCAG...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR GCA 90 bp TCTGTCTGTGGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCGAGCCTCTGGCCTCCTaGCGGCTCTGGAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SVCGSDAAAPVHLAWPESEPLAS*RLWKEA
Trigger: TGCTTCCTTCCAGAGCCGGCAGGAGGCCAGAGGCTC...GGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCCACAGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp TCTGTCTGTGGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCCCGTCCATGCTTCGGTaGTCAGCCATTGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SVCGSDAAAPVHLAWPESPSMLR*SAIAGA
Trigger: TGCCCCCGCAATGGCTGAGCACCGAAGCATGGACGG...GGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCCACAGACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp GTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTGACCCGACCAGCCCCTCCTGGTaGCCCTCCTTGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VKAVAARAVAQSEPHSDPTSPSW*PSLGGG
Trigger: ACCACCACCCAAGGAGGGGCACCAGGAGGGGCTGGT...CGGGTCAGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGGGCTCCCGAGCCGGTaGACCTCGTCCTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHGLPSR*TSSSRM
Trigger: CATCCGAGAGGACGAGGTGCACCGGCTCGGGAGCCC...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGGCCGCTGGGGAGCCTaGTGCTGCCACAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHGRWGA*CCHSCK
Trigger: CTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCC...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTCACGGCCGCGTGTGCTaGTTCCTGGGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPHGRVC*FLGCWS
Trigger: AGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTG...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCAGCCTGGCCCTGTTTaGAGGCAGCGTTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCQPGPV*RQRCAE
Trigger: CTCAGCACAACGCTGCCTGCAAACAGGGCCAGGCTG...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS-3UTR CCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCCATGTGGGGGTCCTGTaGTCACTGCACCATGACCAG +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARHVGVL*SLHHDQ
Trigger: CTGGTCATGGTGCAGTGACCACAGGACCCCCACATG...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGGTGCAGGGGGTGGGGTaGGGCGAACCCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALVQGVG*GEPSSR
Trigger: CCGGGAGCTGGGTTCGCCCCACCCCACCCCCTGCAC...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGACTGGTGAATCCACATaGTCCTCCCCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HGYITACRHVQPHSCARGTGEST*SSPSSG
Trigger: CCCAGAAGAGGGGGAGGACCATGTGGATTCACCAGT...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCCTCGGTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTGCAGGATGGAGCCTCTaGCCTCCTGCCGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ASVKAVAARAVAQSEPHSAGWSL*PPAGSG
Trigger: TCCAGAGCCGGCAGGAGGCCAGAGGCTCCATCCTGC...AGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTACCGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGAGCTCTGAAGCAGGATaGAGCCTCTGGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWSSEAG*SLWPPA
Trigger: GGCAGGAGGCCAGAGGCTCCATCCTGCTTCAGAGCT...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCCTGGGGAGCTCTGAAGCAGGATaGAGCCTCTGGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HLEVPVESLNADSLQGLGSSEAG*SLWPPA
Trigger: GGCAGGAGGCCAGAGGCTCCATCCTGCTTCAGAGCT...CCCCAGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCAGCTCTGAAGCAGGATaGAGCCTCTGGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCSSEAG*SLWPPA
Trigger: GGCAGGAGGCCAGAGGCTCCATCCTGCTTCAGAGCT...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCTGGTGCCCCTCCTTaGGTGGTGGTGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQPGAPP*VVVVVL
Trigger: CAGCACCACCACCACCACCCAAGGAGGGGCACCAGG...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTGACCCGTCCAGCAGCTCCAGATaGCGGAGGACCGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: VKAVAARAVAQSEPHSDPSSSSR*RRTGLG
Trigger: GCCGAGTCCGGTCCTCCGCCATCTGGAGCTGCTGGA...CGGGTCAGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAAGTCAATGTTCTCCCTaGCAAACTCGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPSQCSP*QTRPAA
Trigger: AGCTGCTGGACGAGTTTGCCAGGGAGAACATTGACT...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACACCCGGCTGCCCGAGTaGCTCAGCCTCTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHTRLPE*LSLCRR
Trigger: CCGTCTGCAGAGGCTGAGCCACTCGGGCAGCCGGGT...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCAAGTGGTACCAGTCCTaGACAGCCGCCACGCCTGAC +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCKWYQS*TAATPD
Trigger: GTCAGGCGTGGCGGCTGTCCAGGACTGGTACCACTT...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTACGAAGTGGCCGTCCTaGCTCCCGTGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPTKWPS*LPWLSS
Trigger: GGAGGACAGCCACGGGAGCCAGGACGGCCACTTCGT...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTCAGGAGAGGACGAAGTaGCCGTCCTGGCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPQERTK*PSWLPW
Trigger: CCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTG...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp AGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTGCAGGAGAGGATGGCGGAAGGCCACCTaGAGGTCCCAGTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RSGTVGPGSPGHRNCRRGWRKAT*RSQWRA
Trigger: AGCTCTCCACTGGGACCTCCAGGTGGCCTTCCGCCA...TCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGTCCATCCAGCTGACTTaGCGGAAGGCCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWSIQLT*RKATWR
Trigger: CCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGA...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCATCTGACTGGCCTCTaGCTTGATGCTGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCHLTGL*LDAGRP
Trigger: GGGGCGTCCAGCATCAAGCCAGAGGCCAGTCAGATG...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCTGGTCTGGCCCACCCTaGGCCGCTGGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLWSGPP*AAGEPA
Trigger: AGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAGACCA...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCTCCCTGCAGCTGAGGTaGCTAGGCTTGACACACGTA +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPSLQLR*LGLTHV
Trigger: TACGTGTGTCAAGCCTAGCCACCTCAGCTGCAGGGA...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCCGGTGTTGTCTTCTGTaGCAGCACTGCCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARRCCLL*QHCPGD
Trigger: ATCTCCAGGGCAGTGCTGTCACAGAAGACAACACCG...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR TCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGACCTCCTTGGGCCGCTaGGGTGGCCGGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALTSLGR*GGRATG
Trigger: ACCTGTGGCCCGGCCACCTCAGCGGCCCAAGGAGGT...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR TCA 90 bp TGCCGCGGGCAGCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGAGCAGCTGCCACCGGTaGCGTCCTGGAGAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: CRGQQGQDIHIVEVVPVLSSCHR*RPGEES
Trigger: GCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCT...CAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGCTGCCCGCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGTGGTGCAGAAGAAGGTaGGCAGCTCCCGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLWCRRR*AAPGTR
Trigger: CCTCGTTCCGGGAGCTGCTCACCTTCTTCTGCACCA...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TCTGTCTGTGGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCTGGTGCAGAAGAAGGTaGGCAGCTCCCGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: SVCGSDAAAPVHLAWPESWCRRR*AAPGTR
Trigger: CCTCGTTCCGGGAGCTGCTCACCTTCTTCTGCACCA...GGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCCACAGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCATCCCGTCACACAGGGTaGCCAGCGGGAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPSRHTG*PAGAAC
Trigger: GCAAGCTGCTCCCGCTGGTCACCCTGTGTGACGGGA...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTGCAGGAGAGGAGACAGCCGCCACGCCTaGCGTGTAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: RSGTVGPGSPGHRNCRRGDSRHA*RVASVK
Trigger: TTTTACCGAGGCTACACGTCAGGCGTGGCGGCTGTC...TCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGCTGCTGCTCAACCCTaGGGACCAGGCCGACTCCGT +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHAAAQP*GPGRLR
Trigger: ACGGAGTCGGCCTGGTCCTCAGGGTTGAGCAGCAGC...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGTCCCTGGCCGGACGCTaGAGCTGTGGTGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVSLAGR*SCGAPG
Trigger: TCCTGGGGCACCACAGCTTCAGCGTCCGGCCAGGGA...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTGCAGGAGAGGACTCTGTCTGTGGCTCTaGTGCGGCAGCCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RSGTVGPGSPGHRNCRRGLCLWL*CGSPCS
Trigger: TGAACAGGGGCTGCCGCATCAGAGCCACAGACAGAG...TCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGCCTGGTAGACGATGTTaGTTTTGGCCAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAPGRRC*FWPGCS
Trigger: GGAGCAGCCTGGCCAAAATCAACATCGTCTACCAGG...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCACTGAGCGGTAGTTaGGCTCCTGGTAGACGATGT +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTREPLSGS*APGRRC
Trigger: ACATCGTCTACCAGGAGCTCAACTACCGCTCAGTGG...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGCCACTGAGCGGTAGTTaGGCTCCTGGTAGACGATGT +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAPLSGS*APGRRC
Trigger: ACATCGTCTACCAGGAGCTCAACTACCGCTCAGTGG...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGGCGCCTCCTCCACTaGGCGGTAGTTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPGRLLH*AVVELL
Trigger: CAGGAGCTCAACTACCGCTCAGTGGAGGAGGCGCCC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGCAGGCGGGGGCATCTaGCTGGCCTCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHAGGGI*LASGLM
Trigger: CATCAAGCCAGAGGCCAGTCAGATGCCCCCGCCTGC...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCCTGGGGCGGTGTTGTCTTCTGTaGCAGCACTGCCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: HLEVPVESLNADSLQGLGRCCLL*QHCPHA
Trigger: GGCATGAGGGCAGTGCTGTCACAGAAGACAACACCG...CCCCAGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCCCATTCTCCCGTCCATaGTTCGGTGCTCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARPFSRP*FGAQPL
Trigger: CAATGGCTGAGCACCGAAGCATGGACGGGAGAATGG...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTGACCCGGAGTGGCTCAGCCTCTaGAGACGGATCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: VKAVAARAVAQSEPHSDPEWLSL*RRISRS
Trigger: GGACCGGGAGATCCGTCTGCAGAGGCTGAGCCACTC...CGGGTCAGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTCGACCGTGTAGCAGCTaGCGTAGGTGGGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPRPCSS*RRWGGG
Trigger: TCCACCACCCCACCTACGGCAGCTGCTACACGGTCG...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGGTCTCCACCATCAGCTaGTGGAAGCAGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLVSTIS*WKQDTR
Trigger: CCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGAGAC...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGTCTCCACCATCAGCTaGTGGAAGCAGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCVSTIS*WKQDTR
Trigger: CCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGAGAC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGAGTGGAGAGCTTGAATaGAGACTCCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHASGELE*RLPAGP
Trigger: AGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACT...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAATGGCCGAGAGCAGCTaGGGCACCGAGTACACGGGC +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPMAESS*GTEYTG
Trigger: GCCCGTGTACTCGGTGCCGCAGCTGCTCTCGGCCAT...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCAATGGCCGAGAGCAGCTaGGGCACCGAGTACACGGGC +
Preference number: 4 (lower is better)
Translates to: AGPGYPHSGSGTSPGQPPMAESS*GTEYTG
Trigger: GCCCGTGTACTCGGTGCCGCAGCTGCTCTCGGCCAT...TGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCATGGCCGAGAGCAGCTaGGGCACCGAGTACACGGGC +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAMAESS*GTEYTG
Trigger: GCCCGTGTACTCGGTGCCGCAGCTGCTCTCGGCCAT...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCGGGTCATCTGACGTaGCGCCTGCAGGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALPGHLT*RLQAGA
Trigger: TGCCCCCGCCTGCAGGCGGCACGTCAGATGACCCGG...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACTGCTGCTTCCTGGGCTaGTGGTCTGGCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHCCFLG*WSGPPW
Trigger: CCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCAGCA...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCCCTGGTGGCTTCATCTaGGATAAGACCTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPPGGFI*DKTFIC
Trigger: GCAGATGAAGGTCTTATCGCAGATGAAGCCACCAGG...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000379116.10
CDS-3UTR CCA 90 bp GGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCATGCCTCCTCCCTGCTaGAATTCAGGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: GSVGGLTRGADMPGACLPMPPPC*NSGTAS
Trigger: TGATGCTGTGCCTGAATTCCAGCAGGGAGGAGGCAT...GGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338555.6
ENST00000379116.10
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACACGGGCAGGCATCCCTaGCTCCCTTTGGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHTGRHP*LPLGPC
Trigger: GCATGGGCCCAAAGGGAGCCAGGGATGCCTGCCCGT...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGAGAGGAAAGCCATGCTaGAGTCACCCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWRGKPC*SHPGLS
Trigger: GGACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCT...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCCTGGGGAGAGGAAAGCCATGCTaGAGTCACCCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HLEVPVESLNADSLQGLGRGKPC*SHPGLS
Trigger: GGACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCT...CCCCAGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCTCCTGCCGGCTCTaGAAGGAAGCAGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPASCRL*KEAAAT
Trigger: GGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGAGGC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCAGCCTCCTGCCGGCTCTaGAAGGAAGCAGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: AGPGYPHSGSGTSPGQPPASCRL*KEAAAT
Trigger: GGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGAGGC...TGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGACCCGGCTGCCCGAGTaGCTCAGCCTCTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVTRLPE*LSLCRR
Trigger: CCGTCTGCAGAGGCTGAGCCACTCGGGCAGCCGGGT...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCAACGAAGTGGCCGTCCTaGCTCCCGTGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGPGYPHSGSGTSPGQPPTKWPS*LPWLSS
Trigger: GGAGGACAGCCACGGGAGCCAGGACGGCCACTTCGT...TGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCCGGACGCTGAAGCTGTaGTGCCCCAGGAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSARTLKL*CPRKGV
Trigger: CACGCCCTTCCTGGGGCACCACAGCTTCAGCGTCCG...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCCCAGGCAGGCCTGCCTaGTGTAGGAGGTGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: LAWPESIQLTWRKATWRSPGRPA*CRRCCV
Trigger: TACACAACACCTCCTACACCAGGCAGGCCTGCCTGG...GGACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CAGGCCATCGTAACTGCAGGAGAGGACGAAGTGGCCGTCCTGGCTCCCGTGGCTTCCACCATCAGCTGCTaGAAGCAGGACACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QAIVTAGEDEVAVLAPVASTISC*KQDTRQ
Trigger: CTGCCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGA...AGCCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CCTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCCTGTTCACCTAGCGTaGCCAGAGTCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSVARVHPADLAEGHLEVPVHLA*PESIQL
Trigger: CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGG...GACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGCCTGTTCACCTAGCGTaGCCAGAGTCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWPVHLA*PESIQL
Trigger: CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGG...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGTGGAAGCATCACCCGTaGGAGATGAGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQWKHHP*EMRPAG
Trigger: CCCAGCGGGCCTCATCTCCCACGGGTGATGCTTCCA...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGAGAGTCTCAAGGGGCTaGGGCCCAGCCCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQRVSRG*GPAQLS
Trigger: AGAGAGCTGGGCTGGGCCCCAGCCCCTTGAGACTCT...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCGAGATCGCACAGCCCTaGCAGGTCTGGTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCEIAQP*QVWFRC
Trigger: ACACCTGAACCAGACCTGCCAGGGCTGTGCGATCTC...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGTGCTTCCTGGGCTGCTaGTCTGGCCCACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVCFLGC*SGPPWA
Trigger: GGCCCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCA...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCTGCTTCCTGGGCTGCTaGTCTGGCCCACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLCFLGC*SGPPWA
Trigger: GGCCCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCA...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCCAGGCAGTGTAGGTaGTTTGACCAGAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLPRQCR*FDQRRR
Trigger: TCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGG...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCAGACACACGGAGCATaGGTACATCACCGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCQTHGA*VHHRVS
Trigger: CGACACGCGGTGATGTACCCATGCTCCGTGTGTCTG...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCTCCCTGCAGCTGAGGTaGCTAGGCTTGACACACGTA +
Preference number: 4 (lower is better)
Translates to: EHGYITACRHVQPHSCARSLQLR*LGLTHV
Trigger: TACGTGTGTCAAGCCTAGCCACCTCAGCTGCAGGGA...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCGTCTGGGCTGCAGCCTaGCCCTGTTTGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAVWAAA*PCLQAA
Trigger: CGCTGCCTGCAAACAGGGCCAGGCTGCAGCCCAGAC...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS-3UTR TCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACAGCAGCTGCCACCGGTaGCGTCCTGGAGAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHSSCHR*RPGEES
Trigger: GCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCT...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGTGTGGTTACGGCCGTaGACCATGACCCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPVWLRP*TMTLMP
Trigger: CGGCATCAGGGTCATGGTTCACGGCCGTAACCACAC...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGTGTGGTTACGGCCGTaGACCATGACCCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQVWLRP*TMTLMP
Trigger: CGGCATCAGGGTCATGGTTCACGGCCGTAACCACAC...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGTCCCTGGCCGGACGCTaGAGCTGTGGTGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALSLAGR*SCGAPG
Trigger: TCCTGGGGCACCACAGCTTCAGCGTCCGGCCAGGGA...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCGTCCTCTCGGATGCTaGTGGTGGCCTCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLRPLGC*WWPPSL
Trigger: CAGGGACGGAGGCCACCATCAGCATCCGAGAGGACG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTGACCCGCAGAGTCCATCCAGCTaGCTTGGCGGAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VKAVAARAVAQSEPHSDPQSPSS*LGGRPP
Trigger: AGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTG...CGGGTCAGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCCTGGTAGACGATGTTaGTTTTGGCCAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCPGRRC*FWPGCS
Trigger: GGAGCAGCCTGGCCAAAATCAACATCGTCTACCAGG...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGCCACTGAGCGGTAGTTaGGCTCCTGGTAGACGATGT +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWPLSGS*APGRRC
Trigger: ACATCGTCTACCAGGAGCTCAACTACCGCTCAGTGG...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCCGCCTAGCACCAGGGTaGGGGCAGAAGCATCGAGCA +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSARLAPG*GQKHRA
Trigger: TGCTCGATGCTTCTGCCCTCACCCTGGTGCTAGGCG...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGAGCCTCTGGCCTCCTaGCGGCTCTGGAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHEPLAS*RLWKEA
Trigger: TGCTTCCTTCCAGAGCCGGCAGGAGGCCAGAGGCTC...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGAGTGGAGAGCTTGAATaGAGACTCCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLSGELE*RLPAGP
Trigger: AGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACT...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAACAGGCTGCAGAGGCTaGCCATGGCCGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPTGCRG*PWPRAA
Trigger: AGCTGCTCTCGGCCATGGGCAGCCTCTGCAGCCTGT...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCCCCAAACCACAGGCTaGAGAGGCTGCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVPQTTG*RGCPWP
Trigger: CGGCCATGGGCAGCCTCTGCAGCCTGTGGTTTGGGG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCACACACGTACACAGGTaGATCAGACGTGTGGACATG +
Preference number: 4 (lower is better)
Translates to: PTPGSVGGLTRGADMPGATHVHR*IRRVDM
Trigger: CATGTCCACACGTCTGATGCACCTGTGTACGTGTGT...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCGAACAGGCACTAAGGTaGCACCAAGGTGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAEQALR*HQGAPG
Trigger: GCCGGGGGCACCTTGGTGCCACCTTAGTGCCTGTTC...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGCCCTGGGACGGTTCTaGTGCAATAGACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQALGRF*CNRQAA
Trigger: GGCTGCCTGTCTATTGCACCAGAACCGTCCCAGGGC...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGACTGGTGAATCCACATaGTCCTCCCCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWTGEST*SSPSSG
Trigger: CCCAGAAGAGGGGGAGGACCATGTGGATTCACCAGT...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGAGCTCTGAAGCAGGATaGAGCCTCTGGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQSSEAG*SLWPPA
Trigger: GGCAGGAGGCCAGAGGCTCCATCCTGCTTCAGAGCT...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGGTGCCCCTCCTTaGGTGGTGGTGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLPGAPP*VVVVVL
Trigger: CAGCACCACCACCACCACCCAAGGAGGGGCACCAGG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCGGACTCGGCCGACGTaGGTTCCCGTCACACAGGGT +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVRTRPT*VPVTQG
Trigger: ACCCTGTGTGACGGGAACCCACGTCGGCCGAGTCCG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCTCCAGCAGCTCCAGATaGCGGAGGACCGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLSSSSR*RRTGLG
Trigger: GCCGAGTCCGGTCCTCCGCCATCTGGAGCTGCTGGA...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGTCCAGCAGCTCCAGATaGCGGAGGACCGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVSSSSR*RRTGLG
Trigger: GCCGAGTCCGGTCCTCCGCCATCTGGAGCTGCTGGA...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GGTGGAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCTCCAGCAGCTCCAGATaGCGGAGGACCGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: GGVNSFISEQPKCVRGACSSSSR*RRTGLG
Trigger: GCCGAGTCCGGTCCTCCGCCATCTGGAGCTGCTGGA...GCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCCGCGGGCAGCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGAAGTGGTACCAGTCCTaGACAGCCGCCACGCCTGAC +
Preference number: 4 (lower is better)
Translates to: CRGQQGQDIHIVEVVPVLKWYQS*TAATPD
Trigger: GTCAGGCGTGGCGGCTGTCCAGGACTGGTACCACTT...CAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGCTGCCCGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTAAGTGGTACCAGTCCTaGACAGCCGCCACGCCTGAC +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPKWYQS*TAATPD
Trigger: GTCAGGCGTGGCGGCTGTCCAGGACTGGTACCACTT...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCAGGAGAGGACGAAGTaGCCGTCCTGGCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVQERTK*PSWLPW
Trigger: CCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACAGCAGCTGCCGTAGGTaGGGTGGTGGAAGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHSSCRR*GGGRSG
Trigger: TCCGGACCTTCCACCACCCCACCTACGGCAGCTGCT...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACTGGCGGAAGGCCACCTaGAGGTCCCAGTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHWRKAT*RSQWRA
Trigger: AGCTCTCCACTGGGACCTCCAGGTGGCCTTCCGCCA...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCCGCGGGCAGCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGTCCATCCAGCTGACTTaGCGGAAGGCCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CRGQQGQDIHIVEVVPVLSIQLT*RKATWR
Trigger: CCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGA...CAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGCTGCCCGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCATCCCGCCAGAACCCCTaGAAGCATCACCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPSRQNP*KHHPWE
Trigger: CTCCCACGGGTGATGCTTCCAGGGGTTCTGGCGGGA...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACAGAGTCTCAAGGGGCTaGGGCCCAGCCCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHRVSRG*GPAQLS
Trigger: AGAGAGCTGGGCTGGGCCCCAGCCCCTTGAGACTCT...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCAGCCCTGGCAGGTCTaGTTCAGGTGTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLQPWQV*FRCPES
Trigger: AGACTCTGGACACCTGAACCAGACCTGCCAGGGCTG...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCCAAGTGTGTCCGTaGGGCCTGCCTTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPAQVCP*GLPCLL
Trigger: CAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTATTCCAAAGTTAACCTaGAAAACTAGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLIPKLT*KTSSAV
Trigger: CACAGCTGAGCTAGTTTTTCAGGTTAACTTTGGAAT...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR TCA 90 bp GCCTCGGTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTCATGTCCAGCACTGGTaGATCCACATGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ASVKAVAARAVAQSEPHSHVQHW*IHMVLP
Trigger: GGGGAGGACCATGTGGATTCACCAGTGCTGGACATG...AGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTACCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGTGTGGTTACGGCCGTaGACCATGACCCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPVWLRP*TMTLMP
Trigger: CGGCATCAGGGTCATGGTTCACGGCCGTAACCACAC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GCCTCGGTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTTCCCAGTGGAGAGCTTaGATGCAGACTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ASVKAVAARAVAQSEPHSSQWRA*MQTPCR
Trigger: CCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGA...AGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTACCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCACAGAGTCCATCCAGCTaGCTTGGCGGAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPQSPSS*LGGRPP
Trigger: AGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTG...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp AGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTGCAGGAGAGGACCACTGAGCGGTAGTTaGGCTCCTGGTAGACGATGT +
Preference number: 4 (lower is better)
Translates to: RSGTVGPGSPGHRNCRRGPLSGS*APGRRC
Trigger: ACATCGTCTACCAGGAGCTCAACTACCGCTCAGTGG...TCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCGCCTAGCACCAGGGTaGGGGCAGAAGCATCGAGCA +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVRLAPG*GQKHRA
Trigger: TGCTCGATGCTTCTGCCCTCACCCTGGTGCTAGGCG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GGTGGAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCGCCTAGCACCAGGGTaGGGGCAGAAGCATCGAGCA +
Preference number: 4 (lower is better)
Translates to: GGVNSFISEQPKCVRGACRLAPG*GQKHRA
Trigger: TGCTCGATGCTTCTGCCCTCACCCTGGTGCTAGGCG...GCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGGACTGGCCTCTGGCTTaGTGCTGGACGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALDWPLA*CWTPLR
Trigger: CCTCAGGGGCGTCCAGCATCAAGCCAGAGGCCAGTC...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCAGCTCTCTTCGGCTaGGACTCCCGCCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALPALFG*DSRQNP
Trigger: GGGGTTCTGGCGGGAGTCTCAGCCGAAGAGAGCTGG...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGGAGCCTCTGGCCTCCTaGCGGCTCTGGAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVEPLAS*RLWKEA
Trigger: TGCTTCCTTCCAGAGCCGGCAGGAGGCCAGAGGCTC...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCCGTCCATGCTTCGGTaGTCAGCCATTGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVPSMLR*SAIAGA
Trigger: TGCCCCCGCAATGGCTGAGCACCGAAGCATGGACGG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCATTCTCCCGTCCATaGTTCGGTGCTCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLPFSRP*FGAQPL
Trigger: CAATGGCTGAGCACCGAAGCATGGACGGGAGAATGG...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCGAGTGGCTCAGCCTCTaGAGACGGATCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLEWLSL*RRISRS
Trigger: GGACCGGGAGATCCGTCTGCAGAGGCTGAGCCACTC...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGGAGTGGCTCAGCCTCTaGAGACGGATCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVEWLSL*RRISRS
Trigger: GGACCGGGAGATCCGTCTGCAGAGGCTGAGCCACTC...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGCCGCGGGCAGCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGCCAGGCCATCGTAACTaGAGGAGAGGACGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CRGQQGQDIHIVEVVPVLPGHRN*RRGRSG
Trigger: GCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTGG...CAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGCTGCCCGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCAGGCCATCGTAACTaGAGGAGAGGACGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQPGHRN*RRGRSG
Trigger: GCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTGG...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCGACCGTGTAGCAGCTaGCGTAGGTGGGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVRPCSS*RRWGGG
Trigger: TCCACCACCCCACCTACGGCAGCTGCTACACGGTCG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCACGGCCGCGTGTGCTaGTTCCTGGGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALHGRVC*FLGCWS
Trigger: AGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTG...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAAACACACGTACACAGGTaGATCAGACGTGTGGACATG +
Preference number: 4 (lower is better)
Translates to: WVHHRVSARPAALVCTRETHVHR*IRRVDM
Trigger: CATGTCCACACGTCTGATGCACCTGTGTACGTGTGT...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTCATGTGGGGGTCCTGTaGTCACTGCACCATGACCAG +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPHVGVL*SLHHDQ
Trigger: CTGGTCATGGTGCAGTGACCACAGGACCCCCACATG...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCCGCGGGCAGCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGCATGTGGGGGTCCTGTaGTCACTGCACCATGACCAG +
Preference number: 4 (lower is better)
Translates to: CRGQQGQDIHIVEVVPVLHVGVL*SLHHDQ
Trigger: CTGGTCATGGTGCAGTGACCACAGGACCCCCACATG...CAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGCTGCCCGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp GAAGGCCACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCACTGGTGAATCCACATaGTCCTCCCCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EGHLEVPVESLNADSLQGTGEST*SSPSSG
Trigger: CCCAGAAGAGGGGGAGGACCATGTGGATTCACCAGT...GCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTGGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGGCAGGATGGAGCCTCTaGCCTCCTGCCGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALAGWSL*PPAGSG
Trigger: TCCAGAGCCGGCAGGAGGCCAGAGGCTCCATCCTGC...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGAGTCAATGTTCTCCCTaGCAAACTCGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHASQCSP*QTRPAA
Trigger: AGCTGCTGGACGAGTTTGCCAGGGAGAACATTGACT...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCAAGTGGTACCAGTCCTaGACAGCCGCCACGCCTGAC +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAKWYQS*TAATPD
Trigger: GTCAGGCGTGGCGGCTGTCCAGGACTGGTACCACTT...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGAGCAGCTGCCGTAGGTaGGGTGGTGGAAGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVSSCRR*GGGRSG
Trigger: TCCGGACCTTCCACCACCCCACCTACGGCAGCTGCT...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCAGGCAGGCCTGCCTaGTGTAGGAGGTGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQPGRPA*CRRCCV
Trigger: TACACAACACCTCCTACACCAGGCAGGCCTGCCTGG...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTCCAGGCAGGCCTGCCTaGTGTAGGAGGTGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPPGRPA*CRRCCV
Trigger: TACACAACACCTCCTACACCAGGCAGGCCTGCCTGG...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCTGGCGGAAGGCCACCTaGAGGTCCCAGTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLWRKAT*RSQWRA
Trigger: AGCTCTCCACTGGGACCTCCAGGTGGCCTTCCGCCA...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGTCCCGCCAGAACCCCTaGAAGCATCACCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVSRQNP*KHHPWE
Trigger: CTCCCACGGGTGATGCTTCCAGGGGTTCTGGCGGGA...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGGAGATCGCACAGCCCTaGCAGGTCTGGTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQEIAQP*QVWFRC
Trigger: ACACCTGAACCAGACCTGCCAGGGCTGTGCGATCTC...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACCCCAGGCAGTGTAGGTaGTTTGACCAGAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHPRQCR*FDQRRR
Trigger: TCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGG...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCAGCGTTGTGCTGAGTaGGTCTGTGCTGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQQRCAE*VCAAIP
Trigger: AGGGATGGCAGCACAGACCCACTCAGCACAACGCTG...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS-3UTR TCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCCATGTCCAGCACTGGTaGATCCACATGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAHVQHW*IHMVLP
Trigger: GGGGAGGACCATGTGGATTCACCAGTGCTGGACATG...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTGACCCGCCTGGTAGACGATGTTaGTTTTGGCCAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VKAVAARAVAQSEPHSDPPGRRC*FWPGCS
Trigger: GGAGCAGCCTGGCCAAAATCAACATCGTCTACCAGG...CGGGTCAGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR TCA 90 bp TGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCTGGTAGACGATGTTaGTTTTGGCCAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CRHRHTEHGYITACRHVQPGRRC*FWPGCS
Trigger: GGAGCAGCCTGGCCAAAATCAACATCGTCTACCAGG...CTGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCAGGCAGCGTTGTGCTaGGTGGGTCTGTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVQAALC*VGLCCH
Trigger: ATGGCAGCACAGACCCACTCAGCACAACGCTGCCTG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS-3UTR GCA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGAAGGTGCGTGTGGGCTaGCTTCTAGGTTCCCTCATA +
Preference number: 4 (lower is better)
Translates to: FQSSPSVSVGPALPSASLKVRVG*LLGSLI
Trigger: TATGAGGGAACCTAGAAGGCAGCCCACACGCACCTT...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR GCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTGGAGAGGAAAGCCATaGTGGAGTCACCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAWRGKP*WSHPGL
Trigger: CAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCA...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCATGGAGAGGAAAGCCATaGTGGAGTCACCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGPGYPHSGSGTSPGQPPWRGKP*WSHPGL
Trigger: CAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCA...TGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCGTCCATGCTTCGGTaGTCAGCCATTGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALPSMLR*SAIAGA
Trigger: TGCCCCCGCAATGGCTGAGCACCGAAGCATGGACGG...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTGACCCGCCATTCTCCCGTCCATaGTTCGGTGCTCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: VKAVAARAVAQSEPHSDPPFSRP*FGAQPL
Trigger: CAATGGCTGAGCACCGAAGCATGGACGGGAGAATGG...CGGGTCAGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR GCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCACCAGGCCATCGTAACTaGAGGAGAGGACGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPPGHRN*RRGRSG
Trigger: GCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTGG...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACTGCTGCTGCCACAGCTaGAAGGACCAGGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHCCCHS*KDQAKR
Trigger: TCTCTTGGCCTGGTCCTTGCAGCTGTGGCAGCAGCA...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCGCTGATTTCCTTGAGTaGCAGATGGGGCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSAADFLE*QMGLGC
Trigger: GCACCCCAGCCCCATCTGGCACTCAAGGAAATCAGC...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325425.12
CDS-3UTR GCA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGCCTGGTGGCTTCATCTaGGATAAGACCTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLPGGFI*DKTFIC
Trigger: GCAGATGAAGGTCTTATCGCAGATGAAGCCACCAGG...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGGCACTGCCCTGGAGATaGCAGGCGCCTGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALALPWR*QAPGIC
Trigger: ACAGATGCCAGGCGCCTGCCATCTCCAGGGCAGTGC...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACCATGTGGGGGTCCTGTaGTCACTGCACCATGACCAG +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHHVGVL*SLHHDQ
Trigger: CTGGTCATGGTGCAGTGACCACAGGACCCCCACATG...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CAGGCCATCGTAACTGCAGGAGAGGACGAAGTGGCCGTCCTGGCTCCCGTGGCTAGTCAATGTTCTCCCTaGCAAACTCGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QAIVTAGEDEVAVLAPVASQCSP*QTRPAA
Trigger: AGCTGCTGGACGAGTTTGCCAGGGAGAACATTGACT...AGCCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCACCAGGCAGGCCTGCCTaGTGTAGGAGGTGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPPGRPA*CRRCCV
Trigger: TACACAACACCTCCTACACCAGGCAGGCCTGCCTGG...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCACCATCAGCTGCTaGAAGCAGGACACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSASTISC*KQDTRQ
Trigger: CTGCCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGA...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCATCTGACTGGCCTCTaGCTTGATGCTGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLHLTGL*LDAGRP
Trigger: GGGGCGTCCAGCATCAAGCCAGAGGCCAGTCAGATG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGTGGAAGCATCACCCGTaGGAGATGAGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALWKHHP*EMRPAG
Trigger: CCCAGCGGGCCTCATCTCCCACGGGTGATGCTTCCA...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACCAGCCCTGGCAGGTCTaGTTCAGGTGTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHQPWQV*FRCPES
Trigger: AGACTCTGGACACCTGAACCAGACCTGCCAGGGCTG...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGAGATCGCACAGCCCTaGCAGGTCTGGTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHEIAQP*QVWFRC
Trigger: ACACCTGAACCAGACCTGCCAGGGCTGTGCGATCTC...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGGCCCAAGTGTGTCCGTaGGGCCTGCCTTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALAQVCP*GLPCLL
Trigger: CAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGC...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGAGTGCCAGATGGGGCTaGGGTGCCTCTCCAAGCTCG +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALSARWG*GASPSS
Trigger: CGAGCTTGGAGAGGCACCCCAGCCCCATCTGGCACT...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325425.12
CDS-3UTR TCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCATGTCCAGCACTGGTaGATCCACATGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVHVQHW*IHMVLP
Trigger: GGGGAGGACCATGTGGATTCACCAGTGCTGGACATG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGTGGTGCAGAAGAAGGTaGGCAGCTCCCGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALWCRRR*AAPGTR
Trigger: CCTCGTTCCGGGAGCTGCTCACCTTCTTCTGCACCA...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGGTGTGGTTACGGCCGTaGACCATGACCCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALVWLRP*TMTLMP
Trigger: CGGCATCAGGGTCATGGTTCACGGCCGTAACCACAC...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGGTTACTCAACCTCTCTaGGCTGATTTCCTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWVTQPL*ADFLEC
Trigger: GCACTCAAGGAAATCAGCTCAGAGAGGTTGAGTAAC...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325425.12
CDS-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGGTCTCCACCATCAGCTaGTGGAAGCAGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVVSTIS*WKQDTR
Trigger: CCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGAGAC...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCAGTGGAGAGCTTGAATaGAGACTCCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSASGELE*RLPAGP
Trigger: AGGCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACT...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTATGCCTCCTCCCTGCTaGAATTCAGGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPMPPPC*NSGTAS
Trigger: TGATGCTGTGCCTGAATTCCAGCAGGGAGGAGGCAT...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338555.6
ENST00000379116.10
CDS-3UTR CCA 90 bp GCCTCGGTAAAAGCAGTCGCCGCCCGTGCTGTTGCACAGTCTGAACCCCACTCTATGCCTCCTCCCTGCTaGAATTCAGGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: ASVKAVAARAVAQSEPHSMPPPC*NSGTAS
Trigger: TGATGCTGTGCCTGAATTCCAGCAGGGAGGAGGCAT...AGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGGCGACTGCTTTTACCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CCA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTACTCTGAGTCAGCCCTaGGACGGTTCTGGTGCAATA +
Preference number: 4 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPTLSQP*DGSGAI
Trigger: TATTGCACCAGAACCGTCCCAGGGCTGACTCAGAGT...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CCA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACACTGGTGAATCCACATaGTCCTCCCCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WTCRHRHTEHGYITACRHTGEST*SSPSSG
Trigger: CCCAGAAGAGGGGGAGGACCATGTGGATTCACCAGT...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGTCCACCATCAGCTGCTaGAAGCAGGACACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVSTISC*KQDTRQ
Trigger: CTGCCTGGTGTCCTGCTTCCAGCAGCTGATGGTGGA...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGTCCATCCAGCTGACTTaGCGGAAGGCCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ESTALFQSSPSVSVGPALSIQLT*RKATWR
Trigger: CCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGA...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCCTGTTCACCTAGCGTaGCCAGAGTCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVPVHLA*PESIQL
Trigger: CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGTTCACCTAGCGTaGCCAGAGTCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLPVHLA*PESIQL
Trigger: CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCAGCCCTGGCAGGTCTaGTTCAGGTGTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVQPWQV*FRCPES
Trigger: AGACTCTGGACACCTGAACCAGACCTGCCAGGGCTG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCAGACACACGGAGCATaGGTACATCACCGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLQTHGA*VHHRVS
Trigger: CGACACGCGGTGATGTACCCATGCTCCGTGTGTCTG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCAGCTGAGGTaGCTAGGCTTGACACACGTA +
Preference number: 4 (lower is better)
Translates to: ALFQSSPSVSVGPALPSASLQLR*LGLTHV
Trigger: TACGTGTGTCAAGCCTAGCCACCTCAGCTGCAGGGA...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR TCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCACTGAGCGGTAGTTaGGCTCCTGGTAGACGATGT +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLPLSGS*APGRRC
Trigger: ACATCGTCTACCAGGAGCTCAACTACCGCTCAGTGG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCCATTCTCCCGTCCATaGTTCGGTGCTCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVPFSRP*FGAQPL
Trigger: CAATGGCTGAGCACCGAAGCATGGACGGGAGAATGG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCACAGCACTGCCCTCATaGCTCCTCCCTGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLTALPS*LLPAGI
Trigger: AATTCCAGCAGGGAGGAGGCATGAGGGCAGTGCTGT...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379116.10
CDS-3UTR CCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCTCCCTGCAGCTGAGGTaGCTAGGCTTGACACACGTA +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLSLQLR*LGLTHV
Trigger: TACGTGTGTCAAGCCTAGCCACCTCAGCTGCAGGGA...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CCA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAAGTCAATGTTCTCCCTaGCAAACTCGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPSQCSP*QTRPAA
Trigger: AGCTGCTGGACGAGTTTGCCAGGGAGAACATTGACT...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR GCA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCACACACGTACACAGGTaGATCAGACGTGTGGACATG +
Preference number: 4 (lower is better)
Translates to: FISEQPKCVRGACLAFCLTHVHR*IRRVDM
Trigger: CATGTCCACACGTCTGATGCACCTGTGTACGTGTGT...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCGCCCCGGGCCTCCTaGAGACCCACCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLPPRAS*RPTPGS
Trigger: ACTGCCTGGGGTGGGTCTCAAGGAGGCCCGGGGCGG...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCACCGCCCCGGGCCTCCTaGAGACCCACCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPPPRAS*RPTPGS
Trigger: ACTGCCTGGGGTGGGTCTCAAGGAGGCCCGGGGCGG...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS GCA 90 bp AGCAGCTCCCGGAACGAGGCGGGCAGCTCCACCAGCCCCTCCTGGTaGCCCTCCTTGGGTGGTGGTGGTGGTGCTGATGGTGGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: SSSRNEAGSSTSPSW*PSLGGGGGADGGPG
Trigger: GCCGGGGCCACCATCAGCACCACCACCACCACCCAAGGAGGGGCACCAGGAGGGGCTGGTGGAGCTGCCCGCCTCGTTCCGGGAGCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
ENST00000470022.1
CDS-3UTR CAA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAGTGGGAGTGTGGAGCTaGGGGTCTGGCCGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPVGVWS*GSGRCP
Trigger: GGGACACCGGCCAGACCCCAAGCTCCACACTCCCAC...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CAA 90 bp CGGCGGTGCAGTGGCCGTAGGGGCTCCCGAGCCGGTGCACCTCGTCCTCTCGGATCCTGGTGCCCCTCCTaGGGTGGTGGTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: RRCSGRRGSRAGAPRPLGSWCPS*GGGGGA
Trigger: AGCACCACCACCACCACCCAAGGAGGGGCACCAGGA...TCCGAGAGGACGAGGTGCACCGGCTCGGGAGCCCCTACGGCCACTGCACCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS TCA 90 bp GGCGGAGGACCGGACTCGGCCGACGTGGGTTCCCGTCACACAGGGTaGCCAGCGGGAGCAGCTTGCGCTCCGAGTGCACAGAGACGGCCA +
Preference number: 5 (lower is better)
Translates to: GGGPDSADVGSRHTG*PAGAACAPSAQRRP
Trigger: TGGCCGTCTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGTCACCCTGTGTGACGGGAACCCACGTCGGCCGAGTCCGGTCCTCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp CCGCCAGAACCCCTGGAAGCATCACCCGTGGGAGATGAGGCCCGCTaGGCTCCGGGTCATCTGACGTGCCGCCTGCAGGCGGGGGCATCT +
Preference number: 5 (lower is better)
Translates to: PPEPLEASPVGDEAR*APGHLTCRLQAGAS
Trigger: AGATGCCCCCGCCTGCAGGCGGCACGTCAGATGACCCGGAGCCCAGCGGGCCTCATCTCCCACGGGTGATGCTTCCAGGGGTTCTGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCCCCCAGGACGTCGTCTaGAGGCGGTTCCCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAPQDVV*RRFPRE
Trigger: CTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGGG...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAACCAGCGGGAGCAGCTaGCGCTCCGAGTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPTSGSS*RSECTE
Trigger: CTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGT...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGCCGCCCCGGGCCTCCTaGAGACCCACCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAPPRAS*RPTPGS
Trigger: ACTGCCTGGGGTGGGTCTCAAGGAGGCCCGGGGCGG...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGTCCATCCAGCTGACTaGGCGGAAGGCCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: LTRGADMPGACLPTAACAVHPAD*AEGHLE
Trigger: CTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGAC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGCCGCCCCGGGCCTCCTaGAGACCCACCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWPPRAS*RPTPGS
Trigger: ACTGCCTGGGGTGGGTCTCAAGGAGGCCCGGGGCGG...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp CCAGGCAGAGCCCCCTCGGCCCCGGGCATCAACTGCACTGTCCAGTaGAGCCTCCGCAGAACAGGCACTAAGGTGGCACCAAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: PGRAPSAPGINCTVQ*SLRRTGTKVAPRCP
Trigger: GGGGCACCTTGGTGCCACCTTAGTGCCTGTTCTGCGGAGGCTCCACTGGACAGTGCAGTTGATGCCCGGGGCCGAGGGGGCTCTGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CAA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTTCGGTGCTCAGCCATaGCGGGGGCAGCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAFGAQP*RGQLAA
Trigger: AGCTGCCAGCTGCCCCCGCAATGGCTGAGCACCGAA...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGTCCTGGTGCCCCTCCTaGGGTGGTGGTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: HGYITACRHVQPHSCARGSWCPS*GGGGGA
Trigger: AGCACCACCACCACCACCCAAGGAGGGGCACCAGGA...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCTCCTGGTGCCCCTCCTaGGGTGGTGGTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: PTPGSVGGLTRGADMPGASWCPS*GGGGGA
Trigger: AGCACCACCACCACCACCCAAGGAGGGGCACCAGGA...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCGTCCATCCAGCTGACTaGGCGGAAGGCCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPVHPAD*AEGHLE
Trigger: CTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGAC...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CTGGCCCACCCTGGGCCGCTGGGGAGCCTGCTGCTGCCACAGCTGCAAGGACCAGGCAGTGTAGGTGGTTaGACCAGAGGCGCCGACATG +
Preference number: 5 (lower is better)
Translates to: LAHPGPLGSLLLPQLQGPGSVGG*TRGADM
Trigger: CATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC...TGGTCCTTGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTAACGAGGGAGCGGTGTaGTCTTCTGTGACAGCACTG +
Preference number: 5 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLNEGAV*SSVTAL
Trigger: CAGTGCTGTCACAGAAGACAACACCGCTCCCTCGTT...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp AGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGTTCGGTGCTCAGCCATaGCGGGGGCAGCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: SMGTSPRVGTSSRTRVHAFGAQP*RGQLAA
Trigger: AGCTGCCAGCTGCCCCCGCAATGGCTGAGCACCGAA...CGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCTTCGGTGCTCAGCCATaGCGGGGGCAGCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: EHGYITACRHVQPHSCARFGAQP*RGQLAA
Trigger: AGCTGCCAGCTGCCCCCGCAATGGCTGAGCACCGAA...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCTCCTGGTGCCCCTCCTaGGGTGGTGGTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: EHGYITACRHVQPHSCARSWCPS*GGGGGA
Trigger: AGCACCACCACCACCACCCAAGGAGGGGCACCAGGA...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp GAAGGCCACCTGGAGGTCCCAGTGGAGAGCTTGAATGCAGACTCCCTGCAGGGCCCCCAGGACGTCGTCTaGAGGCGGTTCCCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: EGHLEVPVESLNADSLQGPQDVV*RRFPRE
Trigger: CTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGGG...GCCCTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTGGCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CAA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCCCAGGACGTCGTCTaGAGGCGGTTCCCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: FQSSPSVSVGPALPSASLPQDVV*RRFPRE
Trigger: CTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGGG...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAAACCAGCGGGAGCAGCTaGCGCTCCGAGTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: WVHHRVSARPAALVCTRETSGSS*RSECTE
Trigger: CTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGT...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCACCAGCGGGAGCAGCTaGCGCTCCGAGTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: EHGYITACRHVQPHSCARTSGSS*RSECTE
Trigger: CTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGT...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTAGGGCGGCTCTGCCTTaGCTGAGGTTGACGTTGTAC +
Preference number: 5 (lower is better)
Translates to: LTRGADMPGACLPTAACARAALP*LRLTLY
Trigger: GTACAACGTCAACCTCAGCAAAGGCAGAGCCGCCCT...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp TTGACCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGTCCCAGTGGAGAGCTaGAATGCAGACTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LTRGADMPGACLPTAACAVPVES*NADSLQ
Trigger: CTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGAC...AGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS TCA 90 bp GCCTCTGGCCTCCTGCCGGCTCTGGAAGGAAGCAGCTGCCACCGGTaGCGTCCTGGAGAGGAAAGCCATGCTGGAGTCACCCAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: ASGLLPALEGSSCHR*RPGEESHAGVTQAC
Trigger: ACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGAGGCCAGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS TCA 90 bp CTGGCCTCCTGCCTGCCGGCTCTGGAAGGAAGCAGCTGCCACCGGTaGCGTCCTGGAGAGGAAAGCCATGCTGGAGTCACCCAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: LASCLPALEGSSCHR*RPGEESHAGVTQAC
Trigger: ACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGCAGGAGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470022.1
CDS CCA 90 bp TCAACTGCACTGTCCAGTGGAGCCTCCGCAGAACAGGCACTAAGGTaGCACCAAGGTGCCCCCGGCTGCTGGCCTGGGTGGGTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: STALSSGASAEQALR*HQGAPGCWPGWVLR
Trigger: CCTCAGCACCCACCCAGGCCAGCAGCCGGGGGCACCTTGGTGCCACCTTAGTGCCTGTTCTGCGGAGGCTCCACTGGACAGTGCAGTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 90 bp CCTCCTGCCGGCTCTGGAAGGAAGCAGCTGCCACCGGTGACGTCCTaGAGAGGAAAGCCATGCTGGAGTCACCCAGGCCTGTCCCACACC +
Preference number: 5 (lower is better)
Translates to: PPAGSGRKQLPPVTS*RGKPCWSHPGLSHT
Trigger: GGTGTGGGACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp GTGCTGTTGCACAGTCTGAACCCCACTCTGACCCGGCTGCCCGAGTaGCTCAGCCTCTGCAGACGGATCTCCCGGTCCAGGTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: VLLHSLNPTLTRLPE*LSLCRRISRSRWKG
Trigger: CCCCTTCCACCTGGACCGGGAGATCCGTCTGCAGAGGCTGAGCCACTCGGGCAGCCGGGTCAGAGTGGGGTTCAGACTGTGCAACAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp CAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTaGTTCAGGTGTCCAGAGTCTCAAGGGGCTGGGGCCCAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: QLQGPGQEIAQPWQV*FRCPESQGAGAQPS
Trigger: GCTGGGCTGGGCCCCAGCCCCTTGAGACTCTGGACACCTGAACCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp TCTGGGCTGCAGCCTGGCCCTGTTTGCAGGCAGCGTTGTGCTGAGTaGGTCTGTGCTGCCATCCCTTCAGGTGGCAGGGCCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: SGLQPGPVCRQRCAE*VCAAIPSGGRASGE
Trigger: CTCCCCAGAGGCCCTGCCACCTGAAGGGATGGCAGCACAGACCCACTCAGCACAACGCTGCCTGCAAACAGGGCCAGGCTGCAGCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS-3UTR CAA 90 bp CTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTGGCAGGTCTGGTTCGGTGCTCAGCCATaGCGGGGGCAGCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LPQLQGPGQEIAQPWQVWFGAQP*RGQLAA
Trigger: AGCTGCCAGCTGCCCCCGCAATGGCTGAGCACCGAA...CCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CAGGCCATCGTAACTGCAGGAGAGGACGAAGTGGCCGTCCTGGCTCCCGTGGCTTTCGGTGCTCAGCCATaGCGGGGGCAGCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: QAIVTAGEDEVAVLAPVAFGAQP*RGQLAA
Trigger: AGCTGCCAGCTGCCCCCGCAATGGCTGAGCACCGAA...AGCCACGGGAGCCAGGACGGCCACTTCGTCCTCTCCTGCAGTTACGATGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CAA 90 bp GGCTCTGATGCGGCAGCCCCTGTTCACCTAGCGTGGCCAGAGTCCATCCAGCTGACCAGCGGGAGCAGCTaGCGCTCCGAGTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: GSDAAAPVHLAWPESIQLTSGSS*RSECTE
Trigger: CTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGT...CAGCTGGATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CAA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGTCCATCCAGCTGACTaGGCGGAAGGCCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: EHGYITACRHVQPHSCARVHPAD*AEGHLE
Trigger: CTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGAC...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CCCACCCCAGGCAGTGTAGGTGGTTTGACCAGAGGCGCCGACATGCCCGGTGCCGGCAGTGTAGGTGGTTaGACCAGAGGCGCCGACATG +
Preference number: 5 (lower is better)
Translates to: PTPGSVGGLTRGADMPGAGSVGG*TRGADM
Trigger: CATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC...GGCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGGGCAGTGTAGGTGGTTaGACCAGAGGCGCCGACATG +
Preference number: 5 (lower is better)
Translates to: HGYITACRHVQPHSCARGGSVGG*TRGADM
Trigger: CATGTCGGCGCCTCTGGTCAAACCACCTACACTGCC...CCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS TCA 90 bp GCCCCATTGACCGAGCATGGCTGTGAGCTCACCTCCTTGGGCCGCTaGGGTGGCCGGGCCACAGGTAACGAGGGAGCGGTGTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: APLTEHGCELTSLGR*GGRATGNEGAVLSS
Trigger: AGAAGACAACACCGCTCCCTCGTTACCTGTGGCCCGGCCACCTCAGCGGCCCAAGGAGGTGAGCTCACAGCCATGCTCGGTCAATGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS GCA 90 bp GGAAGGAAGCAGCTGCCACCGGTGACGTCCTGGAGAGGAAAGCCATaGTGGAGTCACCCAGGCCTGTCCCACACCCCTGTATCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: GRKQLPPVTSWRGKP*WSHPGLSHTPVSGQ
Trigger: CTGGCCCGATACAGGGGTGTGGGACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp TTCTGTGACAGCACTGCCCTGGAGATGGCAGGCGCCTGGCATCTGTaGGACCCCAGCCAGGACCTCCTATCCCAGAGCCCCGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FCDSTALEMAGAWHL*DPSQDLLSQSPVSS
Trigger: GGAGGAAACGGGGCTCTGGGATAGGAGGTCCTGGCTGGGGTCCCACAGATGCCAGGCGCCTGCCATCTCCAGGGCAGTGCTGTCACAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 90 bp CTGCTGCCACAGCTGCAAGGACCAGGCCAAGAGATCGCACAGCCCTaGCAGGTCTGGTTCAGGTGTCCAGAGTCTCAAGGGGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: LLPQLQGPGQEIAQP*QVWFRCPESQGAGA
Trigger: GGCCCCAGCCCCTTGAGACTCTGGACACCTGAACCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCTTGCAGCTGTGGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp GAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTCCTGCATCACCTCAGGCCTaGAGTCTGATGAGAAGCATT +
Preference number: 5 (lower is better)
Translates to: EAPTCPVPASPRPRVLLPASPQA*SLMRSI
Trigger: AATGCTTCTCATCAGACTCAAGGCCTGAGGTGATGC...AGGAAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338555.6
ENST00000379116.10
CDS-3UTR CAA 90 bp TTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCCATCCCTGGCTCCCTTaGGGCCCATGCCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: FRAAQVCPWGLPCLLPPCHPWLP*GPCLCS
Trigger: AGAGCAGAGGCATGGGCCCAAAGGGAGCCAGGGATG...GCAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS-3UTR CAA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCACCCCAGGACGTCGTCTaGAGGCGGTTCCCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPPQDVV*RRFPRE
Trigger: CTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGGG...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CCTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCGTCCATCCAGCTGACTaGGCGGAAGGCCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: PSVARVHPADLAEGHLEVVHPAD*AEGHLE
Trigger: CTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGAC...GACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS GCA 90 bp TCCCCCACTCAGGGTCACTCTGAGTCAGCCCTGGGACGGTTCTGGTaGAATAGACAGGCAGCCCAAGGTCGGGATTCCCGTGGGCATGGG +
Preference number: 5 (lower is better)
Translates to: SPTQGHSESALGRFW*NRQAAQGRDSRGHG
Trigger: CCCATGCCCACGGGAATCCCGACCTTGGGCTGCCTGTCTATTGCACCAGAACCGTCCCAGGGCTGACTCAGAGTGACCCTGAGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 90 bp GCGTCCCCCACTCAGGGTCACTCTGAGTCAGCCCTGGGACGGTTCTaGTGCAATAGACAGGCAGCCCAAGGTCGGGATTCCCGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: ASPTQGHSESALGRF*CNRQAAQGRDSRGH
Trigger: ATGCCCACGGGAATCCCGACCTTGGGCTGCCTGTCTATTGCACCAGAACCGTCCCAGGGCTGACTCAGAGTGACCCTGAGTGGGGGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 90 bp CCCTGGGGTGAGCGTCCCCCACTCAGGGTCACTCTGAGTCAGCCCTaGGACGGTTCTGGTGCAATAGACAGGCAGCCCAAGGTCGGGATT +
Preference number: 5 (lower is better)
Translates to: PWGERPPLRVTLSQP*DGSGAIDRQPKVGI
Trigger: AATCCCGACCTTGGGCTGCCTGTCTATTGCACCAGAACCGTCCCAGGGCTGACTCAGAGTGACCCTGAGTGGGGGACGCTCACCCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 90 bp AGGAAGCAGCTGCCACCGGTGACGTCCTGGAGAGGAAAGCCATGCTaGAGTCACCCAGGCCTGTCCCACACCCCTGTATCGGGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: RKQLPPVTSWRGKPC*SHPGLSHTPVSGQR
Trigger: TCTCTGGCCCGATACAGGGGTGTGGGACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CCAGAGGCGCCGACATGCCCGGTGCCTGCCTCCCCACGGCCGCGTGTGCTGCTTTTGCTGAGGTTGACGTaGTACAGGGAGTCAATGTTC +
Preference number: 5 (lower is better)
Translates to: PEAPTCPVPASPRPRVLLLLRLT*YRESMF
Trigger: GAACATTGACTCCCTGTACAACGTCAACCTCAGCAA...AAGCAGCACACGCGGCCGTGGGGAGGCAGGCACCGGGCATGTCGGCGCCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CGGCGGTGCAGTGGCCGTAGGGGCTCCCGAGCCGGTGCACCTCGTCCTCTCGGATTGCTGAGGTTGACGTaGTACAGGGAGTCAATGTTC +
Preference number: 5 (lower is better)
Translates to: RRCSGRRGSRAGAPRPLGLLRLT*YRESMF
Trigger: GAACATTGACTCCCTGTACAACGTCAACCTCAGCAA...TCCGAGAGGACGAGGTGCACCGGCTCGGGAGCCCCTACGGCCACTGCACCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CAA 90 bp ACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACCCCCCTGCCTTTGCTGAGGTaGACGTTGTACAGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: TSPRVGTSSRTRVHAGTPLPLLR*TLYRES
Trigger: TGACTCCCTGTACAACGTCAACCTCAGCAAAGGCAG...GGGGGTTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCAGGGCGGCTCTGCCTTaGCTGAGGTTGACGTTGTAC +
Preference number: 5 (lower is better)
Translates to: EHGYITACRHVQPHSCARRAALP*LRLTLY
Trigger: GTACAACGTCAACCTCAGCAAAGGCAGAGCCGCCCT...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAAGTCCCAGTGGAGAGCTaGAATGCAGACTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: WVHHRVSARPAALVCTREVPVES*NADSLQ
Trigger: CTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGAC...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp TGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCGGGAACTGAGGTGGCTAGGCTaGACACACGTACACAGGTGC +
Preference number: 5 (lower is better)
Translates to: WVHHRVSARPAALVCTRELRWLG*THVHRC
Trigger: GCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAG...TTCCCGCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp CCTCCTGCCGGCTCTGGAAGGAAGCAGCTGCCACCGGTGACGTCCTaGAGAGGAAAGCCATGCTGGAGTCACCCAGGCCTGTGTGAATCA +
Preference number: 5 (lower is better)
Translates to: PPAGSGRKQLPPVTS*RGKPCWSHPGLCES
Trigger: TGATTCACACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325425.12
CDS CCA 90 bp CCCGAGTTACTCAACCTCTCTGAGCTGATTTCCTTGAGTGCCAGATaGGGCTGGGGTGCCTCTCCAAGCTCGCGGCAGGGGGCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: PELLNLSELISLSAR*GWGASPSSRQGACC
Trigger: GCAGCAAGCCCCCTGCCGCGAGCTTGGAGAGGCACCCCAGCCCCATCTGGCACTCAAGGAAATCAGCTCAGAGAGGTTGAGTAACTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470022.1
CDS CCA 90 bp CTGCCTGCCGGCTCTGGAAGGAAGCAGCTGCCACCGGTGACGTCCTaGAGAGGAAAGCCATGCTGGAGTCACCCAGGCCTGTGTGAATCA +
Preference number: 5 (lower is better)
Translates to: LPAGSGRKQLPPVTS*RGKPCWSHPGLCES
Trigger: TGATTCACACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470022.1
CDS-3UTR CAA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCTGGTGCCCCTCCTaGGGTGGTGGTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: ALFQSSPSVSVGPALPSASWCPS*GGGGGA
Trigger: AGCACCACCACCACCACCCAAGGAGGGGCACCAGGA...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp TTACTCAACCTCTCTGAGCTGATTTCCTTGAGTGCCAGATGGGGCTaGGGTGCCTCTCCAAGCTCGCGGCAGGGGGCTTGCTGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: LLNLSELISLSARWG*GASPSSRQGACCRG
Trigger: TCCTCGGCAGCAAGCCCCCTGCCGCGAGCTTGGAGAGGCACCCCAGCCCCATCTGGCACTCAAGGAAATCAGCTCAGAGAGGTTGAGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470022.1
CDS-3UTR CAA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCCTGCCTTTGCTGAGGTaGACGTTGTACAGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: EHGYITACRHVQPHSCARLPLLR*TLYRES
Trigger: TGACTCCCTGTACAACGTCAACCTCAGCAAAGGCAG...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp AGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTGCAGGAGAGGAAGGGCGGCTCTGCCTTaGCTGAGGTTGACGTTGTAC +
Preference number: 5 (lower is better)
Translates to: RSGTVGPGSPGHRNCRRGRAALP*LRLTLY
Trigger: GTACAACGTCAACCTCAGCAAAGGCAGAGCCGCCCT...TCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CAA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGGTCCCAGTGGAGAGCTaGAATGCAGACTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: FQSSPSVSVGPALPSASLVPVES*NADSLQ
Trigger: CTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGAC...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp AGGAAGCAGCTGCCACCGGTGACGTCCTGGAGAGGAAAGCCATGCTaGAGTCACCCAGGCCTGTGTGAATCACAGCTTCGTCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: RKQLPPVTSWRGKPC*SHPGLCESQLRHWL
Trigger: CAGCCAGTGACGAAGCTGTGATTCACACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000470022.1
CDS-3UTR CAA 90 bp GAGTCAACAGCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGACCAGCGGGAGCAGCTaGCGCTCCGAGTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: ESTALFQSSPSVSVGPALTSGSS*RSECTE
Trigger: CTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGT...CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp ATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTAGGGCGGCTCTGCCTTaGCTGAGGTTGACGTTGTAC +
Preference number: 5 (lower is better)
Translates to: ISEQPKCVRGACLAFCLPRAALP*LRLTLY
Trigger: GTACAACGTCAACCTCAGCAAAGGCAGAGCCGCCCT...AGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGGTCCATCCAGCTGACTaGGCGGAAGGCCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVVHPAD*AEGHLE
Trigger: CTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGAC...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CTAGCGTGGCCAGAGTCCATCCAGCTGACTTGGCGGAAGGCCACCTGGAGGTCCGCATCACCTCAGGCCTaGAGTCTGATGAGAAGCATT +
Preference number: 5 (lower is better)
Translates to: LAWPESIQLTWRKATWRSASPQA*SLMRSI
Trigger: AATGCTTCTCATCAGACTCAAGGCCTGAGGTGATGC...GGACCTCCAGGTGGCCTTCCGCCAAGTCAGCTGGATGGACTCTGGCCACGCTAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CAA 90 bp GAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCCGCACTCGTGTGCACGCTTGCTGAGGTTGACGTaGTACAGGGAGTCAATGTTC +
Preference number: 5 (lower is better)
Translates to: EHGYITACRHVQPHSCARLLRLT*YRESMF
Trigger: GAACATTGACTCCCTGTACAACGTCAACCTCAGCAA...GCGTGCACACGAGTGCGGCTGGACGTGCCGACACGCGGTGATGTACCCATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp AGGTCCGGAACTGTCGGGCCTGGCAGTCCAGGCCATCGTAACTGCAGGAGAGGACTGCCTTTGCTGAGGTaGACGTTGTACAGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: RSGTVGPGSPGHRNCRRGLPLLR*TLYRES
Trigger: TGACTCCCTGTACAACGTCAACCTCAGCAAAGGCAG...TCCTCTCCTGCAGTTACGATGGCCTGGACTGCCAGGCCCGACAGTTCCGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CAA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGCTGCCTTTGCTGAGGTaGACGTTGTACAGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: FQSSPSVSVGPALPSASLLPLLR*TLYRES
Trigger: TGACTCCCTGTACAACGTCAACCTCAGCAAAGGCAG...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCCAGTGGAGAGCTaGAATGCAGACTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: WTCRHRHTEHGYITACRHVPVES*NADSLQ
Trigger: CTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGAC...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp GCAGGGCCAGGATATCCACATAGTGGAAGTGGTACCAGTCCTGGACAGCCGCCAGTCCCAGTGGAGAGCTaGAATGCAGACTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AGPGYPHSGSGTSPGQPPVPVES*NADSLQ
Trigger: CTGCAGGGAGTCTGCATTCAAGCTCTCCACTGGGAC...TGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379101.8
CDS-3UTR CAA 90 bp TGGACATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACCTGAGGTGGCTAGGCTaGACACACGTACACAGGTGC +
Preference number: 5 (lower is better)
Translates to: WTCRHRHTEHGYITACRHLRWLG*THVHRC
Trigger: GCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAG...GTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCATGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCAGGGCGGCTCTGCCTTaGCTGAGGTTGACGTTGTAC +
Preference number: 5 (lower is better)
Translates to: FISEQPKCVRGACLAFCLRAALP*LRLTLY
Trigger: GTACAACGTCAACCTCAGCAAAGGCAGAGCCGCCCT...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp CTGCAGCTGAGGTGGCTAGGCTTGACACACGTACACAGGTGCATCAGACGTGTGCTGAGGTGGCTAGGCTaGACACACGTACACAGGTGC +
Preference number: 5 (lower is better)
Translates to: LQLRWLGLTHVHRCIRRVLRWLG*THVHRC
Trigger: GCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAG...CACACGTCTGATGCACCTGTGTACGTGTGTCAAGCCTAGCCACCTCAGCTGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS GCA 90 bp AGCGGTGTTGTCTTCTGTGACAGCACTGCCCTCATGCCTCCTCCCTaGTGGAATTCAGGCACAGCATCAGCATCACCTCAGGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: SGVVFCDSTALMPPP*WNSGTASASPQALS
Trigger: ACTCAAGGCCTGAGGTGATGCTGATGCTGTGCCTGAATTCCAGCAGGGAGGAGGCATGAGGGCAGTGCTGTCACAGAAGACAACACCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379101.8
ENST00000379116.10
CDS CCA 90 bp GGTGTTGTCTTCTGTGACAGCACTGCCCTCATGCCTCCTCCCTGCTaGAATTCAGGCACAGCATCAGCATCACCTCAGGCCTTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: GVVFCDSTALMPPPC*NSGTASASPQALSL
Trigger: CAGACTCAAGGCCTGAGGTGATGCTGATGCTGTGCCTGAATTCCAGCAGGGAGGAGGCATGAGGGCAGTGCTGTCACAGAAGACAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379101.8
ENST00000379116.10
CDS-3UTR CAA 90 bp TTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCCTGTTGCTGAGGTTGACGTaGTACAGGGAGTCAATGTTC +
Preference number: 5 (lower is better)
Translates to: FQSSPSVSVGPALPSASLLLRLT*YRESMF
Trigger: GAACATTGACTCCCTGTACAACGTCAACCTCAGCAA...CAGGGAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS CCA 90 bp CCATGCTGGAGTCACCCAGGCCTGTGTGAATCACAGCTTCGTCACTaGCTGTGTGGCCTTCCCGAGTTACTCAACCTCTCTGAGCTGATT +
Preference number: 5 (lower is better)
Translates to: PCWSHPGLCESQLRH*LCGLPELLNLSELI
Trigger: AATCAGCTCAGAGAGGTTGAGTAACTCGGGAAGGCCACACAGCCAGTGACGAAGCTGTGATTCACACAGGCCTGGGTGACTCCAGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000470022.1
CDS-3UTR CAA 90 bp ATGCAGACACAGACACACGGAGCATGGGTACATCACCGCGTGTCGGCACGTCCAGCATCACCTCAGGCCTaGAGTCTGATGAGAAGCATT +
Preference number: 5 (lower is better)
Translates to: MQTQTHGAWVHHRVSARPASPQA*SLMRSI
Trigger: AATGCTTCTCATCAGACTCAAGGCCTGAGGTGATGC...TGGACGTGCCGACACGCGGTGATGTACCCATGCTCCGTGTGTCTGTGTCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338555.6
ENST00000379116.10
CDS-3UTR CAA 90 bp TTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTCCTGCCTTTGCTGAGGTaGACGTTGTACAGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: FISEQPKCVRGACLAFCLLPLLR*TLYRES
Trigger: TGACTCCCTGTACAACGTCAACCTCAGCAAAGGCAG...GAGGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS-3UTR CAA 90 bp GCTTTATTTCAGAGCAGCCCAAGTGTGTCCGTGGGGCCTGCCTTGCCTTCTGCCTTGCTGAGGTTGACGTaGTACAGGGAGTCAATGTTC +
Preference number: 5 (lower is better)
Translates to: ALFQSSPSVSVGPALPSALLRLT*YRESMF
Trigger: GAACATTGACTCCCTGTACAACGTCAACCTCAGCAA...GGCAGAAGGCAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS TCA 90 bp CTGGATGGACCCCTGGTCTTAGCCATGGGCATTCCAAAGTTAACCTaGAAAACTAGCTCAGCTGTGATGGGAAGGGAGTCGGACGCACCT +
Preference number: 5 (lower is better)
Translates to: LDGPLVLAMGIPKLT*KTSSAVMGRESDAP
Trigger: AGGTGCGTCCGACTCCCTTCCCATCACAGCTGAGCTAGTTTTTCAGGTTAACTTTGGAATGCCCATGGCTAAGACCAGGGGTCCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS TCA 72 bp ACGCCCTGCGGAGCCGGCGGCCGCCTAGCACCAGGGTaGGGGCAGAAGCATCGAGCAGCAGCTCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: TPCGAGGRLAPG*GQKHRAAAPGA
Trigger: AGCTCCTGGAGCTGCTGCTCGATGCTTCTGCCCTCACCCTGGTGCTAGGCGGCCGCCGGCTCCGCAGGGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS CCA 72 bp CCCCTGGAAGCATCACCCGTGGGAGATGAGGCCCGCTaGGCTCCGGGTCATCTGACGTGCCGCCTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: PLEASPVGDEAR*APGHLTCRLQA
Trigger: CGCCTGCAGGCGGCACGTCAGATGACCCGGAGCCCAGCGGGCCTCATCTCCCACGGGTGATGCTTCCAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS CCA 72 bp GGCAGGGGGCTTGCTGCCGAGGAGACAGGGCACACATaGCCCGGGCGGCTACTTGGCAGGCGGGGACAAGGT +
Preference number: 6 (lower is better)
Translates to: GRGLAAEETGHT*PGRLLGRRGQG
Trigger: ACCTTGTCCCCGCCTGCCAAGTAGCCGCCCGGGCCATGTGTGCCCTGTCTCCTCGGCAGCAAGCCCCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470022.1
CDS CAA 90 bp GGCCGACGTGGGTTCCCGTCACACAGGGTGACCAGCGGGAGCAGCTaGCGCTCCGAGTGCACAGAGACGGCCATGAGGACCGGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: GRRGFPSHRVTSGSS*RSECTETAMRTGRC
Trigger: GCACCGCCCGGTCCTCATGGCCGTCTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGTCACCCTGTGTGACGGGAACCCACGTCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS TCA 72 bp CCGGACTCGGCCGACGTGGGTTCCCGTCACACAGGGTaGCCAGCGGGAGCAGCTTGCGCTCCGAGTGCACAG +
Preference number: 6 (lower is better)
Translates to: PDSADVGSRHTG*PAGAACAPSAQ
Trigger: CTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGTCACCCTGTGTGACGGGAACCCACGTCGGCCGAGTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS TCA 72 bp CCCGCCAGAACCCCTGGAAGCATCACCCGTGGGAGATaGGGCCCGCTGGGCTCCGGGTCATCTGACGTGCCG +
Preference number: 6 (lower is better)
Translates to: PARTPGSITRGR*GPLGSGSSDVP
Trigger: CGGCACGTCAGATGACCCGGAGCCCAGCGGGCCTCATCTCCCACGGGTGATGCTTCCAGGGGTTCTGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379116.10
ENST00000400928.7
CDS GCA 72 bp CACAGGGTGACCAGCGGGAGCAGCTTGCGCTCCGAGTaGACAGAGACGGCCATGAGGACCGGGCGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: HRVTSGSSLRSE*TETAMRTGRCQ
Trigger: CTGGCACCGCCCGGTCCTCATGGCCGTCTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGTCACCCTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS TCA 72 bp ACCGAGCATGGCTGTGAGCTCACCTCCTTGGGCCGCTaGGGTGGCCGGGCCACAGGTAACGAGGGAGCGGTG +
Preference number: 6 (lower is better)
Translates to: TEHGCELTSLGR*GGRATGNEGAV
Trigger: CACCGCTCCCTCGTTACCTGTGGCCCGGCCACCTCAGCGGCCCAAGGAGGTGAGCTCACAGCCATGCTCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CAA 72 bp CCGAGGAGACAGGGCACACATGGCCCGGGCGGCTACTaGGCAGGCGGGGACAAGGTCCTAGGTGCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: PRRQGTHGPGGY*AGGDKVLGACQ
Trigger: CTGGCAAGCACCTAGGACCTTGTCCCCGCCTGCCAAGTAGCCGCCCGGGCCATGTGTGCCCTGTCTCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470022.1
CDS CCA 72 bp CACAGTCTGAACCCCACTCTGACCCGGCTGCCCGAGTaGCTCAGCCTCTGCAGACGGATCTCCCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: HSLNPTLTRLPE*LSLCRRISRSR
Trigger: CCTGGACCGGGAGATCCGTCTGCAGAGGCTGAGCCACTCGGGCAGCCGGGTCAGAGTGGGGTTCAGACTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CAA 72 bp GGGTTCCCGTCACACAGGGTGACCAGCGGGAGCAGCTaGCGCTCCGAGTGCACAGAGACGGCCATGAGGACC +
Preference number: 6 (lower is better)
Translates to: GFPSHRVTSGSS*RSECTETAMRT
Trigger: GGTCCTCATGGCCGTCTCTGTGCACTCGGAGCGCAAGCTGCTCCCGCTGGTCACCCTGTGTGACGGGAACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CAA 90 bp GGCTTGCTGCCGAGGAGACAGGGCACACATGGCCCGGGCGGCTACTaGGCAGGCGGGGACAAGGTCCTAGGTGCTTGCCAGAGATTGTGG +
Preference number: 6 (lower is better)
Translates to: GLLPRRQGTHGPGGY*AGGDKVLGACQRLW
Trigger: CCACAATCTCTGGCAAGCACCTAGGACCTTGTCCCCGCCTGCCAAGTAGCCGCCCGGGCCATGTGTGCCCTGTCTCCTCGGCAGCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470022.1
CDS TCA 72 bp GGAGCAGCTTGCGCTCCGAGTGCACAGAGACGGCCATaGGGACCGGGCGGTGCCAGTGACGCTCAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: GAACAPSAQRRP*GPGGASDAQRG
Trigger: TCCTCTTTGAGCGTCACTGGCACCGCCCGGTCCTCATGGCCGTCTCTGTGCACTCGGAGCGCAAGCTGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CCA 72 bp ATGTTCTCCCTGGCAAACTCGTCCAGCAGCTCCAGATaGCGGAGGACCGGACTCGGCCGACGTGGGTTCCCG +
Preference number: 6 (lower is better)
Translates to: MFSLANSSSSSR*RRTGLGRRGFP
Trigger: CGGGAACCCACGTCGGCCGAGTCCGGTCCTCCGCCATCTGGAGCTGCTGGACGAGTTTGCCAGGGAGAACAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CCA 72 bp CAGCCTGGCCCTGTTTGCAGGCAGCGTTGTGCTGAGTaGGTCTGTGCTGCCATCCCTTCAGGTGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: QPGPVCRQRCAE*VCAAIPSGGRA
Trigger: GGCCCTGCCACCTGAAGGGATGGCAGCACAGACCCACTCAGCACAACGCTGCCTGCAAACAGGGCCAGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000379116.10
CDS TCA 72 bp CTCTGCTCTCTCCCAGGAAAGACGGCCAGGCCCCATTaGCCGAGCATGGCTGTGAGCTCACCTCCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: LCSLPGKTARPH*PSMAVSSPPWA
Trigger: GGCCCAAGGAGGTGAGCTCACAGCCATGCTCGGTCAATGGGGCCTGGCCGTCTTTCCTGGGAGAGAGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS TCA 72 bp CTCCTGCCGGCTCTGGAAGGAAGCAGCTGCCACCGGTaGCGTCCTGGAGAGGAAAGCCATGCTGGAGTCACC +
Preference number: 6 (lower is better)
Translates to: LLPALEGSSCHR*RPGEESHAGVT
Trigger: GGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS TCA 72 bp TGCCTGCCGGCTCTGGAAGGAAGCAGCTGCCACCGGTaGCGTCCTGGAGAGGAAAGCCATGCTGGAGTCACC +
Preference number: 6 (lower is better)
Translates to: CLPALEGSSCHR*RPGEESHAGVT
Trigger: GGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCTTCCAGAGCCGGCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470022.1
CDS CCA 72 bp TTCTGTGACAGCACTGCCCTGGAGATGGCAGGCGCCTaGCATCTGTGGGACCCCAGCCAGGACCTCCTATCC +
Preference number: 6 (lower is better)
Translates to: FCDSTALEMAGA*HLWDPSQDLLS
Trigger: GGATAGGAGGTCCTGGCTGGGGTCCCACAGATGCCAGGCGCCTGCCATCTCCAGGGCAGTGCTGTCACAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 72 bp GAGGGAGCGGTGTTGTCTTCTGTGACAGCACTGCCCTaGAGATGGCAGGCGCCTGGCATCTGTGGGACCCCA +
Preference number: 6 (lower is better)
Translates to: EGAVLSSVTALP*RWQAPGICGTP
Trigger: TGGGGTCCCACAGATGCCAGGCGCCTGCCATCTCCAGGGCAGTGCTGTCACAGAAGACAACACCGCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 72 bp TGGGGCGAACCCAGCTCCCGGCATGTGGGGGTCCTGTaGTCACTGCACCATGACCAGGTGAGCCTGAATGAG +
Preference number: 6 (lower is better)
Translates to: WGEPSSRHVGVL*SLHHDQVSLNE
Trigger: CTCATTCAGGCTCACCTGGTCATGGTGCAGTGACCACAGGACCCCCACATGCCGGGAGCTGGGTTCGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 72 bp CTGCCACCGGTGACGTCCTGGAGAGGAAAGCCATGCTaGAGTCACCCAGGCCTGTCCCACACCCCTGTATCG +
Preference number: 6 (lower is better)
Translates to: LPPVTSWRGKPC*SHPGLSHTPVS
Trigger: CGATACAGGGGTGTGGGACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CCA 72 bp GGCTCTGGAAGGAAGCAGCTGCCACCGGTGACGTCCTaGAGAGGAAAGCCATGCTGGAGTCACCCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: GSGRKQLPPVTS*RGKPCWSHPGL
Trigger: CAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAGCTGCTTCCTTCCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
ENST00000470022.1
CDS CCA 72 bp CTCTCTGAGCTGATTTCCTTGAGTGCCAGATGGGGCTaGGGTGCCTCTCCAAGCTCGCGGCAGGGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: LSELISLSARWG*GASPSSRQGAC
Trigger: GCAAGCCCCCTGCCGCGAGCTTGGAGAGGCACCCCAGCCCCATCTGGCACTCAAGGAAATCAGCTCAGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000470022.1
CDS CAA 90 bp GTGTGGCTGCTTCCATTCTCCCGTCCATGCTTCGGTGCTCAGCCATaGCGGGGGCAGCTGGCAGCTCTGAAGCAGGATGGAGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: VWLLPFSRPCFGAQP*RGQLAALKQDGASG
Trigger: GCCAGAGGCTCCATCCTGCTTCAGAGCTGCCAGCTGCCCCCGCAATGGCTGAGCACCGAAGCATGGACGGGAGAATGGAAGCAGCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
ENST00000467651.2
ENST00000470022.1
CDS CCA 72 bp CTCAACCTCTCTGAGCTGATTTCCTTGAGTGCCAGATaGGGCTGGGGTGCCTCTCCAAGCTCGCGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LNLSELISLSAR*GWGASPSSRQG
Trigger: CCCCTGCCGCGAGCTTGGAGAGGCACCCCAGCCCCATCTGGCACTCAAGGAAATCAGCTCAGAGAGGTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000470022.1
CDS GCA 72 bp CAGGGTCACTCTGAGTCAGCCCTGGGACGGTTCTGGTaGAATAGACAGGCAGCCCAAGGTCGGGATTCCCGT +
Preference number: 6 (lower is better)
Translates to: QGHSESALGRFW*NRQAAQGRDSR
Trigger: ACGGGAATCCCGACCTTGGGCTGCCTGTCTATTGCACCAGAACCGTCCCAGGGCTGACTCAGAGTGACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 72 bp GAAGGGAGTCGGACGCACCTCATGCCTCCTCCCTGCTaGAATTCAGGCACAGCATCAGCATCACCTCAGGCC +
Preference number: 6 (lower is better)
Translates to: EGSRTHLMPPPC*NSGTASASPQA
Trigger: GGCCTGAGGTGATGCTGATGCTGTGCCTGAATTCCAGCAGGGAGGAGGCATGAGGTGCGTCCGACTCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CAA 72 bp CTTCCATTCTCCCGTCCATGCTTCGGTGCTCAGCCATaGCGGGGGCAGCTGGCAGCTCTGAAGCAGGATGGA +
Preference number: 6 (lower is better)
Translates to: LPFSRPCFGAQP*RGQLAALKQDG
Trigger: TCCATCCTGCTTCAGAGCTGCCAGCTGCCCCCGCAATGGCTGAGCACCGAAGCATGGACGGGAGAATGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
ENST00000467651.2
ENST00000470022.1
CDS CAA 90 bp GGGACAGTGGCGGAGAGGGCGGCTCTGCCTTTGCTGAGGTTGACGTaGTACAGGGAGTCAATGTTCTCCCTGGCAAACTCGTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GTVAERAALPLLRLT*YRESMFSLANSSSS
Trigger: GCTGCTGGACGAGTTTGCCAGGGAGAACATTGACTCCCTGTACAACGTCAACCTCAGCAAAGGCAGAGCCGCCCTCTCCGCCACTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325425.12
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS CAA 90 bp CTGTGTGGCCTTCCCGAGTTACTCAACCTCTCTGAGCTGATTTCCTaGAGTGCCAGATGGGGCTGGGGTGCCTCTCCAAGCTCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: LCGLPELLNLSELIS*SARWGWGASPSSRQ
Trigger: CTGCCGCGAGCTTGGAGAGGCACCCCAGCCCCATCTGGCACTCAAGGAAATCAGCTCAGAGAGGTTGAGTAACTCGGGAAGGCCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000470022.1
CDS TCA 72 bp AGAGGGGGTAGCCACAGAGCACATGTCCAGCACTGGTaGATCCACATGGTCCTCCCCCTCTTCTGGGCCATC +
Preference number: 6 (lower is better)
Translates to: RGGSHRAHVQHW*IHMVLPLFWAI
Trigger: GATGGCCCAGAAGAGGGGGAGGACCATGTGGATTCACCAGTGCTGGACATGTGCTCTGTGGCTACCCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338555.6
ENST00000379101.8
ENST00000379116.10
ENST00000400928.7
CDS GCA 72 bp CTCAGCTGTGATGGGAAGGGAGTCGGACGCACCTCATaGCTCCTCCCTGCTGGAATTCAGGCACAGCATCAG +
Preference number: 6 (lower is better)
Translates to: LSCDGKGVGRTS*LLPAGIQAQHQ
Trigger: CTGATGCTGTGCCTGAATTCCAGCAGGGAGGAGGCATGAGGTGCGTCCGACTCCCTTCCCATCACAGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 72 bp ACTCAGGGTCACTCTGAGTCAGCCCTGGGACGGTTCTaGTGCAATAGACAGGCAGCCCAAGGTCGGGATTCC +
Preference number: 6 (lower is better)
Translates to: TQGHSESALGRF*CNRQAAQGRDS
Trigger: GGAATCCCGACCTTGGGCTGCCTGTCTATTGCACCAGAACCGTCCCAGGGCTGACTCAGAGTGACCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338555.6
CDS CCA 72 bp CTGCCACCGGTGACGTCCTGGAGAGGAAAGCCATGCTaGAGTCACCCAGGCCTGTGTGAATCACAGCTTCGT +
Preference number: 6 (lower is better)
Translates to: LPPVTSWRGKPC*SHPGLCESQLR
Trigger: ACGAAGCTGTGATTCACACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTCCAGGACGTCACCGGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000470022.1
CDS TCA 72 bp CTGGCTGTGTGGCCTTCCCGAGTTACTCAACCTCTCTaGGCTGATTTCCTTGAGTGCCAGATGGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LAVWPSRVTQPL*ADFLECQMGLG
Trigger: CCCCAGCCCCATCTGGCACTCAAGGAAATCAGCTCAGAGAGGTTGAGTAACTCGGGAAGGCCACACAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000470022.1
CDS TCA 72 bp GAGAGGAAAGCCATGCTGGAGTCACCCAGGCCTGTGTaGATCACAGCTTCGTCACTGGCTGTGTGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: ERKAMLESPRPV*ITASSLAVWPS
Trigger: GGAAGGCCACACAGCCAGTGACGAAGCTGTGATTCACACAGGCCTGGGTGACTCCAGCATGGCTTTCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000470022.1
CDS GCA 72 bp GGAGCGGTGTTGTCTTCTGTGACAGCACTGCCCTCATaGCTCCTCCCTGCTGGAATTCAGGCACAGCATCAG +
Preference number: 6 (lower is better)
Translates to: GAVLSSVTALPS*LLPAGIQAQHQ
Trigger: CTGATGCTGTGCCTGAATTCCAGCAGGGAGGAGGCATGAGGGCAGTGCTGTCACAGAAGACAACACCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379101.8
ENST00000379116.10
CDS GCA 72 bp GTCTTCTGTGACAGCACTGCCCTCATGCCTCCTCCCTaGTGGAATTCAGGCACAGCATCAGCATCACCTCAG +
Preference number: 6 (lower is better)
Translates to: VFCDSTALMPPP*WNSGTASASPQ
Trigger: CTGAGGTGATGCTGATGCTGTGCCTGAATTCCAGCAGGGAGGAGGCATGAGGGCAGTGCTGTCACAGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379101.8
ENST00000379116.10
CDS CCA 72 bp AGTCACCCAGGCCTGTGTGAATCACAGCTTCGTCACTaGCTGTGTGGCCTTCCCGAGTTACTCAACCTCTCT +
Preference number: 6 (lower is better)
Translates to: SHPGLCESQLRH*LCGLPELLNLS
Trigger: AGAGAGGTTGAGTAACTCGGGAAGGCCACACAGCCAGTGACGAAGCTGTGATTCACACAGGCCTGGGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325425.12
ENST00000470022.1
CDS TCA 72 bp CCCCTGGTCTTAGCCATGGGCATTCCAAAGTTAACCTaGAAAACTAGCTCAGCTGTGATGGGAAGGGAGTCG +
Preference number: 6 (lower is better)
Translates to: PLVLAMGIPKLT*KTSSAVMGRES
Trigger: CGACTCCCTTCCCATCACAGCTGAGCTAGTTTTTCAGGTTAACTTTGGAATGCCCATGGCTAAGACCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338555.6