RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCN9A (Homo sapiens)

Ensembl gene IDs: ENSG00000169432

Ensembl transcript IDs: ENST00000303354.11, ENST00000409435.6, ENST00000409672.5, ENST00000452182.2, ENST00000454569.6, ENST00000472119.2, ENST00000642356.2, ENST00000643319.1, ENST00000644316.1, ENST00000645283.1, ENST00000645815.1, ENST00000645907.1, ENST00000667201.2, ENST00000667991.1

Found 671 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTaGTTCTTCTCCTTCTCCAGGCAAAGGGTTATCAACTGTGCTGCA +
Preference number: 1 (lower is better)
Translates to: CETGLWLIGIHRFSL*FFSFSRQRVINCAA
Trigger: TGCAGCACAGTTGATAACCCTTTGCCTGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643319.1
ENST00000667201.2
3UTR GCA 90 bp CAGCCTCTGCTTCTTCTCCTTCTCCAGGCAAAGGGTTATCAACTGTaGTGCACTCTGAGGAGCTTGACCGGTTTAATCTCACTTTGCTGT +
Preference number: 1 (lower is better)
Translates to: QPLLLLLLQAKGYQL*CTLRSLTGLISLCC
Trigger: ACAGCAAAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTTTGCCTGGAGAAGGAGAAGAAGCAGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR GCA 90 bp CCTCTGCTTCTTCTCCTTCTCCAGGCAAAGGGTTATCAACTGTGCTaGACTCTGAGGAGCTTGACCGGTTTAATCTCACTTTGCTGTATT +
Preference number: 1 (lower is better)
Translates to: PLLLLLLQAKGYQLC*TLRSLTGLISLCCI
Trigger: AATACAGCAAAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTTTGCCTGGAGAAGGAGAAGAAGCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR CCA 90 bp ATTTGGATTCTGGTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTaGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTC +
Preference number: 1 (lower is better)
Translates to: IWILVQYPVICETGL*LIGIHRFSLCFFSF
Trigger: GAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGACAGGATACTGGACCAGAATCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR CCA 90 bp TTTCTTGAGAAAGAGAGATCAGTAGAGGCTTCCCAGAAAACCATTTaGATTCTGGTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: FLEKERSVEASQKTI*ILVQYPVICETGLW
Trigger: CCAGAGGCCTGTTTCACAGATGACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCTCTCTTTCTCAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR CCA 90 bp GGCAGTGTTATATTGAAGAAACACTGCCATCAGACTCCAGCAATGTaGTTCCAATGTCATCAACGCATCTATCAATGTCACCTTGGCCAA +
Preference number: 1 (lower is better)
Translates to: GSVILKKHCHQTPAM*FQCHQRIYQCHLGQ
Trigger: TTGGCCAAGGTGACATTGATAGATGCGTTGATGACATTGGAACCACATTGCTGGAGTCTGATGGCAGTGTTTCTTCAATATAACACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
3UTR GCA 90 bp CAAGTTATTATCTGCTCAAGTATGTACCGTGGTCAAACAACTAACTaGATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAAAGGA +
Preference number: 1 (lower is better)
Translates to: QVIICSSMYRGQTTN*ISGRISSTLLTAKG
Trigger: TCCTTTCGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCAGATAATAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR GCA 90 bp AATAATTCCTACAGAGTTCTCTTACGATTCTTAAAGAATCATCAGTaGAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAA +
Preference number: 1 (lower is better)
Translates to: NNSYRVLLRFLKNHQ*KNNHLLMLPTFLRK
Trigger: TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATTCTTTAAGAATCGTAAGAGAACTCTGTAGGAATTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
3UTR-3UTR CCA 90 bp ACCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCACATATGTCTCTGCCTaGTTAAAAGCACAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: TICETGLWLIGIHRFSLCTYVSA*LKAQSC
Trigger: GCAGCTCTGTGCTTTTAACCAGGCAGAGACATATGT...GCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643319.1
3UTR-3UTR GCA 90 bp TACACAACCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCGGTGACATATGTCTCTaGCTGGTTAAAAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: YTTICETGLWLIGIHRFSGDICL*LVKSTE
Trigger: CTCTGTGCTTTTAACCAGGCAGAGACATATGTCACC...GCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643319.1
3UTR-3UTR GCA 90 bp AGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATCCTGTCAAGGGTTATCAACTGTaGTGCACTCTGAGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: RSVEASQKTIWILVQYPVKGYQL*CTLRSL
Trigger: CAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTT...GACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR-3UTR GCA 90 bp ATTTTTCCTTTCCCTGACTCTATGTTAACTTGGCAGCATGAGAACCTCCATACAGGTTATCAACTGTGCTaGACTCTGAGGAGCTTGACC +
Preference number: 2 (lower is better)
Translates to: IFPFPDSMLTWQHENLHTGYQLC*TLRSLT
Trigger: GGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACC...TGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR-3UTR GCA 90 bp AAAATCATTCTTAGCTCCCAGGGCCACACAATAACAGGCATTGGACTGGCTTTGACCAGTCCTTTCATTTaGCTTGGTCCATTATTAACT +
Preference number: 2 (lower is better)
Translates to: KIILSSQGHTITGIGLALTSPFI*LGPLLT
Trigger: AGTTAATAATGGACCAAGGCAAATGAAAGGACTGGT...CAAAGCCAGTCCAATGCCTGTTATTGTGTGGCCCTGGGAGCTAAGAATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645283.1
3UTR-3UTR CCA 90 bp ACTTGGCAGCATGAGAACCTCCATACACAACCTGGCTTATTTCTTGAGAAAGAGAAACCATTTGGATTCTaGTCCAGTATCCTGTCATCT +
Preference number: 2 (lower is better)
Translates to: TWQHENLHTQPGLFLEKEKPFGF*SSILSS
Trigger: AGATGACAGGATACTGGACCAGAATCCAAATGGTTT...CTCTTTCTCAAGAAATAAGCCAGGTTGTGTATGGAGGTTCTCATGCTGCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR-3UTR GCA 90 bp AGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATCCTGTCGGTTTAATCTCACTTTaGTGTATTCACTATCCGAAT +
Preference number: 2 (lower is better)
Translates to: RSVEASQKTIWILVQYPVGLISL*CIHYPN
Trigger: ATTCGGATAGTGAATACAGCAAAGTGAGATTAAACC...GACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAAGTCTTATCCTTGTTaGCATGTGAGTCAAGATGAA +
Preference number: 2 (lower is better)
Translates to: CSSMYRGQTTNCISGRISKSYPC*HVSQDE
Trigger: TTCATCTTGACTCACATGCCAACAAGGATAAGACTT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAATCAGAGTTAGTGACTaGACTGCCTTCGAGAATATT +
Preference number: 2 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEIRVSD*TAFENI
Trigger: AATATTCTCGAAGGCAGTGCAGTCACTAACTCTGAT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATATCAAGCATTTCATTaGAAAGCCAAGGCAAATACT +
Preference number: 2 (lower is better)
Translates to: CSSMYRGQTTNCISGRISYQAFH*KAKANT
Trigger: AGTATTTGCCTTGGCTTTGCAATGAAATGCTTGATA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACTAATTACAATCCTGTaGAAAGATGACAAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDELITIL*KDDKAD
Trigger: ATCTGCCTTGTCATCTTTTCACAGGATTGTAATTAG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR-3UTR CAA 90 bp GGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCCTGCACTCTGAGGAGCTaGACCGGTTTAATCTCTGTG +
Preference number: 3 (lower is better)
Translates to: GLWLIGIHRFSLCFFSFSCTLRS*TGLISV
Trigger: CACAGAGATTAAACCGGTCAAGCTCCTCAGAGTGCA...GGAGAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643319.1
3UTR CCA 72 bp CTGGTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTaGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: LVQYPVICETGL*LIGIHRFSLCF
Trigger: GAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGACAGGATACTGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR-3UTR CAA 90 bp ACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTGCACTCTGAGGAGCTaGACCGGTTTAATCTCACTT +
Preference number: 3 (lower is better)
Translates to: TGLWLIGIHRFSLCFFSFCTLRS*TGLISL
Trigger: AAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCA...GAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR GCA 72 bp CTTCTCCTTCTCCAGGCAAAGGGTTATCAACTGTGCTaGACTCTGAGGAGCTTGACCGGTTTAATCTCTGTG +
Preference number: 3 (lower is better)
Translates to: LLLLQAKGYQLC*TLRSLTGLISV
Trigger: CACAGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTTTGCCTGGAGAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643319.1
3UTR CCA 72 bp GAACCTCCATACACAACCATCTGTGAAACAGGCCTCTaGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: EPPYTTICETGL*LIGIHRFSLCF
Trigger: GAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTATGGAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643319.1
3UTR GCA 72 bp CTTCTCCTTCTCCAGGCAAAGGGTTATCAACTGTGCTaGACTCTGAGGAGCTTGACCGGTTTAATCTCACTT +
Preference number: 3 (lower is better)
Translates to: LLLLQAKGYQLC*TLRSLTGLISL
Trigger: AAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTTTGCCTGGAGAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR-3UTR CAA 90 bp GTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGCGGTTTAATCTCACTTaGCTGTATTCACTATCCGAA +
Preference number: 3 (lower is better)
Translates to: VQYPVICETGLWLIGIHRRFNLT*LYSLSE
Trigger: TTCGGATAGTGAATACAGCAAAGTGAGATTAAACCG...CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGACAGGATACTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
3UTR CCA 72 bp ATATTGAAGAAACACTGCCATCAGACTCCAGCAATGTaGTTCCAATGTCATCAACGCATCTATCAATGTCAC +
Preference number: 3 (lower is better)
Translates to: ILKKHCHQTPAM*FQCHQRIYQCH
Trigger: GTGACATTGATAGATGCGTTGATGACATTGGAACCACATTGCTGGAGTCTGATGGCAGTGTTTCTTCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
3UTR-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCTATCAAGCATTTCATaGCAAAGCCAAGGCAAATAC +
Preference number: 3 (lower is better)
Translates to: GQTTNCISGRISSTLLTALSSIS*QSQGKY
Trigger: GTATTTGCCTTGGCTTTGCAATGAAATGCTTGATAG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATTCTGTATGCGTGTGTaGTTTATTTACATGGGAAAC +
Preference number: 3 (lower is better)
Translates to: CSSMYRGQTTNCISGRISFCMRV*FIYMGN
Trigger: GTTTCCCATGTAAATAAACAACACACGCATACAGAA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTTCTGTATGCGTGTGTaGTTTATTTACATGGGAAAC +
Preference number: 3 (lower is better)
Translates to: GQTTNCISGRISSTLLTAFCMRV*FIYMGN
Trigger: GTTTCCCATGTAAATAAACAACACACGCATACAGAA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAACTATTATCAGTATTTaGGGCAGCACAGTCAAATGT +
Preference number: 3 (lower is better)
Translates to: CSSMYRGQTTNCISGRISTIISI*GSTVKC
Trigger: ACATTTGACTGTGCTGCCCAAAATACTGATAATAGT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR GCA 72 bp ATCTGCTCAAGTATGTACCGTGGTCAAACAACTAACTaGATATCAGGAAGGATTTCATCAACTTTGCTTACA +
Preference number: 3 (lower is better)
Translates to: ICSSMYRGQTTN*ISGRISSTLLT
Trigger: TGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATTCTGTATGCGTGTGTaGTTTATTTACATGGGAAAC +
Preference number: 3 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEFCMRV*FIYMGN
Trigger: GTTTCCCATGTAAATAAACAACACACGCATACAGAA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAATAACCTCTGTACATaGATAAAAAGTCAAGCTCCC +
Preference number: 3 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDENNLCT*IKSQAP
Trigger: GGGAGCTTGACTTTTTATCAATGTACAGAGGTTATT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCCAGGGGAGCATGAGGGCTaGGCGTCCATCAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: ASGSSEFIGSASASSPSPGEHEG*ASINQG
Trigger: TCCCTGGTTGATGGACGCTCAGCCCTCATGCTCCCC...TGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp TGGATTCTGGTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTGGCTCATCGGAAGGAGCCACGAATGCTaGGTGGTGACTGATTGGGGG +
Preference number: 4 (lower is better)
Translates to: WILVQYPVICETGLWLIGRSHEC*VVTDWG
Trigger: CCCCCAATCAGTCACCACTCAGCATTCGTGGCTCCT...TCCGATGAGCCAGAGGCCTGTTTCACAGATGACAGGATACTGGACCAGAATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAGACTGCGCCCCTCCTaGCAGGGCGCGCCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTARLRPS*QGAPVE
Trigger: CTCCACGGGCGCGCCCTGGCAGGAGGGGCGCAGTCT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409672.5
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCGCCTGCAAGCAGACTaGGCCCCTCCTGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFRLQAD*APPARA
Trigger: CGCCCTGGCAGGAGGGGCGCAGTCTGCTTGCAGGCG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409672.5
CDS-3UTR CCA 90 bp GGTTATCAACTGTGCTGCACTCTGAGGAGCTTGACCGGTTTAATCTCACTTTGCCGCTCCTGGGGTCTGTaGGGCACAAACAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GYQLCCTLRSLTGLISLCRSWGL*GTNSEP
Trigger: GGGCTCACTGTTTGTGCCCCACAGACCCCAGGAGCG...GCAAAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp AAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTGTCCATTGGGGAGCATaGGGGCTGAGCGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: KQASGSSEFIGSASASSPVHWGA*GLSVHQ
Trigger: TTGATGGACGCTCAGCCCTCATGCTCCCCAATGGAC...AGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGCGCTGGCGACCGCCTaGAAGCAGACTGCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISALATA*KQTAPL
Trigger: GAGGGGCGCAGTCTGCTTGCAGGCGGTCGCCAGCGC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409672.5
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACCGCCGCTGGAGCGCTaGCGACCGCCTGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISPPLER*RPPASR
Trigger: TCTGCTTGCAGGCGGTCGCCAGCGCTCCAGCGGCGG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp TGGATTCTGGTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTGGTCGTGCCCTCTaGCAGAAGCTGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: WILVQYPVICETGLWLIGIGRAL*QKLSIG
Trigger: CCCAATGGACAGCTTCTGCCAGAGGGCACGACCAAT...TCCGATGAGCCAGAGGCCTGTTTCACAGATGACAGGATACTGGACCAGAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTCTCTGGGCTCCTGTTaGTCAGGGGACGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSLGSC*SGDACR
Trigger: GCGGCAGGCGTCCCCTGAGCAACAGGAGCCCAGAGA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTCTCTGGGCTCCTGTTaGTCAGGGGACGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESLGSC*SGDACR
Trigger: GCGGCAGGCGTCCCCTGAGCAACAGGAGCCCAGAGA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTTTCAGCCGCTGCCGCTaGAATTGCCTCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VKQASGSSEFIGSASASSFSRCR*NCLSFF
Trigger: GAAGAAGCTGAGGCAATTGCAGCGGCAGCGGCTGAA...AGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp ACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCTGCTGCTTCGCCTTaGAGAAAACAAGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: TGLWLIGIHRFSLCFFSFSAASP*RKQGAT
Trigger: CGTGGCTCCTTGTTTTCTGCAAGGCGAAGCAGCAGA...GAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp CCTTTCCCTGACTCTATGTTAACTTGGCAGCATGAGAACCTCCATACACAACCTCACCGGCAGCATTGGTaGGGACCTACTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PFPDSMLTWQHENLHTQPHRQHW*GPTGLA
Trigger: AGCCAAGCCAGTAGGTCCCCACCAATGCTGCCGGTG...AGGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACCGCCGCTGGAGCGCTaGCGACCGCCTGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKPPLER*RPPASR
Trigger: TCTGCTTGCAGGCGGTCGCCAGCGCTCCAGCGGCGG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCCGAGCTGGCGGAATTaGAAAGCCGACAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFPSWRN*KADSRR
Trigger: GCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp TCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTATGCTGAGTGGTGACTaGTTGGGGGTAGACAACCTC +
Preference number: 4 (lower is better)
Translates to: SVKQASGSSEFIGSASASMLSGD*LGVDNL
Trigger: GAGGTTGTCTACCCCCAATCAGTCACCACTCAGCAT...AGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGGGGAGCATGAGGGCTaGGCGTCCATCAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFGEHEG*ASINQG
Trigger: TCCCTGGTTGATGGACGCTCAGCCCTCATGCTCCCC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTGGCACTGTCACTGTaGGGCACCAGGTTTCCAATG +
Preference number: 4 (lower is better)
Translates to: VQYPVICETGLWLIGIHRLALSL*GTRFPM
Trigger: CATTGGAAACCTGGTGCCTCACAGTGACAGTGCCAA...CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGACAGGATACTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp TCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTGTATATTCAGCCGCTaGCGCTGCAATTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SVKQASGSSEFIGSASASCIFSR*RCNCLS
Trigger: GCTGAGGCAATTGCAGCGGCAGCGGCTGAATATACA...AGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp AAACCATTTGGATTCTGGTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTGGCTCATGTGCTCGCCTATaGCCTTCGACACCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KPFGFWSSILSSVKQASGSCARL*PSTPRW
Trigger: CCACCTTGGTGTCGAAGGGCATAGGCGAGCACATGA...GCCAGAGGCCTGTTTCACAGATGACAGGATACTGGACCAGAATCCAAATGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp ACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCATCGGATTCCCCAGGTaGAATTGGCACTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: TGLWLIGIHRFSLCFFSFIGFPR*NWHCHC
Trigger: ACAGTGACAGTGCCAATTGCACCTGGGGAATCCGAT...GAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643319.1
ENST00000667201.2
CDS-3UTR GCA 90 bp ACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCCATAGGTTCAGCCTCTaGTTCTTCTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGLWLIGIHRFSLCFFSFHRFSL*FFSFSR
Trigger: CCTGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATG...GAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643319.1
ENST00000667201.2
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCGCTCCTGGGGTCTGTaGGGCACAAACAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFRSWGL*GTNSEP
Trigger: GGGCTCACTGTTTGTGCCCCACAGACCCCAGGAGCG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCTGCTGCGTCGCTCCTaGGGTCTGTGGGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSELLRRS*GLWGTN
Trigger: GTTTGTGCCCCACAGACCCCAGGAGCGACGCAGCAG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCTGCTGCGTCGCTCCTaGGGTCTGTGGGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFLLRRS*GLWGTN
Trigger: GTTTGTGCCCCACAGACCCCAGGAGCGACGCAGCAG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp ATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCCCCAGGTGCAATTaGCACTGTCACTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ICETGLWLIGIHRFSLCFFPRCN*HCHCEA
Trigger: AGCCTCACAGTGACAGTGCCAATTGCACCTGGGGAA...GAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCCGAGCTGGCGGAATTaGAAAGCCGACAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAPSWRN*KADSRR
Trigger: GCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp AGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATCCTGTCGTGGGGCACAAACAGTaGGCCCCTTCTGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: RSVEASQKTIWILVQYPVVGHKQ*APSALI
Trigger: AATGAGAGCAGAAGGGGCTCACTGTTTGTGCCCCAC...GACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp CCTTTCCCTGACTCTATGTTAACTTGGCAGCATGAGAACCTCCATACACAACCTACCTACTGGCTTGGCTaGTGTTACTGCTGCGTCGCT +
Preference number: 4 (lower is better)
Translates to: PFPDSMLTWQHENLHTQPTYWLG*CYCCVA
Trigger: AGCGACGCAGCAGTAACATCAGCCAAGCCAGTAGGT...AGGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGGGGAGCATGAGGGCTaGGCGTCCATCAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISGEHEG*ASINQG
Trigger: TCCCTGGTTGATGGACGCTCAGCCCTCATGCTCCCC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp ACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCATTGCTCTCTGTCTaGGGTTGGGATCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: TGLWLIGIHRFSLCFFSFSLLSV*GWDHSA
Trigger: TGCTGAATGATCCCAACCTCAGACAGAGAGCAATGA...GAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp GCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCCAGTTAACTTGGCAGCATaGGAACCTCCATACACAACC +
Preference number: 4 (lower is better)
Translates to: ASGSSEFIGSASASSPSPVNLAA*EPPYTT
Trigger: GGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAAC...TGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCTCTGGGCTCCTGTTaGTCAGGGGACGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSLGSC*SGDACR
Trigger: GCGGCAGGCGTCCCCTGAGCAACAGGAGCCCAGAGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCCCACCCAGTGCACCTaGAGAATCTGGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEPTQCT*RIWLQE
Trigger: CTCCTGGAGCCAGATTCTGCAGGTGCACTGGGTGGG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTCAACCTCTTTTCATGTaGTCGCCTATGCCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: SVKQASGSSEFIGSASASQPLFM*SPMPFD
Trigger: GTCGAAGGGCATAGGCGAGCACATGAAAAGAGGTTG...AGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp CCTCCATACACAACCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGCATAGGTTCAGCCTCTaGTTCTTCTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPYTTICETGLWLIGIHRHRFSL*FFSFSR
Trigger: CCTGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATG...CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTATGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTGCACCTGCAGAATCTaGCTCCAGGAGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTACTCRI*LQERAR
Trigger: CCGCGCCCTCTCCTGGAGCCAGATTCTGCAGGTGCA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATGCACCTGCAGAATCTaGCTCCAGGAGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISCTCRI*LQERAR
Trigger: CCGCGCCCTCTCCTGGAGCCAGATTCTGCAGGTGCA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCGCTCCTGGGGTCTGTaGGGCACAAACAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTARSWGL*GTNSEP
Trigger: GGGCTCACTGTTTGTGCCCCACAGACCCCAGGAGCG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACTGCTGCGTCGCTCCTaGGGTCTGTGGGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISLLRRS*GLWGTN
Trigger: GTTTGTGCCCCACAGACCCCAGGAGCGACGCAGCAG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp TTAACTTGGCAGCATGAGAACCTCCATACACAACCTGGCTTATTTCTTGAGAAACTGCTGCGTCGCTCCTaGGGTCTGTGGGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: LTWQHENLHTQPGLFLEKLLRRS*GLWGTN
Trigger: GTTTGTGCCCCACAGACCCCAGGAGCGACGCAGCAG...TTTCTCAAGAAATAAGCCAGGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp GAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATCCTGTCATCTGTGAAGGGGACCTACTGGCTTaGCTGATGTTACTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: EASQKTIWILVQYPVICEGDLLA*LMLLLR
Trigger: ACGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCC...TTCACAGATGACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCACCGGCAGCATTGGTaGGGACCTACTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEHRQHW*GPTGLA
Trigger: AGCCAAGCCAGTAGGTCCCCACCAATGCTGCCGGTG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCACCGGCAGCATTGGTaGGGACCTACTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFHRQHW*GPTGLA
Trigger: AGCCAAGCCAGTAGGTCCCCACCAATGCTGCCGGTG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp AGGAGCTTGACCGGTTTAATCTCACTTTGCTGTATTCACTATCCGAATCACTGCGTTCACCGGCAGCATTaGTGGGGACCTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RSLTGLISLCCIHYPNHCVHRQH*WGPTGL
Trigger: CAAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAAC...GCAGTGATTCGGATAGTGAATACAGCAAAGTGAGATTAAACCGGTCAAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp GCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCCATGTGAAACAGGCCTCTaGCTCATCGGAATTCATAGG +
Preference number: 4 (lower is better)
Translates to: ASGSSEFIGSASASSPSPCETGL*LIGIHR
Trigger: CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACA...TGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643319.1
ENST00000667201.2
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCAGCCTCAGCCGAGCTaGCGGAATTGGAAAGCCGAC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFQPQPS*RNWKAD
Trigger: GTCGGCTTTCCAATTCCGCCAGCTCGGCTGAGGCTG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp AACACTGCCATCAGACTCCAGCAATGTGGTTCCAATGTCATCAACGCATCTATCGAATGTCCCCATAGATaGAGGGCAGCTGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: NTAIRLQQCGSNVINASIECPHR*RAAVCQ
Trigger: CTGGCAAACAGCTGCCCTTCATCTATGGGGACATTC...GATAGATGCGTTGATGACATTGGAACCACATTGCTGGAGTCTGATGGCAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAGGAGCCACGAATGCTaGGTGGTGACTGATTGGGGG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFRSHEC*VVTDWG
Trigger: CCCCCAATCAGTCACCACTCAGCATTCGTGGCTCCT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGTCCATTGGGGAGCATaGGGGCTGAGCGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFVHWGA*GLSVHQ
Trigger: TTGATGGACGCTCAGCCCTCATGCTCCCCAATGGAC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGTCCATTGGGGAGCATaGGGGCTGAGCGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEVHWGA*GLSVHQ
Trigger: TTGATGGACGCTCAGCCCTCATGCTCCCCAATGGAC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTATACACAACCATCTGTaGAACAGGCCTCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: VKQASGSSEFIGSASASSIHNHL*NRPLAH
Trigger: ATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTAT...AGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCTCTGGGCTCCTGTTaGTCAGGGGACGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESLGSC*SGDACR
Trigger: GCGGCAGGCGTCCCCTGAGCAACAGGAGCCCAGAGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCACAGTGAGCCCCTTCTaGTCTCATTGTCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: TGLWLIGIHRFSLCFFSFTVSPF*SHCLQK
Trigger: TTTTTGGAGACAATGAGAGCAGAAGGGGCTCACTGT...GAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp TACACAACCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCGGTTATCAACTGTGCTaGACTCTGAGGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: YTTICETGLWLIGIHRFSGYQLC*TLRSLT
Trigger: GGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACC...GCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR GCA 90 bp GTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGAAGGGTTATCAACTGTaGTGCACTCTGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VQYPVICETGLWLIGIHRKGYQL*CTLRSL
Trigger: CAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTT...CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGACAGGATACTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATGCACCTGCAGAATCTaGCTCCAGGAGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKCTCRI*LQERAR
Trigger: CCGCGCCCTCTCCTGGAGCCAGATTCTGCAGGTGCA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACGCTCCTGGGGTCTGTaGGGCACAAACAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKRSWGL*GTNSEP
Trigger: GGGCTCACTGTTTGTGCCCCACAGACCCCAGGAGCG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACACCGGCAGCATTGGTaGGGACCTACTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISHRQHW*GPTGLA
Trigger: AGCCAAGCCAGTAGGTCCCCACCAATGCTGCCGGTG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGTTCACCGGCAGCATTaGTGGGGACCTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEVHRQH*WGPTGL
Trigger: CAAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAAC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp GCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCCAGAATTCCTCAGTCATTaGGTGGTGTTCCATAGCCAT +
Preference number: 4 (lower is better)
Translates to: ASGSSEFIGSASASSPSPEFLSH*VVFHSH
Trigger: ATGGCTATGGAACACCACCCAATGACTGAGGAATTC...TGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp AAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTGTGAAACAGGCCTCTaGCTCATCGGAATTCATAGG +
Preference number: 4 (lower is better)
Translates to: KQASGSSEFIGSASASSPCETGL*LIGIHR
Trigger: CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACA...AGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643319.1
ENST00000667201.2
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCAGCCTCAGCCGAGCTaGCGGAATTGGAAAGCCGAC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAQPQPS*RNWKAD
Trigger: GTCGGCTTTCCAATTCCGCCAGCTCGGCTGAGGCTG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp TGGATTCTGGTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTGGCTCATCGGATCTTGTGTATTTGATTaGTCGTGCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: WILVQYPVICETGLWLIGSCVFD*SCPLAE
Trigger: TTCTGCCAGAGGGCACGACCAATCAAATACACAAGA...TCCGATGAGCCAGAGGCCTGTTTCACAGATGACAGGATACTGGACCAGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAAATGGACAAAGCTCTaGGGTCCTGGGGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEKWTKL*GPGGGN
Trigger: GTTGCCTCCCCCAGGACCTCAGAGCTTTGTCCATTT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTTTCAGAAGAACTCTCTaGGAGGCCCATAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: VKQASGSSEFIGSASASSFRRTL*EAHNSA
Trigger: AGCAGAATTATGGGCCTCTCAGAGAGTTCTTCTGAA...AGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp ACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCGGAAACTTTTTCTTCTaGTGCTGTCCTCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: TGLWLIGIHRFSLCFFSFGNFFF*CCPLIL
Trigger: CAGAATCAGAGGACAGCATCAGAAGAAAAAGTTTCC...GAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAGGAGCCACGAATGCTaGGTGGTGACTGATTGGGGG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTARSHEC*VVTDWG
Trigger: CCCCCAATCAGTCACCACTCAGCATTCGTGGCTCCT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGTGGGGCACAAACAGTaGGCCCCTTCTGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEVGHKQ*APSALI
Trigger: AATGAGAGCAGAAGGGGCTCACTGTTTGTGCCCCAC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGTGGGGCACAAACAGTaGGCCCCTTCTGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFVGHKQ*APSALI
Trigger: AATGAGAGCAGAAGGGGCTCACTGTTTGTGCCCCAC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGACCTACTGGCTTGGCTaGTGTTACTGCTGCGTCGCT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSETYWLG*CYCCVA
Trigger: AGCGACGCAGCAGTAACATCAGCCAAGCCAGTAGGT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGGGGAGCATGAGGGCTaGGCGTCCATCAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEGEHEG*ASINQG
Trigger: TCCCTGGTTGATGGACGCTCAGCCCTCATGCTCCCC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AAAATCATTCTTAGCTCCCAGGGCCACACAATAACAGGCATTGGACTGGCTTTGAGACTCGGAGCAGTCTaGATGATCGCAGAACTGACA +
Preference number: 4 (lower is better)
Translates to: KIILSSQGHTITGIGLALRLGAV*MIAELT
Trigger: TGTCAGTTCTGCGATCATTCAGACTGCTCCGAGTCT...CAAAGCCAGTCCAATGCCTGTTATTGTGTGGCCCTGGGAGCTAAGAATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645283.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTCATGTGCTCGCCTATaGCCTTCGACACCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSCARL*PSTPRW
Trigger: CCACCTTGGTGTCGAAGGGCATAGGCGAGCACATGA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp AGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATCCTGTCATCGGATTCCCCAGGTaGAATTGGCACTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: RSVEASQKTIWILVQYPVIGFPR*NWHCHC
Trigger: ACAGTGACAGTGCCAATTGCACCTGGGGAATCCGAT...GACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp GAGAAAGAGAGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGGGTTATCAACTGTGCTaGACTCTGAGGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: EKERSVEASQKTIWILVQGYQLC*TLRSLT
Trigger: GGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACC...CTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCTCTCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp AAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTGGTGACATATGTCTCTaGCTGGTTAAAAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: KQASGSSEFIGSASASSPGDICL*LVKSTE
Trigger: CTCTGTGCTTTTAACCAGGCAGAGACATATGTCACC...AGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR CCA 90 bp TGGATTCTGGTCCAGTATCCTGTCATCTGTGAAACAGGCCTCTGGCTCATCGGACCTTCGACACCAAGGTaGAAACTTTTTCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: WILVQYPVICETGLWLIGPSTPR*KLFLLM
Trigger: CATCAGAAGAAAAAGTTTCCACCTTGGTGTCGAAGG...TCCGATGAGCCAGAGGCCTGTTTCACAGATGACAGGATACTGGACCAGAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACGCTCCTGGGGTCTGTaGGGCACAAACAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDERSWGL*GTNSEP
Trigger: GGGCTCACTGTTTGTGCCCCACAGACCCCAGGAGCG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACTGCTGCGTCGCTCCTaGGGTCTGTGGGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDELLRRS*GLWGTN
Trigger: GTTTGTGCCCCACAGACCCCAGGAGCGACGCAGCAG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGGGGACCTACTGGCTTaGCTGATGTTACTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFGDLLA*LMLLLR
Trigger: ACGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGTTCACCGGCAGCATTaGTGGGGACCTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISVHRQH*WGPTGL
Trigger: CAAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAAC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGTTCACCGGCAGCATTaGTGGGGACCTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAVHRQH*WGPTGL
Trigger: CAAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAAC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGATTGGTCGTGCCCTCTaGCAGAAGCTGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEIGRAL*QKLSIG
Trigger: CCCAATGGACAGCTTCTGCCAGAGGGCACGACCAAT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAAATGGACAAAGCTCTaGGGTCCTGGGGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAKWTKL*GPGGGN
Trigger: GTTGCCTCCCCCAGGACCTCAGAGCTTTGTCCATTT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp ATATTGAAGAAACACTGCCATCAGACTCCAGCAATGTGGTTCCAATGTCATCAAAAATGGACAAAGCTCTaGGGTCCTGGGGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: ILKKHCHQTPAMWFQCHQKWTKL*GPGGGN
Trigger: GTTGCCTCCCCCAGGACCTCAGAGCTTTGTCCATTT...TTGATGACATTGGAACCACATTGCTGGAGTCTGATGGCAGTGTTTCTTCAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGAATGTCCCCATAGATaGAGGGCAGCTGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEECPHR*RAAVCQ
Trigger: CTGGCAAACAGCTGCCCTTCATCTATGGGGACATTC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGAATGTCCCCATAGATaGAGGGCAGCTGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFECPHR*RAAVCQ
Trigger: CTGGCAAACAGCTGCCCTTCATCTATGGGGACATTC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTATGCTGAGTGGTGACTaGTTGGGGGTAGACAACCTC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFMLSGD*LGVDNL
Trigger: GAGGTTGTCTACCCCCAATCAGTCACCACTCAGCAT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGATGCTGAGTGGTGACTaGTTGGGGGTAGACAACCTC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEMLSGD*LGVDNL
Trigger: GAGGTTGTCTACCCCCAATCAGTCACCACTCAGCAT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAGGAGCCACGAATGCTaGGTGGTGACTGATTGGGGG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKRSHEC*VVTDWG
Trigger: CCCCCAATCAGTCACCACTCAGCATTCGTGGCTCCT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGTGGGGCACAAACAGTaGGCCCCTTCTGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAVGHKQ*APSALI
Trigger: AATGAGAGCAGAAGGGGCTCACTGTTTGTGCCCCAC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGTGGGGCACAAACAGTaGGCCCCTTCTGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISVGHKQ*APSALI
Trigger: AATGAGAGCAGAAGGGGCTCACTGTTTGTGCCCCAC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTCCATTGGGGAGCATaGGGGCTGAGCGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVHWGA*GLSVHQ
Trigger: TTGATGGACGCTCAGCCCTCATGCTCCCCAATGGAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GAGAAAGAGAGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGCTTTTCTTGTGTATTTaGTTGGTCGTGCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EKERSVEASQKTIWILVQLFLCI*LVVPSG
Trigger: GCCAGAGGGCACGACCAATCAAATACACAAGAAAAG...CTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCTCTCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp CCAGCAATGTGGTTCCAATGTCATCAACGCATCTATCAATGTCACCTTGGCCAATGTCACCTTGGCCAATaGACTCCAAGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: PAMWFQCHQRIYQCHLGQCHLGQ*TPSPLL
Trigger: AAGAAGTGGACTTGGAGTTCATTGGCCAAGGTGACA...TTGGCCAAGGTGACATTGATAGATGCGTTGATGACATTGGAACCACATTGCTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGATCATCCCCACCCAGTaGACCTGCAGAATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAIIPTQ*TCRIWL
Trigger: GAGCCAGATTCTGCAGGTGCACTGGGTGGGGATGAT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAATCATCCCCACCCAGTaGACCTGCAGAATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISIIPTQ*TCRIWL
Trigger: GAGCCAGATTCTGCAGGTGCACTGGGTGGGGATGAT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATTCAGCCGCTGCCGCTaGAATTGCCTCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISFSRCR*NCLSFF
Trigger: GAAGAAGCTGAGGCAATTGCAGCGGCAGCGGCTGAA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTTCAGCCGCTGCCGCTaGAATTGCCTCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAFSRCR*NCLSFF
Trigger: GAAGAAGCTGAGGCAATTGCAGCGGCAGCGGCTGAA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTGTATATTCAGCCGCTaGCGCTGCAATTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFCIFSR*RCNCLS
Trigger: GCTGAGGCAATTGCAGCGGCAGCGGCTGAATATACA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTCATGTGCTCGCCTATaGCCTTCGACACCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTASCARL*PSTPRW
Trigger: CCACCTTGGTGTCGAAGGGCATAGGCGAGCACATGA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCATGTGCTCGCCTATaGCCTTCGACACCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISSCARL*PSTPRW
Trigger: CCACCTTGGTGTCGAAGGGCATAGGCGAGCACATGA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTCTGCTGCTTCGCCTTaGAGAAAACAAGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSAASP*RKQGAT
Trigger: CGTGGCTCCTTGTTTTCTGCAAGGCGAAGCAGCAGA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCCATCTCCAAAAATGCTGTaGTCATCATCGGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: ASGSSEFIGSASASSPSPSPKML*SSSANS
Trigger: TGAATTTGCCGATGATGAGCACAGCATTTTTGGAGA...TGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp TCAACTGTGCTGCACTCTGAGGAGCTTGACCGGTTTAATCTCTGTGTAAAAGTGAAGGGTTATCAACTGTaGTGCACTCTGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: STVLHSEELDRFNLCVKVKGYQL*CTLRSL
Trigger: CAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTT...CACTTTTACACAGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR GCA 90 bp AAAATCATTCTTAGCTCCCAGGGCCACACAATAACAGGCATTGGACTGGCTTTGCACATGGCTATAAGGTaGGGGACCAGTCCTTTCATT +
Preference number: 4 (lower is better)
Translates to: KIILSSQGHTITGIGLALHMAIR*GTSPFI
Trigger: AATGAAAGGACTGGTCCCGCACCTTATAGCCATGTG...CAAAGCCAGTCCAATGCCTGTTATTGTGTGGCCCTGGGAGCTAAGAATGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645283.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAAAGCTCTGAGGTCCTaGGGGAGGCAACATTGCCAT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEKALRS*GRQHCH
Trigger: ATGGCAATGTTGCCTCCCCCAGGACCTCAGAGCTTT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGGGGACCTACTGGCTTaGCTGATGTTACTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAGDLLA*LMLLLR
Trigger: ACGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACACCGGCAGCATTGGTaGGGACCTACTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEHRQHW*GPTGLA
Trigger: AGCCAAGCCAGTAGGTCCCCACCAATGCTGCCGGTG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTTCACCGGCAGCATTaGTGGGGACCTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVHRQH*WGPTGL
Trigger: CAAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTTCCCCAGGTGCAATTaGCACTGTCACTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFFPRCN*HCHCEA
Trigger: AGCCTCACAGTGACAGTGCCAATTGCACCTGGGGAA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTTCCCCAGGTGCAATTaGCACTGTCACTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEFPRCN*HCHCEA
Trigger: AGCCTCACAGTGACAGTGCCAATTGCACCTGGGGAA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGTGTTCAAACCTGTTTaGGGCATGGTGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEVFKPV*GMVAHA
Trigger: GGCATGAGCCACCATGCCCCAAACAGGTTTGAACAC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAATTGGTCGTGCCCTCTaGCAGAAGCTGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISIGRAL*QKLSIG
Trigger: CCCAATGGACAGCTTCTGCCAGAGGGCACGACCAAT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000645907.1
CDS-3UTR CCA 90 bp GTGCTGCACTCTGAGGAGCTTGACCGGTTTAATCTCTGTGTAAAAGTGGTGACAACATATGTCTCTGCCTaGTTAAAAGCACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VLHSEELDRFNLCVKVVTTYVSA*LKAQSC
Trigger: GCAGCTCTGTGCTTTTAACCAGGCAGAGACATATGT...TGTCACCACTTTTACACAGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR CCA 90 bp CCAGCAATGTGGTTCCAATGTCATCAACGCATCTATCAATGTCACCTTGGCCAACAGACTCCAGCAATGTaGTTCCAATGTCATCAACGC +
Preference number: 4 (lower is better)
Translates to: PAMWFQCHQRIYQCHLGQQTPAM*FQCHQR
Trigger: GCGTTGATGACATTGGAACCACATTGCTGGAGTCTG...TTGGCCAAGGTGACATTGATAGATGCGTTGATGACATTGGAACCACATTGCTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR CCA 90 bp AAAGAGAGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATTTCCCCAGGTGCAATTaGCACTGTCACTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: KERSVEASQKTIWILVQYFPRCN*HCHCEA
Trigger: TGCCTCACAGTGACAGTGCCAATTGCACCTGGGGAA...ATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp ATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTCCCAGAAAACCATTTaGATTCTGGTCCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: ICETGLWLIGIHRFSLCFSQKTI*ILVQYP
Trigger: AGGATACTGGACCAGAATCCAAATGGTTTTCTGGGA...GAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAAATGGACAAAGCTCTaGGGTCCTGGGGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKKWTKL*GPGGGN
Trigger: GTTGCCTCCCCCAGGACCTCAGAGCTTTGTCCATTT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGAATGTCCCCATAGATaGAGGGCAGCTGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISECPHR*RAAVCQ
Trigger: CTGGCAAACAGCTGCCCTTCATCTATGGGGACATTC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGAATGTCCCCATAGATaGAGGGCAGCTGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAECPHR*RAAVCQ
Trigger: CTGGCAAACAGCTGCCCTTCATCTATGGGGACATTC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTACCCCTCTGGACACTaGCCTGAATCTGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEYPSGH*PESVLK
Trigger: TTTCAGCACAGATTCAGGTCAGTGTCCAGAGGGGTA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGATGCTGAGTGGTGACTaGTTGGGGGTAGACAACCTC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAMLSGD*LGVDNL
Trigger: GAGGTTGTCTACCCCCAATCAGTCACCACTCAGCAT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGTCCATTGGGGAGCATaGGGGCTGAGCGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEVHWGA*GLSVHQ
Trigger: TTGATGGACGCTCAGCCCTCATGCTCCCCAATGGAC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAGACTCGGAGCAGTCTaGATGATCGCAGAACTGACA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSERLGAV*MIAELT
Trigger: TGTCAGTTCTGCGATCATTCAGACTGCTCCGAGTCT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp TCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTGGGATTGTGAATAAATaGTTGACCATCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVKQASGSSEFIGSASASGIVNK*LTITVF
Trigger: GAAGACAGTGATGGTCAATCATTTATTCACAATCCC...AGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAATGGGGCCAAGATCTaGGTAGCCAAGAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFNGAKI*VAKSVC
Trigger: GCAAACACTCTTGGCTACTCAGATCTTGGCCCCATT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GTGCTGCACTCTGAGGAGCTTGACCGGTTTAATCTCTGTGTAAAAGTGGTGACATTGACTGATCCAGTTTaGTATTACCCCACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VLHSEELDRFNLCVKVVTLTDPV*YYPTLL
Trigger: CAGCAAAGTGGGGTAATATCAAACTGGATCAGTCAA...TGTCACCACTTTTACACAGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR TCA 90 bp GTGCTGCACTCTGAGGAGCTTGACCGGTTTAATCTCTGTGTAAAAGTGGTGACAACAGAGCTGCATCCTTaGCTGATCCAGTTTGATATT +
Preference number: 4 (lower is better)
Translates to: VLHSEELDRFNLCVKVVTTELHP*LIQFDI
Trigger: AATATCAAACTGGATCAGTCAAGGATGCAGCTCTGT...TGTCACCACTTTTACACAGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR GCA 90 bp GTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCATAATCAGGGTTTCTaGCAATTTTCACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: VKQASGSSEFIGSASASSHNQGF*QFSHRC
Trigger: ACACCTGTGTGAAAATTGGCAGAAACCCTGATTATG...AGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAGATCATGTAGGTTTTaGCAGCAGCACGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSERSCRF*QQHAAS
Trigger: AGACGCTGCGTGCTGCTGGCAAAACCTACATGATCT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATTCAGCCGCTGCCGCTaGAATTGCCTCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKFSRCR*NCLSFF
Trigger: GAAGAAGCTGAGGCAATTGCAGCGGCAGCGGCTGAA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTGTATATTCAGCCGCTaGCGCTGCAATTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTACIFSR*RCNCLS
Trigger: GCTGAGGCAATTGCAGCGGCAGCGGCTGAATATACA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATGTATATTCAGCCGCTaGCGCTGCAATTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISCIFSR*RCNCLS
Trigger: GCTGAGGCAATTGCAGCGGCAGCGGCTGAATATACA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCATGTGCTCGCCTATaGCCTTCGACACCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSCARL*PSTPRW
Trigger: CCACCTTGGTGTCGAAGGGCATAGGCGAGCACATGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCAACCTCTTTTCATGTaGTCGCCTATGCCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFQPLFM*SPMPFD
Trigger: GTCGAAGGGCATAGGCGAGCACATGAAAAGAGGTTG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTCTGCTGCTTCGCCTTaGAGAAAACAAGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTASAASP*RKQGAT
Trigger: CGTGGCTCCTTGTTTTCTGCAAGGCGAAGCAGCAGA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTATCGGATTCCCCAGGTaGAATTGGCACTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFIGFPR*NWHCHC
Trigger: ACAGTGACAGTGCCAATTGCACCTGGGGAATCCGAT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCATAGGTTCAGCCTCTaGTTCTTCTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFHRFSL*FFSFSR
Trigger: CCTGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAAAGCTCTGAGGTCCTaGGGGAGGCAACATTGCCAT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISKALRS*GRQHCH
Trigger: ATGGCAATGTTGCCTCCCCCAGGACCTCAGAGCTTT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGGGGACCTACTGGCTTaGCTGATGTTACTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKGDLLA*LMLLLR
Trigger: ACGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp GAGAAAGAGAGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTCTGTACCACCAAGGTaGACATTTTTGTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: EKERSVEASQKTIWILVQSVPPR*TFLSGL
Trigger: GAGTCCAGACAAAAATGTCCACCTTGGTGGTACAGA...CTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCTCTCTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTTCCCCAGGTGCAATTaGCACTGTCACTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAFPRCN*HCHCEA
Trigger: AGCCTCACAGTGACAGTGCCAATTGCACCTGGGGAA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATTCCCCAGGTGCAATTaGCACTGTCACTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISFPRCN*HCHCEA
Trigger: AGCCTCACAGTGACAGTGCCAATTGCACCTGGGGAA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAATTGGTCGTGCCCTCTaGCAGAAGCTGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKIGRAL*QKLSIG
Trigger: CCCAATGGACAGCTTCTGCCAGAGGGCACGACCAAT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAAATGGACAAAGCTCTaGGGTCCTGGGGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEKWTKL*GPGGGN
Trigger: GTTGCCTCCCCCAGGACCTCAGAGCTTTGTCCATTT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGAATGTCCCCATAGATaGAGGGCAGCTGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKECPHR*RAAVCQ
Trigger: CTGGCAAACAGCTGCCCTTCATCTATGGGGACATTC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGACCTGAATCTGTGCTaGAACCACAAAGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEDLNLC*NHKGEH
Trigger: ATGCTCTCCTTTGTGGTTTCAGCACAGATTCAGGTC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGACCTGAATCTGTGCTaGAACCACAAAGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFDLNLC*NHKGEH
Trigger: ATGCTCTCCTTTGTGGTTTCAGCACAGATTCAGGTC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATACCCCTCTGGACACTaGCCTGAATCTGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISYPSGH*PESVLK
Trigger: TTTCAGCACAGATTCAGGTCAGTGTCCAGAGGGGTA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTACCCCTCTGGACACTaGCCTGAATCTGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAYPSGH*PESVLK
Trigger: TTTCAGCACAGATTCAGGTCAGTGTCCAGAGGGGTA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAATGCTGAGTGGTGACTaGTTGGGGGTAGACAACCTC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKMLSGD*LGVDNL
Trigger: GAGGTTGTCTACCCCCAATCAGTCACCACTCAGCAT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAACCTACTGGCTTGGCTaGTGTTACTGCTGCGTCGCT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDETYWLG*CYCCVA
Trigger: AGCGACGCAGCAGTAACATCAGCCAAGCCAGTAGGT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTTATCAACTGTGCTGCACTCTGAGGAGCTTGACCGGTTTAATCTCACTTTGCATTCAGCATATCCTCTaGAAGGAGATAGGAACTACA +
Preference number: 4 (lower is better)
Translates to: GYQLCCTLRSLTGLISLCIQHIL*KEIGTT
Trigger: TGTAGTTCCTATCTCCTTTCAGAGGATATGCTGAAT...GCAAAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTCATTGCTCTCTGTCTaGGGTTGGGATCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESLLSV*GWDHSA
Trigger: TGCTGAATGATCCCAACCTCAGACAGAGAGCAATGA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAGACTCGGAGCAGTCTaGATGATCGCAGAACTGACA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISRLGAV*MIAELT
Trigger: TGTCAGTTCTGCGATCATTCAGACTGCTCCGAGTCT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAGACTCGGAGCAGTCTaGATGATCGCAGAACTGACA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTARLGAV*MIAELT
Trigger: TGTCAGTTCTGCGATCATTCAGACTGCTCCGAGTCT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp ATTTTTCCTTTCCCTGACTCTATGTTAACTTGGCAGCATGAGAACCTCCATACAAGACTCGGAGCAGTCTaGATGATCGCAGAACTGACA +
Preference number: 4 (lower is better)
Translates to: IFPFPDSMLTWQHENLHTRLGAV*MIAELT
Trigger: TGTCAGTTCTGCGATCATTCAGACTGCTCCGAGTCT...TGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGATACACAACCATCTGTaGAACAGGCCTCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEIHNHL*NRPLAH
Trigger: ATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTAT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGTTAACTTGGCAGCATaGGAACCTCCATACACAACC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEVNLAA*EPPYTT
Trigger: GGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAAC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAATGGGGCCAAGATCTaGGTAGCCAAGAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTANGAKI*VAKSVC
Trigger: GCAAACACTCTTGGCTACTCAGATCTTGGCCCCATT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTACTTGCAGGAAACCGTaGCCCATCTGTGGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFTCRKP*PICGVN
Trigger: ATTAACACCACAGATGGGTCACGGTTTCCTGCAAGT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGAACGATTTGGAACTTaGCTTGCAGGAAACCGTGAC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFERFGT*LAGNRD
Trigger: GTCACGGTTTCCTGCAAGTCAAGTTCCAAATCGTTC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGACAGTAGGAACACTTaGAGCCAGGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFDSRNT*SQEFET
Trigger: AGTCTCAAACTCCTGGCTTCAAGTGTTCCTACTGTC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCTTTTCTTGTGTATTTaGTTGGTCGTGCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFLFLCI*LVVPSG
Trigger: GCCAGAGGGCACGACCAATCAAATACACAAGAAAAG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCTTTTCTTGTGTATTTaGTTGGTCGTGCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSELFLCI*LVVPSG
Trigger: GCCAGAGGGCACGACCAATCAAATACACAAGAAAAG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp ATTTTTCCTTTCCCTGACTCTATGTTAACTTGGCAGCATGAGAACCTCCATACAGTATCCTGTCATCTGTaGAACAGGCCTCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: IFPFPDSMLTWQHENLHTVSCHL*NRPLAH
Trigger: ATGAGCCAGAGGCCTGTTTCACAGATGACAGGATAC...TGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp ACTGCCATCAGACTCCAGCAATGTGGTTCCAATGTCATCAACGCATCTATCAATTGGGGGAGGCAACATTaGCATCTTTTCATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: TAIRLQQCGSNVINASINWGRQH*HLFILY
Trigger: ATACAGGATGAAAAGATGGCAATGTTGCCTCCCCCA...ATTGATAGATGCGTTGATGACATTGGAACCACATTGCTGGAGTCTGATGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAGATCATGTAGGTTTTaGCAGCAGCACGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTARSCRF*QQHAAS
Trigger: AGACGCTGCGTGCTGCTGGCAAAACCTACATGATCT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ATTTTTCCTTTCCCTGACTCTATGTTAACTTGGCAGCATGAGAACCTCCATACAAGATCATGTAGGTTTTaGCAGCAGCACGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: IFPFPDSMLTWQHENLHTRSCRF*QQHAAS
Trigger: AGACGCTGCGTGCTGCTGGCAAAACCTACATGATCT...TGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATTCAGCCGCTGCCGCTaGAATTGCCTCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEFSRCR*NCLSFF
Trigger: GAAGAAGCTGAGGCAATTGCAGCGGCAGCGGCTGAA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATGTATATTCAGCCGCTaGCGCTGCAATTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKCIFSR*RCNCLS
Trigger: GCTGAGGCAATTGCAGCGGCAGCGGCTGAATATACA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCATGTGCTCGCCTATaGCCTTCGACACCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESCARL*PSTPRW
Trigger: CCACCTTGGTGTCGAAGGGCATAGGCGAGCACATGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCAACCTCTTTTCATGTaGTCGCCTATGCCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAQPLFM*SPMPFD
Trigger: GTCGAAGGGCATAGGCGAGCACATGAAAAGAGGTTG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACAACCTCTTTTCATGTaGTCGCCTATGCCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISQPLFM*SPMPFD
Trigger: GTCGAAGGGCATAGGCGAGCACATGAAAAGAGGTTG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCTGCTGCTTCGCCTTaGAGAAAACAAGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSAASP*RKQGAT
Trigger: CGTGGCTCCTTGTTTTCTGCAAGGCGAAGCAGCAGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAATCGGATTCCCCAGGTaGAATTGGCACTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISIGFPR*NWHCHC
Trigger: ACAGTGACAGTGCCAATTGCACCTGGGGAATCCGAT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGGTTATCAACTGTGCTaGACTCTGAGGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAGYQLC*TLRSLT
Trigger: GGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGGTTATCAACTGTGCTaGACTCTGAGGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISGYQLC*TLRSLT
Trigger: GGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAAGGGTTATCAACTGTaGTGCACTCTGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEKGYQL*CTLRSL
Trigger: CAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGTCACTGCTTGGCTTTaGGGCTTCTTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFVTAWL*GFFIII
Trigger: GATGATGATGAAGAAGCCCCAAAGCCAAGCAGTGAC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGTTATATTGAAGAAACACTGCCATCAGACTCCAGCAATGTGGTTCCAATGGTCACTGCTTGGCTTTaGGGCTTCTTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: QCYIEETLPSDSSNVVPMVTAWL*GFFIII
Trigger: GATGATGATGAAGAAGCCCCAAAGCCAAGCAGTGAC...CATTGGAACCACATTGCTGGAGTCTGATGGCAGTGTTTCTTCAATATAACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR CCA 90 bp CCTTTCCCTGACTCTATGTTAACTTGGCAGCATGAGAACCTCCATACACAACCTCCTTTTCCTCTCCACTaGAGAGCTTCTTTTGATTCT +
Preference number: 4 (lower is better)
Translates to: PFPDSMLTWQHENLHTQPPFPLH*RASFDS
Trigger: AGAATCAAAAGAAGCTCTCCAGTGGAGAGGAAAAGG...AGGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCTAGTCACTGCAATCTaGAGGTTGTTTGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSELVTAI*RLFASG
Trigger: CCCTGATGCAAACAACCTCCAGATTGCAGTGACTAG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATTCCCCAGGTGCAATTaGCACTGTCACTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKFPRCN*HCHCEA
Trigger: AGCCTCACAGTGACAGTGCCAATTGCACCTGGGGAA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTGTGAAACAGGCCTCTaGCTCATCGGAATTCATAGG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFCETGL*LIGIHR
Trigger: CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGTAACCCCAGCATGTTaGCAGGTCATGACAGTAGGA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAVTPAC*QVMTVG
Trigger: TCCTACTGTCATGACCTGCCAACATGCTGGGGTTAC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTGTTCAAACCTGTTTaGGGCATGGTGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVFKPV*GMVAHA
Trigger: GGCATGAGCCACCATGCCCCAAACAGGTTTGAACAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp TGGCAGTGTTATATTGAAGAAACACTGCCATCAGACTCCAGCAATGTGGTTCCACAAGAGACTGTTTTGTaGAATGGACAAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: WQCYIEETLPSDSSNVVPQETVL*NGQSSE
Trigger: CTCAGAGCTTTGTCCATTTCACAAAACAGTCTCTTG...TGGAACCACATTGCTGGAGTCTGATGGCAGTGTTTCTTCAATATAACACTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAAGCAGGTGTGGCATTaGAACGGAAGATTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFKQVWH*NGRLFS
Trigger: GGAAAACAATCTTCCGTTTCAATGCCACACCTGCTT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGGTCACGAAGAAAAGTaGATTCTCCTACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFGHEEK*ILLHRS
Trigger: GCTTCTGTGTAGGAGAATTCACTTTTCTTCGTGACC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGGTCACGAAGAAAAGTaGATTCTCCTACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEGHEEK*ILLHRS
Trigger: GCTTCTGTGTAGGAGAATTCACTTTTCTTCGTGACC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGCTTCAGGTTTCCCATaGACAGCTGTAGTCCAATTA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEASGFP*TAVVQL
Trigger: TAATTGGACTACAGCTGTTCATGGGAAACCTGAAGC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGACCTGAATCTGTGCTaGAACCACAAAGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTADLNLC*NHKGEH
Trigger: ATGCTCTCCTTTGTGGTTTCAGCACAGATTCAGGTC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATACCCCTCTGGACACTaGCCTGAATCTGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKYPSGH*PESVLK
Trigger: TTTCAGCACAGATTCAGGTCAGTGTCCAGAGGGGTA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTTCAGAAGAACTCTCTaGGAGGCCCATAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFFRRTL*EAHNSA
Trigger: AGCAGAATTATGGGCCTCTCAGAGAGTTCTTCTGAA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCTTTTCTTGTGTATTTaGTTGGTCGTGCCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSELFLCI*LVVPLS
Trigger: TGACAGCGGCACGACCAATCAAATACACAAGAAAAG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303354.11
ENST00000642356.2
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCTTTTCTTGTGTATTTaGTTGGTCGTGCCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFLFLCI*LVVPLS
Trigger: TGACAGCGGCACGACCAATCAAATACACAAGAAAAG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303354.11
ENST00000642356.2
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTCATTGCTCTCTGTCTaGGGTTGGGATCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTASLLSV*GWDHSA
Trigger: TGCTGAATGATCCCAACCTCAGACAGAGAGCAATGA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAGACTCGGAGCAGTCTaGATGATCGCAGAACTGACA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKRLGAV*MIAELT
Trigger: TGTCAGTTCTGCGATCATTCAGACTGCTCCGAGTCT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGATACACAACCATCTGTaGAACAGGCCTCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAIHNHL*NRPLAH
Trigger: ATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTAT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGTTAACTTGGCAGCATaGGAACCTCCATACACAACC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISVNLAA*EPPYTT
Trigger: GGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAAC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGTTAACTTGGCAGCATaGGAACCTCCATACACAACC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAVNLAA*EPPYTT
Trigger: GGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAAC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGACTTGCAGGAAACCGTaGCCCATCTGTGGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTATCRKP*PICGVN
Trigger: ATTAACACCACAGATGGGTCACGGTTTCCTGCAAGT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGAACGATTTGGAACTTaGCTTGCAGGAAACCGTGAC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISERFGT*LAGNRD
Trigger: GTCACGGTTTCCTGCAAGTCAAGTTCCAAATCGTTC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGTGCCTTCTGAAGGGTaGAACCATCAGTACAAACAG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISVPSEG*NHQYKQ
Trigger: CTGTTTGTACTGATGGTTTCACCCTTCAGAAGGCAC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGTGCCTTCTGAAGGGTaGAACCATCAGTACAAACAG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAVPSEG*NHQYKQ
Trigger: CTGTTTGTACTGATGGTTTCACCCTTCAGAAGGCAC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTATGACAGTGCCTTCTaGAGGGTGAAACCATCAGTA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFYDSAF*RVKPSV
Trigger: TACTGATGGTTTCACCCTTCAGAAGGCACTGTCATA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTATGACAGTGCCTTCTaGAGGGTGAAACCATCAGTA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEYDSAF*RVKPSV
Trigger: TACTGATGGTTTCACCCTTCAGAAGGCACTGTCATA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp GAGAAAGAGAGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGACCTGGCTTATTTCTTaGGAAAGAGAGATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: EKERSVEASQKTIWILVQTWLIS*EREISR
Trigger: TCTACTGATCTCTCTTTCTCAAGAAATAAGCCAGGT...CTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCTCTCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTGGGGGAGGCAACATTaGCATCTTTTCATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFWGRQH*HLFILY
Trigger: ATACAGGATGAAAAGATGGCAATGTTGCCTCCCCCA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTGGGGGAGGCAACATTaGCATCTTTTCATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEWGRQH*HLFILY
Trigger: ATACAGGATGAAAAGATGGCAATGTTGCCTCCCCCA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAGATCATGTAGGTTTTaGCAGCAGCACGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKRSCRF*QQHAAS
Trigger: AGACGCTGCGTGCTGCTGGCAAAACCTACATGATCT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCTGCTGCTTCGCCTTaGAGAAAACAAGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESAASP*RKQGAT
Trigger: CGTGGCTCCTTGTTTTCTGCAAGGCGAAGCAGCAGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACTTGGCAGCATGAGAACCTCCATACACAACCTGGCTTATTTCTTGAGAAAGAGCATTGTCTCCAAAAATaGTGTGCTCATCATCGGCAA +
Preference number: 4 (lower is better)
Translates to: TWQHENLHTQPGLFLEKEHCLQK*CAHHRQ
Trigger: TTGCCGATGATGAGCACAGCATTTTTGGAGACAATG...CTCTTTCTCAAGAAATAAGCCAGGTTGTGTATGGAGGTTCTCATGCTGCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTACAGTGAGCCCCTTCTaGTCTCATTGTCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFTVSPF*SHCLQK
Trigger: TTTTTGGAGACAATGAGAGCAGAAGGGGCTCACTGT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGACAGTGAGCCCCTTCTaGTCTCATTGTCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSETVSPF*SHCLQK
Trigger: TTTTTGGAGACAATGAGAGCAGAAGGGGCTCACTGT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp TACACAACCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCGGAAATTGTGACCTTTaGTCATTTCAGCAAGTGTAT +
Preference number: 4 (lower is better)
Translates to: YTTICETGLWLIGIHRFSGNCDL*SFQQVY
Trigger: ATACACTTGCTGAAATGAGCAAAGGTCACAATTTCC...GCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGGTTATCAACTGTGCTaGACTCTGAGGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKGYQLC*TLRSLT
Trigger: GGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAAGGGTTATCAACTGTaGTGCACTCTGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAKGYQL*CTLRSL
Trigger: CAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACATAGGTTCAGCCTCTaGTTCTTCTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKHRFSL*FFSFSR
Trigger: CCTGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp TACACAACCATCTGTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCGATATTACCCCACTTTaGTGTATTCACTATCCGAAT +
Preference number: 4 (lower is better)
Translates to: YTTICETGLWLIGIHRFSDITPL*CIHYPN
Trigger: ATTCGGATAGTGAATACAGCAAAGTGGGGTAATATC...GCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR GCA 90 bp CTTACACATGGCTATAAGGTGCGGGACCAGTCCTTTCATTTGCCTTGGTCCATTACCAGTCCTTTCATTTaGCTTGGTCCATTATTAACT +
Preference number: 4 (lower is better)
Translates to: LTHGYKVRDQSFHLPWSITSPFI*LGPLLT
Trigger: AGTTAATAATGGACCAAGGCAAATGAAAGGACTGGT...AATGGACCAAGGCAAATGAAAGGACTGGTCCCGCACCTTATAGCCATGTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645283.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGTCACTGCTTGGCTTTaGGGCTTCTTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISVTAWL*GFFIII
Trigger: GATGATGATGAAGAAGCCCCAAAGCCAAGCAGTGAC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTGTACTCGACATTTTTaGTCCAGTCCGGTGGGTTAT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSECTRHF*SSPVGY
Trigger: ATAACCCACCGGACTGGACCAAAAATGTCGAGTACA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTGTACTCGACATTTTTaGTCCAGTCCGGTGGGTTAT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFCTRHF*SSPVGY
Trigger: ATAACCCACCGGACTGGACCAAAAATGTCGAGTACA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTCTTGTGTATTTGATTaGTCGTGCCGCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSCVFD*SCRCHQ
Trigger: CTGATGACAGCGGCACGACCAATCAAATACACAAGA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303354.11
ENST00000642356.2
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTCTGTACCACCAAGGTaGACATTTTTGTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESVPPR*TFLSGL
Trigger: GAGTCCAGACAAAAATGTCCACCTTGGTGGTACAGA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGAATTCCTCAGTCATTaGGTGGTGTTCCATAGCCAT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFEFLSH*VVFHSH
Trigger: ATGGCTATGGAACACCACCCAATGACTGAGGAATTC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGAATTCCTCAGTCATTaGGTGGTGTTCCATAGCCAT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEEFLSH*VVFHSH
Trigger: ATGGCTATGGAACACCACCCAATGACTGAGGAATTC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACTAGTCACTGCAATCTaGAGGTTGTTTGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISLVTAI*RLFASG
Trigger: CCCTGATGCAAACAACCTCCAGATTGCAGTGACTAG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTGTGAAACAGGCCTCTaGCTCATCGGAATTCATAGG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTACETGL*LIGIHR
Trigger: CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTAACCCCAGCATGTTaGCAGGTCATGACAGTAGGA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVTPAC*QVMTVG
Trigger: TCCTACTGTCATGACCTGCCAACATGCTGGGGTTAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGTGTTCAAACCTGTTTaGGGCATGGTGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEVFKPV*GMVAHA
Trigger: GGCATGAGCCACCATGCCCCAAACAGGTTTGAACAC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp GAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATCCTGTCATCTGTGAAAAACCATTTGGATTCTaGTCCAGTATCCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: EASQKTIWILVQYPVICEKPFGF*SSILSS
Trigger: AGATGACAGGATACTGGACCAGAATCCAAATGGTTT...TTCACAGATGACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCAAGAGACTGTTTTGTaGAATGGACAAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEQETVL*NGQSSE
Trigger: CTCAGAGCTTTGTCCATTTCACAAAACAGTCTCTTG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAAGCAGGTGTGGCATTaGAACGGAAGATTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISKQVWH*NGRLFS
Trigger: GGAAAACAATCTTCCGTTTCAATGCCACACCTGCTT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGGTCACGAAGAAAAGTaGATTCTCCTACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISGHEEK*ILLHRS
Trigger: GCTTCTGTGTAGGAGAATTCACTTTTCTTCGTGACC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGGTCACGAAGAAAAGTaGATTCTCCTACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAGHEEK*ILLHRS
Trigger: GCTTCTGTGTAGGAGAATTCACTTTTCTTCGTGACC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGCTTCAGGTTTCCCATaGACAGCTGTAGTCCAATTA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAASGFP*TAVVQL
Trigger: TAATTGGACTACAGCTGTTCATGGGAAACCTGAAGC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGGAAACTTTTTCTTCTaGTGCTGTCCTCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFGNFFF*CCPLIL
Trigger: CAGAATCAGAGGACAGCATCAGAAGAAAAAGTTTCC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCATTGCTCTCTGTCTaGGGTTGGGATCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSLLSV*GWDHSA
Trigger: TGCTGAATGATCCCAACCTCAGACAGAGAGCAATGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAATACACAACCATCTGTaGAACAGGCCTCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKIHNHL*NRPLAH
Trigger: ATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTAT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAAGGATTTGCAGACATaGACCTTTCTTCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFKDLQT*TFLPSV
Trigger: CACAGATGGAAGAAAGGTTCATGTCTGCAAATCCTT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGTTTTAGTGTGGTTGTaGTGGGTTCATAGGACACTT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEVLVWL*WVHRTL
Trigger: AAGTGTCCTATGAACCCATCACAACCACACTAAAAC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTGCCTTCTGAAGGGTaGAACCATCAGTACAAACAG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVPSEG*NHQYKQ
Trigger: CTGTTTGTACTGATGGTTTCACCCTTCAGAAGGCAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTATGACAGTGCCTTCTaGAGGGTGAAACCATCAGTA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAYDSAF*RVKPSV
Trigger: TACTGATGGTTTCACCCTTCAGAAGGCACTGTCATA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACTTTTCTTGTGTATTTaGTTGGTCGTGCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKLFLCI*LVVPSG
Trigger: GCCAGAGGGCACGACCAATCAAATACACAAGAAAAG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATGGGGGAGGCAACATTaGCATCTTTTCATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISWGRQH*HLFILY
Trigger: ATACAGGATGAAAAGATGGCAATGTTGCCTCCCCCA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGAAAGTCTTTTTGTCTaGATAGTAGGGGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFESLFV*IVGVQV
Trigger: GACTTGGACCCCTACTATGCAGACAAAAAGACTTTC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAGATCATGTAGGTTTTaGCAGCAGCACGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDERSCRF*QQHAAS
Trigger: AGACGCTGCGTGCTGCTGGCAAAACCTACATGATCT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACAACCTCTTTTCATGTaGTCGCCTATGCCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEQPLFM*SPMPFD
Trigger: GTCGAAGGGCATAGGCGAGCACATGAAAAGAGGTTG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCATTGTCTCCAAAAATaGTGTGCTCATCATCGGCAA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFHCLQK*CAHHRQ
Trigger: TTGCCGATGATGAGCACAGCATTTTTGGAGACAATG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGACAGTGAGCCCCTTCTaGTCTCATTGTCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTATVSPF*SHCLQK
Trigger: TTTTTGGAGACAATGAGAGCAGAAGGGGCTCACTGT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACTTGGCAGCATGAGAACCTCCATACACAACCTGGCTTATTTCTTGAGAAAGAGGATCAAGAATTTGTGTaGAAATCTGTACCACCAAGG +
Preference number: 4 (lower is better)
Translates to: TWQHENLHTQPGLFLEKEDQEFV*KSVPPR
Trigger: CCTTGGTGGTACAGATTTGCACACAAATTCTTGATC...CTCTTTCTCAAGAAATAAGCCAGGTTGTGTATGGAGGTTCTCATGCTGCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp CTGCACTCTGAGGAGCTTGACCGGTTTAATCTCTGTGTAAAAGTGGTGACATATAGTATTCAGATCTTCTaGTTGTCTTATCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LHSEELDRFNLCVKVVTYSIQIF*LSYLPG
Trigger: TCCAGGGAGATAAGACAAGCAGAAGATCTGAATACT...ATATGTCACCACTTTTACACAGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAATCGGATTCCCCAGGTaGAATTGGCACTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEIGFPR*NWHCHC
Trigger: ACAGTGACAGTGCCAATTGCACCTGGGGAATCCGAT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAAGGGTTATCAACTGTaGTGCACTCTGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKKGYQL*CTLRSL
Trigger: CAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACATAGGTTCAGCCTCTaGTTCTTCTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEHRFSL*FFSFSR
Trigger: CCTGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAATTGCTCCTATGAGTaGATTCACAACGACCCTCAT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSENCSYE*IHNDPH
Trigger: ATGAGGGTCGTTGTGAATGCACTCATAGGAGCAATT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCATGATGGAAGGAATTaGTCCTATGAGTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEHDGRN*SYECIH
Trigger: GTGAATGCACTCATAGGAGCAATTCCTTCCATCATG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGCCCAAGTTATTATCTaGTCAAGTATGTACCGTGGT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEAQVII*SSMYRG
Trigger: ACCACGGTACATACTTGAGCAGATAATAACTTGGGC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACTGCCATCAGACTCCAGCAATGTGGTTCCAATGTCATCAACGCATCTATCAATATATTGAAGAAACACTaGCATCAGACTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: TAIRLQQCGSNVINASINILKKH*HQTPAM
Trigger: CATTGCTGGAGTCTGATGGCAGTGTTTCTTCAATAT...ATTGATAGATGCGTTGATGACATTGGAACCACATTGCTGGAGTCTGATGGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTCACTGCTTGGCTTTaGGGCTTCTTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVTAWL*GFFIII
Trigger: GATGATGATGAAGAAGCCCCAAAGCCAAGCAGTGAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTGTACTCGACATTTTTaGTCCAGTCCGGTGGGTTAT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTACTRHF*SSPVGY
Trigger: ATAACCCACCGGACTGGACCAAAAATGTCGAGTACA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCCTTTTCCTCTCCACTaGAGAGCTTCTTTTGATTCT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFPFPLH*RASFDS
Trigger: AGAATCAAAAGAAGCTCTCCAGTGGAGAGGAAAAGG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCCTTTTCCTCTCCACTaGAGAGCTTCTTTTGATTCT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEPFPLH*RASFDS
Trigger: AGAATCAAAAGAAGCTCTCCAGTGGAGAGGAAAAGG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCCTTCGACACCAAGGTaGAAACTTTTTCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFPSTPR*KLFLLM
Trigger: CATCAGAAGAAAAAGTTTCCACCTTGGTGTCGAAGG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCCTTCGACACCAAGGTaGAAACTTTTTCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEPSTPR*KLFLLM
Trigger: CATCAGAAGAAAAAGTTTCCACCTTGGTGTCGAAGG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCTTGTGTATTTGATTaGTCGTGCCGCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISSCVFD*SCRCHQ
Trigger: CTGATGACAGCGGCACGACCAATCAAATACACAAGA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303354.11
ENST00000642356.2
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCTGTACCACCAAGGTaGACATTTTTGTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISSVPPR*TFLSGL
Trigger: GAGTCCAGACAAAAATGTCCACCTTGGTGGTACAGA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTCTGTACCACCAAGGTaGACATTTTTGTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTASVPPR*TFLSGL
Trigger: GAGTCCAGACAAAAATGTCCACCTTGGTGGTACAGA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACTAGTCACTGCAATCTaGAGGTTGTTTGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKLVTAI*RLFASG
Trigger: CCCTGATGCAAACAACCTCCAGATTGCAGTGACTAG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATGTGAAACAGGCCTCTaGCTCATCGGAATTCATAGG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKCETGL*LIGIHR
Trigger: CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTTGGATTTTGTTCCCTaGTCGAGGAATTGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSELDFVP*SRNWLL
Trigger: CAAAAGCCAATTCCTCGACCAGGGAACAAAATCCAA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGGCAAGAGAGCAAGTTaGCAAGAATCCCTATTTCAA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEGKRAS*QESLFQ
Trigger: TTGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGGCAAGAGAGCAAGTTaGCAAGAATCCCTATTTCAA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFGKRAS*QESLFQ
Trigger: TTGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCTTGTGTATTTGATTaGTCGTGCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISSCVFD*SCPLAE
Trigger: TTCTGCCAGAGGGCACGACCAATCAAATACACAAGA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000645907.1
CDS-3UTR CCA 90 bp AAAATCATTCTTAGCTCCCAGGGCCACACAATAACAGGCATTGGACTGGCTTTGAAATGCATGAACATCTaGTTACATACCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KIILSSQGHTITGIGLALKCMNI*LHTTRF
Trigger: AAACCTGGTGGTATGTAACCAGATGTTCATGCATTT...CAAAGCCAGTCCAATGCCTGTTATTGTGTGGCCCTGGGAGCTAAGAATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645283.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAAGCAGGTGTGGCATTaGAACGGAAGATTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKKQVWH*NGRLFS
Trigger: GGAAAACAATCTTCCGTTTCAATGCCACACCTGCTT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGCTTCAGGTTTCCCATaGACAGCTGTAGTCCAATTA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKASGFP*TAVVQL
Trigger: TAATTGGACTACAGCTGTTCATGGGAAACCTGAAGC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATTCAGAAGAACTCTCTaGGAGGCCCATAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKFRRTL*EAHNSA
Trigger: AGCAGAATTATGGGCCTCTCAGAGAGTTCTTCTGAA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGGAAACTTTTTCTTCTaGTGCTGTCCTCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISGNFFF*CCPLIL
Trigger: CAGAATCAGAGGACAGCATCAGAAGAAAAAGTTTCC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGGAAACTTTTTCTTCTaGTGCTGTCCTCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAGNFFF*CCPLIL
Trigger: CAGAATCAGAGGACAGCATCAGAAGAAAAAGTTTCC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTATTCAGCATATCCTCTaGAAGGAGATAGGAACTACA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFIQHIL*KEIGTT
Trigger: TGTAGTTCCTATCTCCTTTCAGAGGATATGCTGAAT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGATTCAGCATATCCTCTaGAAGGAGATAGGAACTACA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEIQHIL*KEIGTT
Trigger: TGTAGTTCCTATCTCCTTTCAGAGGATATGCTGAAT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGGGATTGTGAATAAATaGTTGACCATCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEGIVNK*LTITVF
Trigger: GAAGACAGTGATGGTCAATCATTTATTCACAATCCC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGGGATTGTGAATAAATaGTTGACCATCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFGIVNK*LTITVF
Trigger: GAAGACAGTGATGGTCAATCATTTATTCACAATCCC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAACTTGCAGGAAACCGTaGCCCATCTGTGGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDETCRKP*PICGVN
Trigger: ATTAACACCACAGATGGGTCACGGTTTCCTGCAAGT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGAACGATTTGGAACTTaGCTTGCAGGAAACCGTGAC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEERFGT*LAGNRD
Trigger: GTCACGGTTTCCTGCAAGTCAAGTTCCAAATCGTTC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTTCCATCGCACATTTTaGCTAACATTCATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEFHRTF*LTFIRA
Trigger: TGCCCTTATGAATGTTAGTCAAAATGTGCGATGGAA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTTCCATCGCACATTTTaGCTAACATTCATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFFHRTF*LTFIRA
Trigger: TGCCCTTATGAATGTTAGTCAAAATGTGCGATGGAA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGTCATAAAGATGTCTTaGCCTCCAAGCTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFVIKMS*PPSFFF
Trigger: GAAAAAGAAGCTTGGAGGTCAAGACATCTTTATGAC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAAGGATTTGCAGACATaGACCTTTCTTCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAKDLQT*TFLPSV
Trigger: CACAGATGGAAGAAAGGTTCATGTCTGCAAATCCTT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAAGGATTTGCAGACATaGACCTTTCTTCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISKDLQT*TFLPSV
Trigger: CACAGATGGAAGAAAGGTTCATGTCTGCAAATCCTT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGTTTTAGTGTGGTTGTaGTGGGTTCATAGGACACTT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISVLVWL*WVHRTL
Trigger: AAGTGTCCTATGAACCCATCACAACCACACTAAAAC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTCATATTACATGATTTaGAAGCTTGCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESYYMI*KLAKHG
Trigger: CCCGTGTTTGGCAAGCTTTCAAATCATGTAATATGA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGACAGTAGGAACACTTaGAGCCAGGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEDSRNT*SQEFET
Trigger: AGTCTCAAACTCCTGGCTTCAAGTGTTCCTACTGTC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCATATGCAAAAACAATaGCGACAAAATCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFHMQKQ*RQNPAS
Trigger: ACTGGCTGGATTTTGTCGTCATTGTTTTTGCATATG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGAAAGTCTTTTTGTCTaGATAGTAGGGGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAESLFV*IVGVQV
Trigger: GACTTGGACCCCTACTATGCAGACAAAAAGACTTTC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCATAATCAGGGTTTCTaGCAATTTTCACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFHNQGF*QFSHRC
Trigger: ACACCTGTGTGAAAATTGGCAGAAACCCTGATTATG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCATAATCAGGGTTTCTaGCAATTTTCACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEHNQGF*QFSHRC
Trigger: ACACCTGTGTGAAAATTGGCAGAAACCCTGATTATG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTCTCCAAAAATGCTGTaGTCATCATCGGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESPKML*SSSANS
Trigger: TGAATTTGCCGATGATGAGCACAGCATTTTTGGAGA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGATCAAGAATTTGTGTaGAAATCTGTACCACCAAGG +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEDQEFV*KSVPPR
Trigger: CCTTGGTGGTACAGATTTGCACACAAATTCTTGATC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGATCAAGAATTTGTGTaGAAATCTGTACCACCAAGG +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFDQEFV*KSVPPR
Trigger: CCTTGGTGGTACAGATTTGCACACAAATTCTTGATC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAATCTGGAGGTTGTTTaGATCAGGGTCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFNLEVV*IRVFFN
Trigger: ATTGAAGAAGACCCTGATGCAAACAACCTCCAGATT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAGTATTCAGATCTTCTaGTTGTCTTATCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSIQIF*LSYLPG
Trigger: TCCAGGGAGATAAGACAAGCAGAAGATCTGAATACT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAAGGGTTATCAACTGTaGTGCACTCTGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEKGYQL*CTLRSL
Trigger: CAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAATTGCTCCTATGAGTaGATTCACAACGACCCTCAT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTANCSYE*IHNDPH
Trigger: ATGAGGGTCGTTGTGAATGCACTCATAGGAGCAATT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCACTTTGGAAGGATTTaGAGACATGAACCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEHFGRI*RHEPFF
Trigger: GAAGAAAGGTTCATGTCTGCAAATCCTTCCAAAGTG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGATCAGAGTTAGTGACTaGACTGCCTTCGAGAATATT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEIRVSD*TAFENI
Trigger: AATATTCTCGAAGGCAGTGCAGTCACTAACTCTGAT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGCCCAAGTTATTATCTaGTCAAGTATGTACCGTGGT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAAQVII*SSMYRG
Trigger: ACCACGGTACATACTTGAGCAGATAATAACTTGGGC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGTTCTTCAGTGTAACTaGCTTTCTGTATTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFVLQCN*LSVLLG
Trigger: ACCCAACAATACAGAAAGGCAGTTACACTGAAGAAC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGTTCTTCAGTGTAACTaGCTTTCTGTATTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEVLQCN*LSVLLG
Trigger: ACCCAACAATACAGAAAGGCAGTTACACTGAAGAAC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAATTGCTCCTATGAGTaGATTCACAACGACATCAAC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFNCSYE*IHNDIN
Trigger: GTTGATGTCGTTGTGAATGCACTCATAGGAGCAATT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644316.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGTCACTGCTTGGCTTTaGGGCTTCTTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEVTAWL*GFFIII
Trigger: GATGATGATGAAGAAGCCCCAAAGCCAAGCAGTGAC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATGTACTCGACATTTTTaGTCCAGTCCGGTGGGTTAT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKCTRHF*SSPVGY
Trigger: ATAACCCACCGGACTGGACCAAAAATGTCGAGTACA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACCTTTTCCTCTCCACTaGAGAGCTTCTTTTGATTCT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISPFPLH*RASFDS
Trigger: AGAATCAAAAGAAGCTCTCCAGTGGAGAGGAAAAGG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCCTTCGACACCAAGGTaGAAACTTTTTCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAPSTPR*KLFLLM
Trigger: CATCAGAAGAAAAAGTTTCCACCTTGGTGTCGAAGG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCTGTACCACCAAGGTaGACATTTTTGTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSVPPR*TFLSGL
Trigger: GAGTCCAGACAAAAATGTCCACCTTGGTGGTACAGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACTAGTCACTGCAATCTaGAGGTTGTTTGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDELVTAI*RLFASG
Trigger: CCCTGATGCAAACAACCTCCAGATTGCAGTGACTAG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATGTGAAACAGGCCTCTaGCTCATCGGAATTCATAGG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDECETGL*LIGIHR
Trigger: CCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTACATTCGGAACGATTTaGAACTTGACTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFTFGTI*NLTCRK
Trigger: TTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGACATTCGGAACGATTTaGAACTTGACTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSETFGTI*NLTCRK
Trigger: TTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCTTGTGTATTTGATTaGTCGTGCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSCVFD*SCPLAE
Trigger: TTCTGCCAGAGGGCACGACCAATCAAATACACAAGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACAAGAGACTGTTTTGTaGAATGGACAAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKQETVL*NGQSSE
Trigger: CTCAGAGCTTTGTCCATTTCACAAAACAGTCTCTTG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAATACGCAAAAACAATaGCGACAAAATCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISNTQKQ*RQNPAS
Trigger: ACTGGCTGGATTTTGTCGTCATTGTTTTTGCGTATT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGCTTCAGGTTTCCCATaGACAGCTGTAGTCCAATTA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEASGFP*TAVVQL
Trigger: TAATTGGACTACAGCTGTTCATGGGAAACCTGAAGC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAATTCAGCATATCCTCTaGAAGGAGATAGGAACTACA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISIQHIL*KEIGTT
Trigger: TGTAGTTCCTATCTCCTTTCAGAGGATATGCTGAAT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGGGATTGTGAATAAATaGTTGACCATCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAGIVNK*LTITVF
Trigger: GAAGACAGTGATGGTCAATCATTTATTCACAATCCC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGGGATTGTGAATAAATaGTTGACCATCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISGIVNK*LTITVF
Trigger: GAAGACAGTGATGGTCAATCATTTATTCACAATCCC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATTCCATCGCACATTTTaGCTAACATTCATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISFHRTF*LTFIRA
Trigger: TGCCCTTATGAATGTTAGTCAAAATGTGCGATGGAA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTTTTAGTGTGGTTGTaGTGGGTTCATAGGACACTT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVLVWL*WVHRTL
Trigger: AAGTGTCCTATGAACCCATCACAACCACACTAAAAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCTAATTACAATCCTGTaGAAAGATGACAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFLITIL*KDDKAD
Trigger: ATCTGCCTTGTCATCTTTTCACAGGATTGTAATTAG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTCATATTACATGATTTaGAAGCTTGCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTASYYMI*KLAKHG
Trigger: CCCGTGTTTGGCAAGCTTTCAAATCATGTAATATGA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATGGGGGAGGCAACATTaGCATCTTTTCATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEWGRQH*HLFILY
Trigger: ATACAGGATGAAAAGATGGCAATGTTGCCTCCCCCA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCATAATCAGGGTTTCTaGCAATTTTCACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAHNQGF*QFSHRC
Trigger: ACACCTGTGTGAAAATTGGCAGAAACCCTGATTATG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCTCCAAAAATGCTGTaGTCATCATCGGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISSPKML*SSSANS
Trigger: TGAATTTGCCGATGATGAGCACAGCATTTTTGGAGA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACATTGTCTCCAAAAATaGTGTGCTCATCATCGGCAA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKHCLQK*CAHHRQ
Trigger: TTGCCGATGATGAGCACAGCATTTTTGGAGACAATG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGATCAAGAATTTGTGTaGAAATCTGTACCACCAAGG +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISDQEFV*KSVPPR
Trigger: CCTTGGTGGTACAGATTTGCACACAAATTCTTGATC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAATCTGGAGGTTGTTTaGATCAGGGTCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTANLEVV*IRVFFN
Trigger: ATTGAAGAAGACCCTGATGCAAACAACCTCCAGATT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTTTAATTCTAGTCACTaGAATCTGGAGGTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFFNSSH*NLEVVC
Trigger: GCAAACAACCTCCAGATTGCAGTGACTAGAATTAAA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAGTATTCAGATCTTCTaGTTGTCTTATCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTASIQIF*LSYLPG
Trigger: TCCAGGGAGATAAGACAAGCAGAAGATCTGAATACT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGGAAATTGTGACCTTTaGTCATTTCAGCAAGTGTAT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEGNCDL*SFQQVY
Trigger: ATACACTTGCTGAAATGAGCAAAGGTCACAATTTCC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAGTGAAGATCTTGTCTaGATACTCCAGGATAATCTT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESEDLV*ILQDNL
Trigger: AAGATTATCCTGGAGTATGCAGACAAGATCTTCACT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAGTGAAGATCTTGTCTaGATACTCCAGGATAATCTT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSEDLV*ILQDNL
Trigger: AAGATTATCCTGGAGTATGCAGACAAGATCTTCACT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACATGATGGAAGGAATTaGTCCTATGAGTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKHDGRN*SYECIH
Trigger: GTGAATGCACTCATAGGAGCAATTCCTTCCATCATG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAACAGAATCCACTGCTaGATACATAATAATCGTCCA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFNRIHC*IHNNRP
Trigger: TGGACGATTATTATGTATGCAGCAGTGGATTCTGTT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACACTTTGGAAGGATTTaGAGACATGAACCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISHFGRI*RHEPFF
Trigger: GAAGAAAGGTTCATGTCTGCAAATCCTTCCAAAGTG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCACTTTGGAAGGATTTaGAGACATGAACCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAHFGRI*RHEPFF
Trigger: GAAGAAAGGTTCATGTCTGCAAATCCTTCCAAAGTG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAATCAGAGTTAGTGACTaGACTGCCTTCGAGAATATT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISIRVSD*TAFENI
Trigger: AATATTCTCGAAGGCAGTGCAGTCACTAACTCTGAT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGATCAGAGTTAGTGACTaGACTGCCTTCGAGAATATT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAIRVSD*TAFENI
Trigger: AATATTCTCGAAGGCAGTGCAGTCACTAACTCTGAT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCATGATTTGAAAGCTTaGCAAACACGGGATTGTATA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFHDLKA*QTRDCI
Trigger: TATACAATCCCGTGTTTGGCAAGCTTTCAAATCATG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCATGATTTGAAAGCTTaGCAAACACGGGATTGTATA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEHDLKA*QTRDCI
Trigger: TATACAATCCCGTGTTTGGCAAGCTTTCAAATCATG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAGTCTCGGAAAACACTaGATGGTGTCTTTCATATTA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESLGKH*MVSFIL
Trigger: TAATATGAAAGACACCATGCAGTGTTTTCCGAGACT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGACATTCGGAACGATTTaGAACTTGACTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTATFGTI*NLTCRK
Trigger: TTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATTGGATTTTGTTCCCTaGTCGAGGAATTGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKLDFVP*SRNWLL
Trigger: CAAAAGCCAATTCCTCGACCAGGGAACAAAATCCAA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTCAAATATACATCCTTaGATTTTGTTCCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSNIHP*ILFPGR
Trigger: TCGACCAGGGAACAAAATCCAAGGATGTATATTTGA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAAGTCTTATCCTTGTTaGCATGTGAGTCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEKSYPC*HVSQDE
Trigger: TTCATCTTGACTCACATGCCAACAAGGATAAGACTT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGGCAAGAGAGCAAGTTaGCAAGAATCCCTATTTCAA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKGKRAS*QESLFQ
Trigger: TTGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCTTGTGTATTTGATTaGTCGTGCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESCVFD*SCPLAE
Trigger: TTCTGCCAGAGGGCACGACCAATCAAATACACAAGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAATACGCAAAAACAATaGCGACAAAATCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKNTQKQ*RQNPAS
Trigger: ACTGGCTGGATTTTGTCGTCATTGTTTTTGCGTATT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGGAAACTTTTTCTTCTaGTGCTGTCCTCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEGNFFF*CCPLIL
Trigger: CAGAATCAGAGGACAGCATCAGAAGAAAAAGTTTCC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAATTCAGCATATCCTCTaGAAGGAGATAGGAACTACA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKIQHIL*KEIGTT
Trigger: TGTAGTTCCTATCTCCTTTCAGAGGATATGCTGAAT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGTTTTAGTGTGGTTGTaGTGGGTTCATAGGACACTT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEVLVWL*WVHRTL
Trigger: AAGTGTCCTATGAACCCATCACAACCACACTAAAAC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCTAATTACAATCCTGTaGAAAGATGACAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTALITIL*KDDKAD
Trigger: ATCTGCCTTGTCATCTTTTCACAGGATTGTAATTAG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCATATTACATGATTTaGAAGCTTGCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSYYMI*KLAKHG
Trigger: CCCGTGTTTGGCAAGCTTTCAAATCATGTAATATGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGTCTGTCATATTACATaGTTTGAAAGCTTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAVCHIT*FESLPN
Trigger: GTTTGGCAAGCTTTCAAATCATGTAATATGACAGAC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGTCTGTCATATTACATaGTTTGAAAGCTTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISVCHIT*FESLPN
Trigger: GTTTGGCAAGCTTTCAAATCATGTAATATGACAGAC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACCCATGGTACTGTGTTaGTTGAGGCAAAATATATTT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISPMVLC*LRQNIF
Trigger: AAATATATTTTGCCTCAATCAACACAGTACCATGGG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCCCATGGTACTGTGTTaGTTGAGGCAAAATATATTT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAPMVLC*LRQNIF
Trigger: AAATATATTTTGCCTCAATCAACACAGTACCATGGG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACATATGCAAAAACAATaGCGACAAAATCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKHMQKQ*RQNPAS
Trigger: ACTGGCTGGATTTTGTCGTCATTGTTTTTGCATATG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGAAAGTCTTTTTGTCTaGATAGTAGGGGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEESLFV*IVGVQV
Trigger: GACTTGGACCCCTACTATGCAGACAAAAAGACTTTC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCTCCAAAAATGCTGTaGTCATCATCGGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSPKML*SSSANS
Trigger: TGAATTTGCCGATGATGAGCACAGCATTTTTGGAGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACATTGTCTCCAAAAATaGTGTGCTCATCATCGGCAA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEHCLQK*CAHHRQ
Trigger: TTGCCGATGATGAGCACAGCATTTTTGGAGACAATG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGATCAAGAATTTGTGTaGAAATCTGTACCACCAAGG +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKDQEFV*KSVPPR
Trigger: CCTTGGTGGTACAGATTTGCACACAAATTCTTGATC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAATCTGGAGGTTGTTTaGATCAGGGTCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKNLEVV*IRVFFN
Trigger: ATTGAAGAAGACCCTGATGCAAACAACCTCCAGATT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTTTAATTCTAGTCACTaGAATCTGGAGGTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAFNSSH*NLEVVC
Trigger: GCAAACAACCTCCAGATTGCAGTGACTAGAATTAAA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAGTATTCAGATCTTCTaGTTGTCTTATCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSIQIF*LSYLPG
Trigger: TCCAGGGAGATAAGACAAGCAGAAGATCTGAATACT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGGAAATTGTGACCTTTaGTCATTTCAGCAAGTGTAT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAGNCDL*SFQQVY
Trigger: ATACACTTGCTGAAATGAGCAAAGGTCACAATTTCC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGGAAATTGTGACCTTTaGTCATTTCAGCAAGTGTAT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISGNCDL*SFQQVY
Trigger: ATACACTTGCTGAAATGAGCAAAGGTCACAATTTCC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGGTTTAATCTCACTTTaGTGTATTCACTATCCGAAT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEGLISL*CIHYPN
Trigger: ATTCGGATAGTGAATACAGCAAAGTGAGATTAAACC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAATTGCTCCTATGAGTaGATTCACAACGACCCTCAT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDENCSYE*IHNDPH
Trigger: ATGAGGGTCGTTGTGAATGCACTCATAGGAGCAATT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACATGATGGAAGGAATTaGTCCTATGAGTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEHDGRN*SYECIH
Trigger: GTGAATGCACTCATAGGAGCAATTCCTTCCATCATG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAACAGAATCCACTGCTaGATACATAATAATCGTCCA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISNRIHC*IHNNRP
Trigger: TGGACGATTATTATGTATGCAGCAGTGGATTCTGTT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACACTTTGGAAGGATTTaGAGACATGAACCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKHFGRI*RHEPFF
Trigger: GAAGAAAGGTTCATGTCTGCAAATCCTTCCAAAGTG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTATCAAGCATTTCATTaGAAAGCCAAGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFYQAFH*KAKANT
Trigger: AGTATTTGCCTTGGCTTTGCAATGAAATGCTTGATA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTATCAAGCATTTCATTaGAAAGCCAAGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEYQAFH*KAKANT
Trigger: AGTATTTGCCTTGGCTTTGCAATGAAATGCTTGATA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGGTCAAACAACTAACTaGATATCAGGAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAGQTTN*ISGRIS
Trigger: TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGCCCAAGTTATTATCTaGTCAAGTATGTACCGTGGT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEAQVII*SSMYRG
Trigger: ACCACGGTACATACTTGAGCAGATAATAACTTGGGC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAGTCTCGGAAAACACTaGATGGTGTCTTTCATATTA +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTASLGKH*MVSFIL
Trigger: TAATATGAAAGACACCATGCAGTGTTTTCCGAGACT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACCTTTTCCTCTCCACTaGAGAGCTTCTTTTGATTCT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEPFPLH*RASFDS
Trigger: AGAATCAAAAGAAGCTCTCCAGTGGAGAGGAAAAGG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACCTTCGACACCAAGGTaGAAACTTTTTCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEPSTPR*KLFLLM
Trigger: CATCAGAAGAAAAAGTTTCCACCTTGGTGTCGAAGG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAACATTCGGAACGATTTaGAACTTGACTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKTFGTI*NLTCRK
Trigger: TTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATTGGATTTTGTTCCCTaGTCGAGGAATTGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDELDFVP*SRNWLL
Trigger: CAAAAGCCAATTCCTCGACCAGGGAACAAAATCCAA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAAATATACATCCTTaGATTTTGTTCCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISSNIHP*ILFPGR
Trigger: TCGACCAGGGAACAAAATCCAAGGATGTATATTTGA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCTATTATCAGTATTTTaGGCAGCACAGTCAAATGTT +
Preference number: 4 (lower is better)
Translates to: PTFLRKSELVTALPSRIFLLSVF*AAQSNV
Trigger: AACATTTGACTGTGCTGCCCAAAATACTGATAATAG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGGCAAGAGAGCAAGTTaGCAAGAATCCCTATTTCAA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEGKRAS*QESLFQ
Trigger: TTGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR CAA 72 bp ACACATGGCTATAAGGTGCGGGACCAGTCCTTTCATTaGCCTTGGTCCATTATTAACTTCATTTTTGTTATT +
Preference number: 4 (lower is better)
Translates to: THGYKVRDQSFH*PWSIINFIFVI
Trigger: AATAACAAAAATGAAGTTAATAATGGACCAAGGCAAATGAAAGGACTGGTCCCGCACCTTATAGCCATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645283.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAATACGCAAAAACAATaGCGACAAAATCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDENTQKQ*RQNPAS
Trigger: ACTGGCTGGATTTTGTCGTCATTGTTTTTGCGTATT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGTCATAAAGATGTCTTaGCCTCCAAGCTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEVIKMS*PPSFFF
Trigger: GAAAAAGAAGCTTGGAGGTCAAGACATCTTTATGAC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACTAATTACAATCCTGTaGAAAGATGACAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKLITIL*KDDKAD
Trigger: ATCTGCCTTGTCATCTTTTCACAGGATTGTAATTAG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCATATTACATGATTTaGAAGCTTGCCAAACACGGG +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESYYMI*KLAKHG
Trigger: CCCGTGTTTGGCAAGCTTTCAAATCATGTAATATGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTCTGTCATATTACATaGTTTGAAAGCTTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVCHIT*FESLPN
Trigger: GTTTGGCAAGCTTTCAAATCATGTAATATGACAGAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACATAATCAGGGTTTCTaGCAATTTTCACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEHNQGF*QFSHRC
Trigger: ACACCTGTGTGAAAATTGGCAGAAACCCTGATTATG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCTCCAAAAATGCTGTaGTCATCATCGGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESPKML*SSSANS
Trigger: TGAATTTGCCGATGATGAGCACAGCATTTTTGGAGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATTTAATTCTAGTCACTaGAATCTGGAGGTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKFNSSH*NLEVVC
Trigger: GCAAACAACCTCCAGATTGCAGTGACTAGAATTAAA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAGTATTCAGATCTTCTaGTTGTCTTATCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESIQIF*LSYLPG
Trigger: TCCAGGGAGATAAGACAAGCAGAAGATCTGAATACT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp TTAACTTGGCAGCATGAGAACCTCCATACACAACCTGGCTTATTTCTTGAGAAAGGTTTAATCTCACTTTaGTGTATTCACTATCCGAAT +
Preference number: 4 (lower is better)
Translates to: LTWQHENLHTQPGLFLEKGLISL*CIHYPN
Trigger: ATTCGGATAGTGAATACAGCAAAGTGAGATTAAACC...TTTCTCAAGAAATAAGCCAGGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAGTGAAGATCTTGTCTaGATACTCCAGGATAATCTT +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSEDLV*ILQDNL
Trigger: AAGATTATCCTGGAGTATGCAGACAAGATCTTCACT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAACAGAATCCACTGCTaGATACATAATAATCGTCCA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKNRIHC*IHNNRP
Trigger: TGGACGATTATTATGTATGCAGCAGTGGATTCTGTT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACACTTTGGAAGGATTTaGAGACATGAACCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEHFGRI*RHEPFF
Trigger: GAAGAAAGGTTCATGTCTGCAAATCCTTCCAAAGTG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTATCAAGCATTTCATTaGAAAGCCAAGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: GQTTNCISGRISSTLLTAYQAFH*KAKANT
Trigger: AGTATTTGCCTTGGCTTTGCAATGAAATGCTTGATA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGGTCAAACAACTAACTaGATATCAGGAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKGQTTN*ISGRIS
Trigger: TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAACATTCGGAACGATTTaGAACTTGACTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDETFGTI*NLTCRK
Trigger: TTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAAGTCTTATCCTTGTTaGCATGTGAGTCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKKSYPC*HVSQDE
Trigger: TTCATCTTGACTCACATGCCAACAAGGATAAGACTT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACTATTATCAGTATTTTaGGCAGCACAGTCAAATGTT +
Preference number: 4 (lower is better)
Translates to: CSSMYRGQTTNCISGRISLLSVF*AAQSNV
Trigger: AACATTTGACTGTGCTGCCCAAAATACTGATAATAG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGTCTGTCATATTACATaGTTTGAAAGCTTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEVCHIT*FESLPN
Trigger: GTTTGGCAAGCTTTCAAATCATGTAATATGACAGAC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR TCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACCCATGGTACTGTGTTaGTTGAGGCAAAATATATTT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEPMVLC*LRQNIF
Trigger: AAATATATTTTGCCTCAATCAACACAGTACCATGGG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATTTAATTCTAGTCACTaGAATCTGGAGGTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEFNSSH*NLEVVC
Trigger: GCAAACAACCTCCAGATTGCAGTGACTAGAATTAAA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGGAAATTGTGACCTTTaGTCATTTCAGCAAGTGTAT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEGNCDL*SFQQVY
Trigger: ATACACTTGCTGAAATGAGCAAAGGTCACAATTTCC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAACAGAATCCACTGCTaGATACATAATAATCGTCCA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDENRIHC*IHNNRP
Trigger: TGGACGATTATTATGTATGCAGCAGTGGATTCTGTT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGGTCAAACAACTAACTaGATATCAGGAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEGQTTN*ISGRIS
Trigger: TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACATGATTTGAAAGCTTaGCAAACACGGGATTGTATA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEHDLKA*QTRDCI
Trigger: TATACAATCCCGTGTTTGGCAAGCTTTCAAATCATG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAGTCTCGGAAAACACTaGATGGTGTCTTTCATATTA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESLGKH*MVSFIL
Trigger: TAATATGAAAGACACCATGCAGTGTTTTCCGAGACT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCAAATATACATCCTTaGATTTTGTTCCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESNIHP*ILFPGR
Trigger: TCGACCAGGGAACAAAATCCAAGGATGTATATTTGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAAGTCTTATCCTTGTTaGCATGTGAGTCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEKSYPC*HVSQDE
Trigger: TTCATCTTGACTCACATGCCAACAAGGATAAGACTT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGGTTTAATCTCACTTTaGTGTATTCACTATCCGAAT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEGLISL*CIHYPN
Trigger: ATTCGGATAGTGAATACAGCAAAGTGAGATTAAACC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR GCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATATCAAGCATTTCATTaGAAAGCCAAGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEYQAFH*KAKANT
Trigger: AGTATTTGCCTTGGCTTTGCAATGAAATGCTTGATA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CCA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACTATTATCAGTATTTTaGGCAGCACAGTCAAATGTT +
Preference number: 4 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDELLSVF*AAQSNV
Trigger: AACATTTGACTGTGCTGCCCAAAATACTGATAATAG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
3UTR CAA 72 bp ACACATATCTGTGTAAAGTCTGTCATATTACATGATTaGAAAGCTTGCCAAACACGGGATTGTATACAAGTG +
Preference number: 4 (lower is better)
Translates to: THICVKSVILHD*KACQTRDCIQV
Trigger: CACTTGTATACAATCCCGTGTTTGGCAAGCTTTCAAATCATGTAATATGACAGACTTTACACAGATATGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS CCA 90 bp GCCGAGCTGGCGGAATTGGAAAGCCGACAGCCGCCGCTGGAGCGCTaGCGACCGCCTGCAAGCAGACTGCGCCCCTCCTGCCAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: AELAELESRQPPLER*RPPASRLRPSCQGA
Trigger: CGCGCCCTGGCAGGAGGGGCGCAGTCTGCTTGCAGGCGGTCGCCAGCGCTCCAGCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000454569.6
ENST00000472119.2
CDS GCA 90 bp GGAATTGGAAAGCCGACAGCCGCCGCTGGAGCGCTGGCGACCGCCTaGAAGCAGACTGCGCCCCTCCTGCCAGGGCGCGCCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GIGKPTAAAGALATA*KQTAPLLPGRARGG
Trigger: ACCTCCACGGGCGCGCCCTGGCAGGAGGGGCGCAGTCTGCTTGCAGGCGGTCGCCAGCGCTCCAGCGGCGGCTGTCGGCTTTCCAATTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000472119.2
CDS CCA 90 bp CAGCCTCAGCCGAGCTGGCGGAATTGGAAAGCCGACAGCCGCCGCTaGAGCGCTGGCGACCGCCTGCAAGCAGACTGCGCCCCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: QPQPSWRNWKADSRR*SAGDRLQADCAPPA
Trigger: GGCAGGAGGGGCGCAGTCTGCTTGCAGGCGGTCGCCAGCGCTCCAGCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGGCTGAGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000454569.6
ENST00000472119.2
CDS CCA 90 bp CCACTGGCACCCAGGCTAGCCCAGCCTCAGCCGAGCTGGCGGAATTaGAAAGCCGACAGCCGCCGCTGGAGCGCTGGCGACCGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: PLAPRLAQPQPSWRN*KADSRRWSAGDRLQ
Trigger: TTGCAGGCGGTCGCCAGCGCTCCAGCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGGCTGAGGCTGGGCTAGCCTGGGTGCCAGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409672.5
ENST00000452182.2
ENST00000454569.6
ENST00000472119.2
ENST00000642356.2
CDS CCA 90 bp AGGCCTAGCCCGCCGATCATCCCCACCCAGTGCACCTGCAGAATCTaGCTCCAGGAGAGGGCGCGGGCCTCTCCTTCCCCGGCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RPSPPIIPTQCTCRI*LQERARASPSPALS
Trigger: AGAGAGCGCCGGGGAAGGAGAGGCCCGCGCCCTCTCCTGGAGCCAGATTCTGCAGGTGCACTGGGTGGGGATGATCGGCGGGCTAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303354.11
ENST00000645907.1
CDS CCA 90 bp CAACCTAGCCCGCCGATCATCCCCACCCAGTGCACCTGCAGAATCTaGCTCCAGGAGAGGGCGCGGGCCTCTCCTTCCCCGGCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: QPSPPIIPTQCTCRI*LQERARASPSPALS
Trigger: AGAGAGCGCCGGGGAAGGAGAGGCCCGCGCCCTCTCCTGGAGCCAGATTCTGCAGGTGCACTGGGTGGGGATGATCGGCGGGCTAGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409672.5
ENST00000454569.6
ENST00000472119.2
ENST00000642356.2
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGCCGAGCTGGCGGAATaGGAAAGCCGACAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFAELAE*ESRQPP
Trigger: CGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGGC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGCCGAGCTGGCGGAATaGGAAAGCCGACAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEAELAE*ESRQPP
Trigger: CGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGGC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTTCTCTGGGCTCCTGTaGCTCAGGGGACGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEFSGLL*LRGRLP
Trigger: CGGCAGGCGTCCCCTGAGCAACAGGAGCCCAGAGAA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTTCTCTGGGCTCCTGTaGCTCAGGGGACGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFFSGLL*LRGRLP
Trigger: CGGCAGGCGTCCCCTGAGCAACAGGAGCCCAGAGAA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATCCTGTCATCTGTGAACGTTCACCGGCAGCATaGGTGGGGACCTACTGGCTT +
Preference number: 5 (lower is better)
Translates to: EASQKTIWILVQYPVICERSPAA*VGTYWL
Trigger: AAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAACG...TTCACAGATGACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp GAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATCCTGTCATCTGTGAAGGCAGAAGCTGTCCATaGGGGAGCATGAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: EASQKTIWILVQYPVICEGRSCP*GSMRAE
Trigger: CTCAGCCCTCATGCTCCCCAATGGACAGCTTCTGCC...TTCACAGATGACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTTCTCTGGGCTCCTGTaGCTCAGGGGACGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTAFSGLL*LRGRLP
Trigger: CGGCAGGCGTCCCCTGAGCAACAGGAGCCCAGAGAA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GAGATCAGTAGAGGCTTCCCAGAAAACCATTTGGATTCTGGTCCAGTATCCTGTTGGGGACCTACTGGCTaGGCTGATGTTACTGCTGCG +
Preference number: 5 (lower is better)
Translates to: EISRGFPENHLDSGPVSCWGPTG*ADVTAA
Trigger: CGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCCA...ACAGGATACTGGACCAGAATCCAAATGGTTTTCTGGGAAGCCTCTACTGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCGTTCACCGGCAGCATaGGTGGGGACCTACTGGCTT +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSERSPAA*VGTYWL
Trigger: AAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAACG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCGTTCACCGGCAGCATaGGTGGGGACCTACTGGCTT +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFRSPAA*VGTYWL
Trigger: AAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAACG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGGCAGAAGCTGTCCATaGGGGAGCATGAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFGRSCP*GSMRAE
Trigger: CTCAGCCCTCATGCTCCCCAATGGACAGCTTCTGCC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGGCAGAAGCTGTCCATaGGGGAGCATGAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEGRSCP*GSMRAE
Trigger: CTCAGCCCTCATGCTCCCCAATGGACAGCTTCTGCC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAGGCAGGAGGGTTGCTaGAGCCCAGAGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFRQEGC*SPELRL
Trigger: CAGCCTCAACTCTGGGCTCAAGCAACCCTCCTGCCT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTGGGGACCTACTGGCTaGGCTGATGTTACTGCTGCG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFWGPTG*ADVTAA
Trigger: CGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCCA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTGGGGACCTACTGGCTaGGCTGATGTTACTGCTGCG +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEWGPTG*ADVTAA
Trigger: CGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCCA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACGTTCACCGGCAGCATaGGTGGGGACCTACTGGCTT +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISRSPAA*VGTYWL
Trigger: AAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAACG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCGTTCACCGGCAGCATaGGTGGGGACCTACTGGCTT +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTARSPAA*VGTYWL
Trigger: AAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAACG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCCTCACATAAGAGGCTaGCAACCTAGCCCGCCGATC +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEPHIRG*QPSPPI
Trigger: GATCGGCGGGCTAGGTTGCAAGCCTCTTATGTGAGG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp GTGCTGCACTCTGAGGAGCTTGACCGGTTTAATCTCTGTGTAAAAGTGGTGACATGCACTCTGAGGAGCTaGACCGGTTTAATCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VLHSEELDRFNLCVKVVTCTLRS*TGLISV
Trigger: CACAGAGATTAAACCGGTCAAGCTCCTCAGAGTGCA...TGTCACCACTTTTACACAGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643319.1
CDS-3UTR CAA 90 bp GGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCCCTTTTAGAGCTCAGTTaGGATGTTTCAGAAGAACTC +
Preference number: 5 (lower is better)
Translates to: GLWLIGIHRFSLCFFSFSLLELS*DVSEEL
Trigger: GAGTTCTTCTGAAACATCCAAACTGAGCTCTAAAAG...GGAGAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGGCAGAAGCTGTCCATaGGGGAGCATGAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKGRSCP*GSMRAE
Trigger: CTCAGCCCTCATGCTCCCCAATGGACAGCTTCTGCC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTGCTTGAGCCCAGAGTaGAGGCTGCAGAGAGCTATG +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSECLSPE*RLQRAM
Trigger: CATAGCTCTCTGCAGCCTCAACTCTGGGCTCAAGCA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACCTCACATAAGAGGCTaGCAACCTAGCCCGCCGATC +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISPHIRG*QPSPPI
Trigger: GATCGGCGGGCTAGGTTGCAAGCCTCTTATGTGAGG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp GTGAAACAGGCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTTTCCCAGAAAACCATTaGGATTCTGGTCCAGTATCC +
Preference number: 5 (lower is better)
Translates to: VKQASGSSEFIGSASASSFPENH*DSGPVS
Trigger: GGATACTGGACCAGAATCCAAATGGTTTTCTGGGAA...AGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS TCA 90 bp GTGCTCGCCTATGCCCTTCGACACCAAGGTGGAAACTTTTTCTTCTaGTGCTGTCCTCTGATTCTGATTTCGACAATTTCTCAGCATCTC +
Preference number: 5 (lower is better)
Translates to: VLAYALRHQGGNFFF*CCPLILISTISQHL
Trigger: GAGATGCTGAGAAATTGTCGAAATCAGAATCAGAGGACAGCATCAGAAGAAAAAGTTTCCACCTTGGTGTCGAAGGGCATAGGCGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000454569.6
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
ENST00000667201.2
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTATGAAGGGCAGCTGTTaGCCAGCTTCCAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFMKGSC*PASKSL
Trigger: CAGTGACTTGGAAGCTGGCAAACAGCTGCCCTTCAT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGATGAAGGGCAGCTGTTaGCCAGCTTCCAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEMKGSC*PASKSL
Trigger: CAGTGACTTGGAAGCTGGCAAACAGCTGCCCTTCAT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp AGGAGCTTGACCGGTTTAATCTCACTTTGCTGTATTCACTATCCGAATCACTGCAGCACGCAGCGTCTGTaGGTAAAGGTTTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: RSLTGLISLCCIHYPNHCSTQRL*VKVFPV
Trigger: TACTGGGAAAACCTTTACCAACAGACGCTGCGTGCT...GCAGTGATTCGGATAGTGAATACAGCAAAGTGAGATTAAACCGGTCAAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp GCCTCTGGCTCATCGGAATTCATAGGTTCAGCCTCTGCTTCTTCTCCTTCTCCACGGTTTAATCTCACTTaGCTGTATTCACTATCCGAA +
Preference number: 5 (lower is better)
Translates to: ASGSSEFIGSASASSPSPRFNLT*LYSLSE
Trigger: TTCGGATAGTGAATACAGCAAAGTGAGATTAAACCG...TGGAGAAGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGCTATGATCATGCCATaGCACTCTAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFAMIMP*HSSLGD
Trigger: GTCACCCAGGCTAGAGTGCAATGGCATGATCATAGC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTGCTTGAGCCCAGAGTaGAGGCTGCAGAGAGCTATG +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTACLSPE*RLQRAM
Trigger: CATAGCTCTCTGCAGCCTCAACTCTGGGCTCAAGCA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAGGCAGGAGGGTTGCTaGAGCCCAGAGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDERQEGC*SPELRL
Trigger: CAGCCTCAACTCTGGGCTCAAGCAACCCTCCTGCCT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp CCTTTCCCTGACTCTATGTTAACTTGGCAGCATGAGAACCTCCATACACAACCTCCTTTTCTTGTGTATTaGATTGGTCGTGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PFPDSMLTWQHENLHTQPPFLVY*IGRALW
Trigger: CCAGAGGGCACGACCAATCAAATACACAAGAAAAGG...AGGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGATGAAGGGCAGCTGTTaGCCAGCTTCCAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTAMKGSC*PASKSL
Trigger: CAGTGACTTGGAAGCTGGCAAACAGCTGCCCTTCAT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AGTGTTATATTGAAGAAACACTGCCATCAGACTCCAGCAATGTGGTTCCAATGTATGAAGGGCAGCTGTTaGCCAGCTTCCAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: SVILKKHCHQTPAMWFQCMKGSC*PASKSL
Trigger: CAGTGACTTGGAAGCTGGCAAACAGCTGCCCTTCAT...ACATTGGAACCACATTGCTGGAGTCTGATGGCAGTGTTTCTTCAATATAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGTGTACTCGACATTTTaGGTCCAGTCCGGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEVYSTF*VQSGGL
Trigger: TAACCCACCGGACTGGACCAAAAATGTCGAGTACAC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAGCACGCAGCGTCTGTaGGTAAAGGTTTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESTQRL*VKVFPV
Trigger: TACTGGGAAAACCTTTACCAACAGACGCTGCGTGCT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAGCACGCAGCGTCTGTaGGTAAAGGTTTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSTQRL*VKVFPV
Trigger: TACTGGGAAAACCTTTACCAACAGACGCTGCGTGCT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATGGGGACCTACTGGCTaGGCTGATGTTACTGCTGCG +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEWGPTG*ADVTAA
Trigger: CGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCCA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AGGAGCTTGACCGGTTTAATCTCACTTTGCTGTATTCACTATCCGAATCACTGCTGCACTCTGAGGAGCTaGACCGGTTTAATCTCACTT +
Preference number: 5 (lower is better)
Translates to: RSLTGLISLCCIHYPNHCCTLRS*TGLISL
Trigger: AAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCA...GCAGTGATTCGGATAGTGAATACAGCAAAGTGAGATTAAACCGGTCAAGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATGCTTGAGCCCAGAGTaGAGGCTGCAGAGAGCTATG +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKCLSPE*RLQRAM
Trigger: CATAGCTCTCTGCAGCCTCAACTCTGGGCTCAAGCA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp CTTACACATGGCTATAAGGTGCGGGACCAGTCCTTTCATTTGCCTTGGTCCATTGACCAGTCCTTTCATTaGCCTTGGTCCATTATTAAC +
Preference number: 5 (lower is better)
Translates to: LTHGYKVRDQSFHLPWSIDQSFH*PWSIIN
Trigger: GTTAATAATGGACCAAGGCAAATGAAAGGACTGGTC...AATGGACCAAGGCAAATGAAAGGACTGGTCCCGCACCTTATAGCCATGTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645283.1
CDS-3UTR CAA 90 bp CAGTGTTATATTGAAGAAACACTGCCATCAGACTCCAGCAATGTGGTTCCAATGAGTCACTGCTTGGCTTaGGGGCTTCTTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: QCYIEETLPSDSSNVVPMSHCLA*GLLHHH
Trigger: ATGATGATGAAGAAGCCCCAAAGCCAAGCAGTGACT...CATTGGAACCACATTGCTGGAGTCTGATGGCAGTGTTTCTTCAATATAACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAATGAAGGGCAGCTGTTaGCCAGCTTCCAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKMKGSC*PASKSL
Trigger: CAGTGACTTGGAAGCTGGCAAACAGCTGCCCTTCAT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGTGTACTCGACATTTTaGGTCCAGTCCGGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISVYSTF*VQSGGL
Trigger: TAACCCACCGGACTGGACCAAAAATGTCGAGTACAC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTCAAAGCCCCTACAATaGTCTTCAGGCCTGGGATTA +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSKPLQ*SSGLGL
Trigger: TAATCCCAGGCCTGAAGACAATTGTAGGGGCTTTGA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAGCACGCAGCGTCTGTaGGTAAAGGTTTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTASTQRL*VKVFPV
Trigger: TACTGGGAAAACCTTTACCAACAGACGCTGCGTGCT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAGCACGCAGCGTCTGTaGGTAAAGGTTTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISSTQRL*VKVFPV
Trigger: TACTGGGAAAACCTTTACCAACAGACGCTGCGTGCT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCCTTTTCTTGTGTATTaGATTGGTCGTGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEPFLVY*IGRAAV
Trigger: GACAGCGGCACGACCAATCAAATACACAAGAAAAGG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303354.11
ENST00000642356.2
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGACTGCAATCTGGAGGTaGTTTGCATCAGGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSETAIWR*FASGSS
Trigger: AGAAGACCCTGATGCAAACAACCTCCAGATTGCAGT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTACTGCAATCTGGAGGTaGTTTGCATCAGGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFTAIWR*FASGSS
Trigger: AGAAGACCCTGATGCAAACAACCTCCAGATTGCAGT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTGCACTCTGAGGAGCTaGACCGGTTTAATCTCACTT +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSECTLRS*TGLISL
Trigger: AAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTGCACTCTGAGGAGCTaGACCGGTTTAATCTCACTT +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFCTLRS*TGLISL
Trigger: AAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGGATTTGGAACTTGACTaGCAGGAAACCGTGACCCAT +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEDLELD*QETVTH
Trigger: ATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATC...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGATTTGGAACTTGACTaGCAGGAAACCGTGACCCAT +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFDLELD*QETVTH
Trigger: ATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCCTTTTCTTGTGTATTaGATTGGTCGTGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFPFLVY*IGRALW
Trigger: CCAGAGGGCACGACCAATCAAATACACAAGAAAAGG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACTGGGGGAGGCAACATaGCCATCTTTTCATCCTGTA +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKLGEAT*PSFHPV
Trigger: TACAGGATGAAAAGATGGCAATGTTGCCTCCCCCAG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTCTTTCAGCAATGCGTaGTTCAATGAGGGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESFSNA*FNEGKR
Trigger: TCTCTTGCCCTCATTGAACAACGCATTGCTGAAAGA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TCTACATGGCAGTGTTATATTGAAGAAACACTGCCATCAGACTCCAGCAATGTGTCTTTCAGCAATGCGTaGTTCAATGAGGGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: STWQCYIEETLPSDSSNVSFSNA*FNEGKR
Trigger: TCTCTTGCCCTCATTGAACAACGCATTGCTGAAAGA...CACATTGCTGGAGTCTGATGGCAGTGTTTCTTCAATATAACACTGCCATGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR CAA 90 bp GTCATCAACGCATCTATCAATGTCACCTTGGCCAATGAACTCCAAGTCCACTTCCTTCTTTGGGTTCCTTaGATTTTCTTTCAGCAATGC +
Preference number: 5 (lower is better)
Translates to: VINASINVTLANELQVHFLLWVP*IFFQQC
Trigger: GCATTGCTGAAAGAAAATCAAAGGAACCCAAAGAAG...GAAGTGGACTTGGAGTTCATTGGCCAAGGTGACATTGATAGATGCGTTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAGTCACTGCTTGGCTTaGGGGCTTCTTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTASHCLA*GLLHHH
Trigger: ATGATGATGAAGAAGCCCCAAAGCCAAGCAGTGACT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAATGAAGGGCAGCTGTTaGCCAGCTTCCAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEMKGSC*PASKSL
Trigger: CAGTGACTTGGAAGCTGGCAAACAGCTGCCCTTCAT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTGTACTCGACATTTTaGGTCCAGTCCGGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVYSTF*VQSGGL
Trigger: TAACCCACCGGACTGGACCAAAAATGTCGAGTACAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAAAGCCCCTACAATaGTCTTCAGGCCTGGGATTA +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISSKPLQ*SSGLGL
Trigger: TAATCCCAGGCCTGAAGACAATTGTAGGGGCTTTGA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp GGTTATCAACTGTGCTGCACTCTGAGGAGCTTGACCGGTTTAATCTCACTTTGCTCTCTTCCTCTGCCTTaGAAACTAAAAAGACTTGTT +
Preference number: 5 (lower is better)
Translates to: GYQLCCTLRSLTGLISLCSLPLP*KLKRLV
Trigger: AACAAGTCTTTTTAGTTTCAAAGGCAGAGGAAGAGA...GCAAAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCAATCTGGAGGTTGTTaGCATCAGGGTCTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEQSGGC*HQGLLQ
Trigger: TTGAAGAAGACCCTGATGCAAACAACCTCCAGATTG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGACTGCAATCTGGAGGTaGTTTGCATCAGGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTATAIWR*FASGSS
Trigger: AGAAGACCCTGATGCAAACAACCTCCAGATTGCAGT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATGCACTCTGAGGAGCTaGACCGGTTTAATCTCACTT +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISCTLRS*TGLISL
Trigger: AAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTGCACTCTGAGGAGCTaGACCGGTTTAATCTCACTT +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTACTLRS*TGLISL
Trigger: AAGTGAGATTAAACCGGTCAAGCTCCTCAGAGTGCA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGATTTGGAACTTGACTaGCAGGAAACCGTGACCCAT +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTADLELD*QETVTH
Trigger: ATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGATTTGGAACTTGACTaGCAGGAAACCGTGACCCAT +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISDLELD*QETVTH
Trigger: ATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGCTATGATCATGCCATaGCACTCTAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEAMIMP*HSSLGD
Trigger: GTCACCCAGGCTAGAGTGCAATGGCATGATCATAGC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp ACTGCCATCAGACTCCAGCAATGTGGTTCCAATGTCATCAACGCATCTATCAATCATGGCAGTGTTATATaGAAGAAACACTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: TAIRLQQCGSNVINASINHGSVI*KKHCHQ
Trigger: CTGATGGCAGTGTTTCTTCAATATAACACTGCCATG...ATTGATAGATGCGTTGATGACATTGGAACCACATTGCTGGAGTCTGATGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACTGGGGGAGGCAACATaGCCATCTTTTCATCCTGTA +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDELGEAT*PSFHPV
Trigger: TACAGGATGAAAAGATGGCAATGTTGCCTCCCCCAG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTCTTTCAGCAATGCGTaGTTCAATGAGGGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTASFSNA*FNEGKR
Trigger: TCTCTTGCCCTCATTGAACAACGCATTGCTGAAAGA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAGTCACTGCTTGGCTTaGGGGCTTCTTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSHCLA*GLLHHH
Trigger: ATGATGATGAAGAAGCCCCAAAGCCAAGCAGTGACT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAAAGCAGGTGTGGCATaGAAACGGAAGATTGTTTTC +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEKAGVA*KRKIVF
Trigger: GAAAACAATCTTCCGTTTCAATGCCACACCTGCTTT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAGTGTACTCGACATTTTaGGTCCAGTCCGGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEVYSTF*VQSGGL
Trigger: TAACCCACCGGACTGGACCAAAAATGTCGAGTACAC...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CCTTTCCCTGACTCTATGTTAACTTGGCAGCATGAGAACCTCCATACACAACCTATAGCAAGTACATTTTaGAATTCCTCAGTCATTGGG +
Preference number: 5 (lower is better)
Translates to: PFPDSMLTWQHENLHTQPIASTF*NSSVIG
Trigger: CCCAATGACTGAGGAATTCAAAAATGTACTTGCTAT...AGGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACAATCTGGAGGTTGTTaGCATCAGGGTCTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISQSGGC*HQGLLQ
Trigger: TTGAAGAAGACCCTGATGCAAACAACCTCCAGATTG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGATTTGGAACTTGACTaGCAGGAAACCGTGACCCAT +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKDLELD*QETVTH
Trigger: ATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAACATTCGGAACGATTaGGAACTTGACTTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSENIRND*ELDLQE
Trigger: TTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGTT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGTCAAATATACATCCTaGGATTTTGTTCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFVKYTS*DFVPWS
Trigger: CGACCAGGGAACAAAATCCAAGGATGTATATTTGAC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTGGCAAGAGAGCAAGTaGGCAAGAATCCCTATTTCA +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTAWQESK*ARIPIS
Trigger: TGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCCA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS TCA 90 bp ACTCATTGCTCTCTGTCTGAGGTTGGGATCATTCAGCATATCCTCTaGAAGGAGATAGGAACTACAACGCCTTTTCTTGTGTATTTGATT +
Preference number: 5 (lower is better)
Translates to: THCSLSEVGIIQHIL*KEIGTTTPFLVYLI
Trigger: AATCAAATACACAAGAAAAGGCGTTGTAGTTCCTATCTCCTTTCAGAGGATATGCTGAATGATCCCAACCTCAGACAGAGAGCAATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000454569.6
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
ENST00000667201.2
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCTTTCAGCAATGCGTaGTTCAATGAGGGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSFSNA*FNEGKR
Trigger: TCTCTTGCCCTCATTGAACAACGCATTGCTGAAAGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCTTCTTTGGGTTCCTTaGATTTTCTTTCAGCAATGC +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFLLWVP*IFFQQC
Trigger: GCATTGCTGAAAGAAAATCAAAGGAACCCAAAGAAG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAGTCACTGCTTGGCTTaGGGGCTTCTTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESHCLA*GLLHHH
Trigger: ATGATGATGAAGAAGCCCCAAAGCCAAGCAGTGACT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCAAAGCCCCTACAATaGTCTTCAGGCCTGGGATTA +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESKPLQ*SSGLGL
Trigger: TAATCCCAGGCCTGAAGACAATTGTAGGGGCTTTGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCTTTTAGAGCTCAGTTaGGATGTTTCAGAAGAACTC +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFLLELS*DVSEEL
Trigger: GAGTTCTTCTGAAACATCCAAACTGAGCTCTAAAAG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACCTTTTCTTGTGTATTaGATTGGTCGTGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEPFLVY*IGRAAV
Trigger: GACAGCGGCACGACCAATCAAATACACAAGAAAAGG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303354.11
ENST00000642356.2
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTTCCAGATCAAGAATTaGTGTGCAAATCTGTACCAC +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFFQIKN*CANLYH
Trigger: GTGGTACAGATTTGCACACAAATTCTTGATCTGGAA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTTCCAGATCAAGAATTaGTGTGCAAATCTGTACCAC +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEFQIKN*CANLYH
Trigger: GTGGTACAGATTTGCACACAAATTCTTGATCTGGAA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACAATCTGGAGGTTGTTaGCATCAGGGTCTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKQSGGC*HQGLLQ
Trigger: TTGAAGAAGACCCTGATGCAAACAACCTCCAGATTG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCGGTTTAATCTCACTTaGCTGTATTCACTATCCGAA +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFRFNLT*LYSLSE
Trigger: TTCGGATAGTGAATACAGCAAAGTGAGATTAAACCG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAACATTCGGAACGATTaGGAACTTGACTTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISNIRND*ELDLQE
Trigger: TTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGTT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTTTCCATCGCACATTTaGACTAACATTCATAAGGGC +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFFPSHI*TNIHKG
Trigger: GCCCTTATGAATGTTAGTCAAAATGTGCGATGGAAA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTCATATTTGGGCTGCTaGTCTACATTAACAGAATCC +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSYLGC*STLTES
Trigger: GGATTCTGTTAATGTAGACAAGCAGCCCAAATATGA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTCATATTTGGGCTGCTaGTCTACATTAACAGAATCC +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESYLGC*STLTES
Trigger: GGATTCTGTTAATGTAGACAAGCAGCCCAAATATGA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGTCAAATATACATCCTaGGATTTTGTTCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTAVKYTS*DFVPWS
Trigger: CGACCAGGGAACAAAATCCAAGGATGTATATTTGAC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAGTCATATGTTGACTTaGACCCTCCTTTTCTACCAT +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSHMLT*TLLFYH
Trigger: ATGGTAGAAAAGGAGGGTCAAAGTCAACATATGACT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAGTCATATGTTGACTTaGACCCTCCTTTTCTACCAT +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESHMLT*TLLFYH
Trigger: ATGGTAGAAAAGGAGGGTCAAAGTCAACATATGACT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTCTATCAAGCATTTCATaGCAAAGCCAAGGCAAATAC +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFLSSIS*QSQGKY
Trigger: GTATTTGCCTTGGCTTTGCAATGAAATGCTTGATAG...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGCTATCAAGCATTTCATaGCAAAGCCAAGGCAAATAC +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSELSSIS*QSQGKY
Trigger: GTATTTGCCTTGGCTTTGCAATGAAATGCTTGATAG...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTTGCCAAACACGGGATaGTATACAAGTGATGCAATA +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFLPNTG*YTSDAI
Trigger: TATTGCATCACTTGTATACAATCCCGTGTTTGGCAA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGTCATATTACATGATTaGAAAGCTTGCCAAACACGG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFVILHD*KACQTR
Trigger: CCGTGTTTGGCAAGCTTTCAAATCATGTAATATGAC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATGGCAAGAGAGCAAGTaGGCAAGAATCCCTATTTCA +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKWQESK*ARIPIS
Trigger: TGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCCA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTGCCCATGGTACTGTGTaGATTGAGGCAAAATATATT +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFAHGTV*IEAKYI
Trigger: AATATATTTTGCCTCAATCAACACAGTACCATGGGC...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATGCCTTTCTGTATTGTaGGGTGTAATAAGTTCAGCG +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISCLSVL*GVISSA
Trigger: CGCTGAACTTATTACACCCAACAATACAGAAAGGCA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTTTCATCCGAAAGATTaGTGTTCAAACCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFFHPKD*CSNLFG
Trigger: CCCAAACAGGTTTGAACACAAATCTTTCGGATGAAA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACCTTTTCTTGTGTATTaGATTGGTCGTGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEPFLVY*IGRALW
Trigger: CCAGAGGGCACGACCAATCAAATACACAAGAAAAGG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCTTTCAGCAATGCGTaGTTCAATGAGGGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESFSNA*FNEGKR
Trigger: TCTCTTGCCCTCATTGAACAACGCATTGCTGAAAGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCTTCTTTGGGTTCCTTaGATTTTCTTTCAGCAATGC +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTALLWVP*IFFQQC
Trigger: GCATTGCTGAAAGAAAATCAAAGGAACCCAAAGAAG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAAAGCAGGTGTGGCATaGAAACGGAAGATTGTTTTC +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKKAGVA*KRKIVF
Trigger: GAAAACAATCTTCCGTTTCAATGCCACACCTGCTTT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACTTTTAGAGCTCAGTTaGGATGTTTCAGAAGAACTC +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISLLELS*DVSEEL
Trigger: GAGTTCTTCTGAAACATCCAAACTGAGCTCTAAAAG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCTTTTAGAGCTCAGTTaGGATGTTTCAGAAGAACTC +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTALLELS*DVSEEL
Trigger: GAGTTCTTCTGAAACATCCAAACTGAGCTCTAAAAG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGTCTCTTCCTCTGCCTTaGAAACTAAAAAGACTTGTT +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSESLPLP*KLKRLV
Trigger: AACAAGTCTTTTTAGTTTCAAAGGCAGAGGAAGAGA...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTTCTCTTCCTCTGCCTTaGAAACTAAAAAGACTTGTT +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFSLPLP*KLKRLV
Trigger: AACAAGTCTTTTTAGTTTCAAAGGCAGAGGAAGAGA...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCATTCCAGATCAAGAATTaGTGTGCAAATCTGTACCAC +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISFQIKN*CANLYH
Trigger: GTGGTACAGATTTGCACACAAATTCTTGATCTGGAA...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp TTAACTTGGCAGCATGAGAACCTCCATACACAACCTGGCTTATTTCTTGAGAAATTCCAGATCAAGAATTaGTGTGCAAATCTGTACCAC +
Preference number: 5 (lower is better)
Translates to: LTWQHENLHTQPGLFLEKFQIKN*CANLYH
Trigger: GTGGTACAGATTTGCACACAAATTCTTGATCTGGAA...TTTCTCAAGAAATAAGCCAGGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667201.2
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGATAGCAAGTACATTTTaGAATTCCTCAGTCATTGGG +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSEIASTF*NSSVIG
Trigger: CCCAATGACTGAGGAATTCAAAAATGTACTTGCTAT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTATAGCAAGTACATTTTaGAATTCCTCAGTCATTGGG +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFIASTF*NSSVIG
Trigger: CCCAATGACTGAGGAATTCAAAAATGTACTTGCTAT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACAATCTGGAGGTTGTTaGCATCAGGGTCTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEQSGGC*HQGLLQ
Trigger: TTGAAGAAGACCCTGATGCAAACAACCTCCAGATTG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGCGGTTTAATCTCACTTaGCTGTATTCACTATCCGAA +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTARFNLT*LYSLSE
Trigger: TTCGGATAGTGAATACAGCAAAGTGAGATTAAACCG...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCACGGTTTAATCTCACTTaGCTGTATTCACTATCCGAA +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISRFNLT*LYSLSE
Trigger: TTCGGATAGTGAATACAGCAAAGTGAGATTAAACCG...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAACATTCGGAACGATTaGGAACTTGACTTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKNIRND*ELDLQE
Trigger: TTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGTT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAGGCTATATTCATATTaGGGCTGCTTGTCTACATTA +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFRLYSY*GCLSTL
Trigger: TAATGTAGACAAGCAGCCCAAATATGAATATAGCCT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGAGGCTATATTCATATTaGGGCTGCTTGTCTACATTA +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSERLYSY*GCLSTL
Trigger: TAATGTAGACAAGCAGCCCAAATATGAATATAGCCT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTCAAATATACATCCTaGGATTTTGTTCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVKYTS*DFVPWS
Trigger: CGACCAGGGAACAAAATCCAAGGATGTATATTTGAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAGTCATATGTTGACTTaGACCCTCCTTTTCTACCAT +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISSHMLT*TLLFYH
Trigger: ATGGTAGAAAAGGAGGGTCAAAGTCAACATATGACT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAACTTCAGTCATATGTaGACTTTGACCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTANFSHM*TLTLLF
Trigger: GAAAAGGAGGGTCAAAGTCAACATATGACTGAAGTT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAACTTCAGTCATATGTaGACTTTGACCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISNFSHM*TLTLLF
Trigger: GAAAAGGAGGGTCAAAGTCAACATATGACTGAAGTT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAATAACCTCTGTACATaGATAAAAAGTCAAGCTCCC +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFNNLCT*IKSQAP
Trigger: GGGAGCTTGACTTTTTATCAATGTACAGAGGTTATT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp CAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCAGAGACTATTATCAGTATTTaGGGCAGCACAGTCAAATGT +
Preference number: 5 (lower is better)
Translates to: QCKNNHLLMLPTFLRKSETIISI*GSTVKC
Trigger: ACATTTGACTGTGCTGCCCAAAATACTGATAATAGT...CTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGTTGCCAAACACGGGATaGTATACAAGTGATGCAATA +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTALPNTG*YTSDAI
Trigger: TATTGCATCACTTGTATACAATCCCGTGTTTGGCAA...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGTCATATTACATGATTaGAAAGCTTGCCAAACACGG +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTAVILHD*KACQTR
Trigger: CCGTGTTTGGCAAGCTTTCAAATCATGTAATATGAC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATGGCAAGAGAGCAAGTaGGCAAGAATCCCTATTTCA +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEWQESK*ARIPIS
Trigger: TGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCCA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAGCCCATGGTACTGTGTaGATTGAGGCAAAATATATT +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISAHGTV*IEAKYI
Trigger: AATATATTTTGCCTCAATCAACACAGTACCATGGGC...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGGCCCATGGTACTGTGTaGATTGAGGCAAAATATATT +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTAAHGTV*IEAKYI
Trigger: AATATATTTTGCCTCAATCAACACAGTACCATGGGC...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATGCCTTTCTGTATTGTaGGGTGTAATAAGTTCAGCG +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKCLSVL*GVISSA
Trigger: CGCTGAACTTATTACACCCAACAATACAGAAAGGCA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp CCCACCTTTCTTAGGAAATCAGAGTTAGTGACTGCACTGCCTTCGAGAATATTTAACTGCCTTTCTGTATaGTTGGGTGTAATAAGTTCA +
Preference number: 5 (lower is better)
Translates to: PTFLRKSELVTALPSRIFNCLSV*LGVISS
Trigger: TGAACTTATTACACCCAACAATACAGAAAGGCAGTT...AAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAAAGCAGGTGTGGCATaGAAACGGAAGATTGTTTTC +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEKAGVA*KRKIVF
Trigger: GAAAACAATCTTCCGTTTCAATGCCACACCTGCTTT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATTCCAGATCAAGAATTaGTGTGCAAATCTGTACCAC +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKFQIKN*CANLYH
Trigger: GTGGTACAGATTTGCACACAAATTCTTGATCTGGAA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAATAGCAAGTACATTTTaGAATTCCTCAGTCATTGGG +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISIASTF*NSSVIG
Trigger: CCCAATGACTGAGGAATTCAAAAATGTACTTGCTAT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAACGGTTTAATCTCACTTaGCTGTATTCACTATCCGAA +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKRFNLT*LYSLSE
Trigger: TTCGGATAGTGAATACAGCAAAGTGAGATTAAACCG...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAACATTCGGAACGATTaGGAACTTGACTTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDENIRND*ELDLQE
Trigger: TTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGTT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCATATTTGGGCTGCTaGTCTACATTAACAGAATCC +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSYLGC*STLTES
Trigger: GGATTCTGTTAATGTAGACAAGCAGCCCAAATATGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGTACCGTGGTCAAACAACTAACTGCATATCAGGAAGGATTTCAAGGCTATATTCATATTaGGGCTGCTTGTCTACATTA +
Preference number: 5 (lower is better)
Translates to: CSSMYRGQTTNCISGRISRLYSY*GCLSTL
Trigger: TAATGTAGACAAGCAGCCCAAATATGAATATAGCCT...TGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAACTTCAGTCATATGTaGACTTTGACCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKNFSHM*TLTLLF
Trigger: GAAAAGGAGGGTCAAAGTCAACATATGACTGAAGTT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGAATAACCTCTGTACATaGATAAAAAGTCAAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTANNLCT*IKSQAP
Trigger: GGGAGCTTGACTTTTTATCAATGTACAGAGGTTATT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp GGTCAAACAACTAACTGCATATCAGGAAGGATTTCATCAACTTTGCTTACAGCGACTATTATCAGTATTTaGGGCAGCACAGTCAAATGT +
Preference number: 5 (lower is better)
Translates to: GQTTNCISGRISSTLLTATIISI*GSTVKC
Trigger: ACATTTGACTGTGCTGCCCAAAATACTGATAATAGT...CGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAGTCATATTACATGATTaGAAAGCTTGCCAAACACGG +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKVILHD*KACQTR
Trigger: CCGTGTTTGGCAAGCTTTCAAATCATGTAATATGAC...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATGCCTTTCTGTATTGTaGGGTGTAATAAGTTCAGCG +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDECLSVL*GVISSA
Trigger: CGCTGAACTTATTACACCCAACAATACAGAAAGGCA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATTTCATCCGAAAGATTaGTGTTCAAACCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKFHPKD*CSNLFG
Trigger: CCCAAACAGGTTTGAACACAAATCTTTCGGATGAAA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACTTCTTTGGGTTCCTTaGATTTTCTTTCAGCAATGC +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDELLWVP*IFFQQC
Trigger: GCATTGCTGAAAGAAAATCAAAGGAACCCAAAGAAG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAACTTTTAGAGCTCAGTTaGGATGTTTCAGAAGAACTC +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDELLELS*DVSEEL
Trigger: GAGTTCTTCTGAAACATCCAAACTGAGCTCTAAAAG...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAATCTCTTCCTCTGCCTTaGAAACTAAAAAGACTTGTT +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKSLPLP*KLKRLV
Trigger: AACAAGTCTTTTTAGTTTCAAAGGCAGAGGAAGAGA...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAATAGCAAGTACATTTTaGAATTCCTCAGTCATTGGG +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKIASTF*NSSVIG
Trigger: CCCAATGACTGAGGAATTCAAAAATGTACTTGCTAT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATTTCCATCGCACATTTaGACTAACATTCATAAGGGC +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEFPSHI*TNIHKG
Trigger: GCCCTTATGAATGTTAGTCAAAATGTGCGATGGAAA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAGGCTATATTCATATTaGGGCTGCTTGTCTACATTA +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKRLYSY*GCLSTL
Trigger: TAATGTAGACAAGCAGCCCAAATATGAATATAGCCT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAAGTCATATGTTGACTTaGACCCTCCTTTTCTACCAT +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESHMLT*TLLFYH
Trigger: ATGGTAGAAAAGGAGGGTCAAAGTCAACATATGACT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAATAACCTCTGTACATaGATAAAAAGTCAAGCTCCC +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKNNLCT*IKSQAP
Trigger: GGGAGCTTGACTTTTTATCAATGTACAGAGGTTATT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATTGCCAAACACGGGATaGTATACAAGTGATGCAATA +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDELPNTG*YTSDAI
Trigger: TATTGCATCACTTGTATACAATCCCGTGTTTGGCAA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp AATCATCAGTGCAAAAATAACCATCTGCTAATGCTGCCCACCTTTCTTAGGAAAAACTGCCTTTCTGTATaGTTGGGTGTAATAAGTTCA +
Preference number: 5 (lower is better)
Translates to: NHQCKNNHLLMLPTFLRKNCLSV*LGVISS
Trigger: TGAACTTATTACACCCAACAATACAGAAAGGCAGTT...TTTCCTAAGAAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATTTCATCCGAAAGATTaGTGTTCAAACCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEFHPKD*CSNLFG
Trigger: CCCAAACAGGTTTGAACACAAATCTTTCGGATGAAA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAATCTCTTCCTCTGCCTTaGAAACTAAAAAGACTTGTT +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDESLPLP*KLKRLV
Trigger: AACAAGTCTTTTTAGTTTCAAAGGCAGAGGAAGAGA...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAATAGCAAGTACATTTTaGAATTCCTCAGTCATTGGG +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDEIASTF*NSSVIG
Trigger: CCCAATGACTGAGGAATTCAAAAATGTACTTGCTAT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS-3UTR CAA 90 bp ACACAATACTCTAAAGGTAAGTCTTATCCTTGTTGGCATGTGAGTCAAGATGAAACTATTATCAGTATTTaGGGCAGCACAGTCAAATGT +
Preference number: 5 (lower is better)
Translates to: TQYSKGKSYPCWHVSQDETIISI*GSTVKC
Trigger: ACATTTGACTGTGCTGCCCAAAATACTGATAATAGT...TTCATCTTGACTCACATGCCAACAAGGATAAGACTTACCTTTAGAGTATTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303354.11
ENST00000409672.5
ENST00000642356.2
ENST00000645907.1
CDS GCA 72 bp CGCTGGCGACCGCCTGCAAGCAGACTGCGCCCCTCCTaGCAGGGCGCGCCCGTGGAGGTAGCAGCCCCGCCT +
Preference number: 6 (lower is better)
Translates to: RWRPPASRLRPS*QGAPVEVAAPP
Trigger: AGGCGGGGCTGCTACCTCCACGGGCGCGCCCTGGCAGGAGGGGCGCAGTCTGCTTGCAGGCGGTCGCCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409672.5
ENST00000472119.2
CDS GCA 72 bp AAGCCGACAGCCGCCGCTGGAGCGCTGGCGACCGCCTaGAAGCAGACTGCGCCCCTCCTGCCAGGGCGCGCC +
Preference number: 6 (lower is better)
Translates to: KPTAAAGALATA*KQTAPLLPGRA
Trigger: GGCGCGCCCTGGCAGGAGGGGCGCAGTCTGCTTGCAGGCGGTCGCCAGCGCTCCAGCGGCGGCTGTCGGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000454569.6
ENST00000472119.2
CDS CAA 90 bp GCCACTGGCACCCAGGCTAGCCCAGCCTCAGCCGAGCTGGCGGAATaGGAAAGCCGACAGCCGCCGCTGGAGCGCTGGCGACCGCCTGCA +
Preference number: 6 (lower is better)
Translates to: ATGTQASPASAELAE*ESRQPPLERWRPPA
Trigger: TGCAGGCGGTCGCCAGCGCTCCAGCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGGCTGAGGCTGGGCTAGCCTGGGTGCCAGTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409672.5
ENST00000452182.2
ENST00000454569.6
ENST00000472119.2
ENST00000642356.2
CDS CCA 72 bp GCGGAATTGGAAAGCCGACAGCCGCCGCTGGAGCGCTaGCGACCGCCTGCAAGCAGACTGCGCCCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: AELESRQPPLER*RPPASRLRPSC
Trigger: GCAGGAGGGGCGCAGTCTGCTTGCAGGCGGTCGCCAGCGCTCCAGCGGCGGCTGTCGGCTTTCCAATTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000454569.6
ENST00000472119.2
CDS CCA 72 bp CCGAGCTGGCGGAATTGGAAAGCCGACAGCCGCCGCTaGAGCGCTGGCGACCGCCTGCAAGCAGACTGCGCC +
Preference number: 6 (lower is better)
Translates to: PSWRNWKADSRR*SAGDRLQADCA
Trigger: GGCGCAGTCTGCTTGCAGGCGGTCGCCAGCGCTCCAGCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409672.5
ENST00000454569.6
ENST00000472119.2
CDS CCA 72 bp CCCAGGCTAGCCCAGCCTCAGCCGAGCTGGCGGAATTaGAAAGCCGACAGCCGCCGCTGGAGCGCTGGCGAC +
Preference number: 6 (lower is better)
Translates to: PRLAQPQPSWRN*KADSRRWSAGD
Trigger: GTCGCCAGCGCTCCAGCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGGCTGAGGCTGGGCTAGCCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409672.5
ENST00000452182.2
ENST00000454569.6
ENST00000472119.2
ENST00000642356.2
CDS CCA 72 bp CCACTGGCACCCAGGCTAGCCCAGCCTCAGCCGAGCTaGCGGAATTGGAAAGCCGACAGCCGCCGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PLAPRLAQPQPS*RNWKADSRRWS
Trigger: GCTCCAGCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGGCTGAGGCTGGGCTAGCCTGGGTGCCAGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409672.5
ENST00000452182.2
ENST00000454569.6
ENST00000472119.2
ENST00000642356.2
CDS CAA 72 bp ACCCAGGCTAGCCCAGCCTCAGCCGAGCTGGCGGAATaGGAAAGCCGACAGCCGCCGCTGGAGCGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: TQASPASAELAE*ESRQPPLERWR
Trigger: TCGCCAGCGCTCCAGCGGCGGCTGTCGGCTTTCCAATTCCGCCAGCTCGGCTGAGGCTGGGCTAGCCTGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409672.5
ENST00000452182.2
ENST00000454569.6
ENST00000472119.2
ENST00000642356.2
CDS GCA 72 bp AGGCCTAGCCCGCCGATCATCCCCACCCAGTGCACCTaGAGAATCTGGCTCCAGGAGAGGGCGCGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: RPSPPIIPTQCT*RIWLQERARAS
Trigger: AGAGGCCCGCGCCCTCTCCTGGAGCCAGATTCTGCAGGTGCACTGGGTGGGGATGATCGGCGGGCTAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303354.11
ENST00000645907.1
CDS GCA 72 bp CAACCTAGCCCGCCGATCATCCCCACCCAGTGCACCTaGAGAATCTGGCTCCAGGAGAGGGCGCGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: QPSPPIIPTQCT*RIWLQERARAS
Trigger: AGAGGCCCGCGCCCTCTCCTGGAGCCAGATTCTGCAGGTGCACTGGGTGGGGATGATCGGCGGGCTAGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409672.5
ENST00000454569.6
ENST00000472119.2
ENST00000642356.2
CDS GCA 72 bp GGCTTGCAACCTAGCCCGCCGATCATCCCCACCCAGTaGACCTGCAGAATCTGGCTCCAGGAGAGGGCGCGG +
Preference number: 6 (lower is better)
Translates to: GLQPSPPIIPTQ*TCRIWLQERAR
Trigger: CCGCGCCCTCTCCTGGAGCCAGATTCTGCAGGTGCACTGGGTGGGGATGATCGGCGGGCTAGGTTGCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409672.5
ENST00000454569.6
ENST00000472119.2
ENST00000642356.2
CDS GCA 72 bp CATAAGAGGCCTAGCCCGCCGATCATCCCCACCCAGTaGACCTGCAGAATCTGGCTCCAGGAGAGGGCGCGG +
Preference number: 6 (lower is better)
Translates to: HKRPSPPIIPTQ*TCRIWLQERAR
Trigger: CCGCGCCCTCTCCTGGAGCCAGATTCTGCAGGTGCACTGGGTGGGGATGATCGGCGGGCTAGGCCTCTTATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303354.11
ENST00000645907.1
CDS TCA 72 bp TCACCGGCAGCATTGGTGGGGACCTACTGGCTTGGCTaGTGTTACTGCTGCGTCGCTCCTGGGGTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: SPAALVGTYWLG*CYCCVAPGVCG
Trigger: CCCACAGACCCCAGGAGCGACGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCCACCAATGCTGCCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000454569.6
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
ENST00000667201.2
CDS CCA 72 bp CCGTTCACCGGCAGCATTGGTGGGGACCTACTGGCTTaGCTGATGTTACTGCTGCGTCGCTCCTGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: PFTGSIGGDLLA*LMLLLRRSWGL
Trigger: CAGACCCCAGGAGCGACGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000454569.6
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
ENST00000667201.2
CDS CAA 72 bp CCCGTTCACCGGCAGCATTGGTGGGGACCTACTGGCTaGGCTGATGTTACTGCTGCGTCGCTCCTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: PVHRQHWWGPTG*ADVTAASLLGS
Trigger: AGACCCCAGGAGCGACGCAGCAGTAACATCAGCCAAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000454569.6
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
ENST00000667201.2
CDS TCA 72 bp GTGAGCCATGATCACACCACTGCGGTCCAGCTTGGATaGCAGACAGAGACCCTGCAGAATCTGGCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: VSHDHTTAVQLG*QTETLQNLAPG
Trigger: TCCTGGAGCCAGATTCTGCAGGGTCTCTGTCTGTCATCCAAGCTGGACCGCAGTGGTGTGATCATGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452182.2
CDS CCA 72 bp CACAGCACTGTGCATTTTCCCGTTCACCGGCAGCATTaGTGGGGACCTACTGGCTTGGCTGATGTTACTGCT +
Preference number: 6 (lower is better)
Translates to: HSTVHFPVHRQH*WGPTGLADVTA
Trigger: AGCAGTAACATCAGCCAAGCCAGTAGGTCCCCACCAATGCTGCCGGTGAACGGGAAAATGCACAGTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000454569.6
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
ENST00000667201.2
CDS TCA 72 bp ATCACAGCAGCTGAGCTTCAGCCAACCACAGCCTGCTaGTTTATCAGACAATGTCCACATAAGGCAAATGTC +
Preference number: 6 (lower is better)
Translates to: ITAAELQPTTAC*FIRQCPHKANV
Trigger: GACATTTGCCTTATGTGGACATTGTCTGATAAATCAGCAGGCTGTGGTTGGCTGAAGCTCAGCTGCTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645815.1
CDS CAA 72 bp AAGGAGATAGGAACTACAACGCCTTTTCTTGTGTATTaGATTGGTCGTGCCCTCTGGCAGAAGCTGTCCATT +
Preference number: 6 (lower is better)
Translates to: KEIGTTTPFLVY*IGRALWQKLSI
Trigger: AATGGACAGCTTCTGCCAGAGGGCACGACCAATCAAATACACAAGAAAAGGCGTTGTAGTTCCTATCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409672.5
ENST00000454569.6
ENST00000644316.1
ENST00000645907.1
ENST00000667201.2
CDS TCA 72 bp TCTCTGTCTGAGGTTGGGATCATTCAGCATATCCTCTaGAAGGAGATAGGAACTACAACGCCTTTTCTTGTG +
Preference number: 6 (lower is better)
Translates to: SLSEVGIIQHIL*KEIGTTTPFLV
Trigger: CACAAGAAAAGGCGTTGTAGTTCCTATCTCCTTTCAGAGGATATGCTGAATGATCCCAACCTCAGACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000454569.6
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
ENST00000667201.2
CDS TCA 72 bp TTCATAAGGGCAAAACATTCGGAACGATTTGGAACTTaGCTTGCAGGAAACCGTGACCCATCTGTGGTGTTA +
Preference number: 6 (lower is better)
Translates to: FIRAKHSERFGT*LAGNRDPSVVL
Trigger: TAACACCACAGATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGTTTTGCCCTTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS CCA 72 bp CACCAGATTTTTCCTTTCCCTGACTCTATGTTAACTTaGCAGCATGAGAACCTCCATACACAACCATCTGTG +
Preference number: 6 (lower is better)
Translates to: HQIFPFPDSMLT*QHENLHTQPSV
Trigger: CACAGATGGTTGTGTATGGAGGTTCTCATGCTGCCAAGTTAACATAGAGTCAGGGAAAGGAAAAATCTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS CAA 72 bp AAGGAGATAGGAACTACAACGCCTTTTCTTGTGTATTaGATTGGTCGTGCCGCTGTCATCAGAAGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: KEIGTTTPFLVY*IGRAAVIRSCL
Trigger: AAGGCAACTTCTGATGACAGCGGCACGACCAATCAAATACACAAGAAAAGGCGTTGTAGTTCCTATCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000642356.2
CDS TCA 72 bp TTCGGAACGATTTGGAACTTGACTTGCAGGAAACCGTaGCCCATCTGTGGTGTTAATACACTCATAGAACTT +
Preference number: 6 (lower is better)
Translates to: FGTIWNLTCRKP*PICGVNTLIEL
Trigger: AAGTTCTATGAGTGTATTAACACCACAGATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
CDS TCA 72 bp CCTTTTTCTGTCTATAAATACTCCTGCTCATGTTGCTaGGTTGAGCTCTCCGAACTTCTCTTGGTTCTGAGT +
Preference number: 6 (lower is better)
Translates to: PFSVYKYSCSCC*VELSELLLVLS
Trigger: ACTCAGAACCAAGAGAAGTTCGGAGAGCTCAACTCAGCAACATGAGCAGGAGTATTTATAGACAGAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645815.1
CDS CAA 72 bp GGTTCCAATGTCATCAACGCATCTATCAATGTCACCTaGGCCAATGAACTCCAAGTCCACTTCTTCATAGTA +
Preference number: 6 (lower is better)
Translates to: GSNVINASINVT*ANELQVHFFIV
Trigger: TACTATGAAGAAGTGGACTTGGAGTTCATTGGCCAAGGTGACATTGATAGATGCGTTGATGACATTGGAACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS CAA 90 bp CAGCAATGTGGTTCCAATGTCATCAACGCATCTATCAATGTCACCTaGGCCAATGAACTCCAAGTCCACTTCTTCATAGTAACTTTTTGT +
Preference number: 6 (lower is better)
Translates to: QQCGSNVINASINVT*ANELQVHFFIVTFC
Trigger: ACAAAAAGTTACTATGAAGAAGTGGACTTGGAGTTCATTGGCCAAGGTGACATTGATAGATGCGTTGATGACATTGGAACCACATTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS TCA 72 bp TGTCATCAACGCATCTATCAATGTCACCTTGGCCAATaGACTCCAAGTCCACTTCTTCATAGTAACTTTTTG +
Preference number: 6 (lower is better)
Translates to: CHQRIYQCHLGQ*TPSPLLHSNFL
Trigger: CAAAAAGTTACTATGAAGAAGTGGACTTGGAGTTCATTGGCCAAGGTGACATTGATAGATGCGTTGATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667991.1
CDS CAA 72 bp CCAGTAAAGACCAAATTTCCTATAGCAAGTACATTTTaGAATTCCTCAGTCATTGGGTGGTGTTCCATAGCC +
Preference number: 6 (lower is better)
Translates to: PVKTKFPIASTF*NSSVIGWCSIA
Trigger: GGCTATGGAACACCACCCAATGACTGAGGAATTCAAAAATGTACTTGCTATAGGAAATTTGGTCTTTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303354.11
ENST00000409435.6
ENST00000409672.5
ENST00000454569.6
ENST00000642356.2
ENST00000644316.1
ENST00000645907.1
ENST00000667201.2
CDS TCA 72 bp AGATACATTCCAGGTGTCAGACAGAAAGTACAATCTTaGTCATATCTTCATCCAATATTCATCAACCGTTCC +
Preference number: 6 (lower is better)
Translates to: RYIPGVRQKVQS*SYLHPIFINRS
Trigger: GGAACGGTTGATGAATATTGGATGAAGATATGATCAAGATTGTACTTTCTGTCTGACACCTGGAATGTATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472119.2
ENST00000645815.1