RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCNN1A (Homo sapiens)

Ensembl gene IDs: ENSG00000111319

Ensembl transcript IDs: ENST00000228916.7, ENST00000338748.9, ENST00000360168.7, ENST00000396966.6, ENST00000457871.2, ENST00000536087.1, ENST00000536176.1, ENST00000536411.1, ENST00000536788.1, ENST00000538957.1, ENST00000538979.5, ENST00000539953.1, ENST00000540037.5, ENST00000541249.5, ENST00000542260.1, ENST00000542436.1, ENST00000542966.1, ENST00000543585.1, ENST00000543768.1, ENST00000544882.1, ENST00000545605.1

Found 922 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACATCTGTGCTACTGGAGAGCAGTGTGGCCAGGCCAGTCGGGGGCTaGCTTAAGCCGTCGCTGGGCAGGAAACCCGTGCATGCCTGCGTG +
Preference number: 1 (lower is better)
Translates to: TSVLLESSVARPVGG*LKPSLGRKPVHACV
Trigger: CACGCAGGCATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTAGCACAGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 90 bp TGCCAGGGTGGAGGCTACCTCCTGAGCACCCCTGCCCCCTCGGCCTaGAGACCAGTATCGGCTTCGGAACCTTCGGAGCAGCATGAGGAA +
Preference number: 1 (lower is better)
Translates to: CQGGGYLLSTPAPSA*RPVSASEPSEQHEE
Trigger: TTCCTCATGCTGCTCCGAAGGTTCCGAAGCCGATACTGGTCTCCAGGCCGAGGGGGCAGGGGTGCTCAGGAGGTAGCCTCCACCCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR CCA 90 bp AGAGCAGTGTGGCCAGGCCAGTCGGGGGCTGGCTTAAGCCGTCGCTaGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTTGGTTGTGTT +
Preference number: 1 (lower is better)
Translates to: RAVWPGQSGAGLSRR*AGNPCMPACTLGCV
Trigger: AACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCTGGCCACACTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 90 bp GGGGCATGGCTCTGTGAGGGCACGGGTATGAGGCTAGAGGAGCCCTaGGTCTGCCTTTACTTACCCGGGTCTGCTCTAGCCCTAGCCCTC +
Preference number: 1 (lower is better)
Translates to: GAWLCEGTGMRLEEP*VCLYLPGSALALAL
Trigger: GAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTAAAGGCAGACCCAGGGCTCCTCTAGCCTCATACCCGTGCCCTCACAGAGCCATGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR GCA 90 bp TGGCTCTGTGAGGGCACGGGTATGAGGCTAGAGGAGCCCTGGGTCTaGCTTTACTTACCCGGGTCTGCTCTAGCCCTAGCCCTCGGGAGT +
Preference number: 1 (lower is better)
Translates to: WLCEGTGMRLEEPWV*LYLPGSALALALGS
Trigger: ACTCCCGAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTAAAGGCAGACCCAGGGCTCCTCTAGCCTCATACCCGTGCCCTCACAGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR GCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAG +
Preference number: 1 (lower is better)
Translates to: PPHINGSLGGSERKP*TSFNLARASTLPPE
Trigger: CTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR GCA 90 bp GGGTGGGGTTTCCCACCCAAGTTCAAGAGGAGGAGCAGACATCTGTaGTACTGGAGAGCAGTGTGGCCAGGCCAGTCGGGGGCTGGCTTA +
Preference number: 1 (lower is better)
Translates to: GWGFPPKFKRRSRHL*YWRAVWPGQSGAGL
Trigger: TAAGCCAGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTAGCACAGATGTCTGCTCCTCCTCTTGAACTTGGGTGGGAAACCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 90 bp AAGTTCAAGAGGAGGAGCAGACATCTGTGCTACTGGAGAGCAGTGTaGCCAGGCCAGTCGGGGGCTGGCTTAAGCCGTCGCTGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: KFKRRSRHLCYWRAV*PGQSGAGLSRRWAG
Trigger: TCCTGCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTAGCACAGATGTCTGCTCCTCCTCTTGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 90 bp ATCTCCACCACAGACAACACCGAGGAGCCGAACCACAGGCTCCACTaGCTGCCCAGGTTGGACAGGAGGGTGACCATCGTGACAGAGGGA +
Preference number: 1 (lower is better)
Translates to: ISTTDNTEEPNHRLH*LPRLDRRVTIVTEG
Trigger: TCCCTCTGTCACGATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTCCTCGGTGTTGTCTGTGGTGGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR TCA 90 bp AGAGGTATGAAAGACACAGGGCAGAGGTGCCGGGGCATGGCTCTGTaGGGGCACGGGTATGAGGCTAGAGGAGCCCTGGGTCTGCCTTTA +
Preference number: 1 (lower is better)
Translates to: RGMKDTGQRCRGMAL*GHGYEARGALGLPL
Trigger: TAAAGGCAGACCCAGGGCTCCTCTAGCCTCATACCCGTGCCCTCACAGAGCCATGCCCCGGCACCTCTGCCCTGTGTCTTTCATACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR TCA 90 bp CGTGCACCATTACCCGGGCCCCAGTCACTGTGGACAGCAGGGGAATaGAGTCATTCTGCTCTGCGCGCAGCATCAGGGACAGACCGTTGT +
Preference number: 1 (lower is better)
Translates to: RAPLPGPQSLWTAGE*SHSALRAASGTDRC
Trigger: ACAACGGTCTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCACAGTGACTGGGGCCCGGGTAATGGTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR GCA 90 bp GGCCAGTCGGGGGCTGGCTTAAGCCGTCGCTGGGCAGGAAACCCGTaGATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCA +
Preference number: 1 (lower is better)
Translates to: GQSGAGLSRRWAGNP*MPACTLGCVLSWLS
Trigger: TGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 90 bp GGTTTCCCACCCAAGTTCAAGAGGAGGAGCAGACATCTGTGCTACTaGAGAGCAGTGTGGCCAGGCCAGTCGGGGGCTGGCTTAAGCCGT +
Preference number: 1 (lower is better)
Translates to: GFPPKFKRRSRHLCY*RAVWPGQSGAGLSR
Trigger: ACGGCTTAAGCCAGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTAGCACAGATGTCTGCTCCTCCTCTTGAACTTGGGTGGGAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR TCA 90 bp CCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCAC +
Preference number: 1 (lower is better)
Translates to: PSCFPSTHQRQFGRL*EEALHILQSCQGQH
Trigger: GTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR GCA 90 bp TATGAGGCTAGAGGAGCCCTGGGTCTGCCTTTACTTACCCGGGTCTaGTCTAGCCCTAGCCCTCGGGAGTCAGGGAAGGGGAATTGCCTA +
Preference number: 1 (lower is better)
Translates to: YEARGALGLPLLTRV*SSPSPRESGKGNCL
Trigger: TAGGCAATTCCCCTTCCCTGACTCCCGAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTAAAGGCAGACCCAGGGCTCCTCTAGCCTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR GCA 90 bp GGCCGCAAGTTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGGGCCCCAGTCACTGTGGACAGCAGG +
Preference number: 1 (lower is better)
Translates to: GRKLKPPSSIKAGSS*PCTITRAPVTVDSR
Trigger: CCTGCTGTCCACAGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAACTTGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR GCA 90 bp GGCCCCAGTCACTGTGGACAGCAGGGGAATGAAGTCATTCTGCTCTaGGCGCAGCATCAGGGACAGACCGTTGTTGATTCCAGGCATGGA +
Preference number: 1 (lower is better)
Translates to: GPSHCGQQGNEVILL*AQHQGQTVVDSRHG
Trigger: TCCATGCCTGGAATCAACAACGGTCTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCACAGTGACTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR CCA 90 bp GAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCA +
Preference number: 1 (lower is better)
Translates to: EPLPILLPLHTSTAV*AALRGSPAHPSILP
Trigger: TGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR GCA 90 bp AAGTTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCAGTCACTGTGGACAGCAGGGGAATG +
Preference number: 1 (lower is better)
Translates to: KLKPPSSIKAGSSCP*TITRAPVTVDSRGM
Trigger: CATTCCCCTGCTGTCCACAGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR CCA 90 bp GCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACA +
Preference number: 1 (lower is better)
Translates to: AGAKALLGSFISYCS*SNFLSPYPSCFPST
Trigger: TGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR CCA 90 bp TGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTG +
Preference number: 1 (lower is better)
Translates to: WGNQSVQRQYQGVQG*SQGTSGQLHQLLFL
Trigger: CAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR TCA 90 bp CACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGT +
Preference number: 1 (lower is better)
Translates to: HFWAASSATVLGATS*ALTHLASPPHINGS
Trigger: ACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR CCA 90 bp AAGCCGTCGCTGGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTTaGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTC +
Preference number: 1 (lower is better)
Translates to: KPSLGRKPVHACVYP*LCFVLVISGFLGKF
Trigger: GAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCAGCGACGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR GCA 90 bp TTGAAGGGTAAAGGTTCTCAACAGGAACATCACTGCCATTCTTGGTaGAGTCGCCATAATCGCCCCCAAGTCTGTCCAGGGTTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: LKGKGSQQEHHCHSW*SRHNRPQVCPGFPS
Trigger: GGAAGGAAACCCTGGACAGACTTGGGGGCGATTATGGCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTGAGAACCTTTACCCTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR GCA 90 bp GCTGTGTGTACTTTGAAGGGTAAAGGTTCTCAACAGGAACATCACTaGCATTCTTGGTGCAGTCGCCATAATCGCCCCCAAGTCTGTCCA +
Preference number: 1 (lower is better)
Translates to: AVCTLKGKGSQQEHH*HSWCSRHNRPQVCP
Trigger: TGGACAGACTTGGGGGCGATTATGGCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTGAGAACCTTTACCCTTCAAAGTACACACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR CCA 90 bp AGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTaGCTGATCCAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: SGFLGKFLVKAPSFA*LIQGKKRLSRSWVG
Trigger: CCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR CCA 90 bp ACTTTGAAGGGTAAAGGTTCTCAACAGGAACATCACTGCCATTCTTaGTGCAGTCGCCATAATCGCCCCCAAGTCTGTCCAGGGTTTCCT +
Preference number: 1 (lower is better)
Translates to: TLKGKGSQQEHHCHS*CSRHNRPQVCPGFP
Trigger: AGGAAACCCTGGACAGACTTGGGGGCGATTATGGCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTGAGAACCTTTACCCTTCAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR GCA 90 bp GAAGCGTTCACAAAAGTAATGGTGTCTGAGCAGGGTTCTAAGGGATaGATAGGAGTTCTCTGGCAGATGGTTGGGGAAACTTTCAGGCTG +
Preference number: 1 (lower is better)
Translates to: EAFTKVMVSEQGSKG*IGVLWQMVGETFRL
Trigger: CAGCCTGAAAGTTTCCCCAACCATCTGCCAGAGAACTCCTATGCATCCCTTAGAACCCTGCTCAGACACCATTACTTTTGTGAACGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 90 bp ACGGGCAAGATTCAGTCCCTGACCGCAAGGCACTTACAGTCTAGTTaGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGCA +
Preference number: 1 (lower is better)
Translates to: TGKIQSLTARHLQSS*EGRHKCTRKYGATA
Trigger: TGCTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTGCCTTGCGGTCAGGGACTGAATCTTGCCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp GAGCCGAACCACAGGCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCATCGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: EPNHRLHWLPRLDRRVTIGSSCP*TITRAP
Trigger: TGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACC...GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR CCA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACCCCTGCAGAGCCCCCTaGAGATGGGCGGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHPCRAP*RWAGAQ
Trigger: CTGGGCCCCCGCCCATCTCCAGGGGGCTCTGCAGGG...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR-3UTR CCA 90 bp GAGCCGAACCACAGGCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCATCGCTGGTCACGCTGCATaGCTTCCGGCACTTGGTGAA +
Preference number: 2 (lower is better)
Translates to: EPNHRLHWLPRLDRRVTIAGHAA*LPALGE
Trigger: TTCACCAAGTGCCGGAAGCCATGCAGCGTGACCAGC...GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR CCA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCGGGAGGATGCCAGGGTaGAGGCTACCTCCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGGRMPG*RLPPEH
Trigger: GTGCTCAGGAGGTAGCCTCCACCCTGGCATCCTCCC...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR CAA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: AVWAALRGSPAHPSI*PGPAPSHQRSICLG
Trigger: ACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR TCA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCGCTTCCGGCACTTGGTaGAACAGCCCAGGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGASGTW*NSPGGL
Trigger: CAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGC...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR GCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 2 (lower is better)
Translates to: GGSERKPCTSFNLARASTHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR GCA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTTACTTACCCGGGTCTaGTCTAGCCCTAGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: AALRGSPAHPSILPGPAPLLTRV*SSPSPR
Trigger: CCGAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTAA...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGACAGGCTCCACTGGCTaGCCAGGTTGGACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRTGSTG*PGWTGG
Trigger: CCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGT...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR-3UTR CCA 90 bp GAGCCGAACCACAGGCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCATCACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: EPNHRLHWLPRLDRRVTITSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR-3UTR CCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCAGGCCAGTCGGGGGCTaGCTTAAGCCGTCGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPRPVGG*LKPSLG
Trigger: GCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCT...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACCCCCCAGAGGACAGGTaGAGGAACTGGCCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHPPEDR*RNWPLQ
Trigger: CTGCAGGGGCCAGTTCCTCCACCTGTCCTCTGGGGG...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR-3UTR TCA 90 bp GTTGGGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 2 (lower is better)
Translates to: VGWGNQSVQRQYQGVQGWQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...CCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR GCA 90 bp GAGCCGAACCACAGGCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCATCCACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 2 (lower is better)
Translates to: EPNHRLHWLPRLDRRVTIHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRQGVQG*SQGTSG
Trigger: CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTG...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CCA 90 bp GGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGCAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GETRVFRGSTKGYRAGAKQGVQG*SQGTSG
Trigger: CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTG...CTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR TCA 90 bp GTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: VQRQYQGVQGWSQGTSGQASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...CTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR TCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: PPHINGSLGGSERKPCTSASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR GCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGCAGGAAACCCGTGCATaGCTGCGTGTACCCTTGGTT +
Preference number: 2 (lower is better)
Translates to: SILPGPAPSHQRSICLGVQETRA*LRVPLV
Trigger: AACCAAGGGTACACGCAGGCATGCACGGGTTTCCTG...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGGAGGAGCCCTGGGTCTaGCTTTACTTACCCGGGTCT +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGREEPWV*LYLPGS
Trigger: AGACCCGGGTAAGTAAAGGCAGACCCAGGGCTCCTC...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGG +
Preference number: 2 (lower is better)
Translates to: PILLPLHTSTAVWAALRGKAGSS*PCTITR
Trigger: CCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTT...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGACAAGGACAGAGACATaGGGTGGGGGCAGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRTRTET*GGGRSG
Trigger: CCCACTTCTGCCCCCACCCCATGTCTCTGTCCTTGT...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR-3UTR TCA 90 bp GGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 2 (lower is better)
Translates to: GSPGEGGVINFGEDKMWQQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...CTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR TCA 90 bp TCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGCTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCT +
Preference number: 2 (lower is better)
Translates to: SFNLARASTLPPEEHLPWLGATS*ALTHLA
Trigger: AGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAG...CCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR GCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGCACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 2 (lower is better)
Translates to: SILPGPAPSHQRSICLGVHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR GCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCTCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCC +
Preference number: 2 (lower is better)
Translates to: GGSERKPCTSFNLARASTSERKP*TSFNLA
Trigger: GGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR GCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTCAGGAAACCCGTGCATaGCTGCGTGTACCCTTGGTT +
Preference number: 2 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPQETRA*LRVPLV
Trigger: AACCAAGGGTACACGCAGGCATGCACGGGTTTCCTG...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCAGGGAAGGGGAATTaGCTAAGTAACAAAGGGGGC +
Preference number: 2 (lower is better)
Translates to: AALRGSPAHPSILPGPAPSGKGN*LSNKGG
Trigger: GCCCCCTTTGTTACTTAGGCAATTCCCCTTCCCTGA...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRTSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR CCA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: PILLPLHTSTAVWAALRGTSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR CCA 90 bp CGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCACAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: REPRRRRSDQFWGRQDVAQGVQG*SQGTSG
Trigger: CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTG...TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGGCTTAAGCCGTCGCTaGGCAGGAAACCCGTGCATG +
Preference number: 2 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWGLSRR*AGNPCM
Trigger: CATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCC...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAAGGGGGCTTTTGGGTaGGGTTTCCCACCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: PLPILLPLHTSTAVWAALKGAFG*GFPPKF
Trigger: GAACTTGGGTGGGAAACCCCACCCAAAAGCCCCCTT...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGAGGCTAGAGGAGCCCTaGGTCTGCCTTTACTTACCC +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRRLEEP*VCLYLP
Trigger: GGGTAAGTAAAGGCAGACCCAGGGCTCCTCTAGCCT...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CAA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: GWSQGTSGQLHQLLF*EQLPEPLPILLPLH
Trigger: GTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR TCA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 2 (lower is better)
Translates to: AKALLGSFISYCSWSNFLQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR TCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCT +
Preference number: 2 (lower is better)
Translates to: AVWAALRGSPAHPSILPGLGATS*ALTHLA
Trigger: AGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAG...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR TCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGCACAGCCACACTCCTTaGTCATGCTCTCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: LTHLASPPHINGSLGGSEHSHTP*SCSPGS
Trigger: GCTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTG...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR GCA 90 bp AGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 2 (lower is better)
Translates to: SVQRQYQGVQGWSQGTSGHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR GCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 2 (lower is better)
Translates to: HINGSLGGSERKPCTSFNHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR GCA 90 bp GGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGCACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 2 (lower is better)
Translates to: GSPGEGGVINFGEDKMWQHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...CTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGGAGCCAAGGCACTTCTaGGCAGCTTCATCAGCTACT +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGREPRHF*AASSAT
Trigger: AGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTC...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGAGACTTAGCCGCAGTTaGGTGGGGAAACCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRRLSRS*VGKPEC
Trigger: ACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCT...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CCA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGGGCTTAAGCCGTCGCTaGGCAGGAAACCCGTGCATG +
Preference number: 2 (lower is better)
Translates to: AKALLGSFISYCSWSNFLGLSRR*AGNPCM
Trigger: CATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCC...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTGCATAGGAGTTCTCTaGCAGATGGTTGGGGAAACT +
Preference number: 2 (lower is better)
Translates to: AALRGSPAHPSILPGPAPCIGVL*QMVGET
Trigger: AGTTTCCCCAACCATCTGCCAGAGAACTCCTATGCA...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR TCA 90 bp GCAGTACCCCCAGGAACTGTGCTTTCTGTAGTCACAGTACTCCACGTTCTGGGGGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: AVPPGTVLSVVTVLHVLGASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...CCCCAGAACGTGGAGTACTGTGACTACAGAAAGCACAGTTCCTGGGGGTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR TCA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: STAVWAALRGSPAHPSILASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR TCA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 2 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPEQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR GCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGTCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCC +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRSERKP*TSFNLA
Trigger: GGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR GCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTAGCCCTTACCCATCTTaGTTCCCCTCCACACATCAA +
Preference number: 2 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPSPYPS*FPSTHQ
Trigger: TTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCT...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR GCA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGAAGTCATTCTGCTCTaGGCGCAGCATCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWEVILL*AQHQGQ
Trigger: CTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTC...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR CCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPTSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CCA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGISYCS*SNFLSP
Trigger: AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGAT...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CCA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACAGACTTAGCCGCAGTTaGGTGGGGAAACCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHRLSRS*VGKPEC
Trigger: ACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCT...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGGCCTGCGTGTACCCTTaGTTGTGTTTTGTCCTGGTT +
Preference number: 2 (lower is better)
Translates to: AVWAALRGSPAHPSILPGACVYP*LCFVLV
Trigger: AACCAGGACAAAACACAACCAAGGGTACACGCAGGC...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATAGGCCAGTCGGGGGCTaGCTTAAGCCGTCGCTGGGC +
Preference number: 2 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADRPVGG*LKPSLG
Trigger: GCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCT...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp GGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAGACATCTGTGCTACTaGAGAGCAGTGTGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GSPGEGGVINFGEDKMWQRHLCY*RAVWPG
Trigger: GCCTGGCCACACTGCTCTCCAGTAGCACAGATGTCT...CTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCATCACTGCCATTCTTaGTGCAGTCGCCATAATCGC +
Preference number: 2 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRHHCHS*CSRHNR
Trigger: GCGATTATGGCGACTGCACCAAGAATGGCAGTGATG...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR CCA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAATGGAAGACCCATTCCTaGGATGTCACCGAGGGCCAT +
Preference number: 2 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQWKTHS*DVTEGH
Trigger: ATGGCCCTCGGTGACATCCCAGGAATGGGTCTTCCA...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR TCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCGGGACAGACCGTTGTTaGTTCCAGGCATGGAAGACA +
Preference number: 2 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPGTDRC*FQAWKT
Trigger: TGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCC...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR GCA 90 bp CCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTCACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 2 (lower is better)
Translates to: PGEGGVINFGEDKMWQKRHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...ACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACAGCCCTTACCCATCTTaGTTCCCCTCCACACATCAA +
Preference number: 2 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHSPYPS*FPSTHQ
Trigger: TTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCT...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR GCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATAAACCCGTGCATGCCTaGGTGTACCCTTGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: HINGSLGGSERKPCTSFNKPVHA*VYPWLC
Trigger: ACACAACCAAGGGTACACGCAGGCATGCACGGGTTT...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAATACTGGAGAGCAGTGTaGCCAGGCCAGTCGGGGGCT +
Preference number: 2 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQYWRAV*PGQSGA
Trigger: AGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTA...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp AGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCAGAGGTGCCGGGGCATaGCTCTGTGAGGGCACGGGT +
Preference number: 2 (lower is better)
Translates to: SGFLGKFLVKAPSFAWLIRGAGA*LCEGTG
Trigger: ACCCGTGCCCTCACAGAGCCATGCCCCGGCACCTCT...GATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CAA 90 bp CCGTCGCTGGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTTGGTaGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTT +
Preference number: 2 (lower is better)
Translates to: PSLGRKPVHACVYPW*CFVLVISGFLGKFL
Trigger: AAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCAGCGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR TCA 90 bp CAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGGAAACCAGAGTGTTCAGAGGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: QGKKRLSRSWVGKPECSEASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...CTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR TCA 90 bp TTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAGTGGAGGCTACCTCCTaGGCACCCCTGCCCCCTCGG +
Preference number: 2 (lower is better)
Translates to: LVVFCPGYQRFLRKVPCQVEATS*APLPPR
Trigger: CCGAGGGGGCAGGGGTGCTCAGGAGGTAGCCTCCAC...TTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR-3UTR GCA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGTCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCC +
Preference number: 2 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGSERKP*TSFNLA
Trigger: GGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR CCA 90 bp CGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: RACLRVPLVVFCPGYQRFTSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...AAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: LTHLASPPHINGSLGGSEISYCS*SNFLSP
Trigger: AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGAT...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR CCA 90 bp GCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTGAGCCAAGGCACTTCTaGGCAGCTTCATCAGCTACT +
Preference number: 2 (lower is better)
Translates to: ALLGSFISYCSWSNFLSPEPRHF*AASSAT
Trigger: AGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTC...AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CCA 90 bp CTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGAGACTTAGCCGCAGTTaGGTGGGGAAACCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: LREPRRRRSDQFWGRQDVRLSRS*VGKPEC
Trigger: ACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCT...CACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGGCTCCAAGTTTCGCTTaGCTGATCCAAGGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: LTHLASPPHINGSLGGSEAPSFA*LIQGKK
Trigger: CTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGC...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR CAA 90 bp GGAATGAAGTCATTCTGCTCTGCGCGCAGCATCAGGGACAGACCGTaGTTGATTCCAGGCATGGAAGACATCCAGAGGTTGGAGTTGTTC +
Preference number: 2 (lower is better)
Translates to: GMKSFCSARSIRDRP*LIPGMEDIQRLELF
Trigger: GAACAACTCCAACCTCTGGATGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTCATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR TCA 90 bp GCAAGGCACTTACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATCGGGGCATGGCTCTGTaGGGGCACGGGTATGAGGCT +
Preference number: 2 (lower is better)
Translates to: ARHLQSSWEGRHKCTRKYRGMAL*GHGYEA
Trigger: AGCCTCATACCCGTGCCCTCACAGAGCCATGCCCCG...ATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp CGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 2 (lower is better)
Translates to: RACLRVPLVVFCPGYQRFHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...AAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp CCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTAAACCCGTGCATGCCTaGGTGTACCCTTGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: PGEGGVINFGEDKMWQKRKPVHA*VYPWLC
Trigger: ACACAACCAAGGGTACACGCAGGCATGCACGGGTTT...ACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp TGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAGAGCCAAGGCACTTCTaGGCAGCTTCATCAGCTACT +
Preference number: 2 (lower is better)
Translates to: CYSVLREPRRRRSDQFWGEPRHF*AASSAT
Trigger: AGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTC...TCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTAGACTTAGCCGCAGTTaGGTGGGGAAACCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: RACLRVPLVVFCPGYQRFRLSRS*VGKPEC
Trigger: ACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCT...AAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAGGCTTAAGCCGTCGCTaGGCAGGAAACCCGTGCATG +
Preference number: 2 (lower is better)
Translates to: RFLRKVPCQSSKFRLADPGLSRR*AGNPCM
Trigger: CATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCC...TGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CAA 90 bp ATGAAGTCATTCTGCTCTGCGCGCAGCATCAGGGACAGACCGTTGTaGATTCCAGGCATGGAAGACATCCAGAGGTTGGAGTTGTTCTTG +
Preference number: 2 (lower is better)
Translates to: MKSFCSARSIRDRPL*IPGMEDIQRLELFL
Trigger: CAAGAACAACTCCAACCTCTGGATGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR TCA 90 bp CGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGGGAAACTTTCAGGCTaGGGAAATATCTCAAGCAGA +
Preference number: 2 (lower is better)
Translates to: REPRRRRSDQFWGRQDVAGKLSG*GNISSR
Trigger: TCTGCTTGAGATATTTCCTCAGCCTGAAAGTTTCCC...TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR TCA 90 bp AGGGTAAAGGTTCTCAACAGGAACATCACTGCCATTCTTGGTGCAGTCGCCATATGGACAGCAGGGGAATaGAGTCATTCTGCTCTGCGC +
Preference number: 2 (lower is better)
Translates to: RVKVLNRNITAILGAVAIWTAGE*SHSALR
Trigger: GCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCA...TATGGCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTGAGAACCTTTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR GCA 90 bp GTTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTGCCCGTGCACCATTACCACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 2 (lower is better)
Translates to: VKATIIHKGRFILPVHHYHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...GTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR GCA 90 bp CGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCACACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 2 (lower is better)
Translates to: RFLRKVPCQSSKFRLADPHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...TGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR GCA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGTCAGGGAAGGGGAATTaGCTAAGTAACAAAGGGGGC +
Preference number: 2 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPESGKGN*LSNKGG
Trigger: GCCCCCTTTGTTACTTAGGCAATTCCCCTTCCCTGA...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp AAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGCAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: KVPCQSSKFRLADPREKEQGVQG*SQGTSG
Trigger: CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTG...CTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CCA 90 bp CGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: RACLRVPLVVFCPGYQRFISYCS*SNFLSP
Trigger: AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGAT...AAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp CGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGAGCAGACATCTGTaGTACTGGAGAGCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: RFLRKVPCQSSKFRLADPRSRHL*YWRAVW
Trigger: CCACACTGCTCTCCAGTAGCACAGATGTCTGCTCCT...TGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR GCA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATAGGAGCAGACATCTGTaGTACTGGAGAGCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADRSRHL*YWRAVW
Trigger: CCACACTGCTCTCCAGTAGCACAGATGTCTGCTCCT...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR TCA 90 bp TATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTCTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCT +
Preference number: 2 (lower is better)
Translates to: YQRFLRKVPCQSSKFRLALGATS*ALTHLA
Trigger: AGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAG...AGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CCA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAAGCTCCAAGTTTCGCTTaGCTGATCCAAGGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQAPSFA*LIQGKK
Trigger: CTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGC...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATTGTCGCGATAGCATCTaGAAGACCCATTCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADCRDSI*KTHSWD
Trigger: ATCCCAGGAATGGGTCTTCCAGATGCTATCGCGACA...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR GCA 90 bp AAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGAGCCCTTACCCATCTTaGTTCCCCTCCACACATCAA +
Preference number: 2 (lower is better)
Translates to: KVPCQSSKFRLADPREKESPYPS*FPSTHQ
Trigger: TTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCT...CTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR GCA 90 bp GCAAGGCACTTACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATAAACCCGTGCATGCCTaGGTGTACCCTTGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: ARHLQSSWEGRHKCTRKYKPVHA*VYPWLC
Trigger: ACACAACCAAGGGTACACGCAGGCATGCACGGGTTT...ATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTGCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp TGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAAAGGGGGCTTTTGGGTaGGGTTTCCCACCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: WLCFVLVISGFLGKFLVKKGAFG*GFPPKF
Trigger: GAACTTGGGTGGGAAACCCCACCCAAAAGCCCCCTT...TTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR TCA 90 bp GTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCCAAGTTTCGCTTGGCTaGTCCAAGGGAAAAAGAGAC +
Preference number: 2 (lower is better)
Translates to: VFCPGYQRFLRKVPCQSSQVSLG*SKGKRD
Trigger: GTCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTG...GGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR GCA 90 bp ACATTTATTGAGCTCCTGCCTACTTGCTCCAAGCAGGATGATGGGCTAGACATGTACAAGAAAGTATGGTaGAACAGCAACACTCCAGCA +
Preference number: 2 (lower is better)
Translates to: TFIELLPTCSKQDDGLDMYKKVW*NSNTPA
Trigger: TGCTGGAGTGTTGCTGTTGCACCATACTTTCTTGTA...CATGTCTAGCCCATCATCCTGCTTGGAGCAAGTAGGCAGGAGCTCAATAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR TCA 90 bp GCAAGGCACTTACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATAGACATGTAGAGGTATaGAAGACACAGGGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: ARHLQSSWEGRHKCTRKYRHVEV*KTQGRG
Trigger: ACCTCTGCCCTGTGTCTTTCATACCTCTACATGTCT...ATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTGCCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp TACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: YSLVGKGDTNVQESMVQQISYCS*SNFLSP
Trigger: AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGAT...CTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CCA 90 bp TGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCCTGCGTGTACCCTTaGTTGTGTTTTGTCCTGGTT +
Preference number: 2 (lower is better)
Translates to: WLCFVLVISGFLGKFLVKACVYP*LCFVLV
Trigger: AACCAGGACAAAACACAACCAAGGGTACACGCAGGC...TTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 72 bp TGGCCAGGCCAGTCGGGGGCTGGCTTAAGCCGTCGCTaGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTT +
Preference number: 3 (lower is better)
Translates to: WPGQSGAGLSRR*AGNPCMPACTL
Trigger: AAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR GCA 72 bp AGAGGAGCCCTGGGTCTGCCTTTACTTACCCGGGTCTaGTCTAGCCCTAGCCCTCGGGAGTCAGGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: RGALGLPLLTRV*SSPSPRESGKG
Trigger: CCCCTTCCCTGACTCCCGAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTAAAGGCAGACCCAGGGCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 72 bp AGGAGGAGCAGACATCTGTGCTACTGGAGAGCAGTGTaGCCAGGCCAGTCGGGGGCTGGCTTAAGCCGTCGC +
Preference number: 3 (lower is better)
Translates to: RRSRHLCYWRAV*PGQSGAGLSRR
Trigger: GCGACGGCTTAAGCCAGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTAGCACAGATGTCTGCTCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 72 bp CCCAAGTTCAAGAGGAGGAGCAGACATCTGTGCTACTaGAGAGCAGTGTGGCCAGGCCAGTCGGGGGCTGGC +
Preference number: 3 (lower is better)
Translates to: PKFKRRSRHLCY*RAVWPGQSGAG
Trigger: GCCAGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTAGCACAGATGTCTGCTCCTCCTCTTGAACTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 72 bp ACAGACAACACCGAGGAGCCGAACCACAGGCTCCACTaGCTGCCCAGGTTGGACAGGAGGGTGACCATCGTG +
Preference number: 3 (lower is better)
Translates to: TDNTEEPNHRLH*LPRLDRRVTIV
Trigger: CACGATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTCCTCGGTGTTGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR-3UTR CAA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 3 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CAA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 3 (lower is better)
Translates to: GGETRVFRGSTKGYRAGAAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR GCA 72 bp GGGGCTGGCTTAAGCCGTCGCTGGGCAGGAAACCCGTaGATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCC +
Preference number: 3 (lower is better)
Translates to: GAGLSRRWAGNP*MPACTLGCVLS
Trigger: GGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CAA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 3 (lower is better)
Translates to: PILLPLHTSTAVWAALRGAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR TCA 72 bp TTACCCGGGCCCCAGTCACTGTGGACAGCAGGGGAATaGAGTCATTCTGCTCTGCGCGCAGCATCAGGGACA +
Preference number: 3 (lower is better)
Translates to: LPGPQSLWTAGE*SHSALRAASGT
Trigger: TGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCACAGTGACTGGGGCCCGGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR GCA 72 bp ATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCCAGGGCCAGCACCCTC +
Preference number: 3 (lower is better)
Translates to: INGSLGGSERKP*TSFNLARASTL
Trigger: GAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR GCA 72 bp CCACCATCATCCATAAAGGCAGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCAGTCACTGTGGACAGC +
Preference number: 3 (lower is better)
Translates to: PPSSIKAGSSCP*TITRAPVTVDS
Trigger: GCTGTCCACAGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR CAA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR CAA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 3 (lower is better)
Translates to: SILPGPAPSHQRSICLGVEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR CAA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 3 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CAA 90 bp CAGTATCGGCTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 3 (lower is better)
Translates to: QYRLRNLRSSMRNMMTSRAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...CCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAGCCGATACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR-3UTR CAA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 3 (lower is better)
Translates to: PLPILLPLHTSTAVWAALEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR CAA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCCATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CAA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCCATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: GGETRVFRGSTKGYRAGAHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR TCA 72 bp GGTAGCTGGTCACGCTGCATGGCTTCCGGCACTTGGTaGAACAGCCCAGGTGGTCTGAGGAGAAGTCAACCT +
Preference number: 3 (lower is better)
Translates to: GSWSRCMASGTW*NSPGGLRRSQP
Trigger: AGGTTGACTTCTCCTCAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATGCAGCGTGACCAGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR CCA 72 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCA +
Preference number: 3 (lower is better)
Translates to: PILLPLHTSTAV*AALRGSPAHPS
Trigger: TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR CAA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: HINGSLGGSERKPCTSFNHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR-3UTR CAA 90 bp AGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 3 (lower is better)
Translates to: RVFRGSTKGYRAGAKALLEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...CAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR TCA 72 bp TTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATCCTTCAATCTTGCCAG +
Preference number: 3 (lower is better)
Translates to: FPSTHQRQFGRL*EEALHILQSCQ
Trigger: CTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
3UTR GCA 72 bp CCAGTCACTGTGGACAGCAGGGGAATGAAGTCATTCTaGTCTGCGCGCAGCATCAGGGACAGACCGTTGTTG +
Preference number: 3 (lower is better)
Translates to: PVTVDSRGMKSF*SARSIRDRPLL
Trigger: CAACAACGGTCTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCACAGTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR CAA 90 bp CCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 3 (lower is better)
Translates to: PGEGGVINFGEDKMWQKRAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...ACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CAA 90 bp AGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGCATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: RVFRGSTKGYRAGAKALLHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...CAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR TCA 72 bp TCTGCTCTGCGCGCAGCATCAGGGACAGACCGTTGTTaGTTCCAGGCATGGAAGACATCCAGAGGTTGGAGT +
Preference number: 3 (lower is better)
Translates to: SALRAASGTDRC*FQAWKTSRGWS
Trigger: ACTCCAACCTCTGGATGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCTGATGCTGCGCGCAGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR GCA 72 bp TTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGGGCCCCAGTCACTGTG +
Preference number: 3 (lower is better)
Translates to: LKPPSSIKAGSS*PCTITRAPVTV
Trigger: CACAGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR CCA 72 bp GTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTaGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACT +
Preference number: 3 (lower is better)
Translates to: VPRGTGLEPRHF*AASSATVLGAT
Trigger: AGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CAA 90 bp GGAAACCCGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCACACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: GNPCMPACTLGCVLSWLSHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...TGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CAA 90 bp CAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGGAAACCAGAGTGTTCAGAGCACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: QGKKRLSRSWVGKPECSEHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...CTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CAA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGCTCCAAGTTTCGCTaGGCTGATCCAAGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: PLPILLPLHTSTAVWAALSSKFR*ADPREK
Trigger: TTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCT...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CAA 90 bp GGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGTGCCTGCGTGTACCCTaGGTTGTGTTTTGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: GSPGEGGVINFGEDKMWQCLRVP*VVFCPG
Trigger: ACCAGGACAAAACACAACCAAGGGTACACGCAGGCA...CTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CAA 90 bp CCCCCAGGAACTGTGCTTTCTGTAGTCACAGTACTCCACGTTCTGGGGCCGCGGCCTGCTGTGTGTACTTaGAAGGGTAAAGGTTCTCAA +
Preference number: 3 (lower is better)
Translates to: PPGTVLSVVTVLHVLGPRPAVCT*KGKGSQ
Trigger: TTGAGAACCTTTACCCTTCAAAGTACACACAGCAGG...CCGCGGCCCCAGAACGTGGAGTACTGTGACTACAGAAAGCACAGTTCCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR CAA 90 bp TGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 3 (lower is better)
Translates to: CYSVLREPRRRRSDQFWGEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...TCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CAA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACAGCTCCAAGTTTCGCTaGGCTGATCCAAGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHSSKFR*ADPREK
Trigger: TTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCT...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR TCA 72 bp GCCGCGGATAGAAGATGTAGGCACAGCCACACTCCTTaGTCATGCTCTCCTGGAAGCAGGAGTGAATACACA +
Preference number: 3 (lower is better)
Translates to: AADRRCRHSHTP*SCSPGSRSEYT
Trigger: TGTGTATTCACTCCTGCTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTGCCTACATCTTCTATCCGCGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR GCA 72 bp TGGTGCAACAGCAACACTCCAGCAGATGTTATAGTGTaGTACGGGAGCCCAGGAGAAGGCGGAGTGATCAAT +
Preference number: 3 (lower is better)
Translates to: WCNSNTPADVIV*YGSPGEGGVIN
Trigger: ATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCTGCTGGAGTGTTGCTGTTGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR GCA 72 bp AAAGGTTCTCAACAGGAACATCACTGCCATTCTTGGTaGAGTCGCCATAATCGCCCCCAAGTCTGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: KGSQQEHHCHSW*SRHNRPQVCPG
Trigger: CCCTGGACAGACTTGGGGGCGATTATGGCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTGAGAACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR CCA 72 bp TGGCTGATCCAAGGGAAAAAGAGACTTAGCCGCAGTTaGGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCA +
Preference number: 3 (lower is better)
Translates to: WLIQGKKRLSRS*VGKPECSEAVP
Trigger: TGGTACTGCCTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTGGATCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR CCA 72 bp CTGGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTTaGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTA +
Preference number: 3 (lower is better)
Translates to: LGRKPVHACVYP*LCFVLVISGFL
Trigger: TAAGAAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CAA 90 bp CGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCACACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: RFLRKVPCQSSKFRLADPHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...TGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CAA 90 bp GCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTTGCGTGTACCCTTGGTaGTGTTTTGTCCTGGTTATC +
Preference number: 3 (lower is better)
Translates to: ALLGSFISYCSWSNFLSPCVYPW*CFVLVI
Trigger: GATAACCAGGACAAAACACAACCAAGGGTACACGCA...AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 72 bp AAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCTTACCCATCTTGCTTC +
Preference number: 3 (lower is better)
Translates to: KALLGSFISYCS*SNFLSPYPSCF
Trigger: GAAGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR CCA 72 bp CTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTaGGGAAGACAAGATGTGGCAGAAGCGTTCACAAAA +
Preference number: 3 (lower is better)
Translates to: LREPRRRRSDQF*GRQDVAEAFTK
Trigger: TTTTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR TCA 72 bp ACATGGAGCATACATAAACGGGCAAGATTCAGTCCCTaGCCGCAAGGCACTTACAGTCTAGTTGGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: TWSIHKRARFSP*PQGTYSLVGKG
Trigger: TCCCTTCCCAACTAGACTGTAAGTGCCTTGCGGTCAGGGACTGAATCTTGCCCGTTTATGTATGCTCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CAA 90 bp CGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCACATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: RFLRKVPCQSSKFRLADPHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...TGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CAA 90 bp CTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAACATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: LRKVPCQSSKFRLADPREHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...TTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR-3UTR CAA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGACCCTTGGTTGTGTTTaGTCCTGGTTATCAGCGGTT +
Preference number: 3 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWTLGCV*SWLSAV
Trigger: AACCGCTGATAACCAGGACAAAACACAACCAAGGGT...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR-3UTR CAA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATTGCCTGCGTGTACCCTaGGTTGTGTTTTGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADCLRVP*VVFCPG
Trigger: ACCAGGACAAAACACAACCAAGGGTACACGCAGGCA...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR GCA 72 bp ACTTTGAAGGGTAAAGGTTCTCAACAGGAACATCACTaGCATTCTTGGTGCAGTCGCCATAATCGCCCCCAA +
Preference number: 3 (lower is better)
Translates to: TLKGKGSQQEHH*HSWCSRHNRPQ
Trigger: TTGGGGGCGATTATGGCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTGAGAACCTTTACCCTTCAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338748.9
3UTR-3UTR CAA 90 bp AGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCTGCGTGTACCCTTGGTaGTGTTTTGTCCTGGTTATC +
Preference number: 3 (lower is better)
Translates to: SGFLGKFLVKAPSFAWLICVYPW*CFVLVI
Trigger: GATAACCAGGACAAAACACAACCAAGGGTACACGCA...GATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CCA 72 bp TTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTaGCTGATCCAAGGGAAAAAGAGACTTAGCCGCAGT +
Preference number: 3 (lower is better)
Translates to: LGKFLVKAPSFA*LIQGKKRLSRS
Trigger: ACTGCGGCTAAGTCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
3UTR GCA 72 bp TTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTaGAACAGCAACACTCCAGCAGATGTTATAGTGTGC +
Preference number: 3 (lower is better)
Translates to: LGRETQMYKKVW*NSNTPADVIVC
Trigger: GCACACTATAACATCTGCTGGAGTGTTGCTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCTCCTCCGCCGTGGGCTaGTGGGGCGCCGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: ASPPHINGSLGGSERKPCSSAVG*WGAAGS
Trigger: CGAACCTGCGGCGCCCCAGCAGCCCACGGCGGAGGA...GCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCGCAGGTCGCGACGGCTaGGGGAGCCGGCCACGAGAG +
Preference number: 4 (lower is better)
Translates to: GGSERKPCTSFNLARASTAGRDG*GSRPRE
Trigger: CTCTCGTGGCCGGCTCCCGCAGCCGTCGCGACCTGC...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCCCCTGCAGAGCCCCCTaGAGATGGGCGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SPAHPSILPGPAPSHQRSPCRAP*RWAGAQ
Trigger: CTGGGCCCCCGCCCATCTCCAGGGGGCTCTGCAGGG...GCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCGGCGCCTGTCGTCTGTaGGGCGCTCTCCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GGSERKPCTSFNLARASTGACRL*GALPLA
Trigger: GGCGAGGGGGAGAGCGCCCCACAGACGACAGGCGCC...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR TCA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCGTGGAGGCTACCTCCTaGGCACCCCTGCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: AALRGSPAHPSILPGPAPVEATS*APLPPR
Trigger: CCGAGGGGGCAGGGGTGCTCAGGAGGTAGCCTCCAC...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTCCTCCGCCGTGGGCTaGTGGGGCGCCGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: LASPPHINGSLGGSERKPSSAVG*WGAAGS
Trigger: CGAACCTGCGGCGCCCCAGCAGCCCACGGCGGAGGA...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp CTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGGCAGGTCGCGACGGCTaGGGGAGCCGGCCACGAGAG +
Preference number: 4 (lower is better)
Translates to: LQSCQGQHPPTRGASALVAGRDG*GSRPRE
Trigger: CTCTCGTGGCCGGCTCCCGCAGCCGTCGCGACCTGC...CACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGGCGCTGCAAGGGGTaGGGCAGAGTCCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSPAHPSILPGPAPSHQRRRCKG*GRVPRR
Trigger: CCTGCGGGGGACTCTGCCGCACCCCTTGCAGCGCCT...CCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCAGAGCCCCCTGGAGATaGGCGGGGGCCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GSERKPCTSFNLARASTLRAPWR*AGAQGG
Trigger: GCCACCCTGGGCCCCCGCCCATCTCCAGGGGGCTCT...GAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGAGAGCCCCCTGGAGATaGGCGGGGGCCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NLARASTLPPEEHLPWCERAPWR*AGAQGG
Trigger: GCCACCCTGGGCCCCCGCCCATCTCCAGGGGGCTCT...CTCACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGAGCCCCCTGGAGATaGGCGGGGGCCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RGSPAHPSILPGPAPSHQRAPWR*AGAQGG
Trigger: GCCACCCTGGGCCCCCGCCCATCTCCAGGGGGCTCT...CTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCCCTGCAGAGCCCCCTaGAGATGGGCGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHPCRAP*RWAGAQ
Trigger: CTGGGCCCCCGCCCATCTCCAGGGGGCTCTGCAGGG...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGAAGCCTGGGCGGGGCTaGGGTCGTCGTGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFNLARASTLPPEEHLPWKPGRG*GRRGAS
Trigger: GGAGGCGCCACGACGACCCCAGCCCCGCCCAGGCTT...CCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR GCA 90 bp GGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTCCTCCGCCGTGGGCTaGTGGGGCGCCGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: GVQGWSQGTSGQLHQLLFSSAVG*WGAAGS
Trigger: CGAACCTGCGGCGCCCCAGCAGCCCACGGCGGAGGA...GAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CCA 90 bp TTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTAGAGCCCCCTGGAGATaGGCGGGGGCCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: FNLARASTLPPEEHLPWCRAPWR*AGAQGG
Trigger: GCCACCCTGGGCCCCCGCCCATCTCCAGGGGGCTCT...ACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCGTCGTGGCGCCTCCTaGCCGTCCGGCGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRRRGAS*PSGGEG
Trigger: CCCTTCACCGCCGGACGGCCAGGAGGCGCCACGACG...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR TCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTGTGGAGGCTACCTCCTaGGCACCCCTGCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPVEATS*APLPPR
Trigger: CCGAGGGGGCAGGGGTGCTCAGGAGGTAGCCTCCAC...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCAGTGGAGGCTACCTCCTaGGCACCCCTGCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SERKPCTSFNLARASTLPVEATS*APLPPR
Trigger: CCGAGGGGGCAGGGGTGCTCAGGAGGTAGCCTCCAC...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GTTGGGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGGTGGAGGCTACCTCCTaGGCACCCCTGCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: VGWGNQSVQRQYQGVQGWVEATS*APLPPR
Trigger: CCGAGGGGGCAGGGGTGCTCAGGAGGTAGCCTCCAC...CCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCCCCTGGAACCCGAGTaGGGCTGCCCCTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRPLEPE*GCPWPC
Trigger: GCATGGCCAGGGGCAGCCTCACTCGGGTTCCAGGGG...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR GCA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCTCGGGGCCCAGCCCCTaGTCCTCACGCTTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GGETRVFRGSTKGYRAGASGPSP*SSRLFP
Trigger: GGGGAACAAGCGTGAGGAGCAGGGGCTGGGCCCCGA...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCATCCTCCGCCGTGGGCTaGTGGGGCGCCGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSSSAVG*WGAAGS
Trigger: CGAACCTGCGGCGCCCCAGCAGCCCACGGCGGAGGA...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGAGGCGCTGCAAGGGGTaGGGCAGAGTCCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGRRCKG*GRVPRR
Trigger: CCTGCGGGGGACTCTGCCGCACCCCTTGCAGCGCCT...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGAGGCGCTGCAAGGGGTaGGGCAGAGTCCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSLGGSERKPCTSFNLARRRCKG*GRVPRR
Trigger: CCTGCGGGGGACTCTGCCGCACCCCTTGCAGCGCCT...CCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGGGGACCCTCAGGCGCTaGAAGGGGTGCGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVGTLRR*KGCGRV
Trigger: GACTCTGCCGCACCCCTTGCAGCGCCTGAGGGTCCC...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TGGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGACAGGTGCAGCGGCCTaGCTGGGGAGCCCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: WAGNPCMPACTLGCVLSWTGAAA*LGSPPA
Trigger: AGCGGGCGGGCTCCCCAGCCAGGCCGCTGCACCTGT...CCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228916.7
CDS-3UTR CCA 90 bp CTGAGCACCCCTGCCCCCTCGGCCTGGAGACCAGTATCGGCTTCGGAACCTTCGGGAGCAGGGCCTGGCTaGGACAAGGACAGAGACATG +
Preference number: 4 (lower is better)
Translates to: LSTPAPSAWRPVSASEPSGAGPG*DKDRDM
Trigger: CATGTCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCC...CGAAGGTTCCGAAGCCGATACTGGTCTCCAGGCCGAGGGGGCAGGGGTGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CCA 90 bp TCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTCAGGCCAGGGGCCCTaGAGCGAGTGTCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SFNLARASTLPPEEHLPWSGQGP*SECLAP
Trigger: AGGGGCCAGACACTCGCTCCAGGGCCCCTGGCCTGA...CCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540037.5
3UTR CAA 72 bp GAGGAGCCGAACCACAGGCTCCACTGGCTGCCCAGGTaGGACAGGAGGGTGACCATCGTGACAGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: EEPNHRLHWLPR*DRRVTIVTEGD
Trigger: GTCTCCCTCTGTCACGATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR TCA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCCTGAGCTCTGGGCCCTaGGTGCCCTCTCCCATCACC +
Preference number: 4 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGLSSGP*VPSPIT
Trigger: GGTGATGGGAGAGGGCACTCAGGGCCCAGAGCTCAG...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR GCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATTCCTCCGCCGTGGGCTaGTGGGGCGCCGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: HINGSLGGSERKPCTSFNSSAVG*WGAAGS
Trigger: CGAACCTGCGGCGCCCCAGCAGCCCACGGCGGAGGA...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCGGGACCCTCAGGCGCTaGAAGGGGTGCGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GVQGWSQGTSGQLHQLLFGTLRR*KGCGRV
Trigger: GACTCTGCCGCACCCCTTGCAGCGCCTGAGGGTCCC...GAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp AGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCACAGGCTCCACTGGCTaGCCAGGTTGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SPAHPSILPGPAPSHQRSTGSTG*PGWTGG
Trigger: CCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGT...GCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGGAACTGGCCCCTaGAGAGCCCCCTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: EEALHILQSCQGQHPPTRGGTGP*RAPWRW
Trigger: CCATCTCCAGGGGGCTCTGCAGGGGCCAGTTCCTCC...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCGGAGGAACTGGCCCCTaGAGAGCCCCCTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGGGTGP*RAPWRW
Trigger: CCATCTCCAGGGGGCTCTGCAGGGGCCAGTTCCTCC...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCGCTCTGGGCCCTGAGTaGCCTCTCCCATCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LASPPHINGSLGGSERKPALGPE*PLPSPL
Trigger: CAGGGGTGATGGGAGAGGGCACTCAGGGCCCAGAGC...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CCA 90 bp GGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCTGCCCCCTCGGCCTaGAGACCAGTATCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: GSERKPCTSFNLARASTLPAPSA*RPVSAS
Trigger: CGAAGCCGATACTGGTCTCCAGGCCGAGGGGGCAGG...GAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCAGGGGCTGTCAAGGCTaGAGAGGGAGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PPHINGSLGGSERKPCTSRGCQG*RGSRAW
Trigger: CCAGGCCCTGCTCCCTCTCCAGCCTTGACAGCCCCT...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCAGGGGCTGTCAAGGCTaGAGAGGGAGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LASPPHINGSLGGSERKPRGCQG*RGSRAW
Trigger: CCAGGCCCTGCTCCCTCTCCAGCCTTGACAGCCCCT...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCACCCTGCAGAGCCCCCTaGAGATGGGCGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: REPRRRRSDQFWGRQDVAPCRAP*RWAGAQ
Trigger: CTGGGCCCCCGCCCATCTCCAGGGGGCTCTGCAGGG...TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCCTGCAGAGCCCCCTaGAGATGGGCGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: STAVWAALRGSPAHPSILPCRAP*RWAGAQ
Trigger: CTGGGCCCCCGCCCATCTCCAGGGGGCTCTGCAGGG...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGGACAGGTGGAGGAACTaGCCCCTGCAGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: NLARASTLPPEEHLPWCEDRWRN*PLQSPL
Trigger: CAGGGGGCTCTGCAGGGGCCAGTTCCTCCACCTGTC...CTCACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCCCCCAGAGGACAGGTaGAGGAACTGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHPPEDR*RNWPLQ
Trigger: CTGCAGGGGCCAGTTCCTCCACCTGTCCTCTGGGGG...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGCCCCCAGAGGACAGGTaGAGGAACTGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RGSPAHPSILPGPAPSHQPPEDR*RNWPLQ
Trigger: CTGCAGGGGCCAGTTCCTCCACCTGTCCTCTGGGGG...CTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp ACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAGGCCAGTCGGGGGCTaGCTTAAGCCGTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: THLASPPHINGSLGGSERRPVGG*LKPSLG
Trigger: GCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCT...CCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCTACTGGAGAGCAGTGTaGCCAGGCCAGTCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASPPHINGSLGGSERKPCYWRAV*PGQSGA
Trigger: AGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTA...GCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCGTGGAGGCTACCTCCTaGGCACCCCTGCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPVEATS*APLPPR
Trigger: CCGAGGGGGCAGGGGTGCTCAGGAGGTAGCCTCCAC...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGCGGGGCATGGCTCTGTaGGGGCACGGGTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLPILLPLHTSTAVWAALRGMAL*GHGYEA
Trigger: AGCCTCATACCCGTGCCCTCACAGAGCCATGCCCCG...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp TCCTGCCCGTGCACCATTACCCGGGCCCCAGTCACTGTGGACAGCAGGGGAATGGCAGAGCCACAGCACTaGCCAGAAGGCCGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SCPCTITRAPVTVDSRGMAEPQH*PEGRLH
Trigger: ATGAAGACGGCCTTCTGGGCAGTGCTGTGGCTCTGC...CATTCCCCTGCTGTCCACAGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR GCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAGGGACCCTCAGGCGCTaGAAGGGGTGCGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSGTLRR*KGCGRV
Trigger: GACTCTGCCGCACCCCTTGCAGCGCCTGAGGGTCCC...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVGSSCP*TITRAP
Trigger: TGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACC...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EEALHILQSCQGQHPPTRGSSCP*TITRAP
Trigger: TGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACC...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LGGSERKPCTSFNLARASGSSCP*TITRAP
Trigger: TGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACC...GCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACACAGGCTCCACTGGCTaGCCAGGTTGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHTGSTG*PGWTGG
Trigger: CCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGT...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCAGGGTCCTCATCTGTaGCCCGGGAGGCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGQGPHL*PGRPVH
Trigger: ATGGACCGGCCTCCCGGGGCACAGATGAGGACCCTG...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR CCA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACTGTTGTCCCGCAAGCTaGAGGCCACGCTACGGGCTC +
Preference number: 4 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHCCPAS*RPRYGL
Trigger: GAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACA...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCAACCACAGGCTCCACTaGCTGCCCAGGTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: AALRGSPAHPSILPGPAPNHRLH*LPRLDR
Trigger: CCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTT...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GTTGGGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGCCTGCCCCCTCGGCCTaGAGACCAGTATCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: VGWGNQSVQRQYQGVQGWPAPSA*RPVSAS
Trigger: CGAAGCCGATACTGGTCTCCAGGCCGAGGGGGCAGG...CCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTCCTGCCCCCTCGGCCTaGAGACCAGTATCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: FNLARASTLPPEEHLPWCPAPSA*RPVSAS
Trigger: CGAAGCCGATACTGGTCTCCAGGCCGAGGGGGCAGG...ACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTCCTGCCCCCTCGGCCTaGAGACCAGTATCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPPAPSA*RPVSAS
Trigger: CGAAGCCGATACTGGTCTCCAGGCCGAGGGGGCAGG...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCTGCCCCCTCGGCCTaGAGACCAGTATCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: SERKPCTSFNLARASTLPPAPSA*RPVSAS
Trigger: CGAAGCCGATACTGGTCTCCAGGCCGAGGGGGCAGG...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGGGGAGGATGCCAGGGTaGAGGCTACCTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVGRMPG*RLPPEH
Trigger: GTGCTCAGGAGGTAGCCTCCACCCTGGCATCCTCCC...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGGGGAGGATGCCAGGGTaGAGGCTACCTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SFNLARASTLPPEEHLPWGRMPG*RLPPEH
Trigger: GTGCTCAGGAGGTAGCCTCCACCCTGGCATCCTCCC...CCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCAGGGGCTGTCAAGGCTaGAGAGGGAGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GVQGWSQGTSGQLHQLLFRGCQG*RGSRAW
Trigger: CCAGGCCCTGCTCCCTCTCCAGCCTTGACAGCCCCT...GAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AGGCCGCAAGTTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTGCCCGTGAGAGCCCCCTGGAGATaGGCGGGGGCCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPQVKATIIHKGRFILPVRAPWR*AGAQGG
Trigger: GCCACCCTGGGCCCCCGCCCATCTCCAGGGGGCTCT...CACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAACTTGCGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR CCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGGACAGGTGGAGGAACTaGCCCCTGCAGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGDRWRN*PLQSPL
Trigger: CAGGGGGCTCTGCAGGGGCCAGTTCCTCCACCTGTC...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGGACAGGTGGAGGAACTaGCCCCTGCAGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRDRWRN*PLQSPL
Trigger: CAGGGGGCTCTGCAGGGGCCAGTTCCTCCACCTGTC...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCACCCCCAGAGGACAGGTaGAGGAACTGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VGKPECSEAVPRGTGLEPPPEDR*RNWPLQ
Trigger: CTGCAGGGGCCAGTTCCTCCACCTGTCCTCTGGGGG...TGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGCCCCCAGAGGACAGGTaGAGGAACTGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLPILLPLHTSTAVWAALPPEDR*RNWPLQ
Trigger: CTGCAGGGGCCAGTTCCTCCACCTGTCCTCTGGGGG...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GAGGAGCCGAACCACAGGCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EEPNHRLHWLPRLDRRVTTSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...GGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CCA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGATACTGGAGAGCAGTGTaGCCAGGCCAGTCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: EEALHILQSCQGQHPPTRYWRAV*PGQSGA
Trigger: AGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTA...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCAAGAGGTGCCGGGGCATaGCTCTGTGAGGGCACGGGT +
Preference number: 4 (lower is better)
Translates to: SERKPCTSFNLARASTLPRGAGA*LCEGTG
Trigger: ACCCGTGCCCTCACAGAGCCATGCCCCGGCACCTCT...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTAGAGGTGCCGGGGCATaGCTCTGTGAGGGCACGGGT +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPRGAGA*LCEGTG
Trigger: ACCCGTGCCCTCACAGAGCCATGCCCCGGCACCTCT...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp AGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGCTCCTCCACCTTTCCTaGAGCCAGCAGACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: RGSPAHPSILPGPAPSHQLLHLS*SQQTCG
Trigger: CCCGCAGGTCTGCTGGCTCCAGGAAAGGTGGAGGAG...CTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCACCTGGAGCGAGTGTCTaGCCCCTCCGGGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSPGASV*PLRGQG
Trigger: ACCCTGACCCCGGAGGGGCCAGACACTCGCTCCAGG...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540037.5
3UTR CAA 72 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: AALRGSPAHPSI*PGPAPSHQRSI
Trigger: GATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCGCTTGTTCCCCTCCATaGGACCTGGTATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGSERKPCTSFNLARASTACSPP*DLVWAA
Trigger: TGCAGCCCATACCAGGTCTCATGGAGGGGAACAAGC...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR TCA 90 bp GTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGAGAGCGTCTGCTCTGTaGTGCGGTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VQRQYQGVQGWSQGTSGQRASAL*CGPAPP
Trigger: TGGAGGAGCTGGACCGCATCACAGAGCAGACGCTCT...CTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp TCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGAGAGCGTCTGCTCTGTaGTGCGGTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SFNLARASTLPPEEHLPWRASAL*CGPAPP
Trigger: TGGAGGAGCTGGACCGCATCACAGAGCAGACGCTCT...CCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAAGAGCGTCTGCTCTGTaGTGCGGTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EEALHILQSCQGQHPPTRRASAL*CGPAPP
Trigger: TGGAGGAGCTGGACCGCATCACAGAGCAGACGCTCT...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCGCTTCCGGCACTTGGTaGAACAGCCCAGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GGETRVFRGSTKGYRAGAASGTW*NSPGGL
Trigger: CAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGC...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGCTTCCGGCACTTGGTaGAACAGCCCAGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: EEALHILQSCQGQHPPTRASGTW*NSPGGL
Trigger: CAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGC...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACGCTTCCGGCACTTGGTaGAACAGCCCAGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHASGTW*NSPGGL
Trigger: CAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGC...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGACACCGAGGGCCATCGTaGGTAACCAGCAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EEALHILQSCQGQHPPTRHRGPS*VTSREL
Trigger: CAGCTCTCTGCTGGTTACTCACGATGGCCCTCGGTG...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp TGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 4 (lower is better)
Translates to: WAALRGSPAHPSILPGPAQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...TGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 4 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 4 (lower is better)
Translates to: LASPPHINGSLGGSERKPQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCACGGGGCATGGCTCTGTaGGGGCACGGGTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSRGMAL*GHGYEA
Trigger: AGCCTCATACCCGTGCCCTCACAGAGCCATGCCCCG...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCAGACCTGGTATGGGCTaGAGAGGTCTAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GGSERKPCTSFNLARASTRPGMG*RGLGSC
Trigger: GCAGGACCCTAGACCTCTGCAGCCCATACCAGGTCT...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000543768.1
CDS-3UTR GCA 90 bp GAGCCGAACCACAGGCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCATCAGGTCAAAGAGCGTCTaGTCTGTGATGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EPNHRLHWLPRLDRRVTIRSKSV*SVMRSS
Trigger: GCTGGACCGCATCACAGAGCAGACGCTCTTTGACCT...GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR GCA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGGCAGGTCGCGACGGCTaGGGGAGCCGGCCACGAGAG +
Preference number: 4 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPEAGRDG*GSRPRE
Trigger: CTCTCGTGGCCGGCTCCCGCAGCCGTCGCGACCTGC...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGGCGCTGCAAGGGGTaGGGCAGAGTCCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AKALLGSFISYCSWSNFLRRCKG*GRVPRR
Trigger: CCTGCGGGGGACTCTGCCGCACCCCTTGCAGCGCCT...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp CAGTATCGGCTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGGGGACCCTCAGGCGCTaGAAGGGGTGCGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: QYRLRNLRSSMRNMMTSRGTLRR*KGCGRV
Trigger: GACTCTGCCGCACCCCTTGCAGCGCCTGAGGGTCCC...CCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAGCCGATACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR GCA 90 bp ACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: THLASPPHINGSLGGSERGSSCP*TITRAP
Trigger: TGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACC...CCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAGGAGGAACTGGCCCCTaGAGAGCCCCCTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSGGTGP*RAPWRW
Trigger: CCATCTCCAGGGGGCTCTGCAGGGGCCAGTTCCTCC...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GAGGAGCCGAACCACAGGCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCCACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: EEPNHRLHWLPRLDRRVTHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...GGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CCA 90 bp TTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCCCCTGGAGTGGACTGTaGAGGGCTAGAGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LGGSERKPCTSFNLARASPWSGL*RARVLL
Trigger: GAGCAGGACTCTAGCCCTCCACAGTCCACTCCAGGG...GCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGTGTTGTCCCGCAAGCTaGAGGCCACGCTACGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRCCPAS*RPRYGL
Trigger: GAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACA...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGAACCACAGGCTCCACTaGCTGCCCAGGTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: LQSCQGQHPPTRGASALVNHRLH*LPRLDR
Trigger: CCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTT...CACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCAACCACAGGCTCCACTaGCTGCCCAGGTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: LGGSERKPCTSFNLARASNHRLH*LPRLDR
Trigger: CCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTT...GCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCAACCACAGGCTCCACTaGCTGCCCAGGTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: PPHINGSLGGSERKPCTSNHRLH*LPRLDR
Trigger: CCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTT...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCGGGAGGATGCCAGGGTaGAGGCTACCTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GVQGWSQGTSGQLHQLLFGRMPG*RLPPEH
Trigger: GTGCTCAGGAGGTAGCCTCCACCCTGGCATCCTCCC...GAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCCAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LGGSERKPCTSFNLARASQGVQG*SQGTSG
Trigger: CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTG...GCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GACGAGCTCAGCCATCTCCACCACAGACAACACCGAGGAGCCGAACCACAGGCTCAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DELSHLHHRQHRGAEPQAQGVQG*SQGTSG
Trigger: CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTG...AGCCTGTGGTTCGGCTCCTCGGTGTTGTCTGTGGTGGAGATGGCTGAGCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CCA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGCTTAAGCCGTCGCTaGGCAGGAAACCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: EEALHILQSCQGQHPPTRGLSRR*AGNPCM
Trigger: CATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCC...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCGGTACCTGTAGGGATTaGGGGTGCAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GGSERKPCTSFNLARASTGTCRD*GCRWSL
Trigger: CAGTGACCATCTGCACCCTCAATCCCTACAGGTACC...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR TCA 90 bp GCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCGGTACCTGTAGGGATTaGGGGTGCAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ASPPHINGSLGGSERKPCGTCRD*GCRWSL
Trigger: CAGTGACCATCTGCACCCTCAATCCCTACAGGTACC...GCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR TCA 90 bp TGGCTGCCCAGGTTGGACAGGAGGGTGACCATCGTGACAGAGGGAGACTCAGAAAGAGCGTCTGCTCTGTaGTGCGGTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WLPRLDRRVTIVTEGDSERASAL*CGPAPP
Trigger: TGGAGGAGCTGGACCGCATCACAGAGCAGACGCTCT...TTCTGAGTCTCCCTCTGTCACGATGGTCACCCTCCTGTCCAACCTGGGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR TCA 90 bp GGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGAGCGGCAGGCGAAGATaGAGTTGCCCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLGGSERKPCTSFNLARSGRRR*SCPACP
Trigger: AGGACACGCTGGGCAACTTCATCTTCGCCTGCCGCT...CCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCTGGACAGCAGGGGAATaGAGTCATTCTGCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: GGSERKPCTSFNLARASTWTAGE*SHSALR
Trigger: GCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCA...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp AGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCTTTCCTTCCTCATGCTaGTGGAGGTCTCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: SPAHPSILPGPAPSHQRSFPSSC*WRSPRQ
Trigger: CTGGCGTGGAGACCTCCATCAGCATGAGGAAGGAAA...GCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCACAGCCCAGGTGGTCTaGGGAGAAGTCAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGETRVFRGSTKGYRAGATAQVV*GEVNLE
Trigger: CTCCAGGTTGACTTCTCCTCAGACCACCTGGGCTGT...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp TGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCAACAGCCCAGGTGGTCTaGGGAGAAGTCAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: WAALRGSPAHPSILPGPATAQVV*GEVNLE
Trigger: CTCCAGGTTGACTTCTCCTCAGACCACCTGGGCTGT...TGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp TACTTACCCGGGTCTGCTCTAGCCCTAGCCCTCGGGAGTCAGGGAAGGGGAATTCACCGAGGGCCATCGTaGGTAACCAGCAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: YLPGSALALALGSQGRGIHRGPS*VTSREL
Trigger: CAGCTCTCTGCTGGTTACTCACGATGGCCCTCGGTG...AATTCCCCTTCCCTGACTCCCGAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AALRGSPAHPSILPGPAPASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGCGGGGCATGGCTCTGTaGGGGCACGGGTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWRGMAL*GHGYEA
Trigger: AGCCTCATACCCGTGCCCTCACAGAGCCATGCCCCG...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCACTGGCCGTCCGGCGGTaGAGGGTAAACAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSLAVRR*RVNRCV
Trigger: GACACACCTGTTTACCCTTCACCGCCGGACGGCCAG...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR GCA 90 bp GGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGACATCATGCCAAAGGTaGAGAGCCACAGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: GSPAHPSILPGPAPSHQRTSCQR*RATALP
Trigger: GGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGT...CCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCAGGTCAAAGAGCGTCTaGTCTGTGATGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AALRGSPAHPSILPGPAPRSKSV*SVMRSS
Trigger: GCTGGACCGCATCACAGAGCAGACGCTCTTTGACCT...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCAGGTCAAAGAGCGTCTaGTCTGTGATGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGSERKPCTSFNLARASTRSKSV*SVMRSS
Trigger: GCTGGACCGCATCACAGAGCAGACGCTCTTTGACCT...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCAGCAGGTCGCGACGGCTaGGGGAGCCGGCCACGAGAG +
Preference number: 4 (lower is better)
Translates to: GEGGVINFGEDKMWQKRSAGRDG*GSRPRE
Trigger: CTCTCGTGGCCGGCTCCCGCAGCCGTCGCGACCTGC...TGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GGCCCCAGTCACTGTGGACAGCAGGGGAATGAAGTCATTCTGCTCTGCGCGCAGAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGG +
Preference number: 4 (lower is better)
Translates to: GPSHCGQQGNEVILLCAQKAGSS*PCTITR
Trigger: CCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTT...CTGCGCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCACAGTGACTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR GCA 90 bp AATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGG +
Preference number: 4 (lower is better)
Translates to: NLARASTLPPEEHLPWCEKAGSS*PCTITR
Trigger: CCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTT...CTCACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGCACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 4 (lower is better)
Translates to: LQSCQGQHPPTRGASALVHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...CACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 4 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGTTACTTACCCGGGTCTaGTCTAGCCCTAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVLLTRV*SSPSPR
Trigger: CCGAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTAA...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTTCATGCGGTTGTGCTaGGAGCACACCAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: SFNLARASTLPPEEHLPWFMRLC*EHTRRM
Trigger: CATCCGCCTGGTGTGCTCCCAGCACAACCGCATGAA...CCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CCA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGATTCATGCGGTTGTGCTaGGAGCACACCAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: EEALHILQSCQGQHPPTRFMRLC*EHTRRM
Trigger: CATCCGCCTGGTGTGCTCCCAGCACAACCGCATGAA...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CCA 90 bp AGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGTGTTGTCCCGCAAGCTaGAGGCCACGCTACGGGCTC +
Preference number: 4 (lower is better)
Translates to: RVFRGSTKGYRAGAKALLCCPAS*RPRYGL
Trigger: GAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACA...CAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGTCCTTCCAGTCCACCTaGGGGTTGTTGTCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: NLARASTLPPEEHLPWCESFQST*GLLSRK
Trigger: CTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGA...CTCACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGTGGTTGCAGGAGACCTaGTTGAAGCGGCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RKPCTSFNLARASTLPPEWLQET*LKRQAK
Trigger: CTTCGCCTGCCGCTTCAACCAGGTCTCCTGCAACCA...CTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CCA 90 bp GACGAGCTCAGCCATCTCCACCACAGACAACACCGAGGAGCCGAACCACAGGCTGCTGGTCACGCTGCATaGCTTCCGGCACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: DELSHLHHRQHRGAEPQAAGHAA*LPALGE
Trigger: TTCACCAAGTGCCGGAAGCCATGCAGCGTGACCAGC...AGCCTGTGGTTCGGCTCCTCGGTGTTGTCTGTGGTGGAGATGGCTGAGCTCGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR CCA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCGCTGGTCACGCTGCATaGCTTCCGGCACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LASPPHINGSLGGSERKPAGHAA*LPALGE
Trigger: TTCACCAAGTGCCGGAAGCCATGCAGCGTGACCAGC...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGCAGAGAGCTGGTAGCTaGTCACGCTGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RKPCTSFNLARASTLPPEQRAGS*SRCMAS
Trigger: GGAAGCCATGCAGCGTGACCAGCTACCAGCTCTCTG...CTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGCAGAGAGCTGGTAGCTaGTCACGCTGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SFNLARASTLPPEEHLPWQRAGS*SRCMAS
Trigger: GGAAGCCATGCAGCGTGACCAGCTACCAGCTCTCTG...CCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAACCACAGGCTCCACTaGCTGCCCAGGTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: VGKPECSEAVPRGTGLEPNHRLH*LPRLDR
Trigger: CCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTT...TGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TGGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGGGGAGGATGCCAGGGTaGAGGCTACCTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: WAGNPCMPACTLGCVLSWGRMPG*RLPPEH
Trigger: GTGCTCAGGAGGTAGCCTCCACCCTGGCATCCTCCC...CCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGACAAGGACAGAGACATaGGGTGGGGGCAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVTRTET*GGGRSG
Trigger: CCCACTTCTGCCCCCACCCCATGTCTCTGTCCTTGT...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGGGAGCAGGGCCTGGCTaGGACAAGGACAGAGACATG +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGGAGPG*DKDRDM
Trigger: CATGTCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCC...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTGGAGCAGGGCCTGGCTaGGACAAGGACAGAGACATG +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPGAGPG*DKDRDM
Trigger: CATGTCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCC...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCAAGAGGGAGCAGGGCCTaGCTGGGACAAGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: SERKPCTSFNLARASTLPRGSRA*LGQGQR
Trigger: TCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCCCTCT...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TACTTACCCGGGTCTGCTCTAGCCCTAGCCCTCGGGAGTCAGGGAAGGGGAATTAGAGGGAGCAGGGCCTaGCTGGGACAAGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: YLPGSALALALGSQGRGIRGSRA*LGQGQR
Trigger: TCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCCCTCT...AATTCCCCTTCCCTGACTCCCGAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGAGAGGGAGCAGGGCCTaGCTGGGACAAGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: GETRVFRGSTKGYRAGAKRGSRA*LGQGQR
Trigger: TCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCCCTCT...CTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGAGGGGCTGTCAAGGCTaGAGAGGGAGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGRGCQG*RGSRAW
Trigger: CCAGGCCCTGCTCCCTCTCCAGCCTTGACAGCCCCT...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAAGACAGGTGGAGGAACTaGCCCCTGCAGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQDRWRN*PLQSPL
Trigger: CAGGGGGCTCTGCAGGGGCCAGTTCCTCCACCTGTC...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGGCTTAAGCCGTCGCTaGGCAGGAAACCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: GETRVFRGSTKGYRAGAKGLSRR*AGNPCM
Trigger: CATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCC...CTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGGCTTAAGCCGTCGCTaGGCAGGAAACCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: GSLGGSERKPCTSFNLARGLSRR*AGNPCM
Trigger: CATGCACGGGTTTCCTGCCCAGCGACGGCTTAAGCC...CCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAAGAGGTGCCGGGGCATaGCTCTGTGAGGGCACGGGT +
Preference number: 4 (lower is better)
Translates to: REPRRRRSDQFWGRQDVARGAGA*LCEGTG
Trigger: ACCCGTGCCCTCACAGAGCCATGCCCCGGCACCTCT...TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGCAAAAGTGCCGGAGCTaGGCTTCCCTAGAACGGCCT +
Preference number: 4 (lower is better)
Translates to: LQSCQGQHPPTRGASALVQKCRS*ASLERP
Trigger: AGGCCGTTCTAGGGAAGCCCAGCTCCGGCACTTTTG...CACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGCTCTCCCATCACCCCTaGAACCCGAGTGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSELSHHP*NPSEAA
Trigger: GGCAGCCTCACTCGGGTTCCAGGGGTGATGGGAGAG...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR TCA 90 bp GGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCTTGTTCCCCTCCATaGGACCTGGTATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSLGGSERKPCTSFNLARACSPP*DLVWAA
Trigger: TGCAGCCCATACCAGGTCTCATGGAGGGGAACAAGC...CCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR TCA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCAGCTTGTTCCCCTCCATaGGACCTGGTATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SERKPCTSFNLARASTLPACSPP*DLVWAA
Trigger: TGCAGCCCATACCAGGTCTCATGGAGGGGAACAAGC...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR TCA 90 bp TTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGCTTGTTCCCCTCCATaGGACCTGGTATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FNLARASTLPPEEHLPWCACSPP*DLVWAA
Trigger: TGCAGCCCATACCAGGTCTCATGGAGGGGAACAAGC...ACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR TCA 90 bp TGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCAGGTACCTGTAGGGATTaGGGGTGCAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: WAALRGSPAHPSILPGPAGTCRD*GCRWSL
Trigger: CAGTGACCATCTGCACCCTCAATCCCTACAGGTACC...TGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR TCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGGGTACCTGTAGGGATTaGGGGTGCAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVGTCRD*GCRWSL
Trigger: CAGTGACCATCTGCACCCTCAATCCCTACAGGTACC...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR TCA 90 bp GTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGGGTACCTGTAGGGATTaGGGGTGCAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VQRQYQGVQGWSQGTSGQGTCRD*GCRWSL
Trigger: CAGTGACCATCTGCACCCTCAATCCCTACAGGTACC...CTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR TCA 90 bp AATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGGCCTCGACAGGATGTTaGTGTAGTGGAAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: NLARASTLPPEEHLPWCEASTGC*CSGSGT
Trigger: GGTACCGCTTCCACTACATCAACATCCTGTCGAGGC...CTCACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCGCCTCGACAGGATGTTaGTGTAGTGGAAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: LASPPHINGSLGGSERKPASTGC*CSGSGT
Trigger: GGTACCGCTTCCACTACATCAACATCCTGTCGAGGC...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp AGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCGGGACAGACCGTTGTTaGTTCCAGGCATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SPAHPSILPGPAPSHQRSGTDRC*FQAWKT
Trigger: TGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCC...GCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTGGACAGCAGGGGAATaGAGTCATTCTGCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: PPHINGSLGGSERKPCTSWTAGE*SHSALR
Trigger: GCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCA...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp AGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGCTTCCGGCACTTGGTaGAACAGCCCAGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: RVFRGSTKGYRAGAKALLASGTW*NSPGGL
Trigger: CAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGC...CAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSEQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GGAAACCCGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCCTCGGCCTTGGCGTaGCCGCGGTACCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GNPCMPACTLGCVLSWLSASALA*PRYPGH
Trigger: ATGACCTGGGTACCGCGGTCACGCCAAGGCCGAGGC...TGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR GCA 90 bp ACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAGACCTGGTATGGGCTaGAGAGGTCTAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: THLASPPHINGSLGGSERRPGMG*RGLGSC
Trigger: GCAGGACCCTAGACCTCTGCAGCCCATACCAGGTCT...CCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000543768.1
CDS-3UTR GCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAGTCTTCATGCGGTTGTaGTGGGAGCACACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSVFMRL*WEHTRR
Trigger: CCGCCTGGTGTGCTCCCAGCACAACCGCATGAAGAC...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCAGAAGGCCGTCTTCATaGGGTTGTGCTGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: GSERKPCTSFNLARASTLRRPSS*GCAGST
Trigger: TGTGCTCCCAGCACAACCGCATGAAGACGGCCTTCT...GAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCAGAGCCACAGCACTaGCCAGAAGGCCGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GSLGGSERKPCTSFNLARAEPQH*PEGRLH
Trigger: ATGAAGACGGCCTTCTGGGCAGTGCTGTGGCTCTGC...CCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCACATCATGCCAAAGGTaGAGAGCCACAGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: GGETRVFRGSTKGYRAGATSCQR*RATALP
Trigger: GGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGT...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGGGTGCAGATGGTCACTaGGGGGAAGACGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRGADGH*GEDELV
Trigger: GACAAGCTCGTCTTCCCCGCAGTGACCATCTGCACC...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCAGGTCAAAGAGCGTCTaGTCTGTGATGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPHINGSLGGSERKPCTSRSKSV*SVMRSS
Trigger: GCTGGACCGCATCACAGAGCAGACGCTCTTTGACCT...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GGAAACCCGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGGGACCCTCAGGCGCTaGAAGGGGTGCGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GNPCMPACTLGCVLSWLSGTLRR*KGCGRV
Trigger: GACTCTGCCGCACCCCTTGCAGCGCCTGAGGGTCCC...TGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCGAAGTCATTCTGCTCTaGGCGCAGCATCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LASPPHINGSLGGSERKPEVILL*AQHQGQ
Trigger: CTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTC...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACGAAGTCATTCTGCTCTaGGCGCAGCATCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHEVILL*AQHQGQ
Trigger: CTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTC...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGG +
Preference number: 4 (lower is better)
Translates to: GVQGWSQGTSGQLHQLLFKAGSS*PCTITR
Trigger: CCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTT...GAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp TTCATCCTGCCCGTGCACCATTACCCGGGCCCCAGTCACTGTGGACAGCAGGGGCAACAGGAACATCACTaGCATTCTTGGTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: FILPVHHYPGPSHCGQQGQQEHH*HSWCSR
Trigger: GCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTG...CCCCTGCTGTCCACAGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR GCA 90 bp CTTGGTGCAGTCGCCATAATCGCCCCCAAGTCTGTCCAGGGTTTCCTTCCTCATACAGGCTCCACTGGCTaGCCAGGTTGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LGAVAIIAPKSVQGFLPHTGSTG*PGWTGG
Trigger: CCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGT...ATGAGGAAGGAAACCCTGGACAGACTTGGGGGCGATTATGGCGACTGCACCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR GCA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGACAGGCTCCACTGGCTaGCCAGGTTGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGTGSTG*PGWTGG
Trigger: CCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGT...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGACAGGCTCCACTGGCTaGCCAGGTTGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: STAVWAALRGSPAHPSILTGSTG*PGWTGG
Trigger: CCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGT...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGGGAGGAACTGGCCCCTaGAGAGCCCCCTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LRNLRSSMRNMMTSRSKTGGTGP*RAPWRW
Trigger: CCATCTCCAGGGGGCTCTGCAGGGGCCAGTTCCTCC...CGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR GCA 90 bp GCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCCACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: ASPPHINGSLGGSERKPCHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...GCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGCACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 4 (lower is better)
Translates to: PLPILLPLHTSTAVWAALHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGATGGGCAGGAAACCCGTaGATGCCTGCGTGTACCCTT +
Preference number: 4 (lower is better)
Translates to: PILLPLHTSTAVWAALRGWAGNP*MPACTL
Trigger: AAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCA...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGTTACTTACCCGGGTCTaGTCTAGCCCTAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGLLTRV*SSPSPR
Trigger: CCGAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTAA...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp TTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGGAGCCCTGGGTCTaGCTTTACTTACCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: FNLARASTLPPEEHLPWCEEPWV*LYLPGS
Trigger: AGACCCGGGTAAGTAAAGGCAGACCCAGGGCTCCTC...ACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGAGTTGGGGCCAAAAGTaGCGGAGCTGGGCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGSWGQK*RSWASL
Trigger: TAGGGAAGCCCAGCTCCGGCACTTTTGGCCCCAACT...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR GCA 90 bp CGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGCCCATGTCCCACCCTaGGCCCACATTCTCCCACTC +
Preference number: 4 (lower is better)
Translates to: REPRRRRSDQFWGRQDVAAHVPP*AHILPL
Trigger: GAGTGGGAGAATGTGGGCGCAGGGTGGGACATGGGC...TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTCCCCTCCATGAGACCTaGTATGGGCTGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPPLHET*YGLQRS
Trigger: AGACCTCTGCAGCCCATACCAGGTCTCATGGAGGGG...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000543768.1
CDS-3UTR CCA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCCCCCTCCATGAGACCTaGTATGGGCTGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PHINGSLGGSERKPCTSFPLHET*YGLQRS
Trigger: AGACCTCTGCAGCCCATACCAGGTCTCATGGAGGGG...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000543768.1
CDS-3UTR CCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTTCATGCGGTTGTGCTaGGAGCACACCAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPFMRLC*EHTRRM
Trigger: CATCCGCCTGGTGTGCTCCCAGCACAACCGCATGAA...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CCA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCTTCATGCGGTTGTGCTaGGAGCACACCAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: PHINGSLGGSERKPCTSFFMRLC*EHTRRM
Trigger: CATCCGCCTGGTGTGCTCCCAGCACAACCGCATGAA...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCCTTCCAGTCCACCTaGGGGTTGTTGTCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPSFQST*GLLSRK
Trigger: CTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGA...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCTCCTTCCAGTCCACCTaGGGGTTGTTGTCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: PHINGSLGGSERKPCTSFSFQST*GLLSRK
Trigger: CTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGA...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACGGATGGCAGAGTCTCTaGCAGCCTCGACAGGATGTT +
Preference number: 4 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHGWQSL*QPRQDV
Trigger: AACATCCTGTCGAGGCTGCCAGAGACTCTGCCATCC...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCGGATGGCAGAGTCTCTaGCAGCCTCGACAGGATGTT +
Preference number: 4 (lower is better)
Translates to: PPHINGSLGGSERKPCTSGWQSL*QPRQDV
Trigger: AACATCCTGTCGAGGCTGCCAGAGACTCTGCCATCC...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGGGATGGCAGAGTCTCTaGCAGCCTCGACAGGATGTT +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVGWQSL*QPRQDV
Trigger: AACATCCTGTCGAGGCTGCCAGAGACTCTGCCATCC...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGGGATGGCAGAGTCTCTaGCAGCCTCGACAGGATGTT +
Preference number: 4 (lower is better)
Translates to: LQSCQGQHPPTRGASALVGWQSL*QPRQDV
Trigger: AACATCCTGTCGAGGCTGCCAGAGACTCTGCCATCC...CACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGATGGTTGCAGGAGACCTaGTTGAAGCGGCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PILLPLHTSTAVWAALRGWLQET*LKRQAK
Trigger: CTTCGCCTGCCGCTTCAACCAGGTCTCCTGCAACCA...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CCA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCGCTGGTCACGCTGCATaGCTTCCGGCACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: PHINGSLGGSERKPCTSFAGHAA*LPALGE
Trigger: TTCACCAAGTGCCGGAAGCCATGCAGCGTGACCAGC...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCCAGAGAGCTGGTAGCTaGTCACGCTGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GVQGWSQGTSGQLHQLLFQRAGS*SRCMAS
Trigger: GGAAGCCATGCAGCGTGACCAGCTACCAGCTCTCTG...GAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGATGGAAGACCCATTCCTaGGATGTCACCGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: EEALHILQSCQGQHPPTRWKTHS*DVTEGH
Trigger: ATGGCCCTCGGTGACATCCCAGGAATGGGTCTTCCA...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGACAAGGACAGAGACATaGGGTGGGGGCAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGTRTET*GGGRSG
Trigger: CCCACTTCTGCCCCCACCCCATGTCTCTGTCCTTGT...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGAGGGAGCAGGGCCTaGCTGGGACAAGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSERGSRA*LGQGQR
Trigger: TCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCCCTCT...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTCCCCCAGAGGACAGGTaGAGGAACTGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLPEPLPILLPLHTSTAVPPEDR*RNWPLQ
Trigger: CTGCAGGGGCCAGTTCCTCCACCTGTCCTCTGGGGG...AACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RKPCTSFNLARASTLPPETSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...CTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GAGGAGCCGAACCACAGGCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EEPNHRLHWLPRLDRRVTISYCS*SNFLSP
Trigger: AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGAT...GGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTTCGGCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CCA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTAGGCCAGTCGGGGGCTaGCTTAAGCCGTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFRPVGG*LKPSLG
Trigger: GCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCT...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGACATCTGTGCTACTaGAGAGCAGTGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVRHLCY*RAVWPG
Trigger: GCCTGGCCACACTGCTCTCCAGTAGCACAGATGTCT...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCAAGGGGGCTTTTGGGTaGGGTTTCCCACCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GSERKPCTSFNLARASTLKGAFG*GFPPKF
Trigger: GAACTTGGGTGGGAAACCCCACCCAAAAGCCCCCTT...GAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCAAGGCTAGAGGAGCCCTaGGTCTGCCTTTACTTACCC +
Preference number: 4 (lower is better)
Translates to: WAALRGSPAHPSILPGPARLEEP*VCLYLP
Trigger: GGGTAAGTAAAGGCAGACCCAGGGCTCCTCTAGCCT...TGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCAGACCTGCGGGAGTTaGGGCCAAAAGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: STAVWAALRGSPAHPSILQTCGS*GQKCRS
Trigger: GCTCCGGCACTTTTGGCCCCAACTCCCGCAGGTCTG...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATAGCCCCGGAGTGGATTaGGGAGAGCAAGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HINGSLGGSERKPCTSFNSPGVD*GEQGSG
Trigger: CCCTGACCCTTGCTCTCCCCAATCCACTCCGGGGCT...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR TCA 90 bp CGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAAGAGCGTCTGCTCTGTaGTGCGGTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: REPRRRRSDQFWGRQDVARASAL*CGPAPP
Trigger: TGGAGGAGCTGGACCGCATCACAGAGCAGACGCTCT...TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTGCCTCGACAGGATGTTaGTGTAGTGGAAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPASTGC*CSGSGT
Trigger: GGTACCGCTTCCACTACATCAACATCCTGTCGAGGC...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCGCCTCGACAGGATGTTaGTGTAGTGGAAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: PHINGSLGGSERKPCTSFASTGC*CSGSGT
Trigger: GGTACCGCTTCCACTACATCAACATCCTGTCGAGGC...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GCCTGGAGACCAGTATCGGCTTCGGAACCTTCGGAGCAGCATGAGGAACATGATAGCGGCAGGCGAAGATaGAGTTGCCCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: AWRPVSASEPSEQHEEHDSGRRR*SCPACP
Trigger: AGGACACGCTGGGCAACTTCATCTTCGCCTGCCGCT...ATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAGCCGATACTGGTCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396966.6
CDS-3UTR TCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCGGGACAGACCGTTGTTaGTTCCAGGCATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PPHINGSLGGSERKPCTSGTDRC*FQAWKT
Trigger: TGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCC...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCGGGACAGACCGTTGTTaGTTCCAGGCATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GSERKPCTSFNLARASTLGTDRC*FQAWKT
Trigger: TGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCC...GAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGTGGACAGCAGGGGAATaGAGTCATTCTGCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRWTAGE*SHSALR
Trigger: GCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCA...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp AGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGTTTCCTTCCTCATGCTaGTGGAGGTCTCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: SVQRQYQGVQGWSQGTSGFPSSC*WRSPRQ
Trigger: CTGGCGTGGAGACCTCCATCAGCATGAGGAAGGAAA...CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp GTTGGGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGCACAGCCACACTCCTTaGTCATGCTCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VGWGNQSVQRQYQGVQGWHSHTP*SCSPGS
Trigger: GCTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTG...CCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp CTTGGTGCAGTCGCCATAATCGCCCCCAAGTCTGTCCAGGGTTTCCTTCCTCATCACCGAGGGCCATCGTaGGTAACCAGCAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LGAVAIIAPKSVQGFLPHHRGPS*VTSREL
Trigger: CAGCTCTCTGCTGGTTACTCACGATGGCCCTCGGTG...ATGAGGAAGGAAACCCTGGACAGACTTGGGGGCGATTATGGCGACTGCACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR TCA 90 bp GGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGCACCGAGGGCCATCGTaGGTAACCAGCAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSPGEGGVINFGEDKMWQHRGPS*VTSREL
Trigger: CAGCTCTCTGCTGGTTACTCACGATGGCCCTCGGTG...CTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGACAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp AGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGCTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: RKPCTSFNLARASTLPPELGATS*ALTHLA
Trigger: AGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAG...CTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGCTGTGGACTGTTTATTaGAGGAGAGAGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LQSCQGQHPPTRGASALVLWTVY*RREAGG
Trigger: GCCTCCTGCCTCTCTCCTTCAATAAACAGTCCACAG...CACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR GCA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAGAAGGCCGTCTTCATaGGGTTGTGCTGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: PHINGSLGGSERKPCTSFRRPSS*GCAGST
Trigger: TGTGCTCCCAGCACAACCGCATGAAGACGGCCTTCT...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAAGGCCGTCTTCATaGGGTTGTGCTGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: PLPILLPLHTSTAVWAALRRPSS*GCAGST
Trigger: TGTGCTCCCAGCACAACCGCATGAAGACGGCCTTCT...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATGCAGGTCGCGACGGCTaGGGGAGCCGGCCACGAGAG +
Preference number: 4 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADAGRDG*GSRPRE
Trigger: CTCTCGTGGCCGGCTCCCGCAGCCGTCGCGACCTGC...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCAGAAGTCATTCTGCTCTaGGCGCAGCATCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SERKPCTSFNLARASTLPEVILL*AQHQGQ
Trigger: CTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTC...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp AGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGAGCTCAGCCATCTCCGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSMRNMMTSRSKTSSAISGSSCP*TITRAP
Trigger: TGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACC...GGAGATGGCTGAGCTCGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR GCA 90 bp AGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCACTGCCATTCTTGGTaGAGTCGCCATAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: SVQRQYQGVQGWSQGTSGHCHSW*SRHNRP
Trigger: GGGGCGATTATGGCGACTGCACCAAGAATGGCAGTG...CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp ACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGCACTGCCATTCTTGGTaGAGTCGCCATAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: THLASPPHINGSLGGSERHCHSW*SRHNRP
Trigger: GGGGCGATTATGGCGACTGCACCAAGAATGGCAGTG...CCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTGGAGGAACTGGCCCCTaGAGAGCCCCCTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RACLRVPLVVFCPGYQRFGGTGP*RAPWRW
Trigger: CCATCTCCAGGGGGCTCTGCAGGGGCCAGTTCCTCC...AAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACCACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 4 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp GCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCATCGTGACAGAGGGAGAAGCCCTTACCCATCTTaGTTCCCCTCCACACATCAA +
Preference number: 4 (lower is better)
Translates to: APLAAQVGQEGDHRDRGRSPYPS*FPSTHQ
Trigger: TTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCT...TCTCCCTCTGTCACGATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR GCA 90 bp GTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGAAACCCGTGCATGCCTaGGTGTACCCTTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: VQRQYQGVQGWSQGTSGQKPVHA*VYPWLC
Trigger: ACACAACCAAGGGTACACGCAGGCATGCACGGGTTT...CTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGCAGGAAACCCGTGCATaGCTGCGTGTACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GSLGGSERKPCTSFNLARQETRA*LRVPLV
Trigger: AACCAAGGGTACACGCAGGCATGCACGGGTTTCCTG...CCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGTGGGCAGGAAACCCGTaGATGCCTGCGTGTACCCTT +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSEWAGNP*MPACTL
Trigger: AAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCA...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGGAGCAGACATCTGTaGTACTGGAGAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVRSRHL*YWRAVW
Trigger: CCACACTGCTCTCCAGTAGCACAGATGTCTGCTCCT...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp AGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCTCAGGGAAGGGGAATTaGCTAAGTAACAAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SPAHPSILPGPAPSHQRSSGKGN*LSNKGG
Trigger: GCCCCCTTTGTTACTTAGGCAATTCCCCTTCCCTGA...GCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGTTACTTACCCGGGTCTaGTCTAGCCCTAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSELLTRV*SSPSPR
Trigger: CCGAGGGCTAGGGCTAGAGCAGACCCGGGTAAGTAA...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp AGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGAGGAGCCCTGGGTCTaGCTTTACTTACCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: RVFRGSTKGYRAGAKALLEEPWV*LYLPGS
Trigger: AGACCCGGGTAAGTAAAGGCAGACCCAGGGCTCCTC...CAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAAGAACGGCCTCTCCTCTaGTTCCCTGATAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQERPLL*FPDRAT
Trigger: GGTGGCCCTATCAGGGAAGCAGAGGAGAGGCCGTTC...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CCA 90 bp AGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGAGCTCAGCCATCTCCTGTTGTCCCGCAAGCTaGAGGCCACGCTACGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSMRNMMTSRSKTSSAISCCPAS*RPRYGL
Trigger: GAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACA...GGAGATGGCTGAGCTCGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CCA 90 bp CTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGCAGTCCGATTTGTTCTaGTTGCACAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: LQSCQGQHPPTRGASALVQSDLF*LHSWKP
Trigger: CGGCTTCCAGCTGTGCAACCAGAACAAATCGGACTG...CACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGCAGTCCGATTTGTTCTaGTTGCACAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SFNLARASTLPPEEHLPWQSDLF*LHSWKP
Trigger: CGGCTTCCAGCTGTGCAACCAGAACAAATCGGACTG...CCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGCAGAGAGCTGGTAGCTaGTCACGCTGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RVFRGSTKGYRAGAKALLQRAGS*SRCMAS
Trigger: GGAAGCCATGCAGCGTGACCAGCTACCAGCTCTCTG...CAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTTGGAAGACCCATTCCTaGGATGTCACCGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: FNLARASTLPPEEHLPWCWKTHS*DVTEGH
Trigger: ATGGCCCTCGGTGACATCCCAGGAATGGGTCTTCCA...ACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCCTGCCCCCTCGGCCTaGAGACCAGTATCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: RACLRVPLVVFCPGYQRFPAPSA*RPVSAS
Trigger: CGAAGCCGATACTGGTCTCCAGGCCGAGGGGGCAGG...AAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CAGTATCGGCTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGGGAGCAGGGCCTGGCTaGGACAAGGACAGAGACATG +
Preference number: 4 (lower is better)
Translates to: QYRLRNLRSSMRNMMTSRGAGPG*DKDRDM
Trigger: CATGTCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCC...CCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAGCCGATACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CCA 90 bp CGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTAGGGGCTGTCAAGGCTaGAGAGGGAGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RACLRVPLVVFCPGYQRFRGCQG*RGSRAW
Trigger: CCAGGCCCTGCTCCCTCTCCAGCCTTGACAGCCCCT...AAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTGACAGGTGGAGGAACTaGCCCCTGCAGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: PGEGGVINFGEDKMWQKRDRWRN*PLQSPL
Trigger: CAGGGGGCTCTGCAGGGGCCAGTTCCTCCACCTGTC...ACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCGAGCCAAGGCACTTCTaGGCAGCTTCATCAGCTACT +
Preference number: 4 (lower is better)
Translates to: LASPPHINGSLGGSERKPEPRHF*AASSAT
Trigger: AGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTC...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: STAVWAALRGSPAHPSILQGVQG*SQGTSG
Trigger: CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTG...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCAGACTTAGCCGCAGTTaGGTGGGGAAACCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: GSERKPCTSFNLARASTLRLSRS*VGKPEC
Trigger: ACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCT...GAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGACTTAGCCGCAGTTaGGTGGGGAAACCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: VFRGSTKGYRAGAKALLGRLSRS*VGKPEC
Trigger: ACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCT...GCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGACATCTGTGCTACTaGAGAGCAGTGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VGKPECSEAVPRGTGLEPRHLCY*RAVWPG
Trigger: GCCTGGCCACACTGCTCTCCAGTAGCACAGATGTCT...TGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGAAGGGGGCTTTTGGGTaGGGTTTCCCACCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRKGAFG*GFPPKF
Trigger: GAACTTGGGTGGGAAACCCCACCCAAAAGCCCCCTT...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp AGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGAGACCCATTCCTGCATaGCTTCCGGCACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RKPCTSFNLARASTLPPERPIPA*LPALGE
Trigger: TTCACCAAGTGCCGGAAGCCATGCAGGAATGGGTCT...CTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396966.6
3UTR CAA 72 bp ACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTC +
Preference number: 4 (lower is better)
Translates to: THLASPPHINGS*GGSERKPCTSF
Trigger: GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGGGGACAGACCGTTGTTaGTTCCAGGCATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PLPILLPLHTSTAVWAALGTDRC*FQAWKT
Trigger: TGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCC...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGGGGACAGACCGTTGTTaGTTCCAGGCATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGGTDRC*FQAWKT
Trigger: TGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCC...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGTGGACAGCAGGGGAATaGAGTCATTCTGCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSEWTAGE*SHSALR
Trigger: GCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCA...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp TCCTGCCCGTGCACCATTACCCGGGCCCCAGTCACTGTGGACAGCAGGGGAATGCTGCTGTGTGTACTTTaGAGGGTAAAGGTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SCPCTITRAPVTVDSRGMLLCVL*RVKVLN
Trigger: GTTGAGAACCTTTACCCTTCAAAGTACACACAGCAG...CATTCCCCTGCTGTCCACAGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR TCA 90 bp AGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGCACAGCCACACTCCTTaGTCATGCTCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RVFRGSTKGYRAGAKALLHSHTP*SCSPGS
Trigger: GCTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTG...CAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGACAGCCCAGGTGGTCTaGGGAGAAGTCAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWTAQVV*GEVNLE
Trigger: CTCCAGGTTGACTTCTCCTCAGACCACCTGGGCTGT...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTGCTTCCGGCACTTGGTaGAACAGCCCAGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QLPEPLPILLPLHTSTAVASGTW*NSPGGL
Trigger: CAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGC...AACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTCTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPLGATS*ALTHLA
Trigger: AGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAG...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAACAGGTCATCCCGCCCTaGTCCCCGCAGGCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQQVIPP*SPQASV
Trigger: GACACTCGCCTGCGGGGATCAGGGCGGGATGACCTG...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR GCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGCAGAGCCACAGCACTaGCCAGAAGGCCGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRAEPQH*PEGRLH
Trigger: ATGAAGACGGCCTTCTGGGCAGTGCTGTGGCTCTGC...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp AGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATTGCCAGTACATCATaGCAAAGGTGCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: SPAHPSILPGPAPSHQRSIASTS*QRCRAT
Trigger: TGTGGCTCTGCACCTTTGGCATGATGTACTGGCAAT...GCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAAGGTCAAAGAGCGTCTaGTCTGTGATGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSRSKSV*SVMRSS
Trigger: GCTGGACCGCATCACAGAGCAGACGCTCTTTGACCT...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGCAGGTCGCGACGGCTaGGGGAGCCGGCCACGAGAG +
Preference number: 4 (lower is better)
Translates to: YQRFLRKVPCQSSKFRLAAGRDG*GSRPRE
Trigger: CTCTCGTGGCCGGCTCCCGCAGCCGTCGCGACCTGC...AGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp TGGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGGAAGTCATTCTGCTCTaGGCGCAGCATCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: WAGNPCMPACTLGCVLSWEVILL*AQHQGQ
Trigger: CTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTC...CCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACGAAGTCATTCTGCTCTaGGCGCAGCATCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHEVILL*AQHQGQ
Trigger: CTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTC...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGGAAGTCATTCTGCTCTaGGCGCAGCATCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSEEVILL*AQHQGQ
Trigger: CTGTCCCTGATGCTGCGCGCAGAGCAGAATGACTTC...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGG +
Preference number: 4 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGKAGSS*PCTITR
Trigger: CCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTT...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGG +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRKAGSS*PCTITR
Trigger: CCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTT...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCCAACAGGAACATCACTaGCATTCTTGGTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: LGGSERKPCTSFNLARASQQEHH*HSWCSR
Trigger: GCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTG...GCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAGGAACTGGCCCCTaGAGAGCCCCCTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWGGTGP*RAPWRW
Trigger: CCATCTCCAGGGGGCTCTGCAGGGGCCAGTTCCTCC...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCTCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: GGETRVFRGSTKGYRAGASERKP*TSFNLA
Trigger: GGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp AGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGTCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: RKPCTSFNLARASTLPPESERKP*TSFNLA
Trigger: GGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA...CTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp GTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGAGCCCTTACCCATCTTaGTTCCCCTCCACACATCAA +
Preference number: 4 (lower is better)
Translates to: VQRQYQGVQGWSQGTSGQSPYPS*FPSTHQ
Trigger: TTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCT...CTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGTCAGGGAAGGGGAATTaGCTAAGTAACAAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVSGKGN*LSNKGG
Trigger: GCCCCCTTTGTTACTTAGGCAATTCCCCTTCCCTGA...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCCTCCCTTTCTGTCTCTaGCCCCTTCCTTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GVQGWSQGTSGQLHQLLFLPFCL*PLPLVF
Trigger: GAAGACCAAAGGAAGGGGGCAGAGACAGAAAGGGAG...GAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCCCCTCCATGAGACCTaGTATGGGCTGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: HINGSLGGSERKPCTSFNPLHET*YGLQRS
Trigger: AGACCTCTGCAGCCCATACCAGGTCTCATGGAGGGG...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000543768.1
CDS-3UTR CCA 90 bp CGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTTGTTGTCCCGCAAGCTaGAGGCCACGCTACGGGCTC +
Preference number: 4 (lower is better)
Translates to: RACLRVPLVVFCPGYQRFCCPAS*RPRYGL
Trigger: GAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACA...AAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGTGTTGTCCCGCAAGCTaGAGGCCACGCTACGGGCTC +
Preference number: 4 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPECCPAS*RPRYGL
Trigger: GAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACA...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGTTCTGGTTGCACAGCTaGAAGCCGATCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SVQRQYQGVQGWSQGTSGFWLHS*KPIFQS
Trigger: GGACTGGAAGATCGGCTTCCAGCTGTGCAACCAGAA...CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCAGTCCGATTTGTTCTaGTTGCACAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGQSDLF*LHSWKP
Trigger: CGGCTTCCAGCTGTGCAACCAGAACAAATCGGACTG...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCCAGTCCGATTTGTTCTaGTTGCACAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PHINGSLGGSERKPCTSFQSDLF*LHSWKP
Trigger: CGGCTTCCAGCTGTGCAACCAGAACAAATCGGACTG...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGCATCACTGCCATTCTTaGTGCAGTCGCCATAATCGC +
Preference number: 4 (lower is better)
Translates to: RKPCTSFNLARASTLPPEHHCHS*CSRHNR
Trigger: GCGATTATGGCGACTGCACCAAGAATGGCAGTGATG...CTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCCATCACTGCCATTCTTaGTGCAGTCGCCATAATCGC +
Preference number: 4 (lower is better)
Translates to: GGETRVFRGSTKGYRAGAHHCHS*CSRHNR
Trigger: GCGATTATGGCGACTGCACCAAGAATGGCAGTGATG...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGACAGAGAGCTGGTAGCTaGTCACGCTGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRQRAGS*SRCMAS
Trigger: GGAAGCCATGCAGCGTGACCAGCTACCAGCTCTCTG...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGTGTCGCGATAGCATCTaGAAGACCCATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVCRDSI*KTHSWD
Trigger: ATCCCAGGAATGGGTCTTCCAGATGCTATCGCGACA...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGGGGAGGATGCCAGGGTaGAGGCTACCTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPEGRMPG*RLPPEH
Trigger: GTGCTCAGGAGGTAGCCTCCACCCTGGCATCCTCCC...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAACAAGGACAGAGACATaGGGTGGGGGCAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRTRTET*GGGRSG
Trigger: CCCACTTCTGCCCCCACCCCATGTCTCTGTCCTTGT...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGAGGGAGCAGGGCCTaGCTGGGACAAGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: AKALLGSFISYCSWSNFLRGSRA*LGQGQR
Trigger: TCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCCCTCT...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAGAGCCCCCTGGAGATaGGCGGGGGCCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFCPGYQRFLRKVPCQSSRAPWR*AGAQGG
Trigger: GCCACCCTGGGCCCCCGCCCATCTCCAGGGGGCTCT...GGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGCCCTGCAGAGCCCCCTaGAGATGGGCGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KVPCQSSKFRLADPREKEPCRAP*RWAGAQ
Trigger: CTGGGCCCCCGCCCATCTCCAGGGGGCTCTGCAGGG...CTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GGSERKPCTSFNLARASTISYCS*SNFLSP
Trigger: AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGAT...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAGAGCCAAGGCACTTCTaGGCAGCTTCATCAGCTACT +
Preference number: 4 (lower is better)
Translates to: PILLPLHTSTAVWAALRGEPRHF*AASSAT
Trigger: AGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTC...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAAAGGCCAGTCGGGGGCTaGCTTAAGCCGTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQRPVGG*LKPSLG
Trigger: GCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCT...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGCTAGAGGAGCCCTaGGTCTGCCTTTACTTACCC +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSERLEEP*VCLYLP
Trigger: GGGTAAGTAAAGGCAGACCCAGGGCTCCTCTAGCCT...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCTGTCGCGATAGCATCTaGAAGACCCATTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: GGETRVFRGSTKGYRAGACRDSI*KTHSCM
Trigger: CATGCAGGAATGGGTCTTCCAGATGCTATCGCGACA...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396966.6
CDS-3UTR CCA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGCAGGCGAGTGTCGGTaGCCTTTCGGCTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFAGECR*PFGLSA
Trigger: GGCACTCAAGCCGAAAGGCCACCGACACTCGCCTGC...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR TCA 90 bp CAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGGAAACCAGAGTGTTCAGAGAGAGCGTCTGCTCTGTaGTGCGGTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QGKKRLSRSWVGKPECSERASAL*CGPAPP
Trigger: TGGAGGAGCTGGACCGCATCACAGAGCAGACGCTCT...CTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACGGGACAGACCGTTGTTaGTTCCAGGCATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHGTDRC*FQAWKT
Trigger: TGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCC...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp GGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGTGGACAGCAGGGGAATaGAGTCATTCTGCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: GSPGEGGVINFGEDKMWQWTAGE*SHSALR
Trigger: GCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCA...CTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCACAGCCACACTCCTTaGTCATGCTCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGHSHTP*SCSPGS
Trigger: GCTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTG...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp TCGGAGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGAGCTCAGCCATACAGCCCAGGTGGTCTaGGGAGAAGTCAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: SEQHEEHDDQQVKDELSHTAQVV*GEVNLE
Trigger: CTCCAGGTTGACTTCTCCTCAGACCACCTGGGCTGT...ATGGCTGAGCTCGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR TCA 90 bp TATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGTGGAGGCTACCTCCTaGGCACCCCTGCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: YQRFLRKVPCQSSKFRLAVEATS*APLPPR
Trigger: CCGAGGGGGCAGGGGTGCTCAGGAGGTAGCCTCCAC...AGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACCTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHLGATS*ALTHLA
Trigger: AGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAG...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCACTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSLGATS*ALTHLA
Trigger: AGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAG...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp GGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGGGGAAACTTTCAGGCTaGGGAAATATCTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GSPAHPSILPGPAPSHQRGKLSG*GNISSR
Trigger: TCTGCTTGAGATATTTCCTCAGCCTGAAAGTTTCCC...CCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCAGAAGGCCGTCTTCATaGGGTTGTGCTGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPRRPSS*GCAGST
Trigger: TGTGCTCCCAGCACAACCGCATGAAGACGGCCTTCT...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAAGAAGGCCGTCTTCATaGGGTTGTGCTGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRRRPSS*GCAGST
Trigger: TGTGCTCCCAGCACAACCGCATGAAGACGGCCTTCT...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp CTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAGCCACAGCACTaGCCAGAAGGCCGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LREPRRRRSDQFWGRQDVAEPQH*PEGRLH
Trigger: ATGAAGACGGCCTTCTGGGCAGTGCTGTGGCTCTGC...CACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228916.7
ENST00000360168.7
CDS-3UTR GCA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGACATCATGCCAAAGGTaGAGAGCCACAGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWTSCQR*RATALP
Trigger: GGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGT...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGACATCATGCCAAAGGTaGAGAGCCACAGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGTSCQR*RATALP
Trigger: GGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGT...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp CTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGATTGCCAGTACATCATaGCAAAGGTGCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: LQSCQGQHPPTRGASALVIASTS*QRCRAT
Trigger: TGTGGCTCTGCACCTTTGGCATGATGTACTGGCAAT...CACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTGGTGCAGATGGTCACTaGGGGGAAGACGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ALLGSFISYCSWSNFLSPGADGH*GEDELV
Trigger: GACAAGCTCGTCTTCCCCGCAGTGACCATCTGCACC...AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCAGGTCAAAGAGCGTCTaGTCTGTGATGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPRSKSV*SVMRSS
Trigger: GCTGGACCGCATCACAGAGCAGACGCTCTTTGACCT...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGCAACAGGAACATCACTaGCATTCTTGGTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: PLPILLPLHTSTAVWAALQQEHH*HSWCSR
Trigger: GCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTG...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACCACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGCACATCCTTCAATCTTaGCAGGGCCAGCACCCTCCC +
Preference number: 4 (lower is better)
Translates to: AKALLGSFISYCSWSNFLHILQS*QGQHPP
Trigger: GGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTG...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGATCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: PILLPLHTSTAVWAALRGSERKP*TSFNLA
Trigger: GGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTTACCCATCTTaGTTCCCCTCCACACATCAA +
Preference number: 4 (lower is better)
Translates to: PILLPLHTSTAVWAALRGSPYPS*FPSTHQ
Trigger: TTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCT...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAGCCCTTACCCATCTTaGTTCCCCTCCACACATCAA +
Preference number: 4 (lower is better)
Translates to: PHINGSLGGSERKPCTSFSPYPS*FPSTHQ
Trigger: TTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCT...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp AGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGAAACCCGTGCATGCCTaGGTGTACCCTTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: RVFRGSTKGYRAGAKALLKPVHA*VYPWLC
Trigger: ACACAACCAAGGGTACACGCAGGCATGCACGGGTTT...CAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCCAGGAAACCCGTGCATaGCTGCGTGTACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPQETRA*LRVPLV
Trigger: AACCAAGGGTACACGCAGGCATGCACGGGTTTCCTG...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGACAGGAAACCCGTGCATaGCTGCGTGTACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRQETRA*LRVPLV
Trigger: AACCAAGGGTACACGCAGGCATGCACGGGTTTCCTG...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GTTGGGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGTCAGGGAAGGGGAATTaGCTAAGTAACAAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VGWGNQSVQRQYQGVQGWSGKGN*LSNKGG
Trigger: GCCCCCTTTGTTACTTAGGCAATTCCCCTTCCCTGA...CCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp TTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTCAGGGTTCTAAGGGATaGATAGGAGTTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FNLARASTLPPEEHLPWCQGSKG*IGVLWQ
Trigger: CTGCCAGAGAACTCCTATGCATCCCTTAGAACCCTG...ACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp TATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGGCTGCCCCTGGCCATaGCCATGTCCCACCCTGCGC +
Preference number: 4 (lower is better)
Translates to: YQRFLRKVPCQSSKFRLAGCPWP*PCPTLR
Trigger: GCGCAGGGTGGGACATGGGCATGGCCAGGGGCAGCC...AGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CCA 90 bp CAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGAGCTCAGCCATCTCCACTCCTTCCAGTCCACCTaGGGGTTGTTGTCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: QHEEHDDQQVKDELSHLHSFQST*GLLSRK
Trigger: CTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGA...GTGGAGATGGCTGAGCTCGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CCA 90 bp CTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGTGGTTGCAGGAGACCTaGTTGAAGCGGCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LRNLRSSMRNMMTSRSKTWLQET*LKRQAK
Trigger: CTTCGCCTGCCGCTTCAACCAGGTCTCCTGCAACCA...CGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396966.6
CDS-3UTR CCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTGGAAGACCCATTCCTaGGATGTCACCGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPWKTHS*DVTEGH
Trigger: ATGGCCCTCGGTGACATCCCAGGAATGGGTCTTCCA...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGATGGAAGACCCATTCCTaGGATGTCACCGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRWKTHS*DVTEGH
Trigger: ATGGCCCTCGGTGACATCCCAGGAATGGGTCTTCCA...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTGTCGCGATAGCATCTaGAAGACCCATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LHTSTAVWAALRGSPAHPCRDSI*KTHSWD
Trigger: ATCCCAGGAATGGGTCTTCCAGATGCTATCGCGACA...AGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGTGTCGCGATAGCATCTaGAAGACCCATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SVQRQYQGVQGWSQGTSGCRDSI*KTHSWD
Trigger: ATCCCAGGAATGGGTCTTCCAGATGCTATCGCGACA...CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCATGTCGCGATAGCATCTaGAAGACCCATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VGKPECSEAVPRGTGLEPCRDSI*KTHSWD
Trigger: ATCCCAGGAATGGGTCTTCCAGATGCTATCGCGACA...TGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGACAAGGACAGAGACATaGGGTGGGGGCAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRNLRSSMRNMMTSRSKTTRTET*GGGRSG
Trigger: CCCACTTCTGCCCCCACCCCATGTCTCTGTCCTTGT...CGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CCA 90 bp GCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTACAAGGACAGAGACATaGGGTGGGGGCAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: ALLGSFISYCSWSNFLSPTRTET*GGGRSG
Trigger: CCCACTTCTGCCCCCACCCCATGTCTCTGTCCTTGT...AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGAGCAGGGCCTGGCTaGGACAAGGACAGAGACATG +
Preference number: 4 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFGAGPG*DKDRDM
Trigger: CATGTCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCC...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp ACATTTATTGAGCTCCTGCCTACTTGCTCCAAGCAGGATGATGGGCTAGACATGAGGGGCTGTCAAGGCTaGAGAGGGAGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TFIELLPTCSKQDDGLDMRGCQG*RGSRAW
Trigger: CCAGGCCCTGCTCCCTCTCCAGCCTTGACAGCCCCT...CATGTCTAGCCCATCATCCTGCTTGGAGCAAGTAGGCAGGAGCTCAATAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HINGSLGGSERKPCTSFNTSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GGETRVFRGSTKGYRAGAISYCS*SNFLSP
Trigger: AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGAT...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LASPPHINGSLGGSERKPISYCS*SNFLSP
Trigger: AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGAT...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TGGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGGAGCCAAGGCACTTCTaGGCAGCTTCATCAGCTACT +
Preference number: 4 (lower is better)
Translates to: WAGNPCMPACTLGCVLSWEPRHF*AASSAT
Trigger: AGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTC...CCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGGAAACCAGAGTGTTCAGAGCAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QGKKRLSRSWVGKPECSEQGVQG*SQGTSG
Trigger: CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTG...CTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCGCTCCAAGTTTCGCTTaGCTGATCCAAGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GSERKPCTSFNLARASTLAPSFA*LIQGKK
Trigger: CTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGC...GAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCAGCTCCAAGTTTCGCTTaGCTGATCCAAGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: WAALRGSPAHPSILPGPAAPSFA*LIQGKK
Trigger: CTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGC...TGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGGCTCCAAGTTTCGCTTaGCTGATCCAAGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVAPSFA*LIQGKK
Trigger: CTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGC...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGTACTGGAGAGCAGTGTaGCCAGGCCAGTCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWYWRAV*PGQSGA
Trigger: AGCCCCCGACTGGCCTGGCCACACTGCTCTCCAGTA...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGAGACATCTGTGCTACTaGAGAGCAGTGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWRHLCY*RAVWPG
Trigger: GCCTGGCCACACTGCTCTCCAGTAGCACAGATGTCT...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGAAGGGGGCTTTTGGGTaGGGTTTCCCACCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: STAVWAALRGSPAHPSILKGAFG*GFPPKF
Trigger: GAACTTGGGTGGGAAACCCCACCCAAAAGCCCCCTT...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCAGGCTAGAGGAGCCCTaGGTCTGCCTTTACTTACCC +
Preference number: 4 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPRLEEP*VCLYLP
Trigger: GGGTAAGTAAAGGCAGACCCAGGGCTCCTCTAGCCT...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCTGCATAGGAGTTCTCTaGCAGATGGTTGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: GGETRVFRGSTKGYRAGACIGVL*QMVGET
Trigger: AGTTTCCCCAACCATCTGCCAGAGAACTCCTATGCA...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCGGGGAAGACAAGATGTaGCAGAAGCGTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: PPHINGSLGGSERKPCTSGEDKM*QKRSQK
Trigger: CTTTTGTGAACGCTTCTGCCACATCTTGTCTTCCCC...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp ACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAGTGAGAGTAATTCCTaGTTGAAGCGGCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: THLASPPHINGSLGGSERSESNS*LKRQAK
Trigger: CTTCGCCTGCCGCTTCAACCAGGAATTACTCTCACT...CCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR CCA 90 bp AGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGCATGATACCTCCCCTTaGAAGGGACAGCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: RGSPAHPSILPGPAPSHQHDTSP*KGQLDF
Trigger: AAAATCCAGCTGTCCCTTCCAAGGGGAGGTATCATG...CTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543768.1
3UTR CAA 72 bp TTCTGCTCTGCGCGCAGCATCAGGGACAGACCGTTGTaGATTCCAGGCATGGAAGACATCCAGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: FCSARSIRDRPL*IPGMEDIQRLE
Trigger: CTCCAACCTCTGGATGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCTGATGCTGCGCGCAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR TCA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGAGCGGCAGGCGAAGATaGAGTTGCCCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWSGRRR*SCPACP
Trigger: AGGACACGCTGGGCAACTTCATCTTCGCCTGCCGCT...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp GGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCAAGCGGCAGGCGAAGATaGAGTTGCCCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GEGGVINFGEDKMWQKRSSGRRR*SCPACP
Trigger: AGGACACGCTGGGCAACTTCATCTTCGCCTGCCGCT...TGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp CTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGTTTCCTTCCTCATGCTaGTGGAGGTCTCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: LRNLRSSMRNMMTSRSKTFPSSC*WRSPRQ
Trigger: CTGGCGTGGAGACCTCCATCAGCATGAGGAAGGAAA...CGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR TCA 90 bp AGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGAGCTCAGCCATCTCCTTTCCTTCCTCATGCTaGTGGAGGTCTCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: SSMRNMMTSRSKTSSAISFPSSC*WRSPRQ
Trigger: CTGGCGTGGAGACCTCCATCAGCATGAGGAAGGAAA...GGAGATGGCTGAGCTCGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR TCA 90 bp TGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAACAGCCCAGGTGGTCTaGGGAGAAGTCAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: CYSVLREPRRRRSDQFWGTAQVV*GEVNLE
Trigger: CTCCAGGTTGACTTCTCCTCAGACCACCTGGGCTGT...TCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGACAGCCCAGGTGGTCTaGGGAGAAGTCAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPETAQVV*GEVNLE
Trigger: CTCCAGGTTGACTTCTCCTCAGACCACCTGGGCTGT...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp GGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCAGCTTCCGGCACTTGGTaGAACAGCCCAGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GEGGVINFGEDKMWQKRSASGTW*NSPGGL
Trigger: CAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGC...TGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp CAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QLPEPLPILLPLHTSTAVASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...AACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGCAGTTTGGGCGGCTCTaGGAGGAAGCCCTGCACATC +
Preference number: 4 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWQFGRL*EEALHI
Trigger: GATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTG...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp CGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCACTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: REPRRRRSDQFWGRQDVALGATS*ALTHLA
Trigger: AGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAG...TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp GGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGCAAGTTTCGCTTGGCTaGTCCAAGGGAAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: GETRVFRGSTKGYRAGAKQVSLG*SKGKRD
Trigger: GTCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTG...CTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp GTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCACAAGTTTCGCTTGGCTaGTCCAAGGGAAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: VGKPECSEAVPRGTGLEPQVSLG*SKGKRD
Trigger: GTCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTG...TGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGGGGAAACTTTCAGGCTaGGGAAATATCTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVGKLSG*GNISSR
Trigger: TCTGCTTGAGATATTTCCTCAGCCTGAAAGTTTCCC...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp AAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGATCGGGGCCCAGCCCCTaGTCCTCACGCTTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: KFLVKAPSFAWLIQGKKRSGPSP*SSRLFP
Trigger: GGGGAACAAGCGTGAGGAGCAGGGGCTGGGCCCCGA...TCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAAAAGCAGGCCGAATTaGCAGTACATCATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVKSRPN*QYIMPK
Trigger: CTTTGGCATGATGTACTGGCAATTCGGCCTGCTTTT...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp CCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTGGTGCAGATGGTCACTaGGGGGAAGACGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PGEGGVINFGEDKMWQKRGADGH*GEDELV
Trigger: GACAAGCTCGTCTTCCCCGCAGTGACCATCTGCACC...ACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228916.7
ENST00000360168.7
CDS-3UTR GCA 90 bp TACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGAGGCGCTGCAAGGGGTaGGGCAGAGTCCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: YSLVGKGDTNVQESMVQQRRCKG*GRVPRR
Trigger: CCTGCGGGGGACTCTGCCGCACCCCTTGCAGCGCCT...CTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp CAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTCACTGCCATTCTTGGTaGAGTCGCCATAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: QLPEPLPILLPLHTSTAVHCHSW*SRHNRP
Trigger: GGGGCGATTATGGCGACTGCACCAAGAATGGCAGTG...AACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGCACTGCCATTCTTGGTaGAGTCGCCATAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: LRNLRSSMRNMMTSRSKTHCHSW*SRHNRP
Trigger: GGGGCGATTATGGCGACTGCACCAAGAATGGCAGTG...CGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR GCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCACAACAGGAACATCACTaGCATTCTTGGTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSQQEHH*HSWCSR
Trigger: GCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTG...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCATCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSSERKP*TSFNLA
Trigger: GGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR GCA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGAGGAGCAGACATCTGTaGTACTGGAGAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: STAVWAALRGSPAHPSILRSRHL*YWRAVW
Trigger: CCACACTGCTCTCCAGTAGCACAGATGTCTGCTCCT...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTTCCTTCCAGTCCACCTaGGGGTTGTTGTCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFSFQST*GLLSRK
Trigger: CTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGA...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGTTCTGGTTGCACAGCTaGAAGCCGATCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGFWLHS*KPIFQS
Trigger: GGACTGGAAGATCGGCTTCCAGCTGTGCAACCAGAA...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGTTCTGGTTGCACAGCTaGAAGCCGATCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: STAVWAALRGSPAHPSILFWLHS*KPIFQS
Trigger: GGACTGGAAGATCGGCTTCCAGCTGTGCAACCAGAA...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTGGATGGCAGAGTCTCTaGCAGCCTCGACAGGATGTT +
Preference number: 4 (lower is better)
Translates to: QLPEPLPILLPLHTSTAVGWQSL*QPRQDV
Trigger: AACATCCTGTCGAGGCTGCCAGAGACTCTGCCATCC...AACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGGAAACCAGAGTGTTCAGAGTGGTTGCAGGAGACCTaGTTGAAGCGGCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: QGKKRLSRSWVGKPECSEWLQET*LKRQAK
Trigger: CTTCGCCTGCCGCTTCAACCAGGTCTCCTGCAACCA...CTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CCA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAAGGGAGGATGCCAGGGTaGAGGCTACCTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQGRMPG*RLPPEH
Trigger: GTGCTCAGGAGGTAGCCTCCACCCTGGCATCCTCCC...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAACCCTGCAGAGCCCCCTaGAGATGGGCGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LVVFCPGYQRFLRKVPCQPCRAP*RWAGAQ
Trigger: CTGGGCCCCCGCCCATCTCCAGGGGGCTCTGCAGGG...TTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATGACAGGTGGAGGAACTaGCCCCTGCAGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADDRWRN*PLQSPL
Trigger: CAGGGGGCTCTGCAGGGGCCAGTTCCTCCACCTGTC...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AKALLGSFISYCSWSNFLTSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAAGAGCCAAGGCACTTCTaGGCAGCTTCATCAGCTACT +
Preference number: 4 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQEPRHF*AASSAT
Trigger: AGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTC...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATGAGCCAAGGCACTTCTaGGCAGCTTCATCAGCTACT +
Preference number: 4 (lower is better)
Translates to: HINGSLGGSERKPCTSFNEPRHF*AASSAT
Trigger: AGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTC...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTGCATAGGAGTTCTCTaGCAGATGGTTGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: GVQGWSQGTSGQLHQLLFCIGVL*QMVGET
Trigger: AGTTTCCCCAACCATCTGCCAGAGAACTCCTATGCA...GAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGGGGGAAGACAAGATGTaGCAGAAGCGTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGGEDKM*QKRSQK
Trigger: CTTTTGTGAACGCTTCTGCCACATCTTGTCTTCCCC...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CAA 72 bp GCTGGGCAGGAAACCCGTGCATGCCTGCGTGTACCCTaGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: AGQETRACLRVP*VVFCPGYQRFL
Trigger: AAGAAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
3UTR CAA 72 bp TCATTCTGCTCTGCGCGCAGCATCAGGGACAGACCGTaGTTGATTCCAGGCATGGAAGACATCCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SFCSARSIRDRP*LIPGMEDIQRL
Trigger: CAACCTCTGGATGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCTGATGCTGCGCGCAGAGCAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR TCA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAAAGCGGCAGGCGAAGATaGAGTTGCCCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQSGRRR*SCPACP
Trigger: AGGACACGCTGGGCAACTTCATCTTCGCCTGCCGCT...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp CAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGGAAACCAGAGTGTTCAGAGTTTCCTTCCTCATGCTaGTGGAGGTCTCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: QGKKRLSRSWVGKPECSEFPSSC*WRSPRQ
Trigger: CTGGCGTGGAGACCTCCATCAGCATGAGGAAGGAAA...CTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGGCATCTGCCTTGGTGTaGGAAACCTCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPEASALV*ETSPSL
Trigger: GAGGGAAGGAGAGGTTTCTCACACCAAGGCAGATGC...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGACATGTAGAGGTATaGAAGACACAGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSERHVEV*KTQGRG
Trigger: ACCTCTGCCCTGTGTCTTTCATACCTCTACATGTCT...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp TTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGCAACAAACATTTATTaGGCTCCTGCCTACTTGCTC +
Preference number: 4 (lower is better)
Translates to: FNLARASTLPPEEHLPWCATNIY*APAYLL
Trigger: GAGCAAGTAGGCAGGAGCTCAATAAATGTTTGTTGC...ACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp AGGGTAAAGGTTCTCAACAGGAACATCACTGCCATTCTTGGTGCAGTCGCCATAGTCTTCATGCGGTTGTaGTGGGAGCACACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RVKVLNRNITAILGAVAIVFMRL*WEHTRR
Trigger: CCGCCTGGTGTGCTCCCAGCACAACCGCATGAAGAC...TATGGCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTGAGAACCTTTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR GCA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGACATCATGCCAAAGGTaGAGAGCCACAGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPETSCQR*RATALP
Trigger: GGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGT...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGATTGCCAGTACATCATaGCAAAGGTGCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSEIASTS*QRCRAT
Trigger: TGTGGCTCTGCACCTTTGGCATGATGTACTGGCAAT...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGAAAAGCAGGCCGAATTaGCAGTACATCATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AVWAALRGSPAHPSILPGKSRPN*QYIMPK
Trigger: CTTTGGCATGATGTACTGGCAATTCGGCCTGCTTTT...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp GGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGCAACAGGAACATCACTaGCATTCTTGGTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: GSPGEGGVINFGEDKMWQQQEHH*HSWCSR
Trigger: GCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTG...CTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAATCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQSERKP*TSFNLA
Trigger: GGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp TGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCATACAAGAAAGTATGGTaGAACAGCAACACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WAALRGSPAHPSILPGPAYKKVW*NSNTPA
Trigger: TGCTGGAGTGTTGCTGTTGCACCATACTTTCTTGTA...TGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTCAGTCCGATTTGTTCTaGTTGCACAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: QLPEPLPILLPLHTSTAVQSDLF*LHSWKP
Trigger: CGGCTTCCAGCTGTGCAACCAGAACAAATCGGACTG...AACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGACATCACTGCCATTCTTaGTGCAGTCGCCATAATCGC +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRHHCHS*CSRHNR
Trigger: GCGATTATGGCGACTGCACCAAGAATGGCAGTGATG...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGCTGGTCACGCTGCATaGCTTCCGGCACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWAGHAA*LPALGE
Trigger: TTCACCAAGTGCCGGAAGCCATGCAGCGTGACCAGC...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp AAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGCCCCCAGAGGACAGGTaGAGGAACTGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KVPCQSSKFRLADPREKEPPEDR*RNWPLQ
Trigger: CTGCAGGGGCCAGTTCCTCCACCTGTCCTCTGGGGG...CTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFTSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp CTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGAGACTTAGCCGCAGTTaGGTGGGGAAACCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LRNLRSSMRNMMTSRSKTRLSRS*VGKPEC
Trigger: ACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCT...CGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
3UTR CAA 72 bp GGCAGGAAACCCGTGCATGCCTGCGTGTACCCTTGGTaGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: GRKPVHACVYPW*CFVLVISGFLG
Trigger: TCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACGGGTTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp GTTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTGCCCGTGCACCATTACCACAGCCACACTCCTTaGTCATGCTCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VKATIIHKGRFILPVHHYHSHTP*SCSPGS
Trigger: GCTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTG...GTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR TCA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGCACAGCCACACTCCTTaGTCATGCTCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWHSHTP*SCSPGS
Trigger: GCTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTG...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGCATTTCTCTTGTTGTTaGCGGTGTAATTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SILPGPAPSHQRSICLGVHFSCC*RCNCSV
Trigger: GACAGAACAATTACACCGTCAACAACAAGAGAAATG...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp AATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGCATTTCTCTTGTTGTTaGCGGTGTAATTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: NLARASTLPPEEHLPWCEHFSCC*RCNCSV
Trigger: GACAGAACAATTACACCGTCAACAACAAGAGAAATG...CTCACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCCATTTCTCTTGTTGTTaGCGGTGTAATTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: PPHINGSLGGSERKPCTSHFSCC*RCNCSV
Trigger: GACAGAACAATTACACCGTCAACAACAAGAGAAATG...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CAGCATCAGGGACAGACCGTTGTTGATTCCAGGCATGGAAGACATCCAGAGGTTCTTGGAGCAACTTCCTaGGCCCTTACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: QHQGQTVVDSRHGRHPEVLGATS*ALTHLA
Trigger: AGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAG...AACCTCTGGATGTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCTGATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR TCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATAGACATGTAGAGGTATaGAAGACACAGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: HINGSLGGSERKPCTSFNRHVEV*KTQGRG
Trigger: ACCTCTGCCCTGTGTCTTTCATACCTCTACATGTCT...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAAAAGCAGGCCGAATTaGCAGTACATCATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LTHLASPPHINGSLGGSEKSRPN*QYIMPK
Trigger: CTTTGGCATGATGTACTGGCAATTCGGCCTGCTTTT...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp TTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAGGGACCCTCAGGCGCTaGAAGGGGTGCGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LVVFCPGYQRFLRKVPCQGTLRR*KGCGRV
Trigger: GACTCTGCCGCACCCCTTGCAGCGCCTGAGGGTCCC...TTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp GGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACACTGCCATTCTTGGTaGAGTCGCCATAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: GEGGVINFGEDKMWQKRSHCHSW*SRHNRP
Trigger: GGGGCGATTATGGCGACTGCACCAAGAATGGCAGTG...TGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp AAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGACAGGCTCCACTGGCTaGCCAGGTTGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: KVPCQSSKFRLADPREKETGSTG*PGWTGG
Trigger: CCCTCCTGTCCAACCTGGGCAGCCAGTGGAGCCTGT...CTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp TGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGACACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: CYSVLREPRRRRSDQFWGHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...TCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTTACCCATCTTaGTTCCCCTCCACACATCAA +
Preference number: 4 (lower is better)
Translates to: AKALLGSFISYCSWSNFLSPYPS*FPSTHQ
Trigger: TTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCT...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp GCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTCAGGGTTCTAAGGGATaGATAGGAGTTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLGSFISYCSWSNFLSPQGSKG*IGVLWQ
Trigger: CTGCCAGAGAACTCCTATGCATCCCTTAGAACCCTG...AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAAGCTGGTCACGCTGCATaGCTTCCGGCACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQAGHAA*LPALGE
Trigger: TTCACCAAGTGCCGGAAGCCATGCAGCGTGACCAGC...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGTGGAAGACCCATTCCTaGGATGTCACCGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWWKTHS*DVTEGH
Trigger: ATGGCCCTCGGTGACATCCCAGGAATGGGTCTTCCA...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATGGAGCAGGGCCTGGCTaGGACAAGGACAGAGACATG +
Preference number: 4 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADGAGPG*DKDRDM
Trigger: CATGTCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCC...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGACATCAACGGCAGTTTaGGCGGCTCTGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWTSTAV*AALRGS
Trigger: GCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGT...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATATCAGCTACTGTTCTTaGAGCAACTTCCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HINGSLGGSERKPCTSFNISYCS*SNFLSP
Trigger: AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGAT...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CCA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAATGCATAGGAGTTCTCTaGCAGATGGTTGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQCIGVL*QMVGET
Trigger: AGTTTCCCCAACCATCTGCCAGAGAACTCCTATGCA...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp AATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGATGTACAAGAAAGTATaGTGCAACAGCAACACTCCA +
Preference number: 4 (lower is better)
Translates to: NLARASTLPPEEHLPWCEMYKKV*CNSNTP
Trigger: TGGAGTGTTGCTGTTGCACCATACTTTCTTGTACAT...CTCACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp AGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCACTTACAGTCTAGTTaGGAAGGGAGACACAAATGT +
Preference number: 4 (lower is better)
Translates to: SVQRQYQGVQGWSQGTSGHLQSS*EGRHKC
Trigger: ACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTG...CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GTTGGGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGCACTTACAGTCTAGTTaGGAAGGGAGACACAAATGT +
Preference number: 4 (lower is better)
Translates to: VGWGNQSVQRQYQGVQGWHLQSS*EGRHKC
Trigger: ACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTG...CCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGCTTGGAAGGGACAGCTaGATTTTTCTTCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLGGSERKPCTSFNLARLGRDS*IFLHCP
Trigger: AGGACAATGAAGAAAAATCCAGCTGTCCCTTCCAAG...CCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543768.1
CDS-3UTR TCA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTGCTGTGTGTACTTTaGAGGGTAAAGGTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: HINGSLGGSERKPCTSFNLLCVL*RVKVLN
Trigger: GTTGAGAACCTTTACCCTTCAAAGTACACACAGCAG...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGCTGCTGTGTGTACTTTaGAGGGTAAAGGTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWLLCVL*RVKVLN
Trigger: GTTGAGAACCTTTACCCTTCAAAGTACACACAGCAG...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp AGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCATTTCTCTTGTTGTTaGCGGTGTAATTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SVQRQYQGVQGWSQGTSGHFSCC*RCNCSV
Trigger: GACAGAACAATTACACCGTCAACAACAAGAGAAATG...CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACATTTCTCTTGTTGTTaGCGGTGTAATTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SERKPCTSFNLARASTLPHFSCC*RCNCSV
Trigger: GACAGAACAATTACACCGTCAACAACAAGAGAAATG...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTAGACATGTAGAGGTATaGAAGACACAGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QLPEPLPILLPLHTSTAVRHVEV*KTQGRG
Trigger: ACCTCTGCCCTGTGTCTTTCATACCTCTACATGTCT...AACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCGCAACAAACATTTATTaGGCTCCTGCCTACTTGCTC +
Preference number: 4 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPATNIY*APAYLL
Trigger: GAGCAAGTAGGCAGGAGCTCAATAAATGTTTGTTGC...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGCAACAAACATTTATTaGGCTCCTGCCTACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LPILLPLHTSTAVWAALRATNIY*APAYLL
Trigger: GAGCAAGTAGGCAGGAGCTCAATAAATGTTTGTTGC...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp TGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAACAAAGAGGGGAAGGGTaGGGGCCTCGGCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: WLCFVLVISGFLGKFLVKQRGEG*GPRPWR
Trigger: ACGCCAAGGCCGAGGCCCTCACCCTTCCCCTCTTTG...TTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR GCA 90 bp GTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTGTCTTCATGCGGTTGTaGTGGGAGCACACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VPLVVFCPGYQRFLRKVPVFMRL*WEHTRR
Trigger: CCGCCTGGTGTGCTCCCAGCACAACCGCATGAAGAC...AGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAAGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228916.7
ENST00000360168.7
CDS-3UTR GCA 90 bp GTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCGTCTTCATGCGGTTGTaGTGGGAGCACACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VFCPGYQRFLRKVPCQSSVFMRL*WEHTRR
Trigger: CCGCCTGGTGTGCTCCCAGCACAACCGCATGAAGAC...GGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp CAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGAGCTCAGCCATCTCCACATTGCCAGTACATCATaGCAAAGGTGCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: QHEEHDDQQVKDELSHLHIASTS*QRCRAT
Trigger: TGTGGCTCTGCACCTTTGGCATGATGTACTGGCAAT...GTGGAGATGGCTGAGCTCGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR GCA 90 bp CTTCGGAACCTTCGGAGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGATTGCCAGTACATCATaGCAAAGGTGCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: LRNLRSSMRNMMTSRSKTIASTS*QRCRAT
Trigger: TGTGGCTCTGCACCTTTGGCATGATGTACTGGCAAT...CGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR GCA 90 bp AGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCGGTGCAGATGGTCACTaGGGGGAAGACGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SGFLGKFLVKAPSFAWLIGADGH*GEDELV
Trigger: GACAAGCTCGTCTTCCCCGCAGTGACCATCTGCACC...GATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp GCAAGGCACTTACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ARHLQSSWEGRHKCTRKYGSSCP*TITRAP
Trigger: TGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACC...ATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp CTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGG +
Preference number: 4 (lower is better)
Translates to: LRKVPCQSSKFRLADPREKAGSS*PCTITR
Trigger: CCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTT...TTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAACACTGCCATTCTTGGTaGAGTCGCCATAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQHCHSW*SRHNRP
Trigger: GGGGCGATTATGGCGACTGCACCAAGAATGGCAGTG...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGGAAACCAGAGTGTTCAGAGCATCACTGCCATTCTTaGTGCAGTCGCCATAATCGC +
Preference number: 4 (lower is better)
Translates to: QGKKRLSRSWVGKPECSEHHCHS*CSRHNR
Trigger: GCGATTATGGCGACTGCACCAAGAATGGCAGTGATG...CTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGACATCACTGCCATTCTTaGTGCAGTCGCCATAATCGC +
Preference number: 4 (lower is better)
Translates to: CYSVLREPRRRRSDQFWGHHCHS*CSRHNR
Trigger: GCGATTATGGCGACTGCACCAAGAATGGCAGTGATG...TCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATACAAGGACAGAGACATaGGGTGGGGGCAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADTRTET*GGGRSG
Trigger: CCCACTTCTGCCCCCACCCCATGTCTCTGTCCTTGT...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGAGAGGGAGCAGGGCCTaGCTGGGACAAGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: KVPCQSSKFRLADPREKERGSRA*LGQGQR
Trigger: TCTCTGTCCTTGTCCCAGCCAGGCCCTGCTCCCTCT...CTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCCAAGGGGTACAGGGCTaGAGCCAAGGCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VFCPGYQRFLRKVPCQSSQGVQG*SQGTSG
Trigger: CCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTG...GGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGGCTCCAAGTTTCGCTTaGCTGATCCAAGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: AKALLGSFISYCSWSNFLAPSFA*LIQGKK
Trigger: CTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGC...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp CAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGGAAACCAGAGTGTTCAGAGGCCTGCGTGTACCCTTaGTTGTGTTTTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: QGKKRLSRSWVGKPECSEACVYP*LCFVLV
Trigger: AACCAGGACAAAACACAACCAAGGGTACACGCAGGC...CTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCCGGAGTGATCAATTTTaGGGAAGACAAGATGTGGCA +
Preference number: 4 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPRSDQF*GRQDVA
Trigger: TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCG...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGCGGAGTGATCAATTTTaGGGAAGACAAGATGTGGCA +
Preference number: 4 (lower is better)
Translates to: GSPGEGGVINFGEDKMWQRSDQF*GRQDVA
Trigger: TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCG...CTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGGTCAAGGCTGAGCTCTaGGCCCTGAGTGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YSLVGKGDTNVQESMVQQVKAEL*ALSALS
Trigger: GGAGAGGGCACTCAGGGCCCAGAGCTCAGCCTTGAC...CTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360168.7
3UTR CAA 72 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCCTTACCCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QGTSGQLHQLLF*EQLPEPLPILL
Trigger: AAGCAAGATGGGTAAGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCACATTTCTCTTGTTGTTaGCGGTGTAATTGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSHFSCC*RCNCSV
Trigger: GACAGAACAATTACACCGTCAACAACAAGAGAAATG...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTCAAGTTTCGCTTGGCTaGTCCAAGGGAAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PGEGGVINFGEDKMWQKRQVSLG*SKGKRD
Trigger: GTCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTG...ACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAGACCTGGTATGGGCTaGAGAGGTCTAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VFCPGYQRFLRKVPCQSSRPGMG*RGLGSC
Trigger: GCAGGACCCTAGACCTCTGCAGCCCATACCAGGTCT...GGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228916.7
ENST00000360168.7
CDS-3UTR GCA 90 bp AAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGGCAGAGCCACAGCACTaGCCAGAAGGCCGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KVPCQSSKFRLADPREKEAEPQH*PEGRLH
Trigger: ATGAAGACGGCCTTCTGGGCAGTGCTGTGGCTCTGC...CTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp GTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCGGTGCAGATGGTCACTaGGGGGAAGACGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: VFCPGYQRFLRKVPCQSSGADGH*GEDELV
Trigger: GACAAGCTCGTCTTCCCCGCAGTGACCATCTGCACC...GGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CCA 90 bp GTTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTGCCCGTGCACCATTACGAGAGTAATTCCAGCTaGAAGCCGATCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VKATIIHKGRFILPVHHYESNSS*KPIFQS
Trigger: GGACTGGAAGATCGGCTTCCAGCTGGAATTACTCTC...GTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR TCA 90 bp AAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGGCCTCGACAGGATGTTaGTGTAGTGGAAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: KVPCQSSKFRLADPREKEASTGC*CSGSGT
Trigger: GGTACCGCTTCCACTACATCAACATCCTGTCGAGGC...CTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR TCA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTCTGCTGTGTGTACTTTaGAGGGTAAAGGTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFLLCVL*RVKVLN
Trigger: GTTGAGAACCTTTACCCTTCAAAGTACACACAGCAG...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR TCA 90 bp CCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTCTGCTGTGTGTACTTTaGAGGGTAAAGGTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: PGEGGVINFGEDKMWQKRLLCVL*RVKVLN
Trigger: GTTGAGAACCTTTACCCTTCAAAGTACACACAGCAG...ACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGAAACTTTCAGGCTaGGGAAATATCTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFGKLSG*GNISSR
Trigger: TCTGCTTGAGATATTTCCTCAGCCTGAAAGTTTCCC...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp TGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGTCTTCATGCGGTTGTaGTGGGAGCACACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: WLCFVLVISGFLGKFLVKVFMRL*WEHTRR
Trigger: CCGCCTGGTGTGCTCCCAGCACAACCGCATGAAGAC...TTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGAAAAGCAGGCCGAATTaGCAGTACATCATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPEKSRPN*QYIMPK
Trigger: CTTTGGCATGATGTACTGGCAATTCGGCCTGCTTTT...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR GCA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTAAAAGCAGGCCGAATTaGCAGTACATCATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFKSRPN*QYIMPK
Trigger: CTTTGGCATGATGTACTGGCAATTCGGCCTGCTTTT...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR GCA 90 bp CTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAACACCAGAGGAGCATCTaGCTTGGTGTGAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: LRKVPCQSSKFRLADPREHQRSI*LGVRNL
Trigger: GAGGTTTCTCACACCAAGGCAGATGCTCCTCTGGTG...TTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp TACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGTGGGCAGGAAACCCGTaGATGCCTGCGTGTACCCTT +
Preference number: 4 (lower is better)
Translates to: YSLVGKGDTNVQESMVQQWAGNP*MPACTL
Trigger: AAGGGTACACGCAGGCATGCACGGGTTTCCTGCCCA...CTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGTCCTTCCAGTCCACCTaGGGGTTGTTGTCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: YSLVGKGDTNVQESMVQQSFQST*GLLSRK
Trigger: CTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGA...CTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATTTCTGGTTGCACAGCTaGAAGCCGATCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADFWLHS*KPIFQS
Trigger: GGACTGGAAGATCGGCTTCCAGCTGTGCAACCAGAA...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp CTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAATTCTGGTTGCACAGCTaGAAGCCGATCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRKVPCQSSKFRLADPREFWLHS*KPIFQS
Trigger: GGACTGGAAGATCGGCTTCCAGCTGTGCAACCAGAA...TTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAACCACAGGCTCCACTaGCTGCCCAGGTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: LVVFCPGYQRFLRKVPCQNHRLH*LPRLDR
Trigger: CCTGTCCAACCTGGGCAGCCAGTGGAGCCTGTGGTT...TTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp AGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCAGACTTAGCCGCAGTTaGGTGGGGAAACCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: SGFLGKFLVKAPSFAWLIRLSRS*VGKPEC
Trigger: ACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCT...GATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp GGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCAGCTCCAAGTTTCGCTTaGCTGATCCAAGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GEGGVINFGEDKMWQKRSAPSFA*LIQGKK
Trigger: CTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGC...TGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGGGAAGACAAGATGTaGCAGAAGCGTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWGEDKM*QKRSQK
Trigger: CTTTTGTGAACGCTTCTGCCACATCTTGTCTTCCCC...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp TTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAGCTTGTTCCCCTCCATaGGACCTGGTATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVVFCPGYQRFLRKVPCQACSPP*DLVWAA
Trigger: TGCAGCCCATACCAGGTCTCATGGAGGGGAACAAGC...TTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR TCA 90 bp TACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGTGGACAGCAGGGGAATaGAGTCATTCTGCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: YSLVGKGDTNVQESMVQQWTAGE*SHSALR
Trigger: GCGCAGAGCAGAATGACTTCATTCCCCTGCTGTCCA...CTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp TTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAGAGGAGCCCTGGGTCTaGCTTTACTTACCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LVVFCPGYQRFLRKVPCQEEPWV*LYLPGS
Trigger: AGACCCGGGTAAGTAAAGGCAGACCCAGGGCTCCTC...TTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp CGTGCATGCCTGCGTGTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTTACAAGAAAGTATGGTaGAACAGCAACACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RACLRVPLVVFCPGYQRFYKKVW*NSNTPA
Trigger: TGCTGGAGTGTTGCTGTTGCACCATACTTTCTTGTA...AAACCGCTGATAACCAGGACAAAACACAACCAAGGGTACACGCAGGCATGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAGCCTGCGTGTACCCTTaGTTGTGTTTTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: RFLRKVPCQSSKFRLADPACVYP*LCFVLV
Trigger: AACCAGGACAAAACACAACCAAGGGTACACGCAGGC...TGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTCACTTACAGTCTAGTTaGGAAGGGAGACACAAATGT +
Preference number: 4 (lower is better)
Translates to: PGEGGVINFGEDKMWQKRHLQSS*EGRHKC
Trigger: ACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTG...ACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCAAGTTTCGCTTGGCTaGTCCAAGGGAAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADQVSLG*SKGKRD
Trigger: GTCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTG...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp GTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCTCTGAGAGGAAGCCCTaGACATCCTTCAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: VFCPGYQRFLRKVPCQSSSERKP*TSFNLA
Trigger: GGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA...GGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR GCA 90 bp GTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTAGCCCTTACCCATCTTaGTTCCCCTCCACACATCAA +
Preference number: 4 (lower is better)
Translates to: VPLVVFCPGYQRFLRKVPSPYPS*FPSTHQ
Trigger: TTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCT...AGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAAGGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTTGTCGCGATAGCATCTaGAAGACCCATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: YQRFLRKVPCQSSKFRLACRDSI*KTHSWD
Trigger: ATCCCAGGAATGGGTCTTCCAGATGCTATCGCGACA...AGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp CAAGGGAAAAAGAGACTTAGCCGCAGTTGGGTGGGGAAACCAGAGTGTTCAGAGATGTACAAGAAAGTATaGTGCAACAGCAACACTCCA +
Preference number: 4 (lower is better)
Translates to: QGKKRLSRSWVGKPECSEMYKKV*CNSNTP
Trigger: TGGAGTGTTGCTGTTGCACCATACTTTCTTGTACAT...CTCTGAACACTCTGGTTTCCCCACCCAACTGCGGCTAAGTCTCTTTTTCCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GCAAGGCACTTACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATCAACAGGAACATCACTaGCATTCTTGGTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: ARHLQSSWEGRHKCTRKYQQEHH*HSWCSR
Trigger: GCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTG...ATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTGCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp GCAAGGCACTTACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATCAGGGTTCTAAGGGATaGATAGGAGTTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ARHLQSSWEGRHKCTRKYQGSKG*IGVLWQ
Trigger: CTGCCAGAGAACTCCTATGCATCCCTTAGAACCCTG...ATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTGCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp GCAAGGCACTTACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGCCTGCGTGTACCCTTaGTTGTGTTTTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ARHLQSSWEGRHKCTRKYACVYP*LCFVLV
Trigger: AACCAGGACAAAACACAACCAAGGGTACACGCAGGC...ATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTAAGTGCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR GCA 90 bp AGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCTACAAGAAAGTATGGTaGAACAGCAACACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SGFLGKFLVKAPSFAWLIYKKVW*NSNTPA
Trigger: TGCTGGAGTGTTGCTGTTGCACCATACTTTCTTGTA...GATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR TCA 90 bp TGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAACAAGTTTCGCTTGGCTaGTCCAAGGGAAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: WLCFVLVISGFLGKFLVKQVSLG*SKGKRD
Trigger: GTCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTG...TTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CCA 90 bp TACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGCGGAGTGATCAATTTTaGGGAAGACAAGATGTGGCA +
Preference number: 4 (lower is better)
Translates to: YSLVGKGDTNVQESMVQQRSDQF*GRQDVA
Trigger: TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCG...CTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CCA 90 bp TACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGATGTACAAGAAAGTATaGTGCAACAGCAACACTCCA +
Preference number: 4 (lower is better)
Translates to: YSLVGKGDTNVQESMVQQMYKKV*CNSNTP
Trigger: TGGAGTGTTGCTGTTGCACCATACTTTCTTGTACAT...CTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS TCA 90 bp TGGGCGGGGCTGGGGTCGTCGTGGCGCCTCCTGGCCGTCCGGCGGTaGAGGGTAAACAGGTGTGTCCGCCGGGAAGGCGGAGGCCACGGC +
Preference number: 5 (lower is better)
Translates to: WAGLGSSWRLLAVRR*RVNRCVRREGGGHG
Trigger: GCCGTGGCCTCCGCCTTCCCGGCGGACACACCTGTTTACCCTTCACCGCCGGACGGCCAGGAGGCGCCACGACGACCCCAGCCCCGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS TCA 90 bp TGCCCTTTCCCAAAGAGGGGAAGGGTGAGGGCCTCGGCCTTGGCGTaGCCGCGGTACCCAGGTCATCCCGCCCTGATCCCCGCAGGCGAG +
Preference number: 5 (lower is better)
Translates to: CPFPKRGRVRASALA*PRYPGHPALIPAGE
Trigger: CTCGCCTGCGGGGATCAGGGCGGGATGACCTGGGTACCGCGGTCACGCCAAGGCCGAGGCCCTCACCCTTCCCCTCTTTGGGAAAGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS TCA 90 bp GCGGAGGCCACGGCGAGCCCAGCCGGGACACTGTGGACTGTTTATTaGAGGAGAGAGGCAGGAGGCGCCTGTCGTCTGTGGGGCGCTCTC +
Preference number: 5 (lower is better)
Translates to: AEATASPAGTLWTVY*RREAGGACRLWGAL
Trigger: GAGAGCGCCCCACAGACGACAGGCGCCTCCTGCCTCTCTCCTTCAATAAACAGTCCACAGTGTCCCGGCTGGGCTCGCCGTGGCCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS GCA 90 bp CGCTCTCCCCCTCGCCCGGACCTAGAAGGGAACCCGGAACTTGTCTaGCCTTTCCCAAAGAGGGGAAGGGTGAGGGCCTCGGCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: RSPPRPDLEGNPELV*PFPKRGRVRASALA
Trigger: CGCCAAGGCCGAGGCCCTCACCCTTCCCCTCTTTGGGAAAGGGCAGACAAGTTCCGGGTTCCCTTCTAGGTCCGGGCGAGGGGGAGAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS TCA 90 bp AAGGGAACCCGGAACTTGTCTGCCCTTTCCCAAAGAGGGGAAGGGTaGGGGCCTCGGCCTTGGCGTGACCGCGGTACCCAGGTCATCCCG +
Preference number: 5 (lower is better)
Translates to: KGTRNLSALSQRGEG*GPRPWRDRGTQVIP
Trigger: CGGGATGACCTGGGTACCGCGGTCACGCCAAGGCCGAGGCCCTCACCCTTCCCCTCTTTGGGAAAGGGCAGACAAGTTCCGGGTTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS CCA 90 bp TGGAGCCAGCAGACCTGCGGGAGTTGGGGCCAAAAGTGCCGGAGCTaGGCTTCCCTAGAACGGCCTCTCCTCTGCTTCCCTGATAGGGCC +
Preference number: 5 (lower is better)
Translates to: WSQQTCGSWGQKCRS*ASLERPLLCFPDRA
Trigger: GGCCCTATCAGGGAAGCAGAGGAGAGGCCGTTCTAGGGAAGCCCAGCTCCGGCACTTTTGGCCCCAACTCCCGCAGGTCTGCTGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CAA 90 bp GGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGGCAGACCTGCGGGAGTaGGGGCCAAAAGTGCCGGAG +
Preference number: 5 (lower is better)
Translates to: GSPAHPSILPGPAPSHQRADLRE*GPKVPE
Trigger: CTCCGGCACTTTTGGCCCCAACTCCCGCAGGTCTGC...CCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS GCA 90 bp CACCTTTCCTGGAGCCAGCAGACCTGCGGGAGTTGGGGCCAAAAGTaGCGGAGCTGGGCTTCCCTAGAACGGCCTCTCCTCTGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: HLSWSQQTCGSWGQK*RSWASLERPLLCFP
Trigger: AGGGAAGCAGAGGAGAGGCCGTTCTAGGGAAGCCCAGCTCCGGCACTTTTGGCCCCAACTCCCGCAGGTCTGCTGGCTCCAGGAAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CAA 90 bp GCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCATCGTGACAGAGGGAGAGCCGTCTTCATGCGGTaGTGCTGGGAGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: APLAAQVGQEGDHRDRGRAVFMR*CWEHTR
Trigger: CCTGGTGTGCTCCCAGCACAACCGCATGAAGACGGC...TCTCCCTCTGTCACGATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CAA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCTCCACCTGGGGGTTGTaGTCCCGCAAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GGETRVFRGSTKGYRAGASTWGL*SRKLEA
Trigger: GGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGA...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTCCACCTGGGGGTTGTaGTCCCGCAAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LASPPHINGSLGGSERKPSTWGL*SRKLEA
Trigger: GGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGA...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp AATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGAGTCCACCTGGGGGTTGTaGTCCCGCAAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: NLARASTLPPEEHLPWCESTWGL*SRKLEA
Trigger: GGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGA...CTCACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGCACTGGCTGCCCAGGTaGGACAGGAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: GSPAHPSILPGPAPSHQRHWLPR*DRRVTI
Trigger: GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTG...CCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp TCCTGCCCGTGCACCATTACCCGGGCCCCAGTCACTGTGGACAGCAGGGGAATGGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: SCPCTITRAPVTVDSRGMAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...CATTCCCCTGCTGTCCACAGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS CCA 90 bp TGGTTGCACAGCTGGAAGCCGATCTTCCAGTCCTTCCAGTCCACCTaGGGGTTGTTGTCCCGCAAGCTGGAGGCCACGCTACGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: WLHSWKPIFQSFQST*GLLSRKLEATLRAR
Trigger: TCGAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGACTGGAAGATCGGCTTCCAGCTGTGCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS-3UTR CAA 90 bp GTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGGCCGTCTTCATGCGGTaGTGCTGGGAGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: VQRQYQGVQGWSQGTSGQAVFMR*CWEHTR
Trigger: CCTGGTGTGCTCCCAGCACAACCGCATGAAGACGGC...CTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CAA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCCAGGCGAAGATGAAGTaGCCCAGCGTGTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AALRGSPAHPSILPGPAPQAKMK*PSVSSS
Trigger: GGAGGAGGACACGCTGGGCAACTTCATCTTCGCCTG...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCATGGCTTCCGGCACTaGGTGAAACAGCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GGSERKPCTSFNLARASTHGFRH*VKQPRW
Trigger: CCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATG...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCCATGGCTTCCGGCACTaGGTGAAACAGCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: AALRGSPAHPSILPGPAPHGFRH*VKQPRW
Trigger: CCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATG...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS TCA 90 bp CCTCCTCCAGGGATGGCAGAGTCTCTGGCAGCCTCGACAGGATGTTaGTGTAGTGGAAGCGGTACCACTCCCTCACCGCATCCACCCCTG +
Preference number: 5 (lower is better)
Translates to: PPPGMAESLAASTGC*CSGSGTTPSPHPPL
Trigger: CAGGGGTGGATGCGGTGAGGGAGTGGTACCGCTTCCACTACATCAACATCCTGTCGAGGCTGCCAGAGACTCTGCCATCCCTGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS-3UTR CAA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCGCCGTCTTCATGCGGTaGTGCTGGGAGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: PHINGSLGGSERKPCTSFAVFMR*CWEHTR
Trigger: CCTGGTGTGCTCCCAGCACAACCGCATGAAGACGGC...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCAGCCGTCTTCATGCGGTaGTGCTGGGAGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: SERKPCTSFNLARASTLPAVFMR*CWEHTR
Trigger: CCTGGTGTGCTCCCAGCACAACCGCATGAAGACGGC...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCGCGGGGAAGACGAGCTaGTCCGAGTTGAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: AALRGSPAHPSILPGPAPAGKTS*SELRLM
Trigger: CATCAACCTCAACTCGGACAAGCTCGTCTTCCCCGC...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCGCGGGGAAGACGAGCTaGTCCGAGTTGAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: GGSERKPCTSFNLARASTAGKTS*SELRLM
Trigger: CATCAACCTCAACTCGGACAAGCTCGTCTTCCCCGC...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp GCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCAGTCCACCTGGGGGTaGTTGTCCCGCAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: AVWAALRGSPAHPSILPGQSTWG*LSRKLE
Trigger: CTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTG...CCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCACAGTCCACCTGGGGGTaGTTGTCCCGCAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VGKPECSEAVPRGTGLEPQSTWG*LSRKLE
Trigger: CTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTG...TGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACAGTCCACCTGGGGGTaGTTGTCCCGCAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SERKPCTSFNLARASTLPQSTWG*LSRKLE
Trigger: CTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTG...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGACAGGCGAAGATGAAGTaGCCCAGCGTGTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EEALHILQSCQGQHPPTRQAKMK*PSVSSS
Trigger: GGAGGAGGACACGCTGGGCAACTTCATCTTCGCCTG...TCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCTTGCAGGAGACCTGGTaGAAGCGGCAGGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: ASPPHINGSLGGSERKPCLQETW*KRQAKM
Trigger: CATCTTCGCCTGCCGCTTCAACCAGGTCTCCTGCAA...GCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCCATGGCTTCCGGCACTaGGTGAAACAGCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PPHINGSLGGSERKPCTSHGFRH*VKQPRW
Trigger: CCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATG...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGCACTGGCTGCCCAGGTaGGACAGGAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: GETRVFRGSTKGYRAGAKHWLPR*DRRVTI
Trigger: GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTG...CTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGCACTGGCTGCCCAGGTaGGACAGGAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: GSLGGSERKPCTSFNLARHWLPR*DRRVTI
Trigger: GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTG...CCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp TCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: SFNLARASTLPPEEHLPWAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...CCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp AGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: RGSPAHPSILPGPAPSHQAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...CTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS CCA 90 bp AGTAATTCCAGCTGGAAGCCGATCTTCCAGTCCTTCCAGTCCACCTaGGGGTTGTTGTCCCGCAAGCTGGAGGCCACGCTACGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: SNSSWKPIFQSFQST*GLLSRKLEATLRAR
Trigger: TCGAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGACTGGAAGATCGGCTTCCAGCTGGAATTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR CAA 90 bp AGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCTTGTCCGAGTTGAGGTaGATGTTGAGGCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: SPAHPSILPGPAPSHQRSLSELR*MLRLTG
Trigger: CCCCGTCAGCCTCAACATCAACCTCAACTCGGACAA...GCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTCCACCTGGGGGTTGTaGTCCCGCAAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPSTWGL*SRKLEA
Trigger: GGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGA...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAATCCACCTGGGGGTTGTaGTCCCGCAAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQSTWGL*SRKLEA
Trigger: GGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGA...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGACAGGCGAAGATGAAGTaGCCCAGCGTGTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PILLPLHTSTAVWAALRGQAKMK*PSVSSS
Trigger: GGAGGAGGACACGCTGGGCAACTTCATCTTCGCCTG...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp AGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGTTGCAGGAGACCTGGTaGAAGCGGCAGGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: RKPCTSFNLARASTLPPELQETW*KRQAKM
Trigger: CATCTTCGCCTGCCGCTTCAACCAGGTCTCCTGCAA...CTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp GCTCCACTGGCTGCCCAGGTTGGACAGGAGGGTGACCATCGTGACAGAGGGAGAGCACAGCCACACTCCTaGATCATGCTCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: APLAAQVGQEGDHRDRGRAQPHS*IMLSWK
Trigger: CTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTGC...TCTCCCTCTGTCACGATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CAA 90 bp GCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCGCACAGCCACACTCCTaGATCATGCTCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ASPPHINGSLGGSERKPCAQPHS*IMLSWK
Trigger: CTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTGC...GCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCCACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GGETRVFRGSTKGYRAGAHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 5 (lower is better)
Translates to: GGSERKPCTSFNLARASTEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...GGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp AGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 5 (lower is better)
Translates to: SPAHPSILPGPAPSHQRSEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...GCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS GCA 90 bp GCCGAATTGCCAGTACATCATGCCAAAGGTGCAGAGCCACAGCACTaGCCAGAAGGCCGTCTTCATGCGGTTGTGCTGGGAGCACACCAG +
Preference number: 5 (lower is better)
Translates to: AELPVHHAKGAEPQH*PEGRLHAVVLGAHQ
Trigger: CTGGTGTGCTCCCAGCACAACCGCATGAAGACGGCCTTCTGGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGTACTGGCAATTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000542260.1
ENST00000542436.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
CDS-3UTR CAA 90 bp TCCTGCCCGTGCACCATTACCCGGGCCCCAGTCACTGTGGACAGCAGGGGAATGTGGATGGTGGTGTTGTaGCAGAAGAACTCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SCPCTITRAPVTVDSRGMWMVVL*QKNSKS
Trigger: GCTCTTCGAGTTCTTCTGCAACAACACCACCATCCA...CATTCCCCTGCTGTCCACAGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR CAA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTGTCCGAGTTGAGGTaGATGTTGAGGCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: PPHINGSLGGSERKPCTSLSELR*MLRLTG
Trigger: CCCCGTCAGCCTCAACATCAACCTCAACTCGGACAA...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp GCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACGAGCTTGTCCGAGTaGAGGTTGATGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ASPPHINGSLGGSERKPCTSLSE*RLMLRL
Trigger: CAGCCTCAACATCAACCTCAACTCGGACAAGCTCGT...GCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp ACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGTTGCAGGAGACCTGGTaGAAGCGGCAGGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: THLASPPHINGSLGGSERLQETW*KRQAKM
Trigger: CATCTTCGCCTGCCGCTTCAACCAGGTCTCCTGCAA...CCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp TTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTTTGCAGGAGACCTGGTaGAAGCGGCAGGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: FNLARASTLPPEEHLPWCLQETW*KRQAKM
Trigger: CATCTTCGCCTGCCGCTTCAACCAGGTCTCCTGCAA...ACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp AGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGGCACAGCCACACTCCTaGATCATGCTCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: RGSPAHPSILPGPAPSHQAQPHS*IMLSWK
Trigger: CTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTGC...CTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp TGGCCAGGCCAGTCGGGGGCTGGCTTAAGCCGTCGCTGGGCAGGAAACCCGTGCAAGAAGATGTTGACTTaGGCCACTCCATTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: WPGQSGAGLSRRWAGNPCKKMLT*ATPFLL
Trigger: CAAGAGAAATGGAGTGGCCAAAGTCAACATCTTCTT...GCACGGGTTTCCTGCCCAGCGACGGCTTAAGCCAGCCCCCGACTGGCCTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: SERKPCTSFNLARASTLPHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp ACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGCACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: THLASPPHINGSLGGSERHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...CCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 5 (lower is better)
Translates to: GGETRVFRGSTKGYRAGAEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCCATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: AALRGSPAHPSILPGPAPHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS CCA 90 bp GATGAAGTTGCCCAGCGTGTCCTCCTCCAGGGATGGCAGAGTCTCTaGCAGCCTCGACAGGATGTTGATGTAGTGGAAGCGGTACCACTC +
Preference number: 5 (lower is better)
Translates to: DEVAQRVLLQGWQSL*QPRQDVDVVEAVPL
Trigger: GAGTGGTACCGCTTCCACTACATCAACATCCTGTCGAGGCTGCCAGAGACTCTGCCATCCCTGGAGGAGGACACGCTGGGCAACTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS-3UTR CAA 90 bp GCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTGGATGGTGGTGTTGTaGCAGAAGAACTCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: AALRGSPAHPSILPGPAPWMVVL*QKNSKS
Trigger: GCTCTTCGAGTTCTTCTGCAACAACACCACCATCCA...GGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp ACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGTTGTCCGAGTTGAGGTaGATGTTGAGGCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: THLASPPHINGSLGGSERLSELR*MLRLTG
Trigger: CCCCGTCAGCCTCAACATCAACCTCAACTCGGACAA...CCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp TTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACGAGCTTGTCCGAGTaGAGGTTGATGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LGGSERKPCTSFNLARASTSLSE*RLMLRL
Trigger: CAGCCTCAACATCAACCTCAACTCGGACAAGCTCGT...GCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp TGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCAACGAGCTTGTCCGAGTaGAGGTTGATGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WAALRGSPAHPSILPGPATSLSE*RLMLRL
Trigger: CAGCCTCAACATCAACCTCAACTCGGACAAGCTCGT...TGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp AGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGAGCTCAGCCATCTCCCAGTCCACCTGGGGGTaGTTGTCCCGCAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SSMRNMMTSRSKTSSAISQSTWG*LSRKLE
Trigger: CTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTG...GGAGATGGCTGAGCTCGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CAA 90 bp AGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGGACAGACCGTTGTaGATTCCAGGCATGGAAGAC +
Preference number: 5 (lower is better)
Translates to: RGSPAHPSILPGPAPSHQRDRPL*IPGMED
Trigger: GTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCT...CTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCAGGGACAGACCGTTGTaGATTCCAGGCATGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LASPPHINGSLGGSERKPRDRPL*IPGMED
Trigger: GTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCT...GGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGCACTGGCTGCCCAGGTaGGACAGGAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: AKALLGSFISYCSWSNFLHWLPR*DRRVTI
Trigger: GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTG...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGAGCCCCGGAGTGGATaGGGGAGAGCAAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFEPRSG*GRARVR
Trigger: CCTGACCCTTGCTCTCCCCAATCCACTCCGGGGCTC...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS-3UTR CAA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACAAGGGAACCCGGAACTaGTCTGCCCTTTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHKGTRN*SALSQR
Trigger: TCTTTGGGAAAGGGCAGACAAGTTCCGGGTTCCCTT...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR CAA 90 bp AGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGGAGAGTAATTCCTGGTaGAAGCGGCAGGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: RGSPAHPSILPGPAPSHQESNSW*KRQAKM
Trigger: CATCTTCGCCTGCCGCTTCAACCAGGAATTACTCTC...CTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS-3UTR CAA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGGCGGGGAAGACGAGCTaGTCCGAGTTGAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGAGKTS*SELRLM
Trigger: CATCAACCTCAACTCGGACAAGCTCGTCTTCCCCGC...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGGCGGGGAAGACGAGCTaGTCCGAGTTGAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: STAVWAALRGSPAHPSILAGKTS*SELRLM
Trigger: CATCAACCTCAACTCGGACAAGCTCGTCTTCCCCGC...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCAGTCCACCTGGGGGTaGTTGTCCCGCAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPEQSTWG*LSRKLE
Trigger: CTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTG...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTCAGGCGAAGATGAAGTaGCCCAGCGTGTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ALLGSFISYCSWSNFLSPQAKMK*PSVSSS
Trigger: GGAGGAGGACACGCTGGGCAACTTCATCTTCGCCTG...AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGGGCAGATCAGGGACAGACCGTaGTTGATTCCAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: VQRQYQGVQGWSQGTSGQIRDRP*LIPGME
Trigger: TTCCATGCCTGGAATCAACAACGGTCTGTCCCTGAT...CTGCCCAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp AACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTCACTGGCTGCCCAGGTaGGACAGGAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: NFLSPYPSCFPSTHQRQFHWLPR*DRRVTI
Trigger: GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTG...AAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: LREPRRRRSDQFWGRQDVAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...CACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGCACATCAACGGCAGTTaGGGCGGCTCTGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWHINGS*GGSERK
Trigger: CTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: LSPYPSCFPSTHQRQFGRHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...CCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGCATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: PLPILLPLHTSTAVWAALHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...CAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCAGCTCCAAGTTTCGCTaGGCTGATCCAAGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: ASPPHINGSLGGSERKPCSSKFR*ADPREK
Trigger: TTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCT...GCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGTGCGTGTACCCTTGGTaGTGTTTTGTCCTGGTTATC +
Preference number: 5 (lower is better)
Translates to: GSPAHPSILPGPAPSHQRCVYPW*CFVLVI
Trigger: GATAACCAGGACAAAACACAACCAAGGGTACACGCA...CCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS GCA 90 bp ACTCTCCGAAAAGCAGGCCGAATTGCCAGTACATCATGCCAAAGGTaGAGAGCCACAGCACTGCCCAGAAGGCCGTCTTCATGCGGTTGT +
Preference number: 5 (lower is better)
Translates to: TLRKAGRIASTSCQR*RATALPRRPSSCGC
Trigger: ACAACCGCATGAAGACGGCCTTCTGGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGTACTGGCAATTCGGCCTGCTTTTCGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000542260.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
CDS GCA 90 bp GGCCGCAAGTTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGGGCCCCAGTCACGTTGTTGATTCCA +
Preference number: 5 (lower is better)
Translates to: GRKLKPPSSIKAGSS*PCTITRAPVTLLIP
Trigger: TGGAATCAACAACGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAACTTGCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541249.5
CDS-3UTR CAA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCATGGATGGTGGTGTTGTaGCAGAAGAACTCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SERKPCTSFNLARASTLPWMVVL*QKNSKS
Trigger: GCTCTTCGAGTTCTTCTGCAACAACACCACCATCCA...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp GGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCGAAAAGCAGGCCGAATaGCCAGTACATCATGCCAAA +
Preference number: 5 (lower is better)
Translates to: GGETRVFRGSTKGYRAGAEKQAE*PVHHAK
Trigger: TTTGGCATGATGTACTGGCAATTCGGCCTGCTTTTC...GGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CAA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACACGAGCTTGTCCGAGTaGAGGTTGATGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHTSLSE*RLMLRL
Trigger: CAGCCTCAACATCAACCTCAACTCGGACAAGCTCGT...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CAA 90 bp CCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCATCAGGGACAGACCGTaGTTGATTCCAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: PHINGSLGGSERKPCTSFIRDRP*LIPGME
Trigger: TTCCATGCCTGGAATCAACAACGGTCTGTCCCTGAT...GAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAATCAGGGACAGACCGTaGTTGATTCCAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: PILLPLHTSTAVWAALRGIRDRP*LIPGME
Trigger: TTCCATGCCTGGAATCAACAACGGTCTGTCCCTGAT...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CTTGGTGCAGTCGCCATAATCGCCCCCAAGTCTGTCCAGGGTTTCCTTCCTCATGCACAGCCACACTCCTaGATCATGCTCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LGAVAIIAPKSVQGFLPHAQPHS*IMLSWK
Trigger: CTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTGC...ATGAGGAAGGAAACCCTGGACAGACTTGGGGGCGATTATGGCGACTGCACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR CAA 90 bp AGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGCTCCAAGTTTCGCTaGGCTGATCCAAGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: RGSPAHPSILPGPAPSHQSSKFR*ADPREK
Trigger: TTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCT...CTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGTGCCTGCGTGTACCCTaGGTTGTGTTTTGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LTHLASPPHINGSLGGSECLRVP*VVFCPG
Trigger: ACCAGGACAAAACACAACCAAGGGTACACGCAGGCA...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp CTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTCCAGCTTGTTCCCCTaGATACTGCTCATGATACCT +
Preference number: 5 (lower is better)
Translates to: LQSCQGQHPPTRGASALVSSLFP*ILLMIP
Trigger: AGGTATCATGAGCAGTATCAAGGGGAACAAGCTGGA...CACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543768.1
CDS TCA 90 bp CACGCTGCATGGCTTCCGGCACTTGGTGAAACAGCCCAGGTGGTCTaGGGAGAAGTCAACCTGGAGCTTATAGTAGCAGTACCCATTCTC +
Preference number: 5 (lower is better)
Translates to: HAAWLPALGETAQVV*GEVNLELIVAVPIL
Trigger: GAGAATGGGTACTGCTACTATAAGCTCCAGGTTGACTTCTCCTCAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATGCAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457871.2
CDS-3UTR CAA 90 bp TCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCAGAAAAGCAGGCCGAATaGCCAGTACATCATGCCAAA +
Preference number: 5 (lower is better)
Translates to: SERKPCTSFNLARASTLPEKQAE*PVHHAK
Trigger: TTTGGCATGATGTACTGGCAATTCGGCCTGCTTTTC...TGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp CTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACGAAGACATCCAGAGGTaGGAGTTGTTCTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: LRGSPAHPSILPGPAPSHEDIQR*ELFLSL
Trigger: CAATGACAAGAACAACTCCAACCTCTGGATGTCTTC...GTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAAGGGACAGACCGTTGTaGATTCCAGGCATGGAAGAC +
Preference number: 5 (lower is better)
Translates to: REPRRRRSDQFWGRQDVARDRPL*IPGMED
Trigger: GTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCT...TGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAAGGGACAGACCGTTGTaGATTCCAGGCATGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LPILLPLHTSTAVWAALRRDRPL*IPGMED
Trigger: GTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCT...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCAGGGACAGACCGTaGTTGATTCCAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: HTSTAVWAALRGSPAHPSIRDRP*LIPGME
Trigger: TTCCATGCCTGGAATCAACAACGGTCTGTCCCTGAT...TGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp TGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCTGCTGTGTGTACTTaGAAGGGTAAAGGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: WAALRGSPAHPSILPGPAPAVCT*KGKGSQ
Trigger: TTGAGAACCTTTACCCTTCAAAGTACACACAGCAGG...TGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp AGGGTAAAGGTTCTCAACAGGAACATCACTGCCATTCTTGGTGCAGTCGCCATACACTGGCTGCCCAGGTaGGACAGGAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: RVKVLNRNITAILGAVAIHWLPR*DRRVTI
Trigger: GATGGTCACCCTCCTGTCCAACCTGGGCAGCCAGTG...TATGGCGACTGCACCAAGAATGGCAGTGATGTTCCTGTTGAGAACCTTTACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR CAA 90 bp GCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 5 (lower is better)
Translates to: ALLGSFISYCSWSNFLSPEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAATGCCTGCGTGTACCCTaGGTTGTGTTTTGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQCLRVP*VVFCPG
Trigger: ACCAGGACAAAACACAACCAAGGGTACACGCAGGCA...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS GCA 90 bp AAGTTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCAGTCACGTTGTTGATTCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: KLKPPSSIKAGSSCP*TITRAPVTLLIPGM
Trigger: CATGCCTGGAATCAACAACGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541249.5
CDS-3UTR CAA 90 bp CACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATTGGATGGTGGTGTTGTaGCAGAAGAACTCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: HINGSLGGSERKPCTSFNWMVVL*QKNSKS
Trigger: GCTCTTCGAGTTCTTCTGCAACAACACCACCATCCA...ATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp AAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGATCCACCTGGGGGTTGTaGTCCCGCAAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: KFLVKAPSFAWLIQGKKRSTWGL*SRKLEA
Trigger: GGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGA...TCTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp AGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAGTCCACCTGGGGGTaGTTGTCCCGCAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SGFLGKFLVKAPSFAWLIQSTWG*LSRKLE
Trigger: CTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTG...GATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGAAGCCCTGCACATCCTTCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGATCCAGAGGTTGGAGTaGTTCTTGTCATTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: GSPAHPSILPGPAPSHQRIQRLE*FLSLKV
Trigger: TACTTTCAATGACAAGAACAACTCCAACCTCTGGAT...CCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGCAGGGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAGAAGACATCCAGAGGTaGGAGTTGTTCTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: PILLPLHTSTAVWAALRGEDIQR*ELFLSL
Trigger: CAATGACAAGAACAACTCCAACCTCTGGATGTCTTC...TCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGATCAGGGACAGACCGTaGTTGATTCCAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWIRDRP*LIPGME
Trigger: TTCCATGCCTGGAATCAACAACGGTCTGTCCCTGAT...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GCCTGGAGACCAGTATCGGCTTCGGAACCTTCGGAGCAGCATGAGGAACATGATATCAGGGACAGACCGTaGTTGATTCCAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: AWRPVSASEPSEQHEEHDIRDRP*LIPGME
Trigger: TTCCATGCCTGGAATCAACAACGGTCTGTCCCTGAT...ATCATGTTCCTCATGCTGCTCCGAAGGTTCCGAAGCCGATACTGGTCTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CAA 90 bp ACATTTATTGAGCTCCTGCCTACTTGCTCCAAGCAGGATGATGGGCTAGACATGCATGGCTTCCGGCACTaGGTGAAACAGCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TFIELLPTCSKQDDGLDMHGFRH*VKQPRW
Trigger: CCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATG...CATGTCTAGCCCATCATCCTGCTTGGAGCAAGTAGGCAGGAGCTCAATAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAAGCACATCCTTCAATCTaGCCAGGGCCAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQAHPSI*PGPAPS
Trigger: GGAGGGTGCTGGCCCTGGCAAGATTGAAGGATGTGC...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGCATCAGCTACTGTTCTaGGAGCAACTTCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: AKALLGSFISYCSWSNFLHQLLF*EQLPEP
Trigger: GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATG...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACACCCTTGGTTGTGTTTaGTCCTGGTTATCAGCGGTT +
Preference number: 5 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHTLGCV*SWLSAV
Trigger: AACCGCTGATAACCAGGACAAAACACAACCAAGGGT...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp TATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGCCGTCTTCATGCGGTaGTGCTGGGAGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: YQRFLRKVPCQSSKFRLAAVFMR*CWEHTR
Trigger: CCTGGTGTGCTCCCAGCACAACCGCATGAAGACGGC...AGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CAA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGGAAAAGCAGGCCGAATaGCCAGTACATCATGCCAAA +
Preference number: 5 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGEKQAE*PVHHAK
Trigger: TTTGGCATGATGTACTGGCAATTCGGCCTGCTTTTC...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp GGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCGAAAAGCAGGCCGAATaGCCAGTACATCATGCCAAA +
Preference number: 5 (lower is better)
Translates to: GTSGQLHQLLFLEQLPEPEKQAE*PVHHAK
Trigger: TTTGGCATGATGTACTGGCAATTCGGCCTGCTTTTC...GGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CAA 90 bp TTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGAAAAGCAGGCCGAATaGCCAGTACATCATGCCAAA +
Preference number: 5 (lower is better)
Translates to: LPILLPLHTSTAVWAALREKQAE*PVHHAK
Trigger: TTTGGCATGATGTACTGGCAATTCGGCCTGCTTTTC...TCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000543768.1
CDS-3UTR CAA 90 bp GTTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTGCCCGTGCACCATTACTTGTCCGAGTTGAGGTaGATGTTGAGGCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: VKATIIHKGRFILPVHHYLSELR*MLRLTG
Trigger: CCCCGTCAGCCTCAACATCAACCTCAACTCGGACAA...GTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR CAA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCAGGCGAAGATGAAGTaGCCCAGCGTGTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADQAKMK*PSVSSS
Trigger: GGAGGAGGACACGCTGGGCAACTTCATCTTCGCCTG...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp TCAATCTTGCCAGGGCCAGCACCCTCCCACCAGAGGAGCATCTGCCTTGGTGTGATCCAGAGGTTGGAGTaGTTCTTGTCATTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: SILPGPAPSHQRSICLGVIQRLE*FLSLKV
Trigger: TACTTTCAATGACAAGAACAACTCCAACCTCTGGAT...CACACCAAGGCAGATGCTCCTCTGGTGGGAGGGTGCTGGCCCTGGCAAGATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCATCCAGAGGTTGGAGTaGTTCTTGTCATTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: PPHINGSLGGSERKPCTSIQRLE*FLSLKV
Trigger: TACTTTCAATGACAAGAACAACTCCAACCTCTGGAT...GGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp AAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACGAAGACATCCAGAGGTaGGAGTTGTTCTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: KPECSEAVPRGTGLEPRHEDIQR*ELFLSL
Trigger: CAATGACAAGAACAACTCCAACCTCTGGATGTCTTC...GTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp AGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAGCCAAGGCACTTCTGCCTGCTGTGTGTACTTaGAAGGGTAAAGGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: RVFRGSTKGYRAGAKALLPAVCT*KGKGSQ
Trigger: TTGAGAACCTTTACCCTTCAAAGTACACACAGCAGG...CAGAAGTGCCTTGGCTCCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGCCTGCTGTGTGTACTTaGAAGGGTAAAGGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LTHLASPPHINGSLGGSEPAVCT*KGKGSQ
Trigger: TTGAGAACCTTTACCCTTCAAAGTACACACAGCAGG...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GTTGGGTGGGGAAACCAGAGTGTTCAGAGGCAGTACCAAGGGGTACAGGGCTGGAAGAAGATGTTGACTTaGGCCACTCCATTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: VGWGNQSVQRQYQGVQGWKKMLT*ATPFLL
Trigger: CAAGAGAAATGGAGTGGCCAAAGTCAACATCTTCTT...CCAGCCCTGTACCCCTTGGTACTGCCTCTGAACACTCTGGTTTCCCCACCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp ACGCTGCATGGCTTCCGGCACTTGGTGAAACAGCCCAGGTGGTCTGAGGAGAAGAAGAAGATGTTGACTTaGGCCACTCCATTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: TLHGFRHLVKQPRWSEEKKKMLT*ATPFLL
Trigger: CAAGAGAAATGGAGTGGCCAAAGTCAACATCTTCTT...CTTCTCCTCAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATGCAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS-3UTR CAA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGACCCTTGGTTGTGTTTaGTCCTGGTTATCAGCGGTT +
Preference number: 5 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGTLGCV*SWLSAV
Trigger: AACCGCTGATAACCAGGACAAAACACAACCAAGGGT...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS TCA 90 bp TCTAGTCCAGGCTCCTCTCACCAGGCCATCTGGGTTCACCGGCATTaGCTTCCGTGCTGCCTTGTAACTTCTCTCTTGTTGCATTACAAA +
Preference number: 5 (lower is better)
Translates to: SSPGSSHQAIWVHRH*LPCCLVTSLLLHYK
Trigger: TTTGTAATGCAACAAGAGAGAAGTTACAAGGCAGCACGGAAGTCAATGCCGGTGAACCCAGATGGCCTGGTGAGAGGAGCCTGGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536087.1
CDS GCA 90 bp ACGAGAGTGGTGAAGGAGCTGTATTTGTACAGGTCAAAGAGCGTCTaGTCTGTGATGCGGTCCAGCTCCTCCAGCTCCTCTTTAATTTCC +
Preference number: 5 (lower is better)
Translates to: TRVVKELYLYRSKSV*SVMRSSSSSSSLIS
Trigger: GGAAATTAAAGAGGAGCTGGAGGAGCTGGACCGCATCACAGAGCAGACGCTCTTTGACCTGTACAAATACAGCTCCTTCACCACTCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
ENST00000544882.1
CDS-3UTR CAA 90 bp CAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATGCGGGGAAGACGAGCTaGTCCGAGTTGAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: QRFLRKVPCQSSKFRLADAGKTS*SELRLM
Trigger: CATCAACCTCAACTCGGACAAGCTCGTCTTCCCCGC...ATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CAA 90 bp GGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGCCAGGATCCAGAGGTTGGAGTaGTTCTTGTCATTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: GSLGGSERKPCTSFNLARIQRLE*FLSLKV
Trigger: TACTTTCAATGACAAGAACAACTCCAACCTCTGGAT...CCTGGCAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCAAGGGACAGACCGTTGTaGATTCCAGGCATGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GEGGVINFGEDKMWQKRSRDRPL*IPGMED
Trigger: GTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCT...TGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp TTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCCTGCTGTGTGTACTTaGAAGGGTAAAGGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: FLSPYPSCFPSTHQRQFGPAVCT*KGKGSQ
Trigger: TTGAGAACCTTTACCCTTCAAAGTACACACAGCAGG...CCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGCCTGCTGTGTGTACTTaGAAGGGTAAAGGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LPEPLPILLPLHTSTAVWPAVCT*KGKGSQ
Trigger: TTGAGAACCTTTACCCTTCAAAGTACACACAGCAGG...CCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACAAGCACAGCCACACTCCTaGATCATGCTCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: EGGVINFGEDKMWQKRSQAQPHS*IMLSWK
Trigger: CTTCCAGGAGAGCATGATCAAGGAGTGTGGCTGTGC...TTGTGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp GTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCCATGGCTTCCGGCACTaGGTGAAACAGCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VFCPGYQRFLRKVPCQSSHGFRH*VKQPRW
Trigger: CCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATG...GGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGTCCTTGAAGAAGATGTaGACTTTGGCCACTCCATTT +
Preference number: 5 (lower is better)
Translates to: LTHLASPPHINGSLGGSESLKKM*TLATPF
Trigger: AAATGGAGTGGCCAAAGTCAACATCTTCTTCAAGGA...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGCCCTAGCTCCAAGTTTCGCTaGGCTGATCCAAGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: ALLGSFISYCSWSNFLSPSSKFR*ADPREK
Trigger: TTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCT...AGGGCTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCATGGATGGTGGTGTTGTaGCAGAAGAACTCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GEGGVINFGEDKMWQKRSWMVVL*QKNSKS
Trigger: GCTCTTCGAGTTCTTCTGCAACAACACCACCATCCA...TGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228916.7
ENST00000360168.7
CDS-3UTR CAA 90 bp CTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTGGGCGGCTCTGAGATCCAGAGGTTGGAGTaGTTCTTGTCATTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: LTHLASPPHINGSLGGSEIQRLE*FLSLKV
Trigger: TACTTTCAATGACAAGAACAACTCCAACCTCTGGAT...CTCAGAGCCGCCCAAACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTGAAGACATCCAGAGGTaGGAGTTGTTCTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: QLPEPLPILLPLHTSTAVEDIQR*ELFLSL
Trigger: CAATGACAAGAACAACTCCAACCTCTGGATGTCTTC...AACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp TCAACGGCAGTTTGGGCGGCTCTGAGAGGAAGCCCTGCACATCCTTCAATCTTGAAGAAGATGTTGACTTaGGCCACTCCATTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: STAVWAALRGSPAHPSILKKMLT*ATPFLL
Trigger: CAAGAGAAATGGAGTGGCCAAAGTCAACATCTTCTT...CAAGATTGAAGGATGTGCAGGGCTTCCTCTCAGAGCCGCCCAAACTGCCGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp GGCTGGAGCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAATCCTTGAAGAAGATGTaGACTTTGGCCACTCCATTT +
Preference number: 5 (lower is better)
Translates to: GWSQGTSGQLHQLLFLEQSLKKM*TLATPF
Trigger: AAATGGAGTGGCCAAAGTCAACATCTTCTTCAAGGA...TTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGCTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp AGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCGAGCCCTTACCCATCTaGCTTCCCCTCCACACATCA +
Preference number: 5 (lower is better)
Translates to: SGFLGKFLVKAPSFAWLIEPLPI*LPLHTS
Trigger: TGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTC...GATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp TGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGCTCCAAGTTTCGCTaGGCTGATCCAAGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: CYSVLREPRRRRSDQFWGSSKFR*ADPREK
Trigger: TTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCT...TCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp CAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGAGACCCTTGGTTGTGTTTaGTCCTGGTTATCAGCGGTT +
Preference number: 5 (lower is better)
Translates to: QGTSGQLHQLLFLEQLPETLGCV*SWLSAV
Trigger: AACCGCTGATAACCAGGACAAAACACAACCAAGGGT...CTCAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp GTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCTTGTCCGAGTTGAGGTaGATGTTGAGGCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: VFCPGYQRFLRKVPCQSSLSELR*MLRLTG
Trigger: CCCCGTCAGCCTCAACATCAACCTCAACTCGGACAA...GGAGCTTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CAA 90 bp AGCAGCATGAGGAACATGATGACCAGCAGGTCAAAGACGAGCTCAGCCATCTCCAAGAAGATGTTGACTTaGGCCACTCCATTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: SSMRNMMTSRSKTSSAISKKMLT*ATPFLL
Trigger: CAAGAGAAATGGAGTGGCCAAAGTCAACATCTTCTT...GGAGATGGCTGAGCTCGTCTTTGACCTGCTGGTCATCATGTTCCTCATGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338748.9
ENST00000396966.6
CDS-3UTR CAA 90 bp CAACTTCCTGAGCCCTTACCCATCTTGCTTCCCCTCCACACATCAACGGCAGTTTCCTTGAAGAAGATGTaGACTTTGGCCACTCCATTT +
Preference number: 5 (lower is better)
Translates to: QLPEPLPILLPLHTSTAVSLKKM*TLATPF
Trigger: AAATGGAGTGGCCAAAGTCAACATCTTCTTCAAGGA...AACTGCCGTTGATGTGTGGAGGGGAAGCAAGATGGGTAAGGGCTCAGGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
CDS-3UTR CAA 90 bp CTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGTCCTTGAAGAAGATGTaGACTTTGGCCACTCCATTT +
Preference number: 5 (lower is better)
Translates to: LREPRRRRSDQFWGRQDVSLKKM*TLATPF
Trigger: AAATGGAGTGGCCAAAGTCAACATCTTCTTCAAGGA...CACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS GCA 90 bp CCATTCCTAGGAAAGAATGGGGGTGTCATCAAGGTCACTCCCATATaGTTCAGGCTTACAGGGATAGGGTTGTGTCAAACACACTCATAC +
Preference number: 5 (lower is better)
Translates to: PFLGKNGGVIKVTPI*FRLTGIGLCQTHSY
Trigger: GTATGAGTGTGTTTGACACAACCCTATCCCTGTAAGCCTGAAGCATATGGGAGTGACCTTGATGACACCCCCATTCTTTCCTAGGAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539953.1
CDS-3UTR CAA 90 bp GCCAAGGCACTTCTGGGCAGCTTCATCAGCTACTGTTCTTGGAGCAACTTCCTGATCCAGAGGTTGGAGTaGTTCTTGTCATTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: AKALLGSFISYCSWSNFLIQRLE*FLSLKV
Trigger: TACTTTCAATGACAAGAACAACTCCAACCTCTGGAT...CAGGAAGTTGCTCCAAGAACAGTAGCTGATGAAGCTGCCCAGAAGTGCCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp AGATGTTATAGTGTGCTACGGGAGCCCAGGAGAAGGCGGAGTGATCAATTTTGGGAAGACATCCAGAGGTaGGAGTTGTTCTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: RCYSVLREPRRRRSDQFWEDIQR*ELFLSL
Trigger: CAATGACAAGAACAACTCCAACCTCTGGATGTCTTC...CCAAAATTGATCACTCCGCCTTCTCCTGGGCTCCCGTAGCACACTATAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp AAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAAAAGAGAGGGACAGACCGTTGTaGATTCCAGGCATGGAAGAC +
Preference number: 5 (lower is better)
Translates to: KVPCQSSKFRLADPREKERDRPL*IPGMED
Trigger: GTCTTCCATGCCTGGAATCAACAACGGTCTGTCCCT...CTCTTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp GGAGAAGGCGGAGTGATCAATTTTGGGGAAGACAAGATGTGGCAGAAGCGTTCACCTGCTGTGTGTACTTaGAAGGGTAAAGGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: GEGGVINFGEDKMWQKRSPAVCT*KGKGSQ
Trigger: TTGAGAACCTTTACCCTTCAAAGTACACACAGCAGG...TGAACGCTTCTGCCACATCTTGTCTTCCCCAAAATTGATCACTCCGCCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp CTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGGGAAACTGTGGACTGTTTATaGAAGGAGAGAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LRKVPCQSSKFRLADPRETVDCL*KERGRR
Trigger: CCTCCTGCCTCTCTCCTTCAATAAACAGTCCACAGT...TTCCCTTGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS CCA 90 bp GGAGGCTTGATACTGCTCATGATACCTCCCCTTGGAAGGGACAGCTaGATTTTTCTTCATTGTCCTAATGAAGAAACTGACCCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: GGLILLMIPPLGRDS*IFLHCPNEETDPSQ
Trigger: TTGGGAAGGGTCAGTTTCTTCATTAGGACAATGAAGAAAAATCCAGCTGTCCCTTCCAAGGGGAGGTATCATGAGCAGTATCAAGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545605.1
CDS-3UTR CAA 90 bp ACATTTATTGAGCTCCTGCCTACTTGCTCCAAGCAGGATGATGGGCTAGACATGGAAGACATCCAGAGGTaGGAGTTGTTCTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: TFIELLPTCSKQDDGLDMEDIQR*ELFLSL
Trigger: CAATGACAAGAACAACTCCAACCTCTGGATGTCTTC...CATGTCTAGCCCATCATCCTGCTTGGAGCAAGTAGGCAGGAGCTCAATAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp CGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCAAGCTCCAAGTTTCGCTaGGCTGATCCAAGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: RFLRKVPCQSSKFRLADPSSKFR*ADPREK
Trigger: TTTTTCCCTTGGATCAGCCAAGCGAAACTTGGAGCT...TGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp TTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAACGAGCTTGTCCGAGTaGAGGTTGATGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LVVFCPGYQRFLRKVPCQTSLSE*RLMLRL
Trigger: CAGCCTCAACATCAACCTCAACTCGGACAAGCTCGT...TTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
CDS-3UTR CAA 90 bp GTACCCTTGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGCGTGTACCCTTGGTaGTGTTTTGTCCTGGTTATC +
Preference number: 5 (lower is better)
Translates to: VPLVVFCPGYQRFLRKVPCVYPW*CFVLVI
Trigger: GATAACCAGGACAAAACACAACCAAGGGTACACGCA...AGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCAAGGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS CCA 90 bp CTTACCTTGATACTGCTCATGATACCTCCCCTTGGAAGGGACAGCTaGATTTTTCTTCATTGTCCTAATGAAGAAACTGACCCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: LTLILLMIPPLGRDS*IFLHCPNEETDPSQ
Trigger: TTGGGAAGGGTCAGTTTCTTCATTAGGACAATGAAGAAAAATCCAGCTGTCCCTTCCAAGGGGAGGTATCATGAGCAGTATCAAGGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538957.1
CDS-3UTR CAA 90 bp CGGTTTCTTAGGAAAGTTCCTTGTCAAAGCTCCAAGTTTCGCTTGGCTGATCCATCCTTGAAGAAGATGTaGACTTTGGCCACTCCATTT +
Preference number: 5 (lower is better)
Translates to: RFLRKVPCQSSKFRLADPSLKKM*TLATPF
Trigger: AAATGGAGTGGCCAAAGTCAACATCTTCTTCAAGGA...TGGATCAGCCAAGCGAAACTTGGAGCTTTGACAAGGAACTTTCCTAAGAAACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
CDS-3UTR CAA 90 bp TGGTTGTGTTTTGTCCTGGTTATCAGCGGTTTCTTAGGAAAGTTCCTTGTCAAATGCGTGTACCCTTGGTaGTGTTTTGTCCTGGTTATC +
Preference number: 5 (lower is better)
Translates to: WLCFVLVISGFLGKFLVKCVYPW*CFVLVI
Trigger: GATAACCAGGACAAAACACAACCAAGGGTACACGCA...TTTGACAAGGAACTTTCCTAAGAAACCGCTGATAACCAGGACAAAACACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS-3UTR CAA 90 bp TACAGTCTAGTTGGGAAGGGAGACACAAATGTACAAGAAAGTATGGTGCAACAGAAGAAGATGTTGACTTaGGCCACTCCATTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: YSLVGKGDTNVQESMVQQKKMLT*ATPFLL
Trigger: CAAGAGAAATGGAGTGGCCAAAGTCAACATCTTCTT...CTGTTGCACCATACTTTCTTGTACATTTGTGTCTCCCTTCCCAACTAGACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000540037.5
CDS CCA 72 bp GGAGGCCGGTCCATCCCGGAGAAGCCTGGGCGGGGCTaGGGTCGTCGTGGCGCCTCCTGGCCGTCCGGCGGT +
Preference number: 6 (lower is better)
Translates to: GGRSIPEKPGRG*GRRGASWPSGG
Trigger: ACCGCCGGACGGCCAGGAGGCGCCACGACGACCCCAGCCCCGCCCAGGCTTCTCCGGGATGGACCGGCCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS TCA 72 bp AAGCTGGAGGCCACGCTACGGGCTCGACGGGCCCCGTaGGGCGGGGGCGGGACCCTCAGGCGCTGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: KLEATLRARRAP*GGGGTLRRCKG
Trigger: CCCCTTGCAGCGCCTGAGGGTCCCGCCCCCGCCTCACGGGGCCCGTCGAGCCCGTAGCGTGGCCTCCAGCTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS CCA 72 bp AACTCGATCAGGGCCTCCTCCTCCGCCGTGGGCTGCTaGGGCGCCGCAGGTTCGGGGCCCAGCCCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: NSIRASSSAVGC*GAAGSGPSPCS
Trigger: GGAGCAGGGGCTGGGCCCCGAACCTGCGGCGCCCCAGCAGCCCACGGCGGAGGAGGAGGCCCTGATCGAGTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000538957.1
ENST00000542260.1
ENST00000542436.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
ENST00000545605.1
CDS CCA 72 bp AGCGGTGGAACTCGATCAGGGCCTCCTCCTCCGCCGTaGGCTGCTGGGGCGCCGCAGGTTCGGGGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: SGGTRSGPPPPP*AAGAPQVRGPA
Trigger: GGCTGGGCCCCGAACCTGCGGCGCCCCAGCAGCCCACGGCGGAGGAGGAGGCCCTGATCGAGTTCCACCGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000538957.1
ENST00000542260.1
ENST00000542436.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
CDS TCA 72 bp CTGGGGTCGTCGTGGCGCCTCCTGGCCGTCCGGCGGTaGAGGGTAAACAGGTGTGTCCGCCGGGAAGGCGGA +
Preference number: 6 (lower is better)
Translates to: LGSSWRLLAVRR*RVNRCVRREGG
Trigger: TCCGCCTTCCCGGCGGACACACCTGTTTACCCTTCACCGCCGGACGGCCAGGAGGCGCCACGACGACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS TCA 72 bp CCTTGGCGTGACCGCGGTACCCAGGTCATCCCGCCCTaGTCCCCGCAGGCGAGTGTCGGTGGCCTTTCGGCT +
Preference number: 6 (lower is better)
Translates to: PWRDRGTQVIPP*SPQASVGGLSA
Trigger: AGCCGAAAGGCCACCGACACTCGCCTGCGGGGATCAGGGCGGGATGACCTGGGTACCGCGGTCACGCCAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS TCA 72 bp CCAAAGAGGGGAAGGGTGAGGGCCTCGGCCTTGGCGTaGCCGCGGTACCCAGGTCATCCCGCCCTGATCCCC +
Preference number: 6 (lower is better)
Translates to: PKRGRVRASALA*PRYPGHPALIP
Trigger: GGGGATCAGGGCGGGATGACCTGGGTACCGCGGTCACGCCAAGGCCGAGGCCCTCACCCTTCCCCTCTTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS CCA 72 bp CCTTCCAGTCCACCTGGGGGTTGTTGTCCCGCAAGCTaGAGGCCACGCTACGGGCTCGACGGGCCCCGTGAG +
Preference number: 6 (lower is better)
Translates to: PSSPPGGCCPAS*RPRYGLDGPRE
Trigger: CTCACGGGGCCCGTCGAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTGGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS CCA 72 bp GACAGGTGCAGCGGCCTGGCTGGGGAGCCCGCCCGCTaGCCGGCCAGGGATGGAAGCGACAGGAATCTCATT +
Preference number: 6 (lower is better)
Translates to: DRCSGLAGEPAR*PARDGSDRNLI
Trigger: AATGAGATTCCTGTCGCTTCCATCCCTGGCCGGCCAGCGGGCGGGCTCCCCAGCCAGGCCGCTGCACCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536411.1
ENST00000545605.1
CDS CAA 90 bp AGCTGGAAGCCGATCTTCCAGTCCTTCCAGTCCACCTGGGGGTTGTaGTCCCGCAAGCTGGAGGCCACGCTACGGGCTCGACGGGCCCCG +
Preference number: 6 (lower is better)
Translates to: SWKPIFQSFQSTWGL*SRKLEATLRARRAP
Trigger: CGGGGCCCGTCGAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGACTGGAAGATCGGCTTCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS CAA 90 bp GGCGGAGGCCACGGCGAGCCCAGCCGGGACACTGTGGACTGTTTATaGAAGGAGAGAGGCAGGAGGCGCCTGTCGTCTGTGGGGCGCTCT +
Preference number: 6 (lower is better)
Translates to: GGGHGEPSRDTVDCL*KERGRRRLSSVGRS
Trigger: AGAGCGCCCCACAGACGACAGGCGCCTCCTGCCTCTCTCCTTCAATAAACAGTCCACAGTGTCCCGGCTGGGCTCGCCGTGGCCTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS CAA 90 bp CACAGCTGGAAGCCGATCTTCCAGTCCTTCCAGTCCACCTGGGGGTaGTTGTCCCGCAAGCTGGAGGCCACGCTACGGGCTCGACGGGCC +
Preference number: 6 (lower is better)
Translates to: HSWKPIFQSFQSTWG*LSRKLEATLRARRA
Trigger: GGCCCGTCGAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGACTGGAAGATCGGCTTCCAGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS CAA 90 bp TCCAGCTGGAAGCCGATCTTCCAGTCCTTCCAGTCCACCTGGGGGTaGTTGTCCCGCAAGCTGGAGGCCACGCTACGGGCTCGACGGGCC +
Preference number: 6 (lower is better)
Translates to: SSWKPIFQSFQSTWG*LSRKLEATLRARRA
Trigger: GGCCCGTCGAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGACTGGAAGATCGGCTTCCAGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338748.9
CDS TCA 72 bp GAGCAAGGGTCAGGGTCAAGGCTGAGCTCTGGGCCCTaGGTGCCCTCTCCCATCACCCCTGGAACCCGAGTG +
Preference number: 6 (lower is better)
Translates to: EQGSGSRLSSGP*VPSPITPGTRV
Trigger: CACTCGGGTTCCAGGGGTGATGGGAGAGGGCACTCAGGGCCCAGAGCTCAGCCTTGACCCTGACCCTTGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS CAA 90 bp TCCCTCCCTCCTCCACCTTTCCTGGAGCCAGCAGACCTGCGGGAGTaGGGGCCAAAAGTGCCGGAGCTGGGCTTCCCTAGAACGGCCTCT +
Preference number: 6 (lower is better)
Translates to: SLPPPPFLEPADLRE*GPKVPELGFPRTAS
Trigger: AGAGGCCGTTCTAGGGAAGCCCAGCTCCGGCACTTTTGGCCCCAACTCCCGCAGGTCTGCTGGCTCCAGGAAAGGTGGAGGAGGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360168.7
CDS GCA 72 bp CCTCGCCCGGACCTAGAAGGGAACCCGGAACTTGTCTaGCCTTTCCCAAAGAGGGGAAGGGTGAGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: PRPDLEGNPELV*PFPKRGRVRAS
Trigger: CGAGGCCCTCACCCTTCCCCTCTTTGGGAAAGGGCAGACAAGTTCCGGGTTCCCTTCTAGGTCCGGGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS CAA 72 bp CCGATCTTCCAGTCCTTCCAGTCCACCTGGGGGTTGTaGTCCCGCAAGCTGGAGGCCACGCTACGGGCTCGA +
Preference number: 6 (lower is better)
Translates to: PIFQSFQSTWGL*SRKLEATLRAR
Trigger: TCGAGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGACTGGAAGATCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS CAA 90 bp GCCTGGTTGCAGGAGACCTGGTTGAAGCGGCAGGCGAAGATGAAGTaGCCCAGCGTGTCCTCCTCCAGGGATGGCAGAGTCTCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: AWLQETWLKRQAKMK*PSVSSSRDGRVSGS
Trigger: GCTGCCAGAGACTCTGCCATCCCTGGAGGAGGACACGCTGGGCAACTTCATCTTCGCCTGCCGCTTCAACCAGGTCTCCTGCAACCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000541249.5
ENST00000543768.1
CDS TCA 72 bp ACGGCGAGCCCAGCCGGGACACTGTGGACTGTTTATTaGAGGAGAGAGGCAGGAGGCGCCTGTCGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: TASPAGTLWTVY*RREAGGACRLW
Trigger: CCACAGACGACAGGCGCCTCCTGCCTCTCTCCTTCAATAAACAGTCCACAGTGTCCCGGCTGGGCTCGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS GCA 72 bp TCGAGCTGTGTCCTGATTCTGTCTCTGCCCCAGGACTaGAGGGCTCCAGGAGGTCTGGGCTGCCTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: SSCVLILSLPQD*RAPGGLGCLQL
Trigger: AAGCTGGAGGCAGCCCAGACCTCCTGGAGCCCTGCAGTCCTGGGGCAGAGACAGAATCAGGACACAGCTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538979.5
ENST00000542260.1
CDS CAA 72 bp AAGCCGATCTTCCAGTCCTTCCAGTCCACCTGGGGGTaGTTGTCCCGCAAGCTGGAGGCCACGCTACGGGCT +
Preference number: 6 (lower is better)
Translates to: KPIFQSFQSTWG*LSRKLEATLRA
Trigger: AGCCCGTAGCGTGGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGACTGGAAGATCGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS CAA 72 bp CACGGCGAGCCCAGCCGGGACACTGTGGACTGTTTATaGAAGGAGAGAGGCAGGAGGCGCCTGTCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: HGEPSRDTVDCL*KERGRRRLSSV
Trigger: CACAGACGACAGGCGCCTCCTGCCTCTCTCCTTCAATAAACAGTCCACAGTGTCCCGGCTGGGCTCGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540037.5
CDS CAA 90 bp CGACGGCTGCGGGAGCCGGCCACGAGAGTGGTGAAGGAGCTGTATTaGTACAGGTCAAAGAGCGTCTGCTCTGTGATGCGGTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: RRLREPATRVVKELY*YRSKSVCSVMRSSS
Trigger: GGAGCTGGACCGCATCACAGAGCAGACGCTCTTTGACCTGTACAAATACAGCTCCTTCACCACTCTCGTGGCCGGCTCCCGCAGCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
ENST00000544882.1
CDS CCA 72 bp AGCTGGAAGCCGATCTTCCAGTCCTTCCAGTCCACCTaGGGGTTGTTGTCCCGCAAGCTGGAGGCCACGCTA +
Preference number: 6 (lower is better)
Translates to: SWKPIFQSFQST*GLLSRKLEATL
Trigger: TAGCGTGGCCTCCAGCTTGCGGGACAACAACCCCCAGGTGGACTGGAAGGACTGGAAGATCGGCTTCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS CCA 72 bp GCCCAGCGTGTCCTCCTCCAGGGATGGCAGAGTCTCTaGCAGCCTCGACAGGATGTTGATGTAGTGGAAGCG +
Preference number: 6 (lower is better)
Translates to: AQRVLLQGWQSL*QPRQDVDVVEA
Trigger: CGCTTCCACTACATCAACATCCTGTCGAGGCTGCCAGAGACTCTGCCATCCCTGGAGGAGGACACGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000541249.5
ENST00000542966.1
ENST00000543768.1
CDS CAA 90 bp GGAAGTGAGAGTAATTCCTGGTTGAAGCGGCAGGCGAAGATGAAGTaGCCCAGCGTGTCCTCCTCCAGGGATGGCAGAGTCTCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: GSESNSWLKRQAKMK*PSVSSSRDGRVSGS
Trigger: GCTGCCAGAGACTCTGCCATCCCTGGAGGAGGACACGCTGGGCAACTTCATCTTCGCCTGCCGCTTCAACCAGGAATTACTCTCACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540037.5
ENST00000542966.1
CDS TCA 72 bp GGGATGGCAGAGTCTCTGGCAGCCTCGACAGGATGTTaGTGTAGTGGAAGCGGTACCACTCCCTCACCGCAT +
Preference number: 6 (lower is better)
Translates to: GMAESLAASTGC*CSGSGTTPSPH
Trigger: ATGCGGTGAGGGAGTGGTACCGCTTCCACTACATCAACATCCTGTCGAGGCTGCCAGAGACTCTGCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228916.7
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000542966.1
ENST00000543768.1
CDS GCA 72 bp CCAGTACATCATGCCAAAGGTGCAGAGCCACAGCACTaGCCAGAAGGCCGTCTTCATGCGGTTGTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: PVHHAKGAEPQH*PEGRLHAVVLG
Trigger: TCCCAGCACAACCGCATGAAGACGGCCTTCTGGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGTACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000542260.1
ENST00000542436.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
CDS CAA 72 bp TTGAGGGTGCAGATGGTCACTGCGGGGAAGACGAGCTaGTCCGAGTTGAGGTTGATGTTGAGGCTGACGGGG +
Preference number: 6 (lower is better)
Translates to: LRVQMVTAGKTS*SELRLMLRLTG
Trigger: CCCCGTCAGCCTCAACATCAACCTCAACTCGGACAAGCTCGTCTTCCCCGCAGTGACCATCTGCACCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
CDS CAA 72 bp CGGGAGCCGGCCACGAGAGTGGTGAAGGAGCTGTATTaGTACAGGTCAAAGAGCGTCTGCTCTGTGATGCGG +
Preference number: 6 (lower is better)
Translates to: REPATRVVKELY*YRSKSVCSVMR
Trigger: CCGCATCACAGAGCAGACGCTCTTTGACCTGTACAAATACAGCTCCTTCACCACTCTCGTGGCCGGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
ENST00000544882.1
CDS CAA 90 bp GAGGCTGACGGGGTAGCTGAAGTACTCTCCGAAAAGCAGGCCGAATaGCCAGTACATCATGCCAAAGGTGCAGAGCCACAGCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: EADGVAEVLSEKQAE*PVHHAKGAEPQHCP
Trigger: TGGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGTACTGGCAATTCGGCCTGCTTTTCGGAGAGTACTTCAGCTACCCCGTCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
CDS GCA 72 bp CGGGTACCTGTAGGGATTGAGGGTGCAGATGGTCACTaGGGGGAAGACGAGCTTGTCCGAGTTGAGGTTGAT +
Preference number: 6 (lower is better)
Translates to: RVPVGIEGADGH*GEDELVRVEVD
Trigger: ATCAACCTCAACTCGGACAAGCTCGTCTTCCCCGCAGTGACCATCTGCACCCTCAATCCCTACAGGTACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000543768.1
ENST00000544882.1
CDS TCA 72 bp TGGAAGACCCATTCCTGCATGGCTTCCGGCACTTGGTaGAACAGCCCAGGTGGTCTGAGGAGAAGTCAACCT +
Preference number: 6 (lower is better)
Translates to: WKTHSCMASGTW*NSPGGLRRSQP
Trigger: AGGTTGACTTCTCCTCAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATGCAGGAATGGGTCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396966.6
CDS TCA 72 bp GGCTCCTCTCACCAGGCCATCTGGGTTCACCGGCATTaGCTTCCGTGCTGCCTTGTAACTTCTCTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: GSSHQAIWVHRH*LPCCLVTSLLL
Trigger: CAACAAGAGAGAAGTTACAAGGCAGCACGGAAGTCAATGCCGGTGAACCCAGATGGCCTGGTGAGAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536087.1
CDS GCA 72 bp AAAGCAGGCCGAATTGCCAGTACATCATGCCAAAGGTaGAGAGCCACAGCACTGCCCAGAAGGCCGTCTTCA +
Preference number: 6 (lower is better)
Translates to: KAGRIASTSCQR*RATALPRRPSS
Trigger: TGAAGACGGCCTTCTGGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGTACTGGCAATTCGGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000542260.1
ENST00000542436.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
CDS GCA 72 bp ACTCTCCGAAAAGCAGGCCGAATTGCCAGTACATCATaGCAAAGGTGCAGAGCCACAGCACTGCCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: TLRKAGRIASTS*QRCRATALPRR
Trigger: CCTTCTGGGCAGTGCTGTGGCTCTGCACCTTTGGCATGATGTACTGGCAATTCGGCCTGCTTTTCGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000542260.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
CDS GCA 72 bp CCACCATCATCCATAAAGGCAGGTTCATCCTGCCCGTaGACCATTACCCGGGCCCCAGTCACGTTGTTGATT +
Preference number: 6 (lower is better)
Translates to: PPSSIKAGSSCP*TITRAPVTLLI
Trigger: AATCAACAACGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541249.5
CDS GCA 72 bp TTAAAGCCACCATCATCCATAAAGGCAGGTTCATCCTaGCCGTGCACCATTACCCGGGCCCCAGTCACGTTG +
Preference number: 6 (lower is better)
Translates to: LKPPSSIKAGSS*PCTITRAPVTL
Trigger: CAACGTGACTGGGGCCCGGGTAATGGTGCACGGGCAGGATGAACCTGCCTTTATGGATGATGGTGGCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541249.5
CDS CAA 72 bp CATCTGGAAGACCCATTCCTGCATGGCTTCCGGCACTaGGTGAAACAGCCCAGGTGGTCTGAGGAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: HLEDPFLHGFRH*VKQPRWSEEKS
Trigger: TGACTTCTCCTCAGACCACCTGGGCTGTTTCACCAAGTGCCGGAAGCCATGCAGGAATGGGTCTTCCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396966.6
CDS CAA 72 bp CCCCTGGTCTGTGGCTTCCTCTCTTGCGGCAGTCTCTaGCGACTTCTTAAAGTGAAAGCCGGTGTCAACCAG +
Preference number: 6 (lower is better)
Translates to: PLVCGFLSCGSL*RLLKVKAGVNQ
Trigger: CTGGTTGACACCGGCTTTCACTTTAAGAAGTCGCAAGAGACTGCCGCAAGAGAGGAAGCCACAGACCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538957.1
CDS GCA 72 bp GTGAAGGAGCTGTATTTGTACAGGTCAAAGAGCGTCTaGTCTGTGATGCGGTCCAGCTCCTCCAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: VKELYLYRSKSV*SVMRSSSSSSS
Trigger: AGAGGAGCTGGAGGAGCTGGACCGCATCACAGAGCAGACGCTCTTTGACCTGTACAAATACAGCTCCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000540037.5
ENST00000543768.1
ENST00000544882.1
CDS CAA 72 bp GGGGTAGCTGAAGTACTCTCCGAAAAGCAGGCCGAATaGCCAGTACATCATGCCAAAGGTGCAGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: GVAEVLSEKQAE*PVHHAKGAEPQ
Trigger: CTGTGGCTCTGCACCTTTGGCATGATGTACTGGCAATTCGGCCTGCTTTTCGGAGAGTACTTCAGCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000228916.7
ENST00000338748.9
ENST00000360168.7
ENST00000396966.6
ENST00000536176.1
ENST00000536788.1
ENST00000543585.1
ENST00000543768.1
ENST00000544882.1
CDS CAA 72 bp AGGCTCCTCTCACCAGGCCATCTGGGTTCACCGGCATaGACTTCCGTGCTGCCTTGTAACTTCTCTCTTGTT +
Preference number: 6 (lower is better)
Translates to: RLLSPGHLGSPA*TSVLPCNFSLV
Trigger: AACAAGAGAGAAGTTACAAGGCAGCACGGAAGTCAATGCCGGTGAACCCAGATGGCCTGGTGAGAGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536087.1
CDS CAA 90 bp CAGCTTGTTCCCCTGGTCTGTGGCTTCCTCTCTTGCGGCAGTCTCTaGCGACTTCTTAAAGTGAAAGCCGGTGTCAACCAGGATTCCAAA +
Preference number: 6 (lower is better)
Translates to: QLVPLVCGFLSCGSL*RLLKVKAGVNQDSK
Trigger: TTTGGAATCCTGGTTGACACCGGCTTTCACTTTAAGAAGTCGCAAGAGACTGCCGCAAGAGAGGAAGCCACAGACCAGGGGAACAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538957.1
CDS CAA 90 bp AAGCCGGTGTCAACCAGGATTCCAAACCAGGTTCCCTTGCTTACCTaGATACTGCTCATGATACCTCCCCTTGGAAGGGACAGCTGGATT +
Preference number: 6 (lower is better)
Translates to: KPVSTRIPNQVPLLT*ILLMIPPLGRDSWI
Trigger: AATCCAGCTGTCCCTTCCAAGGGGAGGTATCATGAGCAGTATCAAGGTAAGCAAGGGAACCTGGTTTGGAATCCTGGTTGACACCGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538957.1
CDS TCA 72 bp ACTCACACTCCCTCAGTCACTCCAACCAACAGCCTGTaGGAGTCTCATCCTCATATCACAGAGGAGGAAGCT +
Preference number: 6 (lower is better)
Translates to: THTPSVTPTNSL*ESHPHITEEEA
Trigger: AGCTTCCTCCTCTGTGATATGAGGATGAGACTCTCACAGGCTGTTGGTTGGAGTGACTGAGGGAGTGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536087.1
CDS GCA 72 bp TTGTTCCCATTGGGCATGGTCCTCCCTGCAATAAGGTaGTCAGCACCCTGGCTGTTTGATCTCAAAGGTTCT +
Preference number: 6 (lower is better)
Translates to: LFPLGMVLPAIR*SAPWLFDLKGS
Trigger: AGAACCTTTGAGATCAAACAGCCAGGGTGCTGAGCACCTTATTGCAGGGAGGACCATGCCCAATGGGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536788.1
CDS CAA 72 bp GTGAGAGTAATTCCAGGCCATCTGGGTTCACCGGCATaGACTTCCGTGCTGCCTTGTAACTTCTCTCTTGTT +
Preference number: 6 (lower is better)
Translates to: VRVIPGHLGSPA*TSVLPCNFSLV
Trigger: AACAAGAGAGAAGTTACAAGGCAGCACGGAAGTCAATGCCGGTGAACCCAGATGGCCTGGAATTACTCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538979.5
CDS CAA 72 bp TCAACCAGGATTCCAAACCAGGTTCCCTTGCTTACCTaGATACTGCTCATGATACCTCCCCTTGGAAGGGAC +
Preference number: 6 (lower is better)
Translates to: STRIPNQVPLLT*ILLMIPPLGRD
Trigger: GTCCCTTCCAAGGGGAGGTATCATGAGCAGTATCAAGGTAAGCAAGGGAACCTGGTTTGGAATCCTGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538957.1
CDS CAA 72 bp AAGCCGGTGTCAACCAGGATTCCAAACCAGGTTCCCTaGCTTACCTTGATACTGCTCATGATACCTCCCCTT +
Preference number: 6 (lower is better)
Translates to: KPVSTRIPNQVP*LTLILLMIPPL
Trigger: AAGGGGAGGTATCATGAGCAGTATCAAGGTAAGCAAGGGAACCTGGTTTGGAATCCTGGTTGACACCGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538957.1
CDS CAA 90 bp GTGGTGGAAGTGAGAGTAATTCCAGGCCATCTGGGTTCACCGGCATaGACTTCCGTGCTGCCTTGTAACTTCTCTCTTGTTGCATTACAA +
Preference number: 6 (lower is better)
Translates to: VVEVRVIPGHLGSPA*TSVLPCNFSLVALQ
Trigger: TTGTAATGCAACAAGAGAGAAGTTACAAGGCAGCACGGAAGTCAATGCCGGTGAACCCAGATGGCCTGGAATTACTCTCACTTCCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538979.5
CDS TCA 72 bp CTACAGGACTTGTGCCTTTCAGAGCCATTTGTTTCCTaGTCACCTACTATGTGCTGGCACAATGCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: LQDLCLSEPFVS*SPTMCWHNAES
Trigger: GCTCTCAGCATTGTGCCAGCACATAGTAGGTGATCAGGAAACAAATGGCTCTGAAAGGCACAAGTCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536087.1
CDS GCA 72 bp GGAAAGAATGGGGGTGTCATCAAGGTCACTCCCATATaGTTCAGGCTTACAGGGATAGGGTTGTGTCAAACA +
Preference number: 6 (lower is better)
Translates to: GKNGGVIKVTPI*FRLTGIGLCQT
Trigger: TGTTTGACACAACCCTATCCCTGTAAGCCTGAAGCATATGGGAGTGACCTTGATGACACCCCCATTCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539953.1
CDS CCA 72 bp ATACTGCTCATGATACCTCCCCTTGGAAGGGACAGCTaGATTTTTCTTCATTGTCCTAATGAAGAAACTGAC +
Preference number: 6 (lower is better)
Translates to: ILLMIPPLGRDS*IFLHCPNEETD
Trigger: GTCAGTTTCTTCATTAGGACAATGAAGAAAAATCCAGCTGTCCCTTCCAAGGGGAGGTATCATGAGCAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538957.1
ENST00000543768.1
ENST00000545605.1