RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCN8A (Homo sapiens)

Ensembl gene IDs: ENSG00000196876

Ensembl transcript IDs: ENST00000354534.11, ENST00000355133.7, ENST00000545061.5, ENST00000546961.1, ENST00000548086.3, ENST00000550891.4, ENST00000551216.2, ENST00000599343.5, ENST00000627620.5, ENST00000636945.2, ENST00000637709.2, ENST00000638820.1, ENST00000662684.1, ENST00000667214.1, ENST00000668547.1

Found 2104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCGTCTGTGGGCCTGTCTGGGGCGATGGAGGGCAGGGCCCAGTATaGGCTTGCAGAGTGGAGGCTGTTGGGCATCGCACATGCCCTAGC +
Preference number: 1 (lower is better)
Translates to: LVCGPVWGDGGQGPV*ACRVEAVGHRTCPS
Trigger: GCTAGGGCATGTGCGATGCCCAACAGCCTCCACTCTGCAAGCTCATACTGGGCCCTGCCCTCCATCGCCCCAGACAGGCCCACAGACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 90 bp CCCAATGCTGCTACCCTCACCCACCTCTGTGGGCAAGGGAAGCCCTaGTCAGTGGAGAAATGTGATGGAGGCAGGGGGAGCCATGCAGTG +
Preference number: 1 (lower is better)
Translates to: PNAATLTHLCGQGKP*SVEKCDGGRGSHAV
Trigger: CACTGCATGGCTCCCCCTGCCTCCATCACATTTCTCCACTGAGCAGGGCTTCCCTTGCCCACAGAGGTGGGTGAGGGTAGCAGCATTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 90 bp CTGCTACCCTCACCCACCTCTGTGGGCAAGGGAAGCCCTGCTCAGTaGAGAAATGTGATGGAGGCAGGGGGAGCCATGCAGTGTGTGAGT +
Preference number: 1 (lower is better)
Translates to: LLPSPTSVGKGSPAQ*RNVMEAGGAMQCVS
Trigger: ACTCACACACTGCATGGCTCCCCCTGCCTCCATCACATTTCTCCACTGAGCAGGGCTTCCCTTGCCCACAGAGGTGGGTGAGGGTAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 90 bp CATTACAGAAGATGCCCAGGACTCAAGTCACAAAGTCATGACCCATaGCGATCTCACCTCCACAGCAGGCCTGGAGGCTGGGGGCCGAGG +
Preference number: 1 (lower is better)
Translates to: HYRRCPGLKSQSHDP*RSHLHSRPGGWGPR
Trigger: CCTCGGCCCCCAGCCTCCAGGCCTGCTGTGGAGGTGAGATCGCCATGGGTCATGACTTTGTGACTTGAGTCCTGGGCATCTTCTGTAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 90 bp GCACTTCGAGATCCTCCTGAGAGAGTGTTCCTGAACCAGGAGACATaGCCTAGGCCTAGAGAGGGATGTCCCCAAAGGGGGACAGGGAGA +
Preference number: 1 (lower is better)
Translates to: ALRDPPERVFLNQET*PRPREGCPQRGTGR
Trigger: TCTCCCTGTCCCCCTTTGGGGACATCCCTCTCTAGGCCTAGGCCATGTCTCCTGGTTCAGGAACACTCTCTCAGGAGGATCTCGAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 90 bp ACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTaGGCACTTCGAGATCCTCCTGAGAGAGTGTTCCTGAACCAGGAG +
Preference number: 1 (lower is better)
Translates to: TSHLAPEWSYWSGLE*ALRDPPERVFLNQE
Trigger: CTCCTGGTTCAGGAACACTCTCTCAGGAGGATCTCGAAGTGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 90 bp GGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTCCATaGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATT +
Preference number: 1 (lower is better)
Translates to: GSSKPVQTWSLVVAP*HSHSIRAGSGARGI
Trigger: AATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR TCA 90 bp GAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGTCATaGCCCATGGCGATCTCACCTCCACAGCAGGCCTGGAGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: EASLQKMPRTQVTKS*PMAISPPQQAWRLG
Trigger: CCCCAGCCTCCAGGCCTGCTGTGGAGGTGAGATCGCCATGGGTCATGACTTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 90 bp TCCAGAGGCTTCACCTCATCAGCCTCACGCTGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTTAGTTTGGTCCAGGCCACACCCTTC +
Preference number: 1 (lower is better)
Translates to: SRGFTSSASRCLKWA*MKACTFSLVQATPF
Trigger: GAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGAGGTGAAGCCTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 90 bp CGCAGGATCCACCAAGACTTGCCTAGCCCTTCCTCGATGTTGACCTaGCAGCACTTGAACCGCTGGACACAACCTTCTGTGAAGCAGGCA +
Preference number: 1 (lower is better)
Translates to: RRIHQDLPSPSSMLT*QHLNRWTQPSVKQA
Trigger: TGCCTGCTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 90 bp GAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTaGCTCCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCA +
Preference number: 1 (lower is better)
Translates to: EAMVVPNRFRLGHWW*LHGILIPSGQAPGP
Trigger: TGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR GCA 90 bp TGGATGGAATGGGGGCTGCATGCCTGGCAAGCACTCAGAGAAAACTaGCTGAGGACCCAACGGCCATTCCAGAGAATGTCTCCCAGGAAA +
Preference number: 1 (lower is better)
Translates to: WMEWGLHAWQALREN*LRTQRPFQRMSPRK
Trigger: TTTCCTGGGAGACATTCTCTGGAATGGCCGTTGGGTCCTCAGGCAGTTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCATTCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CCA 90 bp AGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTaGTGGCTCCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGG +
Preference number: 1 (lower is better)
Translates to: REAMVVPNRFRLGHW*WLHGILIPSGQAPG
Trigger: CCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR GCA 90 bp ACCTCATCAGCCTCACGCTGCTTAAAGTGGGCCTGCATGAAGGCGTaGACCTTTAGTTTGGTCCAGGCCACACCCTTCTTGATACGGATC +
Preference number: 1 (lower is better)
Translates to: TSSASRCLKWACMKA*TFSLVQATPFLIRI
Trigger: GATCCGTATCAAGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 90 bp AACTCATCCAGAGGCTTCACCTCATCAGCCTCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGCACCTTTAGTTTGGTCCAGGCCACA +
Preference number: 1 (lower is better)
Translates to: NSSRGFTSSASRCLK*ACMKACTFSLVQAT
Trigger: TGTGGCCTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGAGGTGAAGCCTCTGGATGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 90 bp GGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTaGTGGTGGCTCCATGGCATTCTCATTCCATCCGGGCAGGCTCCG +
Preference number: 1 (lower is better)
Translates to: GREAMVVPNRFRLGH*WWLHGILIPSGQAP
Trigger: CGGAGCCTGCCCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR CCA 90 bp ACGTGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTaGTCATTGGTGGTGGCTCCATGGCATTCTCATTCCATCCGGGCA +
Preference number: 1 (lower is better)
Translates to: TWGKRSNGSSKPVQT*SLVVAPWHSHSIRA
Trigger: TGCCCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR TCA 90 bp ACGAGCACAATGTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTaGAGAAACCTGATTGTTTTCCCCCACCCATCTCCAAACCACGTG +
Preference number: 1 (lower is better)
Translates to: TSTMFGIGLSKSSSA*RNLIVFPHPSPNHV
Trigger: CACGTGGTTTGGAGATGGGTGGGGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAACATTGTGCTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 90 bp TGCCCAAGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTaGCCTTGGCAGGTCACTGCTCAAGATGCAGCTGTGTTACGTGGT +
Preference number: 1 (lower is better)
Translates to: CPSIRKSVSLGSGVL*PWQVTAQDAAVLRG
Trigger: ACCACGTAACACAGCTGCATCTTGAGCAGTGACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCTTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 90 bp AATGGTATTGGGCTTGGGCACTCGGAGAGGATGCTCCAAGGCATCTaGAAAGTCTGCCAGCTTACAGTACTCAATGAACTGGGTGGCATC +
Preference number: 1 (lower is better)
Translates to: NGIGLGHSERMLQGI*KVCQLTVLNELGGI
Trigger: GATGCCACCCAGTTCATTGAGTACTGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCCCAAGCCCAATACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 90 bp AACATACAGGTGAAAAAGGCAGAAGTAAGGCCAGTCCAGCTGGGTTaGCTGACGTCATCTCTGAGGGCTCTGCCAGGTGGATTAGGTGAA +
Preference number: 1 (lower is better)
Translates to: NIQVKKAEVRPVQLG*LTSSLRALPGGLGE
Trigger: TTCACCTAATCCACCTGGCAGAGCCCTCAGAGATGACGTCAGCCAACCCAGCTGGACTGGCCTTACTTCTGCCTTTTTCACCTGTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 90 bp AAACTTCAAATACAGCGGAGGTGGCTTCTTTCCTATGAGGCTGGCTaGTGGGTGCCAGATACCAAGGCCCATGTGTTACTGAGGAGACAG +
Preference number: 1 (lower is better)
Translates to: KLQIQRRWLLSYEAG*WVPDTKAHVLLRRQ
Trigger: CTGTCTCCTCAGTAACACATGGGCCTTGGTATCTGGCACCCATCAGCCAGCCTCATAGGAAAGAAGCCACCTCCGCTGTATTTGAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 90 bp CCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACATCACATaGGCATTCCTCTTTAGAAAAAGCACATCTCATTCTTGCAGAGGA +
Preference number: 1 (lower is better)
Translates to: PCLALLAHTSHPDIT*AFLFRKSTSHSCRG
Trigger: TCCTCTGCAAGAATGAGATGTGCTTTTTCTAAAGAGGAATGCTCATGTGATGTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR GCA 90 bp ATAGCGATGAGCTCAATGGTATTGGGCTTGGGCACTCGGAGAGGATaGTCCAAGGCATCTGCAAAGTCTGCCAGCTTACAGTACTCAATG +
Preference number: 1 (lower is better)
Translates to: IAMSSMVLGLGTRRG*SKASAKSASLQYSM
Trigger: CATTGAGTACTGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCCCAAGCCCAATACCATTGAGCTCATCGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 90 bp CACCATTCCGGTGGATGTCTGCACCGGTGTGATTGGCGATACAGTTaGCCTTCTTTTCATACAACTCATCCAGAGGCTTCACCTCATCAG +
Preference number: 1 (lower is better)
Translates to: HHSGGCLHRCDWRYS*PSFHTTHPEASPHQ
Trigger: CTGATGAGGTGAAGCCTCTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCAGACATCCACCGGAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR GCA 90 bp TTTTCATACAACTCATCCAGAGGCTTCACCTCATCAGCCTCACGCTaGTTAAAGTGGGCCTGCATGAAGGCGTGCACCTTTAGTTTGGTC +
Preference number: 1 (lower is better)
Translates to: FSYNSSRGFTSSASR*LKWACMKACTFSLV
Trigger: GACCAAACTAAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGAGGTGAAGCCTCTGGATGAGTTGTATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 90 bp TGTGCTAAGGTCCCAATTCCCAGACCCCTCCCAGGACTCAAGAATTaGGATAGTCAAGCAACAAACACACCAAGACAGGCTTCCCTTGTA +
Preference number: 1 (lower is better)
Translates to: CAKVPIPRPLPGLKN*DSQATNTPRQASLV
Trigger: TACAAGGGAAGCCTGTCTTGGTGTGTTTGTTGCTTGACTATCCCAATTCTTGAGTCCTGGGAGGGGTCTGGGAATTGGGACCTTAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 90 bp TCTTCTGGAAGTCACCATTCCGGTGGATGTCTGCACCGGTGTGATTaGCGATACAGTTGGCCTTCTTTTCATACAACTCATCCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: SSGSHHSGGCLHRCD*RYSWPSFHTTHPEA
Trigger: AGCCTCTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR TCA 90 bp CCATTCTTCTGGAAGTCACCATTCCGGTGGATGTCTGCACCGGTGTaGTTGGCGATACAGTTGGCCTTCTTTTCATACAACTCATCCAGA +
Preference number: 1 (lower is better)
Translates to: PFFWKSPFRWMSAPV*LAIQLAFFSYNSSR
Trigger: TCTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR GCA 90 bp GGCCTTCCCAGTCTGGTATTGGGTGTAGTACAAAAATTCTACGGATaGTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTG +
Preference number: 1 (lower is better)
Translates to: GLPSLVLGVVQKFYG*CCRSRLKRAGQFLV
Trigger: CACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTGTACTACACCCAATACCAGACTGGGAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 90 bp CTTTACCTATATACATTCTTCACACACACACACACACACCACATGTaGACACCCACCCACCCCACCCCACTTAGCCTCTATGTACAGCAA +
Preference number: 1 (lower is better)
Translates to: LYLYTFFTHTHTHHM*TPTHPTPLSLYVQQ
Trigger: TTGCTGTACATAGAGGCTAAGTGGGGTGGGGTGGGTGGGTGTGCACATGTGGTGTGTGTGTGTGTGTGTGAAGAATGTATATAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 90 bp TGTGCCATTGCCATTCTTCTGGAAGTCACCATTCCGGTGGATGTCTaGACCGGTGTGATTGGCGATACAGTTGGCCTTCTTTTCATACAA +
Preference number: 1 (lower is better)
Translates to: CAIAILLEVTIPVDV*TGVIGDTVGLLFIQ
Trigger: TTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGAATGGCAATGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR GCA 90 bp CCCAGTCTGGTATTGGGTGTAGTACAAAAATTCTACGGATGCTGCTaGAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAA +
Preference number: 1 (lower is better)
Translates to: PSLVLGVVQKFYGCC*RSRLKRAGQFLVVQ
Trigger: TTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTGTACTACACCCAATACCAGACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 90 bp CTTCCCAGTCTGGTATTGGGTGTAGTACAAAAATTCTACGGATGCTaGTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTC +
Preference number: 1 (lower is better)
Translates to: LPSLVLGVVQKFYGC*CRSRLKRAGQFLVV
Trigger: GACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTGTACTACACCCAATACCAGACTGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 90 bp CTGTGGGCAACATCTGAGAAAAGAAAGAGGCATCATTACAGAAGATaGCCAGGACTCAAGTCACAAAGTCATGACCCATGGCGATCTCAC +
Preference number: 1 (lower is better)
Translates to: LWATSEKRKRHHYRR*PGLKSQSHDPWRSH
Trigger: GTGAGATCGCCATGGGTCATGACTTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAGATGTTGCCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 90 bp TTAAAAAGTGAAACTTCAAATACAGCGGAGGTGGCTTCTTTCCTATaGGGCTGGCTGATGGGTGCCAGATACCAAGGCCCATGTGTTACT +
Preference number: 1 (lower is better)
Translates to: LKSETSNTAEVASFL*GWLMGARYQGPCVT
Trigger: AGTAACACATGGGCCTTGGTATCTGGCACCCATCAGCCAGCCTCATAGGAAAGAAGCCACCTCCGCTGTATTTGAAGTTTCACTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 90 bp ATTCTTTCAGTTCGATGCCTGTTAACTGCGGGTGTAAACTGCTGGTaGTGGTGTCATTTACTACCAAAGAAGTGTGGAGCAGGATGGGTG +
Preference number: 1 (lower is better)
Translates to: ILSVRCLLTAGVNCW*WCHLLPKKCGAGWV
Trigger: CACCCATCCTGCTCCACACTTCTTTGGTAGTAAATGACACCATCACCAGCAGTTTACACCCGCAGTTAACAGGCATCGAACTGAAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 90 bp CCAACGGCCATTCCAGAGAATGTCTCCCAGGAAAAACATGCAGAATaGAAGGCCATTATCAACTGTACTGATGCTGCTTTAGAATGGTGG +
Preference number: 1 (lower is better)
Translates to: PTAIPENVSQEKHAE*KAIINCTDAALEWW
Trigger: CCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCATTCTGCATGTTTTTCCTGGGAGACATTCTCTGGAATGGCCGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CCA 90 bp TGCCATCATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGAT +
Preference number: 1 (lower is better)
Translates to: CHHANHFYALNEHNV*NRPEQVLLSLKKPD
Trigger: ATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATGATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR TCA 90 bp AAATTACCTTCAAAGTGCTTCTACTGCAAGGCAGATCGGTGTGTCTaGTTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGGTTCAGG +
Preference number: 1 (lower is better)
Translates to: KLPSKCFYCKADRCV*LWVGSSSPSSVWFR
Trigger: CCTGAACCATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCTTGCAGTAGAAGCACTTTGAAGGTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 90 bp AAAATCTCATCACTATGCCCTAGTAGCTTAATGACATCACTAGCATaGGCACATGGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCA +
Preference number: 1 (lower is better)
Translates to: KISSLCPSSLMTSLA*AHGVLGGILQLCCP
Trigger: TGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACCATGTGCTCATGCTAGTGATGTCATTAAGCTACTAGGGCATAGTGATGAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 90 bp CTTCCCAATCAAAGCCTTTGGTGCCATTTTCAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAACACACTTGTTTCGAAGGTTCCCCA +
Preference number: 1 (lower is better)
Translates to: LPNQSLWCHFQDSSR*SLWATQHTCFEGSP
Trigger: TGGGGAACCTTCGAAACAAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACCAAAGGCTTTGATTGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR GCA 90 bp GGTGTATGGATCTCATGCATGACTTCTGATCACGGCATGCCATCATaGAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCG +
Preference number: 1 (lower is better)
Translates to: GVWISCMTSDHGMPS*KSFLRIERAQCLES
Trigger: CGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATGATGGCATGCCGTGATCAGAAGTCATGCATGAGATCCATACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 90 bp GTGCAAGGGACTAGATTAGTAGTGTCCTGTGGTGTATGGATCTCATaGATGACTTCTGATCACGGCATGCCATCATGCAAATCATTTCTA +
Preference number: 1 (lower is better)
Translates to: VQGTRLVVSCGVWIS*MTSDHGMPSCKSFL
Trigger: TAGAAATGATTTGCATGATGGCATGCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCTAGTCCCTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 90 bp AAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAAAGCTCTaGTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGG +
Preference number: 1 (lower is better)
Translates to: KRAGQFLVVQQDRKL*LPTYCGLFYAKLVW
Trigger: CCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 90 bp CTCTGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTaGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGCAAGGCA +
Preference number: 1 (lower is better)
Translates to: LCLPTYCGLFYAKLV*WTVKLPSKCFYCKA
Trigger: TGCCTTGCAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 90 bp GAATGCAAGGCCATTATCAACTGTACTGATGCTGCTTTAGAATGGTaGACAAAACGAATGGAGGAGAAAGAGGAGATGTGGCAAAGTCAG +
Preference number: 1 (lower is better)
Translates to: ECKAIINCTDAALEW*TKRMEEKEEMWQSQ
Trigger: CTGACTTTGCCACATCTCCTCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CCA 90 bp GCAGAATGCAAGGCCATTATCAACTGTACTGATGCTGCTTTAGAATaGTGGACAAAACGAATGGAGGAGAAAGAGGAGATGTGGCAAAGT +
Preference number: 1 (lower is better)
Translates to: AECKAIINCTDAALE*WTKRMEEKEEMWQS
Trigger: ACTTTGCCACATCTCCTCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCATTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR TCA 90 bp CTCCCAGGAAAAACATGCAGAATGCAAGGCCATTATCAACTGTACTaGTGCTGCTTTAGAATGGTGGACAAAACGAATGGAGGAGAAAGA +
Preference number: 1 (lower is better)
Translates to: LPGKTCRMQGHYQLY*CCFRMVDKTNGGER
Trigger: TCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCATTCTGCATGTTTTTCCTGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTaGACTGTGAAATTACCTTCAAAGTGCTTCTACTGCAAGGCAGAT +
Preference number: 1 (lower is better)
Translates to: CLPTYCGLFYAKLVW*TVKLPSKCFYCKAD
Trigger: ATCTGCCTTGCAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 90 bp AGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTaGCCTTCCCTAGCGCCTTTGCCTCTGTATCTCAAAACGCTTTAC +
Preference number: 1 (lower is better)
Translates to: SIYGTISASLSPIIL*PSLAPLPLYLKTLY
Trigger: GTAAAGCGTTTTGAGATACAGAGGCAAAGGCGCTAGGGAAGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 90 bp GTTCACATGCTAAAGTCTCTTTTCACTCTTTGTATAGAGACTTCCTaGCACATTCAACTGCAGCATCTTGGCTTTGAAATCCAGTCATTA +
Preference number: 1 (lower is better)
Translates to: VHMLKSLFTLCIETS*HIQLQHLGFEIQSL
Trigger: TAATGACTGGATTTCAAAGCCAAGATGCTGCAGTTGAATGTGTCAGGAAGTCTCTATACAAAGAGTGAAAAGAGACTTTAGCATGTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 90 bp CATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAAATaGCATGGGCTAAATGTGAGTGTGTGTGTGTGTTTTCTTTTTGCT +
Preference number: 1 (lower is better)
Translates to: HVEKMRFMSKKLTIK*HGLNVSVCVCFLFA
Trigger: AGCAAAAAGAAAACACACACACACACTCACATTTAGCCCATGTCATTTAATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 90 bp TGTACTGGACACAGAGCAGCATTAAATAGTTCATCTTGCAAAATGTaGAACAATGGCTGTATGTTAGAGATGTCTGTTAAACATATACAC +
Preference number: 1 (lower is better)
Translates to: CTGHRAALNSSSCKM*NNGCMLEMSVKHIH
Trigger: GTGTATATGTTTAACAGACATCTCTAACATACAGCCATTGTTGCACATTTTGCAAGATGAACTATTTAATGCTGCTCTGTGTCCAGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 90 bp ATTTATATATCTATATATATATGTGCAGTGATACTGTGGCTGCGCTaGTCTTTGATTGGCTTCGTTAATATTTGGCAAAGCATTGCCACT +
Preference number: 1 (lower is better)
Translates to: IYISIYICAVILWLR*SLIGFVNIWQSIAT
Trigger: AGTGGCAATGCTTTGCCAAATATTAACGAAGCCAATCAAAGAGCAGCGCAGCCACAGTATCACTGCACATATATATATAGATATATAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 90 bp GTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGACAGTaGTTATTTAAGTGCAGTTCACTAACTCCAAGTCTCTTAAATTTG +
Preference number: 1 (lower is better)
Translates to: VLILVRQTAVEHDRQ*LFKCSSLTPSLLNL
Trigger: CAAATTTAAGAGACTTGGAGTTAGTGAACTGCACTTAAATAATCACTGTCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCCTCCACAGCAGGCCTaGAGGCTGGGGGCCGAGGGG +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQPPQQA*RLGAEG
Trigger: CCCCTCGGCCCCCAGCCTCCAGGCCTGCTGTGGAGG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGTCTGTGGGCCTGTCTaGGGCGATGGAGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLVCGPV*GDGGQG
Trigger: GCCCTGCCCTCCATCGCCCCAGACAGGCCCACAGAC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAGTGGCTTCTTTCCTATaGGGCTGGCTGATGGGTGCC +
Preference number: 2 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAVASFL*GWLMGA
Trigger: GGCACCCATCAGCCAGCCTCATAGGAAAGAAGCCAC...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCATGTTTGGAATCGGCCTaGGCAAGTCCTCCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWACLESA*ASPPQP
Trigger: AGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAACA...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCGCGGTATCGACCCATaGCTGGAGAAAGCCACAATG +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQRGIDP*LEKATM
Trigger: CATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGGCAACGGAAATATGCTaGTCCCGGCAGCCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQATEIC*SRQPLF
Trigger: GAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGC...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCATCTCGCTCCAGAGTaGAGCTACTGGAGCGGACTA +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQHLAPE*SYWSGL
Trigger: TAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp GGGTTCCCACAATCTCCCTTAAAGCCACTCCCTGGGTGTTCCTTATCTAGGCTGGGGGGCGGTTTAGGATaGGCAGCAGCAGGCCATCCC +
Preference number: 2 (lower is better)
Translates to: GFPQSPLKPLPGCSLSRLGGGLG*AAAGHP
Trigger: GGGATGGCCTGCTGCTGCCCATCCTAAACCGCCCCC...CAGCCTAGATAAGGAACACCCAGGGAGTGGCTTTAAGGGAGATTGTGGGAACCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTGTGTGAGTATGCGATaGCCCCTCTGCAGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQCVSMR*PLCRRE
Trigger: CTCTCTTCTGCAGAGGGGTCATCGCATACTCACACA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTGCAAGGGAATGCACTaGGGGAAGCTGGAACATCCT +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQCKGMH*GKLEHP
Trigger: AGGATGTTCCAGCTTCCCTCAGTGCATTCCCTTGCA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGATGGAATGGAAGATATaGCGCTCCCCCAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQMEWKI*RSPRSH
Trigger: GTGGCTTCTGGGGGAGCGTCATATCTTCCATTCCAT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGGCCAGGTGGATTAGGTaGAGAGAGGTTTTATGGGCC +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQARWIR*REVLWA
Trigger: GGCCCATAAAACCTCTCTTCACCTAATCCACCTGGC...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACTGAGAGAGTGTTCCTaGACCAGGAGACATGGCCTA +
Preference number: 2 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWALRECS*TRRHGL
Trigger: TAGGCCATGTCTCCTGGTTCAGGAACACTCTCTCAG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCATATGAGCTTGCAGAGTaGAGGCTGTTGGGCATCGCA +
Preference number: 2 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAYELAE*RLLGIA
Trigger: TGCGATGCCCAACAGCCTCCACTCTGCAAGCTCATA...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACATCTCCAAACCACGTaGAGCCCATGTGGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAHLQTT*SPCGED
Trigger: ATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTCAGTTCAGAATATCTaGACCCCTCGCGGTATCGAC +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQSVQNI*TPRGID
Trigger: GTCGATACCGCGAGGGGTTCAGATATTCTGAACTGA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGAGCCATGCAGTGTGTaGGTATGCGATGACCCCTCT +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLEPCSV*VCDDPS
Trigger: AGAGGGGTCATCGCATACTCACACACTGCATGGCTC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTGGAAGGACAGTGGGTaGAGGATAAAAAGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQWKDSG*RIKRWE
Trigger: TTCCCACCTTTTTATCCTTCACCCACTGTCCTTCCA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTCAAAGTGCTTCTACTaGAAGGCAGATCGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQSKCFY*KADRCV
Trigger: GACACACCGATCTGCCTTGCAGTAGAAGCACTTTGA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GTCCATCCAGCCTTTGAAGGTTGCTACTTGAAGAAGGGCCAGGTATCCTGCCCCGCCCTTTACAGTCTCTaGAGGTCCCAGAAGTCCCCA +
Preference number: 2 (lower is better)
Translates to: VHPAFEGCYLKKGQVSCPALYSL*RSQKSP
Trigger: TGGGGACTTCTGGGACCTGCAGAGACTGTAAAGGGC...GGGGCAGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548086.3
3UTR-3UTR CCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGCAACGGAAATATGCTaGTCCCGGCAGCCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSATEIC*SRQPLF
Trigger: GAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGAAACCAAGTGGGCTTaGTTCAGAGGCGGCTCCATC +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLETKWA*FRGGSI
Trigger: GATGGAGCCGCCTCTGAACCAAGCCCACTTGGTTTC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCATCTGTCTGTCTGGTTTaGGGATGTACATTGGCTGAC +
Preference number: 2 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWASVCLV*GCTLAD
Trigger: GTCAGCCAATGTACATCCCCAAACCAGACAGACAGA...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAACTAGCATGAGCACATaGTGTACTTGGCGGGATCTT +
Preference number: 2 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWATSMST*CTWRDL
Trigger: AAGATCCCGCCAAGTACACCATGTGCTCATGCTAGT...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CAA 90 bp ATGATGTACTTCTCCACGCTGCTGCCAATGCCGCTGGTTGTGCCATaGCCATTCTTCTGGAAGTCACCATTCCGGTGGATGTCTGCACCG +
Preference number: 2 (lower is better)
Translates to: MMYFSTLLPMPLVVP*PFFWKSPFRWMSAP
Trigger: CGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGAATGGCAATGGCACAACCAGCGGCATTGGCAGCAGCGTGGAGAAGTACATCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 90 bp GTTTTCCGCAGGATCCACCAAGACTTGCCTAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAACCGCTGGACACAACCTTCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: VFRRIHQDLPSPSSM*TWQHLNRWTQPSVK
Trigger: CTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCTGCGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 90 bp GGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATaGGTGGTGGCTCCATGGCATTCTCATTCCATCCGGGCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: GKRSNGSSKPVQTWS*VVAPWHSHSIRAGS
Trigger: GGAGCCTGCCCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCCTCACCCACCTCTGTaGGCAAGGGAAGCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPPHPPL*AREALL
Trigger: GAGCAGGGCTTCCCTTGCCCACAGAGGTGGGTGAGG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CATTGGCAGATCCATAGCGATGAGCTCAATGGTATTGGGCTTGGGCACTCGGAGTCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGC +
Preference number: 2 (lower is better)
Translates to: HWQIHSDELNGIGLGHSESRCLK*ACMKAC
Trigger: GCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGA...CTCCGAGTGCCCAAGCCCAATACCATTGAGCTCATCGCTATGGATCTGCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 90 bp TCACGCTGCTTAAAGTGGGCCTGCATGAAGGCGTGCACCTTTAGTTaGGTCCAGGCCACACCCTTCTTGATACGGATCACTGAGATCTGG +
Preference number: 2 (lower is better)
Translates to: SRCLKWACMKACTFS*VQATPFLIRITEIW
Trigger: CCAGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCAGCCTGAAGAAACCTaGTTGTTTTCCCCCACCCAT +
Preference number: 2 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSQPEET*LFSPTH
Trigger: ATGGGTGGGGGAAAACAATCAGGTTTCTTCAGGCTG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAGGGAGCGGGGTCCTTTaGCCTTGGCAGGTCACTGCT +
Preference number: 2 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRGSGVL*PWQVTA
Trigger: AGCAGTGACCTGCCAAGGGCAAAGGACCCCGCTCCC...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTCGATGCCTGTTAACTaGGGGTGTAAACTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: REVLWASKHRPVVGNATCSMPVN*GCKLLV
Trigger: CACCAGCAGTTTACACCCGCAGTTAACAGGCATCGA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGATTCTTTCAGTTCGATaGCTGTTAACTGCGGGTGTA +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQILSVR*LLTAGV
Trigger: TACACCCGCAGTTAACAGGCATCGAACTGAAAGAAT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp CTGCTTTCATACACTGGTATCCCTCTGGGCATTGCCCAGCATCAGAACTGTTCCGCACTCAGAGAAAACTaGCTGAGGACCCAACGGCCA +
Preference number: 2 (lower is better)
Translates to: LLSYTGIPLGIAQHQNCSALREN*LRTQRP
Trigger: TGGCCGTTGGGTCCTCAGGCAGTTTTCTCTGAGTGC...GGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGCAACGGAAATATGCTaGTCCCGGCAGCCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPATEIC*SRQPLF
Trigger: GAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR CCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATGTCTCCCCCATGTACTaGACACAGAGCAGCATTAAA +
Preference number: 2 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHVSPMY*TQSSIK
Trigger: TTTAATGCTGCTCTGTGTCCAGTACATGGGGGAGAC...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCCTCACCCACCTCTGTaGGCAAGGGAAGCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNPHPPL*AREALL
Trigger: GAGCAGGGCTTCCCTTGCCCACAGAGGTGGGTGAGG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGAGTAAAGAAACCAAGTaGGCTTGGTTCAGAGGCGGC +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLSKETK*AWFRGG
Trigger: GCCGCCTCTGAACCAAGCCCACTTGGTTTCTTTACT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTCCTCCACAGCAGGCCTaGAGGCTGGGGGCCGAGGGG +
Preference number: 2 (lower is better)
Translates to: SSIYGTISASLSPIILCPPPQQA*RLGAEG
Trigger: CCCCTCGGCCCCCAGCCTCCAGGCCTGCTGTGGAGG...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp GGGTTCCCACAATCTCCCTTAAAGCCACTCCCTGGGTGTTCCTTATCTAGGCTGTCCATCTGCTTGCTTTaGGTGTCTGTCTCCACCATC +
Preference number: 2 (lower is better)
Translates to: GFPQSPLKPLPGCSLSRLSICLL*VSVSTI
Trigger: GATGGTGGAGACAGACACTCAAAGCAAGCAGATGGA...CAGCCTAGATAAGGAACACCCAGGGAGTGGCTTTAAGGGAGATTGTGGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGGTGTATGGATCTCATaGATGACTTCTGATCACGGC +
Preference number: 2 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSGVWIS*MTSDHG
Trigger: GCCGTGATCAGAAGTCATGCATGAGATCCATACACC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTCTCATGAAAACCAGTaGAGTAAAGAAACCAAGTGG +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQSHENQ*SKETKW
Trigger: CCACTTGGTTTCTTTACTGCACTGGTTTTCATGAGA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GGGTTCCCACAATCTCCCTTAAAGCCACTCCCTGGGTGTTCCTTATCTAGGCTGCCAGCCTTTGAAGGTTaGTACTTGAAGAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: GFPQSPLKPLPGCSLSRLPAFEG*YLKKGQ
Trigger: CTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGG...CAGCCTAGATAAGGAACACCCAGGGAGTGGCTTTAAGGGAGATTGTGGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGCAACGGAAATATGCTaGTCCCGGCAGCCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: PISKPREAHVEKMRFMSKATEIC*SRQPLF
Trigger: GAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGTCTCCCCCATGTACTaGACACAGAGCAGCATTAAA +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLVSPMY*TQSSIK
Trigger: TTTAATGCTGCTCTGTGTCCAGTACATGGGGGAGAC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGTCTGTCTGTCTGGTTTaGGGATGTACATTGGCTGAC +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLSVCLV*GCTLAD
Trigger: GTCAGCCAATGTACATCCCCAAACCAGACAGACAGA...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CAA 90 bp TGCATGAAGGCGTGCACCTTTAGTTTGGTCCAGGCCACACCCTTCTaGATACGGATCACTGAGATCTGGAGGTTGTTCATTTCCCCATCG +
Preference number: 2 (lower is better)
Translates to: CMKACTFSLVQATPF*IRITEIWRLFISPS
Trigger: CGATGGGGAAATGAACAACCTCCAGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGCCTTCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 90 bp GACTCGCCCACAGCAATGGGTACCCGTACAGTCAAGTTGGGGTTGTaGATGAAGGACATGTGGTCCTCATCAATGATGTACTTCTCCACG +
Preference number: 2 (lower is better)
Translates to: DSPTAMGTRTVKLGL*MKDMWSSSMMYFST
Trigger: CGTGGAGAAGTACATCATTGATGAGGACCACATGTCCTTCATCAACAACCCCAACTTGACTGTACGGGTACCCATTGCTGTGGGCGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTGTTTGGAATCGGCCTaGGCAAGTCCTCCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYCLESA*ASPPQP
Trigger: AGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAACA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTCAGTGGAGAAATGTaGTGGAGGCAGGGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFLSGEM*WRQGEP
Trigger: TGGCTCCCCCTGCCTCCATCACATTTCTCCACTGAG...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCGGCTGCGCTGCTCTTTaGTTGGCTTCGTTAATATTT +
Preference number: 2 (lower is better)
Translates to: REVLWASKHRPVVGNATCGCAAL*LASLIF
Trigger: AAATATTAACGAAGCCAATCAAAGAGCAGCGCAGCC...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGACTGTGGGCAACATCTaGGAAAAGAAAGAGGCATCA +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLTVGNI*EKKEAS
Trigger: TGATGCCTCTTTCTTTTCTCAGATGTTGCCCACAGT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGCTGCAACGGAAATATaGTGGTCCCGGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGAATEI*WSRQPL
Trigger: GAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAGC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTGCTGCAACGGAAATATaGTGGTCCCGGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFAATEI*WSRQPL
Trigger: GAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAGC...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAAAATACAGTGAACGGTaGAGGGCTGGGTCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTKYSER*RAGSCP
Trigger: TGGACAGGACCCAGCCCTGCACCGTTCACTGTATTT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGGGCAAGGGAAGCCCTaGTCAGTGGAGAAATGTGAT +
Preference number: 2 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQGQGKP*SVEKCD
Trigger: ATCACATTTCTCCACTGAGCAGGGCTTCCCTTGCCC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCTGGCTGCAAGGGAATaGACTGAGGGAAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYLAARE*TEGSWN
Trigger: GTTCCAGCTTCCCTCAGTGCATTCCCTTGCAGCCAG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTATTTGGCAAAGCATTaGCACTTACCCACTCAGCGA +
Preference number: 2 (lower is better)
Translates to: REVLWASKHRPVVGNATCYLAKH*HLPTQR
Trigger: TCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAGGAAGCCCTGCTCAGTaGAGAAATGTGATGGAGGCA +
Preference number: 2 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTGSPAQ*RNVMEA
Trigger: TGCCTCCATCACATTTCTCCACTGAGCAGGGCTTCC...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCTTTTTGCTAAACTGTaGGCAACATCTGAGAAAAGA +
Preference number: 2 (lower is better)
Translates to: DLPKATQRASGQARDRTQLFAKL*ATSEKR
Trigger: TCTTTTCTCAGATGTTGCCCACAGTTTAGCAAAAAG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTTTCTCCAAATACAGTaGACGGTGCAGGGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYFLQIQ*TVQGWV
Trigger: GACCCAGCCCTGCACCGTTCACTGTATTTGGAGAAA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGAGCCATGCAGTGTGTaGGTATGCGATGACCCCTCT +
Preference number: 2 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNEPCSV*VCDDPS
Trigger: AGAGGGGTCATCGCATACTCACACACTGCATGGCTC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGGAGCCATGCAGTGTGTaGGTATGCGATGACCCCTCT +
Preference number: 2 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVEPCSV*VCDDPS
Trigger: AGAGGGGTCATCGCATACTCACACACTGCATGGCTC...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTATGGAATGGAAGATATaGCGCTCCCCCAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPMEWKI*RSPRSH
Trigger: GTGGCTTCTGGGGGAGCGTCATATCTTCCATTCCAT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGTTTGGCTTAGAGGAGTaGTGGACTTTTTATCACGTC +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLFGLEE*WTFYHV
Trigger: GACGTGATAAAAAGTCCATCACTCCTCTAAGCCAAA...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATTCAGAGAAAACTGCCTaGGGACCCAACGGCCATTCC +
Preference number: 2 (lower is better)
Translates to: QNCSHRVKVPACQELCRNSEKTA*GPNGHS
Trigger: GGAATGGCCGTTGGGTCCTCAGGCAGTTTTCTCTGA...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCACGGCATGCCATCATaGAAATCATTTCTACGCATT +
Preference number: 2 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSHGMPS*KSFLRI
Trigger: AATGCGTAGAAATGATTTGCATGATGGCATGCCGTG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCTTCTGATCACGGCATaGCATCATGCAAATCATTTC +
Preference number: 2 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSLLITA*HHANHF
Trigger: GAAATGATTTGCATGATGGCATGCCGTGATCAGAAG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGACGCGGTATCGACCCATaGCTGGAGAAAGCCACAATG +
Preference number: 2 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRRGIDP*LEKATM
Trigger: CATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCG...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGCTGGCTGCAAGGGAATaGACTGAGGGAAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVLAARE*TEGSWN
Trigger: GTTCCAGCTTCCCTCAGTGCATTCCCTTGCAGCCAG...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAAAAATCTCATCACTATaGCCTAGTAGCTTAATGACA +
Preference number: 2 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAKISSL*PSSLMT
Trigger: TGTCATTAAGCTACTAGGGCATAGTGATGAGATTTT...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCATAGTACAAGCCATTTaGGATCAAAGTCTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: REVLWASKHRPVVGNATCIVQAI*DQSLPH
Trigger: ATGGGGGAGACTTTGATCCCAAATGGCTTGTACTAT...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGCCAGGACTCAAGAATTaGGATAGTCAAGCAACAAAC +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLPGLKN*DSQATN
Trigger: GTTTGTTGCTTGACTATCCCAATTCTTGAGTCCTGG...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CTGCTTTCATACACTGGTATCCCTCTGGGCATTGCCCAGCATCAGAACTGTTCCAAGGTTAAGAACCACTaGGCTAGCTCAACCAGAACC +
Preference number: 2 (lower is better)
Translates to: LLSYTGIPLGIAQHQNCSKVKNH*ASSTRT
Trigger: GGTTCTGGTTGAGCTAGCCCAGTGGTTCTTAACCTT...GGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR TCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACATATGGATCTCATGCATaGCTTCTGATCACGGCATGC +
Preference number: 2 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTYGSHA*LLITAC
Trigger: GCATGCCGTGATCAGAAGTCATGCATGAGATCCATA...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTTGTGTGAGTATGCGATaGCCCCTCTGCAGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFCVSMR*PLCRRE
Trigger: CTCTCTTCTGCAGAGGGGTCATCGCATACTCACACA...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATGCAAGGGAATGCACTaGGGGAAGCTGGAACATCCT +
Preference number: 2 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRCKGMH*GKLEHP
Trigger: AGGATGTTCCAGCTTCCCTCAGTGCATTCCCTTGCA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGCAGATCGGTGTGTCTaGTTATGGGTTGGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQADRCV*LWVGSS
Trigger: AGAAGAACCAACCCATAATCAGACACACCGATCTGC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGTGGCTTCTTTCCTATaGGGCTGGCTGATGGGTGCC +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKVASFL*GWLMGA
Trigger: GGCACCCATCAGCCAGCCTCATAGGAAAGAAGCCAC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCAAATACAGTGAACGGTaGAGGGCTGGGTCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFKYSER*RAGSCP
Trigger: TGGACAGGACCCAGCCCTGCACCGTTCACTGTATTT...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATACCACGCTGCTGCCAATaGCGCTGGTTGTGCCATTGC +
Preference number: 2 (lower is better)
Translates to: SKLIFTFFHLISVLFPSIPRCCQ*RWLCHC
Trigger: GCAATGGCACAACCAGCGGCATTGGCAGCAGCGTGG...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGTATCGACCCATGCCTaGAGAAAGCCACAATGCAGA +
Preference number: 2 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYVSTHA*RKPQCR
Trigger: TCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATAC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCTAAGTTGCATTGACTaGTGTGGAACATGCAGTAAC +
Preference number: 2 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPLSCID*CGTCSN
Trigger: GTTACTGCATGTTCCACATCAGTCAATGCAACTTAG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCAGCCTGAAGAAACCTaGTTGTTTTCCCCCACCCAT +
Preference number: 2 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNQPEET*LFSPTH
Trigger: ATGGGTGGGGGAAAACAATCAGGTTTCTTCAGGCTG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTCAGTTCAGAATATCTaGACCCCTCGCGGTATCGAC +
Preference number: 2 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFSVQNI*TPRGID
Trigger: GTCGATACCGCGAGGGGTTCAGATATTCTGAACTGA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTTCAGTTCAGAATATCTaGACCCCTCGCGGTATCGAC +
Preference number: 2 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFSVQNI*TPRGID
Trigger: GTCGATACCGCGAGGGGTTCAGATATTCTGAACTGA...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTATGACATCACTAGCATaGGCACATGGTGTACTTGGC +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPMTSLA*AHGVLG
Trigger: GCCAAGTACACCATGTGCTCATGCTAGTGATGTCAT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGAGAGAGTGAGTGAGTaGGCAGGTGGAAGGACAGTG +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKERVSE*AGGRTV
Trigger: CACTGTCCTTCCACCTGCTCACTCACTCACTCTCTC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTCTCCACAGCTGTTCTaGATTGATAATATTCAGGAA +
Preference number: 2 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSSPQLF*IDNIQE
Trigger: TTCCTGAATATTATCAATGCAGAACAGCTGTGGAGA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCATGCAGTAACCACCTaGCCAAGCATTAGAAAATCT +
Preference number: 2 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGHAVTT*PSIRKS
Trigger: AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCAAATTACCTTCAAAGTaGTTCTACTGCAAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: REVLWASKHRPVVGNATCKLPSK*FYCKAD
Trigger: ATCTGCCTTGCAGTAGAAGCACTTTGAAGGTAATTT...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAAAATTCTACGGATGCTaGTGCAGAAGCAGGCTTAAG +
Preference number: 2 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTKFYGC*CRSRLK
Trigger: CTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTCTCCTTGCCTGGCTCTaGTGGCACACACCTCCCACC +
Preference number: 2 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLLLAWL*WHTPPT
Trigger: GGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAG...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPNEHNV*NRPEQV
Trigger: GACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGTATCGACCCATGCCTaGAGAAAGCCACAATGCAGA +
Preference number: 2 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFVSTHA*RKPQCR
Trigger: TCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATAC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAAGTAAAGAAACCAAGTaGGCTTGGTTCAGAGGCGGC +
Preference number: 2 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRSKETK*AWFRGG
Trigger: GCCGCCTCTGAACCAAGCCCACTTGGTTTCTTTACT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATAGACTTGGTCATTGGTaGTGGCTCCATGGCATTCTC +
Preference number: 2 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDRLGHW*WLHGIL
Trigger: GAGAATGCCATGGAGCCACCACCAATGACCAAGTCT...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR-3UTR CCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATAAACCGGTTCAGACTTaGTCATTGGTGGTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDKPVQT*SLVVAP
Trigger: TGGAGCCACCACCAATGACCAAGTCTGAACCGGTTT...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCAGCCTGAAGAAACCTaGTTGTTTTCCCCCACCCAT +
Preference number: 2 (lower is better)
Translates to: HANHFYALNEHNVWNRPEQPEET*LFSPTH
Trigger: ATGGGTGGGGGAAAACAATCAGGTTTCTTCAGGCTG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATTATGGATCTCATGCATaGCTTCTGATCACGGCATGC +
Preference number: 2 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNYGSHA*LLITAC
Trigger: GCATGCCGTGATCAGAAGTCATGCATGAGATCCATA...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAAATCCAGTCATTAGGTaGGAAACCCCTGGACTAAAA +
Preference number: 2 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQNPVIR*ETPGLK
Trigger: TTTTAGTCCAGGGGTTTCTCACCTAATGACTGGATT...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTGCAGATCGGTGTGTCTaGTTATGGGTTGGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFADRCV*LWVGSS
Trigger: AGAAGAACCAACCCATAATCAGACACACCGATCTGC...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTGGGATGTACATTGGCTaGCAGCATCTAAGTTCTAAG +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPGMYIG*QHLSSK
Trigger: CTTAGAACTTAGATGCTGTCAGCCAATGTACATCCC...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAGGTGTATGGATCTCATaGATGACTTCTGATCACGGC +
Preference number: 2 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRGVWIS*MTSDHG
Trigger: GCCGTGATCAGAAGTCATGCATGAGATCCATACACC...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGACGCAACGGATCCATCTaGTTGTTGGATTGGGTTTGT +
Preference number: 2 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRRNGSI*LLDWVC
Trigger: ACAAACCCAATCCAACAAGCAGATGGATCCGTTGCG...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCAAAAATTCTACGGATaGTGCTGCAGAAGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPQKFYG*CCRSRL
Trigger: AAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGAAAATCTCATCACTATaGCCTAGTAGCTTAATGACA +
Preference number: 2 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLKISSL*PSSLMT
Trigger: TGTCATTAAGCTACTAGGGCATAGTGATGAGATTTT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTGTGGAGTATAAATACTaGACCAAGGACCTGGCTACA +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPVEYKY*TKDLAT
Trigger: TGTAGCCAGGTCCTTGGTGCAGTATTTATACTCCAC...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATTTCCCCATGAACAGCTaGAGTCCGATCAAGGCAAAA +
Preference number: 2 (lower is better)
Translates to: QNCSHRVKVPACQELCRNFPMNS*SPIKAK
Trigger: TTTTGCCTTGATCGGACTGCAGCTGTTCATGGGGAA...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR GCA 90 bp TTCTTCGGTCATGAAGATGTCCTGACCTCCGAACTTTTTCTTTTGTTGATTGAAACTTCTCCACGCTGCTaGCAATGCCGCTGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: FFGHEDVLTSELFLLLIETSPRC*QCRWLC
Trigger: GCACAACCAGCGGCATTGGCAGCAGCGTGGAGAAGT...TTCAATCAACAAAAGAAAAAGTTCGGAGGTCAGGACATCTTCATGACCGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR GCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATATGTACTTCTCCACGCTaGTGCCAATGCCGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: SKLIFTFFHLISVLFPSICTSPR*CQCRWL
Trigger: CAACCAGCGGCATTGGCAGCAGCGTGGAGAAGTACA...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCACGTGAAGCCCATGTaGAGAAGATGCGCTTTATGT +
Preference number: 2 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNHVKPM*RRCALC
Trigger: ACATAAAGCGCATCTTCTCCACATGGGCTTCACGTG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVNEHNV*NRPEQV
Trigger: GACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTT...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCACTAATCTTCACTGTTaGTCTTTTACAGGTTTACGT +
Preference number: 2 (lower is better)
Translates to: REVLWASKHRPVVGNATCTNLHC*SFTGLR
Trigger: ACGTAAACCTGTAAAAGACCAACAGTGAAGATTAGT...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATTTCAGACTTGGTCATTaGTGGTGGCTCCATGGCATT +
Preference number: 2 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDFRLGH*WWLHGI
Trigger: AATGCCATGGAGCCACCACCAATGACCAAGTCTGAA...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR CAA 90 bp AGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAAAGCTCTGCTaGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: RAGQFLVVQQDRKLC*PTYCGLFYAKLVWW
Trigger: CCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCTAAGTTGCATTGACTaGTGTGGAACATGCAGTAAC +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPLSCID*CGTCSN
Trigger: GTTACTGCATGTTCCACATCAGTCAATGCAACTTAG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGGACATGATACGAAATaGAATGAGCACCCCATAACT +
Preference number: 2 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYGHDTK*NEHPIT
Trigger: AGTTATGGGGTGCTCATTTCATTTCGTATCATGTCC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGATGGAATGGAAGATATaGCGCTCCCCCAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLMEWKI*RSPRSH
Trigger: GTGGCTTCTGGGGGAGCGTCATATCTTCCATTCCAT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCATGCAGTAACCACCTaGCCAAGCATTAGAAAATCT +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPHAVTT*PSIRKS
Trigger: AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGCTGCAACGGAAATATaGTGGTCCCGGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSAATEI*WSRQPL
Trigger: GAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAGC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCCCATGTGGAGAAGATaGGCTTTATGTCAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPPMWRR*ALCQRN
Trigger: GTTTCTTTGACATAAAGCGCATCTTCTCCACATGGG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCATGTGGAGAAGATaGGCTTTATGTCAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFPMWRR*ALCQRN
Trigger: GTTTCTTTGACATAAAGCGCATCTTCTCCACATGGG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCTGTGGTTTGTTCTATaGAAAACTAGTCTGGTGGAC +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPLWFVL*KTSLVD
Trigger: GTCCACCAGACTAGTTTTGCATAGAACAAACCACAG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAAGCACATGGTGTACTTaGCGGGATCTTACAGCTCTG +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKSTWCT*RDLTAL
Trigger: CAGAGCTGTAAGATCCCGCCAAGTACACCATGTGCT...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CAA 90 bp CAAAGTGCTTCTACTGCAAGGCAGATCGGTGTGTCTGATTATGGGTaGGTTCTTCTTCCCCCTCTAGTGTATGGTTCAGGAAGAATTTAT +
Preference number: 2 (lower is better)
Translates to: QSASTARQIGVSDYG*VLLPPLVYGSGRIY
Trigger: ATAAATTCTTCCTGAACCATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCTTGCAGTAGAAGCACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGGGACATGATACGAAATaGAATGAGCACCCCATAACT +
Preference number: 2 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVGHDTK*NEHPIT
Trigger: AGTTATGGGGTGCTCATTTCATTTCGTATCATGTCC...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGAATCCAGTCATTAGGTaGGAAACCCCTGGACTAAAA +
Preference number: 2 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVNPVIR*ETPGLK
Trigger: TTTTAGTCCAGGGGTTTCTCACCTAATGACTGGATT...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATGTATAGAGACTTCCTaGCACATTCAACTGCAGCAT +
Preference number: 2 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRCIETS*HIQLQH
Trigger: ATGCTGCAGTTGAATGTGTCAGGAAGTCTCTATACA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTGTATAGAGACTTCCTaGCACATTCAACTGCAGCAT +
Preference number: 2 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFCIETS*HIQLQH
Trigger: ATGCTGCAGTTGAATGTGTCAGGAAGTCTCTATACA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTGCCAGGTGGATTAGGTaGAGAGAGGTTTTATGGGCC +
Preference number: 2 (lower is better)
Translates to: SSIYGTISASLSPIILCPARWIR*REVLWA
Trigger: GGCCCATAAAACCTCTCTTCACCTAATCCACCTGGC...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCAGGCCACACCCTTCTTaGTACGGATCACTGAGATCT +
Preference number: 2 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSRPHPS*YGSLRS
Trigger: AGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCT...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR TCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATATGTGGTCCTCATCAATaGTGTACTTCTCCACGCTGC +
Preference number: 2 (lower is better)
Translates to: SKLIFTFFHLISVLFPSICGPHQ*CTSPRC
Trigger: GCAGCGTGGAGAAGTACATCATTGATGAGGACCACA...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR GCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATCTCCACAGCTGTTCTaGATTGATAATATTCAGGAA +
Preference number: 2 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQSPQLF*IDNIQE
Trigger: TTCCTGAATATTATCAATGCAGAACAGCTGTGGAGA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGCTGCAACGGAAATATaGTGGTCCCGGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNAATEI*WSRQPL
Trigger: GAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAGC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCCCATGTGGAGAAGATaGGCTTTATGTCAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNPMWRR*ALCQRN
Trigger: GTTTCTTTGACATAAAGCGCATCTTCTCCACATGGG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCTTCTGATCACGGCATaGCATCATGCAAATCATTTC +
Preference number: 2 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNLLITA*HHANHF
Trigger: GAAATGATTTGCATGATGGCATGCCGTGATCAGAAG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGGTGTATGGATCTCATaGATGACTTCTGATCACGGC +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKGVWIS*MTSDHG
Trigger: GCCGTGATCAGAAGTCATGCATGAGATCCATACACC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCATAGAAAGCTCTGCTTaGCGACTTACTGTGGTTTGT +
Preference number: 2 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFIESSA*RLTVVC
Trigger: ACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTAT...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATATAGTACAAGCCATTTaGGATCAAAGTCTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNIVQAI*DQSLPH
Trigger: ATGGGGGAGACTTTGATCCCAAATGGCTTGTACTAT...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATGTGCAGTGATACTGTaGCTGCGCTGCTCTTTGATT +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKCAVIL*LRCSLI
Trigger: AATCAAAGAGCAGCGCAGCCACAGTATCACTGCACA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTCAAAGTCATGACCCATaGCGATCTCACCTCCACAGC +
Preference number: 2 (lower is better)
Translates to: SSIYGTISASLSPIILCPQSHDP*RSHLHS
Trigger: GCTGTGGAGGTGAGATCGCCATGGGTCATGACTTTG...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCTGGGGGCTGCATGCCTaGCAAGCACTCAGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLWGLHA*QALREN
Trigger: GTTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCA...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR CCA 90 bp GGTGCCATTTTCAAGATAGCTCTCGTTGAAGTTTATGGGCCACACAACACACTTGCTTTTTCAATAGCATaGATGGAATGGGGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: GAIFKIALVEVYGPHNTLAFSIA*MEWGLH
Trigger: ATGCAGCCCCCATTCCATCCATGCTATTGAAAAAGC...AAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR CCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTCGTGCACCTTTAGTTTaGTCCAGGCCACACCCTTCT +
Preference number: 2 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFRAPLV*SRPHPS
Trigger: AGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACG...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 90 bp GTGGTCCAACAAGATAGAAAGCTCTGCTTGCCGACTTACTGTGGTTaGTTCTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCA +
Preference number: 2 (lower is better)
Translates to: VVQQDRKLCLPTYCG*FYAKLVWWTVKLPS
Trigger: TGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTGTTGGACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCTAAGTTGCATTGACTaGTGTGGAACATGCAGTAAC +
Preference number: 2 (lower is better)
Translates to: HANHFYALNEHNVWNRPELSCID*CGTCSN
Trigger: GTTACTGCATGTTCCACATCAGTCAATGCAACTTAG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATGTCCTAAGTTGCATTaGCTGATGTGGAACATGCAG +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKCPKLH*LMWNMQ
Trigger: CTGCATGTTCCACATCAGTCAATGCAACTTAGGACA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTAACGAACTTTTAAAGTaGTGCTTTCTGCTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFNELLK*CFLLLR
Trigger: TCTCAGAAGCAGAAAGCATCACTTTAAAAGTTCGTT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTAACGAACTTTTAAAGTaGTGCTTTCTGCTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPNELLK*CFLLLR
Trigger: TCTCAGAAGCAGAAAGCATCACTTTAAAAGTTCGTT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCATCATTTCTACGCATTaGACGAGCACAATGTTTGGA +
Preference number: 2 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGIISTH*TSTMFG
Trigger: TCCAAACATTGTGCTCGTTCAATGCGTAGAAATGAT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR TCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTACCCAGAAGGTGTATaGAGGACTTTTAAGAACTCA +
Preference number: 2 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFYPEGV*RTFKNS
Trigger: TGAGTTCTTAAAAGTCCTTCATACACCTTCTGGGTA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGGCAGATCGGTGTGTCTaGTTATGGGTTGGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLADRCV*LWVGSS
Trigger: AGAAGAACCAACCCATAATCAGACACACCGATCTGC...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGGCTGCGCTGCTCTTTaGTTGGCTTCGTTAATATTT +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKGCAAL*LASLIF
Trigger: AAATATTAACGAAGCCAATCAAAGAGCAGCGCAGCC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTCAAGTCACAAAGTCATaGCCCATGGCGATCTCACCT +
Preference number: 2 (lower is better)
Translates to: SSIYGTISASLSPIILCPQVTKS*PMAISP
Trigger: AGGTGAGATCGCCATGGGTCATGACTTTGTGACTTG...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATATTGAAGGTTGCTACTTaGAGAAGGGCCAGGTATCCT +
Preference number: 2 (lower is better)
Translates to: SKLIFTFFHLISVLFPSILKVAT*RRARYP
Trigger: AGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAA...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
3UTR-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTCTCCACAGCTGTTCTaGATTGATAATATTCAGGAA +
Preference number: 2 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFSPQLF*IDNIQE
Trigger: TTCCTGAATATTATCAATGCAGAACAGCTGTGGAGA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGCCTGACACATTCAACTaGAGCATCTTGGCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: LASLIFGKALPLTHSAKMPDTFN*SILALK
Trigger: TTTCAAAGCCAAGATGCTGCAGTTGAATGTGTCAGG...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACAAGATAGAAAGCTCTaGTTGCCGACTTACTGTGGT +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKQDRKL*LPTYCG
Trigger: ACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTT +
Preference number: 2 (lower is better)
Translates to: FFHLISVLFPSISFSHSVCLKWA*MKACTF
Trigger: AAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCA...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR GCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATACTAGTTTATCTTTGCTaGCTTCAGGATCCGACTCGC +
Preference number: 2 (lower is better)
Translates to: SKLIFTFFHLISVLFPSILVYLC*LQDPTR
Trigger: GCGAGTCGGATCCTGAAGGCAGCAAAGATAAACTAG...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCAAAATGTGCAACAATaGCTGTATGTTAGAGATGTC +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPQNVQQ*LYVRDV
Trigger: GACATCTCTAACATACAGCCATTGTTGCACATTTTG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTGCAAAACTAGTCTGGTaGACTGTGAAATTACCTTCA +
Preference number: 2 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFAKLVW*TVKLPS
Trigger: TGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGC...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTTATGCAAAACTAGTCTaGTGGACTGTGAAATTACCT +
Preference number: 2 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPYAKLV*WTVKLP
Trigger: AGGTAATTTCACAGTCCACCAGACTAGTTTTGCATA...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGTTTGGGGATGTACATTaGCTGACAGCATCTAAGTTC +
Preference number: 2 (lower is better)
Translates to: LASLIFGKALPLTHSAKMFGDVH*LTASKF
Trigger: GAACTTAGATGCTGTCAGCCAATGTACATCCCCAAA...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTTTGGTGGTGGCTCCATaGCATTCTCATTCCATCCGG +
Preference number: 2 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLLVVAP*HSHSIR
Trigger: CCGGATGGAATGAGAATGCCATGGAGCCACCACCAA...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR CAA 90 bp CAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTaGCCCTTCCCTAGCGCCTTTGCCTCTGTATCTCAAAACGCTTTA +
Preference number: 2 (lower is better)
Translates to: QHLWYHFSFLKSNNT*PFPSAFASVSQNAL
Trigger: TAAAGCGTTTTGAGATACAGAGGCAAAGGCGCTAGGGAAGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTGTCCTAAGTTGCATTaGCTGATGTGGAACATGCAG +
Preference number: 2 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLCPKLH*LMWNMQ
Trigger: CTGCATGTTCCACATCAGTCAATGCAACTTAGGACA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTAACGAACTTTTAAAGTaGTGCTTTCTGCTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFNELLK*CFLLLR
Trigger: TCTCAGAAGCAGAAAGCATCACTTTAAAAGTTCGTT...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCATCTCCAAACCACGTaGAGCCCATGTGGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYHLQTT*SPCGED
Trigger: ATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTCTCCACAGCTGTTCTaGATTGATAATATTCAGGAA +
Preference number: 2 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFSPQLF*IDNIQE
Trigger: TTCCTGAATATTATCAATGCAGAACAGCTGTGGAGA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACCCATGTGGAGAAGATaGGCTTTATGTCAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKPMWRR*ALCQRN
Trigger: GTTTCTTTGACATAAAGCGCATCTTCTCCACATGGG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTCGCAACGGATCCATCTaGTTGTTGGATTGGGTTTGT +
Preference number: 2 (lower is better)
Translates to: SSIYGTISASLSPIILCPRNGSI*LLDWVC
Trigger: ACAAACCCAATCCAACAAGCAGATGGATCCGTTGCG...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTTTCTACGGATGCTGCTaGAGAAGCAGGCTTAAGAGA +
Preference number: 2 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFFYGCC*RSRLKR
Trigger: TCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAA...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAATTCTTTCAGTTCGATaGCTGTTAACTGCGGGTGTA +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKILSVR*LLTAGV
Trigger: TACACCCGCAGTTAACAGGCATCGAACTGAAAGAAT...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCTCATCAGCCTCACGCTaGTTAAAGTGGGCCTGCATG +
Preference number: 2 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSSSASR*LKWACM
Trigger: CATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGA...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR GCA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCGGATCCACCAAGACTTaGCTAGCCCTTCCTCGATGT +
Preference number: 2 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSGSTKT*LALPRC
Trigger: ACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCC...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTTGTGCAGTGATACTGTaGCTGCGCTGCTCTTTGATT +
Preference number: 2 (lower is better)
Translates to: SSIYGTISASLSPIILCPCAVIL*LRCSLI
Trigger: AATCAAAGAGCAGCGCAGCCACAGTATCACTGCACA...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTTCAGCTGCTGCTCAGTaGCTTTGGCTCTGCATTTTA +
Preference number: 2 (lower is better)
Translates to: SSIYGTISASLSPIILCPSAAAQ*LWLCIL
Trigger: TAAAATGCAGAGCCAAAGCCACTGAGCAGCAGCTGA...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp GGTGCCATTTTCAAGATAGCTCTCGTTGAAGTTTATGGGCCACACAACACACTTGAGAAAGAGGAGATGTaGCAAAGTCAGTCTTATGTA +
Preference number: 2 (lower is better)
Translates to: GAIFKIALVEVYGPHNTLEKEEM*QSQSYV
Trigger: TACATAAGACTGACTTTGCCACATCTCCTCTTTCTC...AAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR CCA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATACTGGATTAGTTAACTaGGTAGATCTCTTCTGTGAT +
Preference number: 2 (lower is better)
Translates to: QNCSHRVKVPACQELCRNTGLVN*VDLFCD
Trigger: ATCACAGAAGAGATCTACCCAGTTAACTAATCCAGT...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR CCA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCGGATCACTGAGATCTaGAGGTTGTTCATTTCCCCA +
Preference number: 2 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPRITEI*RLFISP
Trigger: TGGGGAAATGAACAACCTCCAGATCTCAGTGATCCG...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR TCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCTCATGCATGACTTCTaGTCACGGCATGCCATCATG +
Preference number: 2 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNLMHDF*SRHAIM
Trigger: CATGATGGCATGCCGTGATCAGAAGTCATGCATGAG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTATGGATCTCATGCATaGCTTCTGATCACGGCATGC +
Preference number: 2 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSYGSHA*LLITAC
Trigger: GCATGCCGTGATCAGAAGTCATGCATGAGATCCATA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTCAAGATAGAAAGCTCTaGTTGCCGACTTACTGTGGT +
Preference number: 2 (lower is better)
Translates to: SSIYGTISASLSPIILCPQDRKL*LPTYCG
Trigger: ACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTG...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCAAGATAGAAAGCTCTaGTTGCCGACTTACTGTGGT +
Preference number: 2 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFQDRKL*LPTYCG
Trigger: ACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCCAGCCTTTGAAGGTTaGTACTTGAAGAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSPAFEG*YLKKGQ
Trigger: CTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGG...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
3UTR-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSNEHNV*NRPEQV
Trigger: GACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYNEHNV*NRPEQV
Trigger: GACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR CCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGTATGCAAAACTAGTCTaGTGGACTGTGAAATTACCT +
Preference number: 2 (lower is better)
Translates to: LASLIFGKALPLTHSAKMYAKLV*WTVKLP
Trigger: AGGTAATTTCACAGTCCACCAGACTAGTTTTGCATA...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CCA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATACTGGTCTCCAACTCCTaGTTTCATGTGATCCTCTTT +
Preference number: 2 (lower is better)
Translates to: TQRNTNSLNLLPISKTEILVSNS*FHVILF
Trigger: AAAGAGGATCACATGAAACCAGGAGTTGGAGACCAG...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667214.1
3UTR CAA 90 bp ATATCTATATATATATGTGCAGTGATACTGTGGCTGCGCTGCTCTTaGATTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCA +
Preference number: 2 (lower is better)
Translates to: ISIYICAVILWLRCS*IGFVNIWQSIATYP
Trigger: TGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAATCAAAGAGCAGCGCAGCCACAGTATCACTGCACATATATATATAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGTCAATTCTCCAGTATaGAGGCTAAACGATCGTCAT +
Preference number: 2 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFVNSPV*RLNDRH
Trigger: ATGACGATCGTTTAGCCTTCATACTGGAGAATTGAC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTGTCAATTCTCCAGTATaGAGGCTAAACGATCGTCAT +
Preference number: 2 (lower is better)
Translates to: SSIYGTISASLSPIILCPVNSPV*RLNDRH
Trigger: ATGACGATCGTTTAGCCTTCATACTGGAGAATTGAC...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGTCATCTTGCAAAATGTaGAACAATGGCTGTATGTTA +
Preference number: 2 (lower is better)
Translates to: LASLIFGKALPLTHSAKMSSCKM*NNGCML
Trigger: TAACATACAGCCATTGTTGCACATTTTGCAAGATGA...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCATGGTGAGATCCAAGTaGTTCTTAAGCACGTGCTTT +
Preference number: 2 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLMVRSK*FLSTCF
Trigger: AAAGCACGTGCTTAAGAATCACTTGGATCTCACCAT...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR TCA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCTTGATACGGATCACTaGGATCTGGAGGTTGTTCAT +
Preference number: 2 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSLDTDH*DLEVVH
Trigger: ATGAACAACCTCCAGATCTCAGTGATCCGTATCAAG...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR TCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTCACCCTGACATCACATaGGCATTCCTCTTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLHPDIT*AFLFRK
Trigger: TTTTCTAAAGAGGAATGCTCATGTGATGTCAGGGTG...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR-3UTR GCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCATGCAGTAACCACCTaGCCAAGCATTAGAAAATCT +
Preference number: 2 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPHAVTT*PSIRKS
Trigger: AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCACGGCATGCCATCATaGAAATCATTTCTACGCATT +
Preference number: 2 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPHGMPS*KSFLRI
Trigger: AATGCGTAGAAATGATTTGCATGATGGCATGCCGTG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATCATCTTGCAAAATGTaGAACAATGGCTGTATGTTA +
Preference number: 2 (lower is better)
Translates to: LRKERGIITEDAQDSSHKSSCKM*NNGCML
Trigger: TAACATACAGCCATTGTTGCACATTTTGCAAGATGA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR GCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCCTCCCAGGAAAAACATaGAGAATGCAAGGCCATTAT +
Preference number: 2 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLLPGKT*RMQGHY
Trigger: ATAATGGCCTTGCATTCTGCATGTTTTTCCTGGGAG...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR-3UTR CCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCGATGCTGCTTTAGAATaGTGGACAAAACGAATGGAG +
Preference number: 2 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLDAALE*WTKRME
Trigger: CTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATC...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CAA 90 bp CTTCTTCCCCCTCTAGTGTATGGTTCAGGAAGAATTTATTTGGATTaGGTTCACATGCTAAAGTCTCTTTTCACTCTTTGTATAGAGACT +
Preference number: 2 (lower is better)
Translates to: LLPPLVYGSGRIYLD*VHMLKSLFTLCIET
Trigger: AGTCTCTATACAAAGAGTGAAAAGAGACTTTAGCATGTGAACCAAATCCAAATAAATTCTTCCTGAACCATACACTAGAGGGGGAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCATCATTTCTACGCATTaGACGAGCACAATGTTTGGA +
Preference number: 2 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSIISTH*TSTMFG
Trigger: TCCAAACATTGTGCTCGTTCAATGCGTAGAAATGAT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR CCA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGAATTACTGTAATTCCATaGAGCCAGGAAGCAAATGAT +
Preference number: 2 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRITVIP*SQEAND
Trigger: ATCATTTGCTTCCTGGCTCCATGGAATTACAGTAAT...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CAA 90 bp AATTTATTTGGATTTGGTTCACATGCTAAAGTCTCTTTTCACTCTTaGTATAGAGACTTCCTGACACATTCAACTGCAGCATCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: NLFGFGSHAKVSFHS*YRDFLTHSTAASWL
Trigger: AAGCCAAGATGCTGCAGTTGAATGTGTCAGGAAGTCTCTATACAAAGAGTGAAAAGAGACTTTAGCATGTGAACCAAATCCAAATAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAACGAACTTTTAAAGTaGTGCTTTCTGCTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSNELLK*CFLLLR
Trigger: TCTCAGAAGCAGAAAGCATCACTTTAAAAGTTCGTT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTTATAAAATGTGTTCTTaGCCCAACCTCCCACTTTTT +
Preference number: 2 (lower is better)
Translates to: EVLERNRLTCYLKEFIPAYKMCS*PNLPLF
Trigger: AAAAAGTGGGAGGTTGGGGCAAGAACACATTTTATA...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR TCA 72 bp GGGCCTGTCTGGGGCGATGGAGGGCAGGGCCCAGTATaGGCTTGCAGAGTGGAGGCTGTTGGGCATCGCACA +
Preference number: 3 (lower is better)
Translates to: GPVWGDGGQGPV*ACRVEAVGHRT
Trigger: TGTGCGATGCCCAACAGCCTCCACTCTGCAAGCTCATACTGGGCCCTGCCCTCCATCGCCCCAGACAGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 72 bp CCCCACACAAATGTGAAGGAGACCAGCCCTCGTCTGTaGGCCTGTCTGGGGCGATGGAGGGCAGGGCCCAGT +
Preference number: 3 (lower is better)
Translates to: PHTNVKETSPRL*ACLGRWRAGPS
Trigger: ACTGGGCCCTGCCCTCCATCGCCCCAGACAGGCCCACAGACGAGGGCTGGTCTCCTTCACATTTGTGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGGCAGAGTGGAGGCTGTaGGGCATCGCACATGCCCTA +
Preference number: 3 (lower is better)
Translates to: DLPKATQRASGQARDRTQAEWRL*GIAHAL
Trigger: TAGGGCATGTGCGATGCCCAACAGCCTCCACTCTGC...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 72 bp AAACCGGTTCAGACTTGGTCATTGGTGGTGGCTCCATaGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: KPVQTWSLVVAP*HSHSIRAGSGA
Trigger: GGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR CCA 72 bp GATCCTCCTGAGAGAGTGTTCCTGAACCAGGAGACATaGCCTAGGCCTAGAGAGGGATGTCCCCAAAGGGGG +
Preference number: 3 (lower is better)
Translates to: DPPERVFLNQET*PRPREGCPQRG
Trigger: CCCCCTTTGGGGACATCCCTCTCTAGGCCTAGGCCATGTCTCCTGGTTCAGGAACACTCTCTCAGGAGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 72 bp CTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTaGGCACTTCGAGATCCTCCTGAGAGAGTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: LAPEWSYWSGLE*ALRDPPERVFL
Trigger: CAGGAACACTCTCTCAGGAGGATCTCGAAGTGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 72 bp AGATGCCCAGGACTCAAGTCACAAAGTCATGACCCATaGCGATCTCACCTCCACAGCAGGCCTGGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: RCPGLKSQSHDP*RSHLHSRPGGW
Trigger: CCAGCCTCCAGGCCTGCTGTGGAGGTGAGATCGCCATGGGTCATGACTTTGTGACTTGAGTCCTGGGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGCACATGCCCTAGCTTaGGGGCACAGGGATAGGGTT +
Preference number: 3 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLAHALA*GHRDRV
Trigger: AACCCTATCCCTGTGCCCCAAAGCTAGGGCATGTGC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACGTTCAGACTTGGTCATaGGTGGTGGCTCCATGGCAT +
Preference number: 3 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDVQTWS*VVAPWH
Trigger: ATGCCATGGAGCCACCACCAATGACCAAGTCTGAAC...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR GCA 72 bp TGGGGGCTGCATGCCTGGCAAGCACTCAGAGAAAACTaGCTGAGGACCCAACGGCCATTCCAGAGAATGTCT +
Preference number: 3 (lower is better)
Translates to: WGLHAWQALREN*LRTQRPFQRMS
Trigger: AGACATTCTCTGGAATGGCCGTTGGGTCCTCAGGCAGTTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR GCA 72 bp GCCTCACGCTGCTTAAAGTGGGCCTGCATGAAGGCGTaGACCTTTAGTTTGGTCCAGGCCACACCCTTCTTG +
Preference number: 3 (lower is better)
Translates to: ASRCLKWACMKA*TFSLVQATPFL
Trigger: CAAGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 72 bp GTGAAAAAGGCAGAAGTAAGGCCAGTCCAGCTGGGTTaGCTGACGTCATCTCTGAGGGCTCTGCCAGGTGGA +
Preference number: 3 (lower is better)
Translates to: VKKAEVRPVQLG*LTSSLRALPGG
Trigger: TCCACCTGGCAGAGCCCTCAGAGATGACGTCAGCCAACCCAGCTGGACTGGCCTTACTTCTGCCTTTTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 72 bp CAGGCTCCGGGGCCAGAGGCATTCAGTCAAAGCAGGTaGGAGGAGGGAAACACAAGCACACAGACTAGCAAA +
Preference number: 3 (lower is better)
Translates to: QAPGPEAFSQSR*EEGNTSTQTSK
Trigger: TTTGCTAGTCTGTGTGCTTGTGTTTCCCTCCTCCCACCTGCTTTGACTGAATGCCTCTGGCCCCGGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR GCA 72 bp TTCACCTCATCAGCCTCACGCTGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTTAGTTTGGTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: FTSSASRCLKWA*MKACTFSLVQA
Trigger: GGCCTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGAGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 72 bp CACCAAGACTTGCCTAGCCCTTCCTCGATGTTGACCTaGCAGCACTTGAACCGCTGGACACAACCTTCTGTG +
Preference number: 3 (lower is better)
Translates to: HQDLPSPSSMLT*QHLNRWTQPSV
Trigger: CACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCTAGGCAAGTCTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGAGCACATGGTGTACTaGGCGGGATCTTACAGCTCT +
Preference number: 3 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLEHMVY*AGSYSS
Trigger: AGAGCTGTAAGATCCCGCCAAGTACACCATGTGCTC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp GGGTTCCCACAATCTCCCTTAAAGCCACTCCCTGGGTGTTCCTTATCTAGGCTGAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAAC +
Preference number: 3 (lower is better)
Translates to: GFPQSPLKPLPGCSLSRLSPSSM*TWQHLN
Trigger: GTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCT...CAGCCTAGATAAGGAACACCCAGGGAGTGGCTTTAAGGGAGATTGTGGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CAA 90 bp CATTGGCAGATCCATAGCGATGAGCTCAATGGTATTGGGCTTGGGCACTCGGAGAGGGTACGAATCCCTTaGGCGCCTTTGATCAGACGC +
Preference number: 3 (lower is better)
Translates to: HWQIHSDELNGIGLGHSERVRIP*APLIRR
Trigger: GCGTCTGATCAAAGGCGCCAAAGGGATTCGTACCCT...CTCCGAGTGCCCAAGCCCAATACCATTGAGCTCATCGCTATGGATCTGCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR TCA 72 bp CCCCTCTGCAGAAGAGAGAGGTCAGTTCAGAATATCTaGACCCCTCGCGGTATCGACCCATGCCTGGAGAAA +
Preference number: 3 (lower is better)
Translates to: PLCRRERSVQNI*TPRGIDPCLEK
Trigger: TTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTCAGATATTCTGAACTGACCTCTCTCTTCTGCAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 72 bp TTACAGAAGATGCCCAGGACTCAAGTCACAAAGTCATaGCCCATGGCGATCTCACCTCCACAGCAGGCCTGG +
Preference number: 3 (lower is better)
Translates to: LQKMPRTQVTKS*PMAISPPQQAW
Trigger: CCAGGCCTGCTGTGGAGGTGAGATCGCCATGGGTCATGACTTTGTGACTTGAGTCCTGGGCATCTTCTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 72 bp AACTCATCCAGAGGCTTCACCTCATCAGCCTCACGCTaGTTAAAGTGGGCCTGCATGAAGGCGTGCACCTTT +
Preference number: 3 (lower is better)
Translates to: NSSRGFTSSASR*LKWACMKACTF
Trigger: AAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGAGGTGAAGCCTCTGGATGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR GCA 72 bp GGGCTTGGGCACTCGGAGAGGATGCTCCAAGGCATCTaGAAAGTCTGCCAGCTTACAGTACTCAATGAACTG +
Preference number: 3 (lower is better)
Translates to: GLGHSERMLQGI*KVCQLTVLNEL
Trigger: CAGTTCATTGAGTACTGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCCCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR GCA 72 bp AGCTCAATGGTATTGGGCTTGGGCACTCGGAGAGGATaGTCCAAGGCATCTGCAAAGTCTGCCAGCTTACAG +
Preference number: 3 (lower is better)
Translates to: SSMVLGLGTRRG*SKASAKSASLQ
Trigger: CTGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCCCAAGCCCAATACCATTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 72 bp AGAGGCTTCACCTCATCAGCCTCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGCACCTTTAGTTTGGTC +
Preference number: 3 (lower is better)
Translates to: RGFTSSASRCLK*ACMKACTFSLV
Trigger: GACCAAACTAAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGAGGTGAAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CAA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCAACTGCAGCATCTaGGCTTTGAAATCCAGTCAT +
Preference number: 3 (lower is better)
Translates to: DLPKATQRASGQARDRTQFNCSI*ALKSSH
Trigger: ATGACTGGATTTCAAAGCCAAGATGCTGCAGTTGAA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 72 bp GAAACTTCAAATACAGCGGAGGTGGCTTCTTTCCTATaGGGCTGGCTGATGGGTGCCAGATACCAAGGCCCA +
Preference number: 3 (lower is better)
Translates to: ETSNTAEVASFL*GWLMGARYQGP
Trigger: TGGGCCTTGGTATCTGGCACCCATCAGCCAGCCTCATAGGAAAGAAGCCACCTCCGCTGTATTTGAAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 72 bp GCCATTCTTCTGGAAGTCACCATTCCGGTGGATGTCTaGACCGGTGTGATTGGCGATACAGTTGGCCTTCTT +
Preference number: 3 (lower is better)
Translates to: AILLEVTIPVDV*TGVIGDTVGLL
Trigger: AAGAAGGCCAACTGTATCGCCAATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGAATGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 72 bp ATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTaGTGGCTCCATGGCATTCTCATTCCATCCGGGCAG +
Preference number: 3 (lower is better)
Translates to: MVVPNRFRLGHW*WLHGILIPSGQ
Trigger: CTGCCCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR CCA 72 bp GCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTaGTGGTGGCTCCATGGCATTCTCATTCCATCCGGG +
Preference number: 3 (lower is better)
Translates to: AMVVPNRFRLGH*WWLHGILIPSG
Trigger: CCCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR-3UTR CAA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGGTCTCTTTTCACTCTTaGTATAGAGACTTCCTGACA +
Preference number: 3 (lower is better)
Translates to: DLPKATQRASGQARDRTQVSFHS*YRDFLT
Trigger: TGTCAGGAAGTCTCTATACAAAGAGTGAAAAGAGAC...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGATAGAAAGCTCTGCTaGCCGACTTACTGTGGTTTG +
Preference number: 3 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLDRKLC*PTYCGL
Trigger: CAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGATCTTACAGCTCTGTaGCCCATCTCAAGACCTAAG +
Preference number: 3 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLDLTAL*PISRPK
Trigger: CTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGAATGAACGAAGCTTTTaGCTAAACTGTGGGCAACAT +
Preference number: 3 (lower is better)
Translates to: DLPKATQRASGQARDRTQNERSF*LNCGQH
Trigger: ATGTTGCCCACAGTTTAGCAAAAAGCTTCGTTCATT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp TGCACCGGTGTGATTGGCGATACAGTTGGCCTTCTTTTCATACAACTCATCCAGTCTGTGGCAGCCAGGTaGTCTGCACTGAAGGAGCTC +
Preference number: 3 (lower is better)
Translates to: CTGVIGDTVGLLFIQLIQSVAAR*SALKEL
Trigger: GAGCTCCTTCAGTGCAGACAACCTGGCTGCCACAGA...CTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR GCA 72 bp ATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTaGCCTTGGCAGGTCACTGCTCAAGATGCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: IRKSVSLGSGVL*PWQVTAQDAAV
Trigger: CACAGCTGCATCTTGAGCAGTGACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR CCA 72 bp GTCCCAATTCCCAGACCCCTCCCAGGACTCAAGAATTaGGATAGTCAAGCAACAAACACACCAAGACAGGCT +
Preference number: 3 (lower is better)
Translates to: VPIPRPLPGLKN*DSQATNTPRQA
Trigger: AGCCTGTCTTGGTGTGTTTGTTGCTTGACTATCCCAATTCTTGAGTCCTGGGAGGGGTCTGGGAATTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATCAAACCGGTTCAGACTaGGTCATTGGTGGTGGCTCC +
Preference number: 3 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDQTGSD*VIGGGS
Trigger: GGAGCCACCACCAATGACCAAGTCTGAACCGGTTTG...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR-3UTR CAA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACAAGCACATCTCATTCTaGCAGAGGAGACTTAGAACA +
Preference number: 3 (lower is better)
Translates to: LLASLTSPCLALLAHTSHKHISF*QRRLRT
Trigger: TGTTCTAAGTCTCCTCTGCAAGAATGAGATGTGCTT...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR TCA 72 bp TGGAAGTCACCATTCCGGTGGATGTCTGCACCGGTGTaGTTGGCGATACAGTTGGCCTTCTTTTCATACAAC +
Preference number: 3 (lower is better)
Translates to: WKSPFRWMSAPV*LAIQLAFFSYN
Trigger: GTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR TCA 72 bp TCAGACGCAAGATGCGCCCAATACGGGCCAATCGGATaGCTCGGAATAGGGTTGGGGAAACAAAGTATTTCT +
Preference number: 3 (lower is better)
Translates to: SDARCAQYGPIG*LGIGLGKQSIS
Trigger: AGAAATACTTTGTTTCCCCAACCCTATTCCGAGTCATCCGATTGGCCCGTATTGGGCGCATCTTGCGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 72 bp AGAATATCTGAACCCCTCGCGGTATCGACCCATGCCTaGAGAAAGCCACAATGCAGAGGACATGATACGAAA +
Preference number: 3 (lower is better)
Translates to: RISEPLAVSTHA*RKPQCRGHDTK
Trigger: TTTCGTATCATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTCAGATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 72 bp GGTGGATGTCTGCACCGGTGTGATTGGCGATACAGTTaGCCTTCTTTTCATACAACTCATCCAGAGGCTTCA +
Preference number: 3 (lower is better)
Translates to: GGCLHRCDWRYS*PSFHTTHPEAS
Trigger: TGAAGCCTCTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCAGACATCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CAA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGTGTCTGATTATGGGTaGGTTCTTCTTCCCCCTCTA +
Preference number: 3 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQVSDYG*VLLPPL
Trigger: TAGAGGGGGAAGAAGAACCAACCCATAATCAGACAC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGATGTCAGCTTCTGTTTaGTGCTGTTTACAATGTAGC +
Preference number: 3 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLMSASV*CCLQCS
Trigger: GCTACATTGTAAACAGCACAAAACAGAAGCTGACAT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR TCA 72 bp CGTGCACCTTTAGTTTGGTCCAGGCCACACCCTTCTTaGTACGGATCACTGAGATCTGGAGGTTGTTCATTT +
Preference number: 3 (lower is better)
Translates to: RAPLVWSRPHPS*YGSLRSGGCSF
Trigger: AAATGAACAACCTCCAGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR TCA 72 bp GCTCTGCTGGCACACACCTCCCACCCTGACATCACATaGGCATTCCTCTTTAGAAAAAGCACATCTCATTCT +
Preference number: 3 (lower is better)
Translates to: ALLAHTSHPDIT*AFLFRKSTSHS
Trigger: AGAATGAGATGTGCTTTTTCTAAAGAGGAATGCTCATGTGATGTCAGGGTGGGAGGTGTGTGCCAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR CCA 72 bp GCAAATCATTTCTACGCATTGAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAG +
Preference number: 3 (lower is better)
Translates to: ANHFYALNEHNV*NRPEQVLLSLK
Trigger: CTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR CCA 72 bp GTGCAAGGGACTAGATTAGTAGTGTCCTGTGGTGTATaGATCTCATGCATGACTTCTGATCACGGCATGCCA +
Preference number: 3 (lower is better)
Translates to: VQGTRLVVSCGV*ISCMTSDHGMP
Trigger: TGGCATGCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCTAGTCCCTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR CCA 72 bp AGTCACCATTCCGGTGGATGTCTGCACCGGTGTGATTaGCGATACAGTTGGCCTTCTTTTCATACAACTCAT +
Preference number: 3 (lower is better)
Translates to: SHHSGGCLHRCD*RYSWPSFHTTH
Trigger: ATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCAGACATCCACCGGAATGGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 72 bp TTCCTCAGGCTGTTCCACAGGGACCTCTTCTACTTCTaGTTTGATATCAATGGTGCTTCCTTCAGAGGAGCT +
Preference number: 3 (lower is better)
Translates to: FLRLFHRDLFYF*FDINGASFRGA
Trigger: AGCTCCTCTGAAGGAAGCACCATTGATATCAAACCAGAAGTAGAAGAGGTCCCTGTGGAACAGCCTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CCA 72 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTaGTCATTGGTGGTGGCTCCATGGCATTCTCATTCC +
Preference number: 3 (lower is better)
Translates to: KRSNGSSKPVQT*SLVVAPWHSHS
Trigger: GGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR-3UTR CAA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCACAGCTGTTCTGCATaGATAATATTCAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSHSCSA*IIFRKF
Trigger: AAACTTCCTGAATATTATCAATGCAGAACAGCTGTG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAAGAAACCAAGTGGGCTaGGTTCAGAGGCGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: LRKERGIITEDAQDSSHKRNQVG*VQRRLH
Trigger: ATGGAGCCGCCTCTGAACCAAGCCCACTTGGTTTCT...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAAACGGATCCATCTGCTaGTTGGATTGGGTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTNGSIC*LDWVCF
Trigger: AAAACAAACCCAATCCAACAAGCAGATGGATCCGTT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTAATAGTACAAGCCATTaGGGATCAAAGTCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPNSTSH*GSKSPP
Trigger: TGGGGGAGACTTTGATCCCAAATGGCTTGTACTATT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGTGTCTGATTATGGGTaGGTTCTTCTTCCCCCTCTA +
Preference number: 3 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFVSDYG*VLLPPL
Trigger: TAGAGGGGGAAGAAGAACCAACCCATAATCAGACAC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTGATAGAAAGCTCTGCTaGCCGACTTACTGTGGTTTG +
Preference number: 3 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFDRKLC*PTYCGL
Trigger: CAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATC...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCAAGACAGGCTTCCCTaGTACAGTAAAAAGGGTCAT +
Preference number: 3 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPQDRLP*YSKKGH
Trigger: ATGACCCTTTTTACTGTACAAGGGAAGCCTGTCTTG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCGCGTGCACCTTTAGTTaGGTCCAGGCCACACCCTTC +
Preference number: 3 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPACTFS*VQATPF
Trigger: GAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGC...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR TCA 72 bp TCACGGCATGCCATCATGCAAATCATTTCTACGCATTaGACGAGCACAATGTTTGGAATCGGCCTGAGCAAG +
Preference number: 3 (lower is better)
Translates to: SRHAIMQIISTH*TSTMFGIGLSK
Trigger: CTTGCTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATGATGGCATGCCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 72 bp AGTCTGGTATTGGGTGTAGTACAAAAATTCTACGGATaGTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAG +
Preference number: 3 (lower is better)
Translates to: SLVLGVVQKFYG*CCRSRLKRAGQ
Trigger: CTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTGTACTACACCCAATACCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 72 bp CTTAATGACATCACTAGCATGAGCACATGGTGTACTTaGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGA +
Preference number: 3 (lower is better)
Translates to: LNDITSMSTWCT*RDLTALLPISR
Trigger: TCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACCATGTGCTCATGCTAGTGATGTCATTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCACAGCTGTTCTGCATaGATAATATTCAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGHSCSA*IIFRKF
Trigger: AAACTTCCTGAATATTATCAATGCAGAACAGCTGTG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 72 bp GTTGCATTGACTGATGTGGAACATGCAGTAACCACCTaGCCAAGCATTAGAAAATCTGTAAGTCTAGGGAGC +
Preference number: 3 (lower is better)
Translates to: VALTDVEHAVTT*PSIRKSVSLGS
Trigger: GCTCCCTAGACTTACAGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 72 bp CTGGTATTGGGTGTAGTACAAAAATTCTACGGATGCTaGTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTT +
Preference number: 3 (lower is better)
Translates to: LVLGVVQKFYGC*CRSRLKRAGQF
Trigger: AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTGTACTACACCCAATACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTAACGGATCCATCTGCTaGTTGGATTGGGTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFNGSIC*LDWVCF
Trigger: AAAACAAACCCAATCCAACAAGCAGATGGATCCGTT...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTCAGGCCACACCCTTCTaGATACGGATCACTGAGATC +
Preference number: 3 (lower is better)
Translates to: FFHLISVLFPSISFSHSVQATPF*IRITEI
Trigger: GATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTG...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CAA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATACTCTTTAACTTCTCCTaGCCTGGCTCTGCTGGCACA +
Preference number: 3 (lower is better)
Translates to: TQRNTNSLNLLPISKTEILFNFS*PGSAGT
Trigger: TGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAG...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667214.1
3UTR TCA 72 bp CTGTATCTGGTTAGTTTTGTCCTAAGTTGCATTGACTaGTGTGGAACATGCAGTAACCACCTGCCCAAGCAT +
Preference number: 3 (lower is better)
Translates to: LYLVSFVLSCID*CGTCSNHLPKH
Trigger: ATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGCAACTTAGGACAAAACTAACCAGATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR TCA 72 bp TGGAGAAAGCCACAATGCAGAGGACATGATACGAAATaGAATGAGCACCCCATAACTCCCAATGAAAGGTCA +
Preference number: 3 (lower is better)
Translates to: WRKPQCRGHDTK*NEHPITPNERS
Trigger: TGACCTTTCATTGGGAGTTATGGGGTGCTCATTTCATTTCGTATCATGTCCTCTGCATTGTGGCTTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 72 bp ACTAGATTAGTAGTGTCCTGTGGTGTATGGATCTCATaGATGACTTCTGATCACGGCATGCCATCATGCAAA +
Preference number: 3 (lower is better)
Translates to: TRLVVSCGVWIS*MTSDHGMPSCK
Trigger: TTTGCATGATGGCATGCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 72 bp GTATTGGGTGTAGTACAAAAATTCTACGGATGCTGCTaGAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTA +
Preference number: 3 (lower is better)
Translates to: VLGVVQKFYGCC*RSRLKRAGQFL
Trigger: TAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTGTACTACACCCAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 72 bp TTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATaGACAAAAACGTCATCACTGATTCTTTCAGTTCGA +
Preference number: 3 (lower is better)
Translates to: LAKHCHLPTQRR*TKTSSLILSVR
Trigger: TCGAACTGAAAGAATCAGTGATGACGTTTTTGTGCATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 72 bp GGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTaGCCTTCCCTAGCGCCTTTGCCTCTGTATCTCAAA +
Preference number: 3 (lower is better)
Translates to: GTISASLSPIIL*PSLAPLPLYLK
Trigger: TTTGAGATACAGAGGCAAAGGCGCTAGGGAAGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCACAGCTGTTCTGCATaGATAATATTCAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPHSCSA*IIFRKF
Trigger: AAACTTCCTGAATATTATCAATGCAGAACAGCTGTG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAAATCATTTCTACGCATaGAACGAGCACAATGTTTGG +
Preference number: 3 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRNHFYA*NEHNVW
Trigger: CCAAACATTGTGCTCGTTCAATGCGTAGAAATGATT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCAATCATTTCTACGCATaGAACGAGCACAATGTTTGG +
Preference number: 3 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGNHFYA*NEHNVW
Trigger: CCAAACATTGTGCTCGTTCAATGCGTAGAAATGATT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR TCA 72 bp CAAAGCCTTTGGTGCCATTTTCAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAACACACTTGTTTCGAA +
Preference number: 3 (lower is better)
Translates to: QSLWCHFQDSSR*SLWATQHTCFE
Trigger: TTCGAAACAAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACCAAAGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR GCA 72 bp ATCTCATGCATGACTTCTGATCACGGCATGCCATCATaGAAATCATTTCTACGCATTGAACGAGCACAATGT +
Preference number: 3 (lower is better)
Translates to: ISCMTSDHGMPS*KSFLRIERAQC
Trigger: ACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATGATGGCATGCCGTGATCAGAAGTCATGCATGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR GCA 72 bp AAAGCTCTGCTTGCCGACTTACTGTGGTTTGTTCTATaGAAAACTAGTCTGGTGGACTGTGAAATTACCTTC +
Preference number: 3 (lower is better)
Translates to: KALLADLLWFVL*KTSLVDCEITF
Trigger: GAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCAGAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 72 bp GGACAGTTTCTAGTGGTCCAACAAGATAGAAAGCTCTaGTTGCCGACTTACTGTGGTTTGTTCTATGCAAAA +
Preference number: 3 (lower is better)
Translates to: GQFLVVQQDRKL*LPTYCGLFYAK
Trigger: TTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTGTTGGACCACTAGAAACTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCACAGCTGTTCTGCATaGATAATATTCAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQHSCSA*IIFRKF
Trigger: AAACTTCCTGAATATTATCAATGCAGAACAGCTGTG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR-3UTR CAA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGGTCTCTTTTCACTCTTaGTATAGAGACTTCCTGACA +
Preference number: 3 (lower is better)
Translates to: LASLIFGKALPLTHSAKMVSFHS*YRDFLT
Trigger: TGTCAGGAAGTCTCTATACAAAGAGTGAAAAGAGAC...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATATATCCTGCCCCAACATaGTCAAAGTTGATCTTCACG +
Preference number: 3 (lower is better)
Translates to: SKLIFTFFHLISVLFPSIYPAPT*SKLIFT
Trigger: CGTGAAGATCAACTTTGACAATGTTGGGGCAGGATA...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
3UTR-3UTR CAA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTACTGAGATCTGGAGGTaGTTCATTTCCCCATCGTCA +
Preference number: 3 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFTEIWR*FISPSS
Trigger: TGACGATGGGGAAATGAACAACCTCCAGATCTCAGT...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR-3UTR CAA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTGTTCAGACTTGGTCATaGGTGGTGGCTCCATGGCAT +
Preference number: 3 (lower is better)
Translates to: EVLERNRLTCYLKEFIPAVQTWS*VVAPWH
Trigger: ATGCCATGGAGCCACCACCAATGACCAAGTCTGAAC...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR-3UTR CAA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTCTCTTTAACTTCTCCTaGCCTGGCTCTGCTGGCACA +
Preference number: 3 (lower is better)
Translates to: EVLERNRLTCYLKEFIPALFNFS*PGSAGT
Trigger: TGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAG...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR TCA 72 bp ATATCTGTAGTAAGGGAGGTCACACACAGACACAAGTaGCAAACACAGACACAAACACAAACACCAAAGGAA +
Preference number: 3 (lower is better)
Translates to: ISVVREVTHRHK*QTQTQTQTPKE
Trigger: TTCCTTTGGTGTTTGTGTTTGTGTCTGTGTTTGTCACTTGTGTCTGTGTGTGACCTCCCTTACTACAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR GCA 72 bp GTTTTTCACACACAAACCAGCAACCATGTCAGCTGCTaGTCAGTGGCTTTGGCTCTGCATTTTAAATTATTA +
Preference number: 3 (lower is better)
Translates to: VFHTQTSNHVSC*SVALALHFKLL
Trigger: TAATAATTTAAAATGCAGAGCCAAAGCCACTGAGCAGCAGCTGACATGGTTGCTGGTTTGTGTGTGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR GCA 72 bp AATGTTTTTCACACACAAACCAGCAACCATGTCAGCTaGTGCTCAGTGGCTTTGGCTCTGCATTTTAAATTA +
Preference number: 3 (lower is better)
Translates to: NVFHTQTSNHVS*CSVALALHFKL
Trigger: TAATTTAAAATGCAGAGCCAAAGCCACTGAGCAGCAGCTGACATGGTTGCTGGTTTGTGTGTGAAAAACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CCA 72 bp CCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTaGTGGACTGTGAAATTACCTTCAAAGTGCTTCTAC +
Preference number: 3 (lower is better)
Translates to: PTYCGLFYAKLV*WTVKLPSKCFY
Trigger: GTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCACAGCTGTTCTGCATaGATAATATTCAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: HANHFYALNEHNVWNRPEHSCSA*IIFRKF
Trigger: AAACTTCCTGAATATTATCAATGCAGAACAGCTGTG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
3UTR TCA 72 bp TCAATTAGTTGGTTGTTTCCCTACCCAGAAGGTGTATaGAGGACTTTTAAGAACTCAAAGAATTGTAGCCGG +
Preference number: 3 (lower is better)
Translates to: SISWLFPYPEGV*RTFKNSKNCSR
Trigger: CCGGCTACAATTCTTTGAGTTCTTAAAAGTCCTTCATACACCTTCTGGGTAGGGAAACAACCAACTAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
3UTR TCA 72 bp AAAACATGCAGAATGCAAGGCCATTATCAACTGTACTaGTGCTGCTTTAGAATGGTGGACAAAACGAATGGA +
Preference number: 3 (lower is better)
Translates to: KTCRMQGHYQLY*CCFRMVDKTNG
Trigger: TCCATTCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCATTCTGCATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR TCA 72 bp CTAGTGAGACAGACAGCAGTAGAACATGATAGACAGTaGTTATTTAAGTGCAGTTCACTAACTCCAAGTCTC +
Preference number: 3 (lower is better)
Translates to: LVRQTAVEHDRQ*LFKCSSLTPSL
Trigger: GAGACTTGGAGTTAGTGAACTGCACTTAAATAATCACTGTCTATCATGTTCTACTGCTGTCTGTCTCACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR GCA 72 bp TCTATATATATATGTGCAGTGATACTGTGGCTGCGCTaGTCTTTGATTGGCTTCGTTAATATTTGGCAAAGC +
Preference number: 3 (lower is better)
Translates to: SIYICAVILWLR*SLIGFVNIWQS
Trigger: GCTTTGCCAAATATTAACGAAGCCAATCAAAGAGCAGCGCAGCCACAGTATCACTGCACATATATATATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCTATCCTGCCCCAACATaGTCAAAGTTGATCTTCACG +
Preference number: 3 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSYPAPT*SKLIFT
Trigger: CGTGAAGATCAACTTTGACAATGTTGGGGCAGGATA...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
3UTR-3UTR CAA 90 bp TTCTTCGGTCATGAAGATGTCCTGACCTCCGAACTTTTTCTTTTGTTGATTGAATCTTCTACTTCTGGTTaGATATCAATGGTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: FFGHEDVLTSELFLLLIESSTSG*ISMVLP
Trigger: AGGAAGCACCATTGATATCAAACCAGAAGTAGAAGA...TTCAATCAACAAAAGAAAAAGTTCGGAGGTCAGGACATCTTCATGACCGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR TCA 72 bp CTAAAGTCTCTTTTCACTCTTTGTATAGAGACTTCCTaGCACATTCAACTGCAGCATCTTGGCTTTGAAATC +
Preference number: 3 (lower is better)
Translates to: LKSLFTLCIETS*HIQLQHLGFEI
Trigger: GATTTCAAAGCCAAGATGCTGCAGTTGAATGTGTCAGGAAGTCTCTATACAAAGAGTGAAAAGAGACTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR-3UTR CAA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACAATCATTTCTACGCATaGAACGAGCACAATGTTTGG +
Preference number: 3 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYNHFYA*NEHNVW
Trigger: CCAAACATTGTGCTCGTTCAATGCGTAGAAATGATT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAGACAGGTCAGCTCCCTaGAGGGCGCGCCCGCTCGCC +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSDRSAP*RARPLA
Trigger: GGCGAGCGGGCGCGCCCTGCAGGGAGCTGACCTGTC...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATGGGCCCGGATGGGGATaGAGAGGGAGTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHGPGWG*RGSPGG
Trigger: GCCGCCGGGACTCCCTCTTCATCCCCATCCGGGCCC...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATAGCCGGGGCCGCCGATaGGGGACACCACGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHSRGRR*GTPRRC
Trigger: GCAACGGCGTGGTGTCCCTCATCGGCGGCCCCGGCT...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATCCAGGACAGGTCAGCTaGCAGCGGCGGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHPGQVS*QRRRRG
Trigger: CCCTCGCCGCCGCCGCTGCCAGCTGACCTGTCCTGG...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAGTCTGTGGGCCTGTCTaGGGCGATGGAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAVCGPV*GDGGQG
Trigger: GCCCTGCCCTCCATCGCCCCAGACAGGCCCACAGAC...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CAA 72 bp TGTCTGGGGCGATGGAGGGCAGGGCCCAGTATGAGCTaGCAGAGTGGAGGCTGTTGGGCATCGCACATGCCC +
Preference number: 4 (lower is better)
Translates to: CLGRWRAGPSMS*QSGGCWASHMP
Trigger: GGGCATGTGCGATGCCCAACAGCCTCCACTCTGCAAGCTCATACTGGGCCCTGCCCTCCATCGCCCCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACAGACGCCCGCCGATGTaGGAGCCGGGGCCGCCGATG +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHRRPPM*EPGPPM
Trigger: CATCGGCGGCCCCGGCTCCCACATCGGCGGGCGTCT...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAGACAGCCTGCTGGGCTaGGGTCAGGAGCTAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWADSLLG*GQELAE
Trigger: CTCCGCTAGCTCCTGACCCCAGCCCAGCAGGCTGTC...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCACGCTCTCCTCCACCGTaGTGTGCTCGTCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSRSPPP*CARHPR
Trigger: TCGCGGATGACGAGCACAGCACGGTGGAGGAGAGCG...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCATGTTGCGCTTCACGCTaGGCCGCAGGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSCCASR*AAGWGR
Trigger: TCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACA...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCAAAGGCGCCGAGGATaGGGCGGGCGGGACTGCGGT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSQRRRG*GGRDCG
Trigger: ACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
3UTR CAA 72 bp GGCAGGGCCCAGTATGAGCTTGCAGAGTGGAGGCTGTaGGGCATCGCACATGCCCTAGCTTTGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GRAQYELAEWRL*GIAHALALGHR
Trigger: CCTGTGCCCCAAAGCTAGGGCATGTGCGATGCCCAACAGCCTCCACTCTGCAAGCTCATACTGGGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGGGCCCGGATGGGGATaGAGAGGGAGTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGGPGWG*RGSPGG
Trigger: GCCGCCGGGACTCCCTCTTCATCCCCATCCGGGCCC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACCGCTCTCCTCCACCGTaGTGTGCTCGTCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDRSPPP*CARHPR
Trigger: TCGCGGATGACGAGCACAGCACGGTGGAGGAGAGCG...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAAGTCCACCGTGCTGTTaGGCTTCACGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQSPPCC*ASRCAA
Trigger: TGCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACT...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGACAGGTCAGCTCCCTaGAGGGCGCGCCCGCTCGCC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGDRSAP*RARPLA
Trigger: GGCGAGCGGGCGCGCCCTGCAGGGAGCTGACCTGTC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662684.1
CDS-3UTR CCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACACTATCAGGGCCTGGTaGTGCAAGCAGCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDTIRAW*CKQPRC
Trigger: GCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGT...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAGAAACTATCAGGGCCTaGTGGTGCAAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAETIRA*WCKQPR
Trigger: GCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTC...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGAGACGCCCGCCGATGTaGGAGCCGGGGCCGCCGATG +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWRRPPM*EPGPPM
Trigger: CATCGGCGGCCCCGGCTCCCACATCGGCGGGCGTCT...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTAGACGCCCGCCGATGTaGGAGCCGGGGCCGCCGATG +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGRRPPM*EPGPPM
Trigger: CATCGGCGGCCCCGGCTCCCACATCGGCGGGCGTCT...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACTCAGTTGTAGCCTCTaGCAGGAGACGCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWALSCSL*QETPAD
Trigger: ATCGGCGGGCGTCTCCTGCCAGAGGCTACAACTGAG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCTGAGGACCCAACGGCCATTCCAGAGAATGTCTCCCAGGAAAAACATGCAGAACCAGGACAGGTCAGCTaGCAGCGGCGGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: PEDPTAIPENVSQEKHAEPGQVS*QRRRRG
Trigger: CCCTCGCCGCCGCCGCTGCCAGCTGACCTGTCCTGG...TTCTGCATGTTTTTCCTGGGAGACATTCTCTGGAATGGCCGTTGGGTCCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCCAGGACAGGTCAGCTaGCAGCGGCGGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGPGQVS*QRRRRG
Trigger: CCCTCGCCGCCGCCGCTGCCAGCTGACCTGTCCTGG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR TCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCATCATCGTCCTCCCGATaGCTGCCATCGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSSSSSR*LPSAFG
Trigger: ACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGA...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGACCCCCACACAAATGTaGAGGAGACCAGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQTPTQM*RRPALV
Trigger: GACGAGGGCTGGTCTCCTTCACATTTGTGTGGGGGT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAACGTTGCAGTCCACCGTaGTGTTGCGCTTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQRCSPP*CCASRC
Trigger: GCAGCGTGAAGCGCAACAGCACGGTGGACTGCAACG...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGACTTCTCCACGCTGCTaGCAATGCCGCTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQTSPRC*QCRWLC
Trigger: GCACAACCAGCGGCATTGGCAGCAGCGTGGAGAAGT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTGCGGCGGGCGGGACTaGGGTGGGCGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVCGGRD*GGRHLG
Trigger: TCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGAGGCGCGGCCGGACTaGAAAGGCGCCGAGGATGCG +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVEARPD*KGAEDA
Trigger: CGCATCCTCGGCGCCTTTGCAGTCCGGCCGCGCCTC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAGACGCCCGCCGATGTaGGAGCCGGGGCCGCCGATG +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKRRPPM*EPGPPM
Trigger: CATCGGCGGCCCCGGCTCCCACATCGGCGGGCGTCT...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGCCTGTCTGGGGCGATaGAGGGCAGGGCCCAGTATG +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLACLGR*RAGPSM
Trigger: CATACTGGGCCCTGCCCTCCATCGCCCCAGACAGGC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGGGCCCGGATGGGGATaGAGAGGGAGTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYGPGWG*RGSPGG
Trigger: GCCGCCGGGACTCCCTCTTCATCCCCATCCGGGCCC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATAGCCGGGGCCGCCGATaGGGGACACCACGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYSRGRR*GTPRRC
Trigger: GCAACGGCGTGGTGTCCCTCATCGGCGGCCCCGGCT...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTAGCCGGGGCCGCCGATaGGGGACACCACGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFSRGRR*GTPRRC
Trigger: GCAACGGCGTGGTGTCCCTCATCGGCGGCCCCGGCT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GGCATTCACCACCACCCTCGCCCTTTACAGTCTCTGCAGGTCCCAGAAGTCCCCATGTCTGCACCGGTGTaGTTGGCGATACAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GIHHHPRPLQSLQVPEVPMSAPV*LAIQLA
Trigger: GGCCAACTGTATCGCCAATCACACCGGTGCAGACAT...GGGGACTTCTGGGACCTGCAGAGACTGTAAAGGGCGAGGGTGGTGGTGAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548086.3
CDS-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAGAGCCATGCAGTGTGTaGGTATGCGATGACCCCTCT +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAEPCSV*VCDDPS
Trigger: AGAGGGGTCATCGCATACTCACACACTGCATGGCTC...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCATCCTATGAGGCTGGCTaGTGGGTGCCAGATACCAAG +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWASYEAG*WVPDTK
Trigger: CTTGGTATCTGGCACCCATCAGCCAGCCTCATAGGA...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAGAGAGAGTGAGTGAGTaGGCAGGTGGAAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAERVSE*AGGRTV
Trigger: CACTGTCCTTCCACCTGCTCACTCACTCACTCTCTC...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACCGTCCTCCCGATGACTaGCATCGGCCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDRPPDD*HRPLVV
Trigger: AACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTGTTGCGCTTCACGCTaGGCCGCAGGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCCCASR*AAGWGR
Trigger: TCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGTGTTGCGCTTCACGCTaGGCCGCAGGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLCCASR*AAGWGR
Trigger: TCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACA...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCAGTCCACCGTGCTGTTaGGCTTCACGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSSPPCC*ASRCAA
Trigger: TGCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTCAATAGCATGGATGGAATGGGGGCTGCATGCCTGGCAAGCACTCAGAGAAAATGCGGCGGGCGGGACTaGGGTGGGCGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: FNSMDGMGAACLASTQRKCGGRD*GGRHLG
Trigger: TCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCA...TTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCATTCCATCCATGCTATTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp TTCAATAGCATGGATGGAATGGGGGCTGCATGCCTGGCAAGCACTCAGAGAAAACAAAGGCGCCGAGGATaGGGCGGGCGGGACTGCGGT +
Preference number: 4 (lower is better)
Translates to: FNSMDGMGAACLASTQRKQRRRG*GGRDCG
Trigger: ACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTG...TTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCATTCCATCCATGCTATTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGAGGCGCGGCCGGACTaGAAAGGCGCCGAGGATGCG +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKEARPD*KGAEDA
Trigger: CGCATCCTCGGCGCCTTTGCAGTCCGGCCGCGCCTC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCTGGCTGCAAGGGAATaGACTGAGGGAAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQLAARE*TEGSWN
Trigger: GTTCCAGCTTCCCTCAGTGCATTCCCTTGCAGCCAG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCTCCTTGCCTGGCTCTaGTGGCACACACCTCCCACC +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHLLAWL*WHTPPT
Trigger: GGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAG...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAACGCTGCGCCGCAGGCTaGGGAAGATGCGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQRCAAG*GRCARS
Trigger: GCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCG...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCCAGGACAGGTCAGCTaGCAGCGGCGGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPPGQVS*QRRRRG
Trigger: CCCTCGCCGCCGCCGCTGCCAGCTGACCTGTCCTGG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGGAAACCAAGTGGGCTTaGTTCAGAGGCGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQETKWA*FRGGSI
Trigger: GATGGAGCCGCCTCTGAACCAAGCCCACTTGGTTTC...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGTCTGTGGGCCTGTCTaGGGCGATGGAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGVCGPV*GDGGQG
Trigger: GCCCTGCCCTCCATCGCCCCAGACAGGCCCACAGAC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATTCATCGTCCTCCCGATaGCTGCCATCGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHSSSSR*LPSAFG
Trigger: ACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGA...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCATTCGAAGGTTCCCCATaGACAGCTGCAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSFEGSP*TAAVRS
Trigger: TGATCGGACTGCAGCTGTTCATGGGGAACCTTCGAA...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATGGGCCCGGATGGGGATaGAGAGGGAGTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDGPGWG*RGSPGG
Trigger: GCCGCCGGGACTCCCTCTTCATCCCCATCCGGGCCC...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATAGCCGGGGCCGCCGATaGGGGACACCACGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNSRGRR*GTPRRC
Trigger: GCAACGGCGTGGTGTCCCTCATCGGCGGCCCCGGCT...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCATGCAAGGGAATGCACTaGGGGAAGCTGGAACATCCT +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWACKGMH*GKLEHP
Trigger: AGGATGTTCCAGCTTCCCTCAGTGCATTCCCTTGCA...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACTGTTTGGCTTGGGCTTaGTGTCCTCATCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDCLAWA*CPHRPP
Trigger: GGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACA...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGTCCTCCAGGGGAACTaGAACCAGGCCTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSVLQGN*NQALGD
Trigger: ATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGAC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGCGTTGCAGTCCACCGTaGTGTTGCGCTTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLRCSPP*CCASRC
Trigger: GCAGCGTGAAGCGCAACAGCACGGTGGACTGCAACG...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCCACGCTGCTGCCAATaGCGCTGGTTGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSPRCCQ*RWLCHC
Trigger: GCAATGGCACAACCAGCGGCATTGGCAGCAGCGTGG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCCTTCTTCCTTCCTCTaGCCGCTGCTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQPSSFL*PLLFLL
Trigger: AAGGAGAAACAGCAGCGGGCAGAGGAAGGAAGAAGG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCACCCTATTCTGTTGTCTaGCAGCCGAAAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSPYSVV*QPKGLP
Trigger: AGGAAGGCCTTTCGGCTGCCAGACAACAGAATAGGG...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTCGCTGCGCCGCAGGCTaGGGAAGATGCGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVARCAAG*GRCARS
Trigger: GCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCG...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGAGACGCCCGCCGATGTaGGAGCCGGGGCCGCCGATG +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVRRPPM*EPGPPM
Trigger: CATCGGCGGCCCCGGCTCCCACATCGGCGGGCGTCT...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCAGACGCCCGCCGATGTaGGAGCCGGGGCCGCCGATG +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGRRPPM*EPGPPM
Trigger: CATCGGCGGCCCCGGCTCCCACATCGGCGGGCGTCT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCATGCTGCCAATGCCGCTaGTTGTGCCATTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWACCQCR*LCHCHS
Trigger: AGAATGGCAATGGCACAACCAGCGGCATTGGCAGCA...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGCATTCACCACCACCCTCGCCCTTTACAGTCTCTGCAGGTCCCAGAAGTCCCCTGCTGCCAATGCCGCTaGTTGTGCCATTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: GIHHHPRPLQSLQVPEVPCCQCR*LCHCHS
Trigger: AGAATGGCAATGGCACAACCAGCGGCATTGGCAGCA...GGGGACTTCTGGGACCTGCAGAGACTGTAAAGGGCGAGGGTGGTGGTGAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548086.3
CDS-3UTR CCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGACCAGGACAGGTCAGCTaGCAGCGGCGGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRPGQVS*QRRRRG
Trigger: CCCTCGCCGCCGCCGCTGCCAGCTGACCTGTCCTGG...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGACAGCCTGCTGGGCTaGGGTCAGGAGCTAGCGGAG +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGDSLLG*GQELAE
Trigger: CTCCGCTAGCTCCTGACCCCAGCCCAGCAGGCTGTC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGACCTCCACAGCAGGCCTaGAGGCTGGGGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRPPQQA*RLGAEG
Trigger: CCCCTCGGCCCCCAGCCTCCAGGCCTGCTGTGGAGG...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGCCTCCACAGCAGGCCTaGAGGCTGGGGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVPPQQA*RLGAEG
Trigger: CCCCTCGGCCCCCAGCCTCCAGGCCTGCTGTGGAGG...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCAAAGTCATGACCCATaGCGATCTCACCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQQSHDP*RSHLHS
Trigger: GCTGTGGAGGTGAGATCGCCATGGGTCATGACTTTG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAATCAATTTTCACCTCTaGCAGGAGACGCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSINFHL*QETPAD
Trigger: ATCGGCGGGCGTCTCCTGCCAGAGGTGAAAATTGAT...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACTCCAGACAGACCAAGTaGGATGGGCAGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDSRQTK*DGQSRE
Trigger: TTCCCTGCTCTGCCCATCCCACTTGGTCTGTCTGGA...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACTCAATGTTTGCCAGTaGCTCAGGGGTGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWALNVCQ*LRGERL
Trigger: AAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCACCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSPLVVS*ACSQQC
Trigger: GCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGG...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGGGCCCGGATGGGGATaGAGAGGGAGTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIGPGWG*RGSPGG
Trigger: GCCGCCGGGACTCCCTCTTCATCCCCATCCGGGCCC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGGGCCCGGATGGGGATaGAGAGGGAGTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTGPGWG*RGSPGG
Trigger: GCCGCCGGGACTCCCTCTTCATCCCCATCCGGGCCC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAAGCCGGGGCCGCCGATaGGGGACACCACGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTSRGRR*GTPRRC
Trigger: GCAACGGCGTGGTGTCCCTCATCGGCGGCCCCGGCT...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GGCATTCACCACCACCCTCGCCCTTTACAGTCTCTGCAGGTCCCAGAAGTCCCCAGGCCACACCCTTCTTaGTACGGATCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: GIHHHPRPLQSLQVPEVPRPHPS*YGSLRS
Trigger: AGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCT...GGGGACTTCTGGGACCTGCAGAGACTGTAAAGGGCGAGGGTGGTGGTGAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548086.3
CDS-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCATCTCCAAACCACGTaGAGCCCATGTGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQHLQTT*SPCGED
Trigger: ATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGCTTCCTCTTCTCTCCTaGTGTCCCCCTGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLLPLLS*CPPGWQ
Trigger: TTGCCAGCCAGGGGGACATCAGGAGAGAAGAGGAAG...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGAACAAGTCGAGGAGGTaGGGGAAGGAGATACAGCAA +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQNKSRR*GKEIQQ
Trigger: TTGCTGTATCTCCTTCCCTCACCTCCTCGACTTGTT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTGCTTTCATACACTGGTATCCCTCTGGGCATTGCCCAGCATCAGAACTGTTCCATCAGGGCCTGGTGGTaGAAGCAGCCGCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LLSYTGIPLGIAQHQNCSIRAWW*KQPRCH
Trigger: ATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGAT...GGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCGTCCTCCCGATGACTaGCATCGGCCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHRPPDD*HRPLVV
Trigger: AACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCGCTCTCCTCCACCGTaGTGTGCTCGTCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPRSPPP*CARHPR
Trigger: TCGCGGATGACGAGCACAGCACGGTGGAGGAGAGCG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCGCTCTCCTCCACCGTaGTGTGCTCGTCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVRSPPP*CARHPR
Trigger: TCGCGGATGACGAGCACAGCACGGTGGAGGAGAGCG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTGTTGCGCTTCACGCTaGGCCGCAGGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVCCASR*AAGWGR
Trigger: TCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGGGACACCACGCCGTTaGAGTCCACCGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVGTPRR*SPPCCC
Trigger: GCAACAGCACGGTGGACTGCAACGGCGTGGTGTCCC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGGGGACACCACGCCGTTaGAGTCCACCGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWGTPRR*SPPCCC
Trigger: GCAACAGCACGGTGGACTGCAACGGCGTGGTGTCCC...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp GGCATTCACCACCACCCTCGCCCTTTACAGTCTCTGCAGGTCCCAGAAGTCCCCCGCTGGTTGTGCCATTaGCATTCTTCTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: GIHHHPRPLQSLQVPEVPRWLCH*HSSGSH
Trigger: GTGACTTCCAGAAGAATGGCAATGGCACAACCAGCG...GGGGACTTCTGGGACCTGCAGAGACTGTAAAGGGCGAGGGTGGTGGTGAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548086.3
CDS-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCGCTGGTTGTGCCATTaGCATTCTTCTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQRWLCH*HSSGSH
Trigger: GTGACTTCCAGAAGAATGGCAATGGCACAACCAGCG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGCATTCACCACCACCCTCGCCCTTTACAGTCTCTGCAGGTCCCAGAAGTCCCCCCAGCCTTTGAAGGTTaGTACTTGAAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GIHHHPRPLQSLQVPEVPPAFEG*YLKKGQ
Trigger: CTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGG...GGGGACTTCTGGGACCTGCAGAGACTGTAAAGGGCGAGGGTGGTGGTGAATGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000548086.3
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCGCTCTTCCATCTGCTaGCGCAGGATGTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSRSSIC*RRMSNS
Trigger: GGAGTTGGACATCCTGCGGCAGCAGATGGAAGAGCG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTGCGGCGGGCGGGACTaGGGTGGGCGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQCGGRD*GGRHLG
Trigger: TCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCAAAGGCGCCGAGGATaGGGCGGGCGGGACTGCGGT +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFQRRRG*GGRDCG
Trigger: ACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGAGGCGCGGCCGGACTaGAAAGGCGCCGAGGATGCG +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQEARPD*KGAEDA
Trigger: CGCATCCTCGGCGCCTTTGCAGTCCGGCCGCGCCTC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTGCAAGCAGCCGCGCTaGCATCTTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSCKQPR*HLLILQ
Trigger: CTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATCCCTGGCTGGCAAGTTaGAGCCAATTCTTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHPWLAS*SQFFRG
Trigger: CCCCCTAAAGAATTGGCTGCAACTTGCCAGCCAGGG...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACACACTGGTATCCCTCTaGGCATTGCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDTLVSL*ALPSIR
Trigger: TCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGT...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCGCTGCGCCGCAGGCTaGGGAAGATGCGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNRCAAG*GRCARS
Trigger: GCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCGCTGCGCCGCAGGCTaGGGAAGATGCGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQRCAAG*GRCARS
Trigger: GCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCGCTGCGCCGCAGGCTaGGGAAGATGCGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGRCAAG*GRCARS
Trigger: GCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGGGGGCGGTTTAGGATaGGCAGCAGCAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQGGGLG*AAAGHP
Trigger: GGGATGGCCTGCTGCTGCCCATCCTAAACCGCCCCC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGACGGGCGGGACTGCGGTaGGCGCCATCTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRRAGLR*APSWSA
Trigger: AGCGCTCCAAGATGGCGCCCACCGCAGTCCCGCCCG...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATCGGGCGGGACTGCGGTaGGCGCCATCTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: QNCSHRVKVPACQELCRNRAGLR*APSWSA
Trigger: AGCGCTCCAAGATGGCGCCCACCGCAGTCCCGCCCG...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAAGCACATGGTGTACTTaGCGGGATCTTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWASTWCT*RDLTAL
Trigger: CAGAGCTGTAAGATCCCGCCAAGTACACCATGTGCT...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGCCAGTCCAGCTGGGTTaGCTGACGTCATCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLPVQLG*LTSSLR
Trigger: CCTCAGAGATGACGTCAGCCAACCCAGCTGGACTGG...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTGTCTGTGGGCCTGTCTaGGGCGATGGAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPVCGPV*GDGGQG
Trigger: GCCCTGCCCTCCATCGCCCCAGACAGGCCCACAGAC...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCCGAGGGGAGGAGGATaGGGACTGACCTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGPRGGG*GLTYQP
Trigger: TGGCTGGTAGGTCAGTCCCCATCCTCCTCCCCTCGG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTCCTCCACAGCAGGCCTaGAGGCTGGGGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSPPQQA*RLGAEG
Trigger: CCCCTCGGCCCCCAGCCTCCAGGCCTGCTGTGGAGG...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCTCCTGATGTCCCCCTaGCTGGCAAGTTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSLLMSP*LASCSQ
Trigger: TTGGCTGCAACTTGCCAGCCAGGGGGACATCAGGAG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAGAACACAGAAATGGCTaGGGTGTTAACAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSEHRNG*GVNRSG
Trigger: CCCACTCCTGTTAACACCCCAGCCATTTCTGTGTTC...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACTTGGTGGTGGCTCCATaGCATTCTCATTCCATCCGG +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDLVVAP*HSHSIR
Trigger: CCGGATGGAATGAGAATGCCATGGAGCCACCACCAA...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAGACTTGGTCATTGGTaGTGGCTCCATGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSRLGHW*WLHGIL
Trigger: GAGAATGCCATGGAGCCACCACCAATGACCAAGTCT...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAGAGGTTTTGCCATGTTaGCCAGCCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSEVLPC*PAWSQT
Trigger: AGTTTGAGACCAGGCTGGCCAACATGGCAAAACCTC...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR TCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACCTCAATGTTTGCCAGTaGCTCAGGGGTGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDLNVCQ*LRGERL
Trigger: AAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAG...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATGGATGTCCCCGTAGATaGAAGGCAAACTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHGCPRR*KANSSL
Trigger: CAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCC...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAGCCCAGGGCACCCACTaGATTTCCAATAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAAQGTH*ISNNLD
Trigger: ATCAAGATTATTGGAAATTCAGTGGGTGCCCTGGGC...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGATGTCTGCACCGGTGTaGTTGGCGATACAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLMSAPV*LAIQLA
Trigger: GGCCAACTGTATCGCCAATCACACCGGTGCAGACAT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGAAGAAGATGCCCACTaGGGGGTTCCCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSEEDAH*GVPTIS
Trigger: GGAGATTGTGGGAACCCCTCAGTGGGCATCTTCTTC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTGTTTGGAATCGGCCTaGGCAAGTCCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSCLESA*ASPPQP
Trigger: AGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAACA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGGGCAGGGCCCAGTATaGGCTTGCAGAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQGQGPV*ACRVEA
Trigger: AGCCTCCACTCTGCAAGCTCATACTGGGCCCTGCCC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGGGCAGGGCCCAGTATaGGCTTGCAGAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKGQGPV*ACRVEA
Trigger: AGCCTCCACTCTGCAAGCTCATACTGGGCCCTGCCC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAAGGAGAAGACAGGGTaGGTAATAGGGGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSKEKTG*VIGGKL
Trigger: CAGTTTTCCCCCTATTACTCACCCTGTCTTCTCCTT...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTGTTTGGCTTGGGCTTaGTGTCCTCATCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSCLAWA*CPHRPP
Trigger: GGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGGTCCTCCAGGGGAACTaGAACCAGGCCTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWVLQGN*NQALGD
Trigger: ATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGAC...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGTCCTCCAGGGGAACTaGAACCAGGCCTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGVLQGN*NQALGD
Trigger: ATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGAC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACTATCCCTCTGGGCATTaGCCAGCATCAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDYPSGH*PASELF
Trigger: GAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATA...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGGGACACCACGCCGTTaGAGTCCACCGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKGTPRR*SPPCCC
Trigger: GCAACAGCACGGTGGACTGCAACGGCGTGGTGTCCC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATTCATCAGCCTCACGCTaGTTAAAGTGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHSSASR*LKWACM
Trigger: CATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGA...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGTGTACTTCTCCACGCTaGTGCCAATGCCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLCTSPR*CQCRWL
Trigger: CAACCAGCGGCATTGGCAGCAGCGTGGAGAAGTACA...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGAACCGCTCTTCCATCTaGTGCCGCAGGATGTCCAAC +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLNRSSI*CRRMSN
Trigger: GTTGGACATCCTGCGGCAGCAGATGGAAGAGCGGTT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCGCAGATACCTCCTCCTaGTTGCGACGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCADTSS*LRRSVV
Trigger: AACCACACTGCGTCGCAAGCAGGAGGAGGTATCTGC...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGCAGATACCTCCTCCTaGTTGCGACGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLADTSS*LRRSVV
Trigger: AACCACACTGCGTCGCAAGCAGGAGGAGGTATCTGC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCACGCTGCAGGACCACTaGAGATACCTCCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSTLQDH*RYLLLL
Trigger: AAGCAGGAGGAGGTATCTGCAGTGGTCCTGCAGCGT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGATGAAGCCCCGCCTTaGCAAATGTCCCCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGDEAPP*QMSPVG
Trigger: GCCTACCGGGGACATTTGGCAAGGCGGGGCTTCATC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGATGAAGCCCCGCCTTaGCAAATGTCCCCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPDEAPP*QMSPVG
Trigger: GCCTACCGGGGACATTTGGCAAGGCGGGGCTTCATC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTTTCTCCCGGTGTGTaGCTCCATTCTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQFSPGV*LHSPAY
Trigger: ATAAGCTGGAGAATGGAGGCACACACCGGGAGAAAA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTGCGGCGGGCGGGACTaGGGTGGGCGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSCGGRD*GGRHLG
Trigger: TCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATGCGGCGGGCGGGACTaGGGTGGGCGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTCGGRD*GGRHLG
Trigger: TCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCAAAGGCGCCGAGGATaGGGCGGGCGGGACTGCGGT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEQRRRG*GGRDCG
Trigger: ACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR GCA 90 bp GGTGCCATTTTCAAGATAGCTCTCGTTGAAGTTTATGGGCCACACAACACACTTGAGGCGCGGCCGGACTaGAAAGGCGCCGAGGATGCG +
Preference number: 4 (lower is better)
Translates to: GAIFKIALVEVYGPHNTLEARPD*KGAEDA
Trigger: CGCATCCTCGGCGCCTTTGCAGTCCGGCCGCGCCTC...AAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCGCAACGGATCCATCTaGTTGTTGGATTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQRNGSI*LLDWVC
Trigger: ACAAACCCAATCCAACAAGCAGATGGATCCGTTGCG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCGCGGTATCGACCCATaGCTGGAGAAAGCCACAATG +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSRGIDP*LEKATM
Trigger: CATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCATCAAAGTGCTTCTACTaGAAGGCAGATCGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWASKCFY*KADRCV
Trigger: GACACACCGATCTGCCTTGCAGTAGAAGCACTTTGA...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCAAGGAAGAGGAAGCGTaGCCCCACCCCCACACAAAT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSKEEEA*PHPHTN
Trigger: ATTTGTGTGGGGGTGGGGGCACGCTTCCTCTTCCTT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAACTATCAGGGCCTGGTaGTGCAAGCAGCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTTIRAW*CKQPRC
Trigger: GCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGAAACTATCAGGGCCTaGTGGTGCAAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGETIRA*WCKQPR
Trigger: GCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACGGTCGCTGTTTGGCTTaGGCTTGCTGTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHGRCLA*ACCPHR
Trigger: ACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACC...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCTCAGTTGTAGCCTCTaGCAGGAGACGCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGLSCSL*QETPAD
Trigger: ATCGGCGGGCGTCTCCTGCCAGAGGCTACAACTGAG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACGGATCACTGAGATCTaGAGGTTGTTCATTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWARITEI*RLFISP
Trigger: TGGGGAAATGAACAACCTCCAGATCTCAGTGATCCG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GTCCATCCAGCCTTTGAAGGTTGCTACTTGAAGAAGGGCCAGGTATCCTGCCCCTCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: VHPAFEGCYLKKGQVSCPSRCLK*ACMKAC
Trigger: GCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGA...GGGGCAGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGCGGGCGGGACTGCGGTaGGCGCCATCTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMRAGLR*APSWSA
Trigger: AGCGCTCCAAGATGGCGCCCACCGCAGTCCCGCCCG...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCGGGCGGGACTGCGGTaGGCGCCATCTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPERAGLR*APSWSA
Trigger: AGCGCTCCAAGATGGCGCCCACCGCAGTCCCGCCCG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGGTCTCCCCCATGTACTaGACACAGAGCAGCATTAAA +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQVSPMY*TQSSIK
Trigger: TTTAATGCTGCTCTGTGTCCAGTACATGGGGGAGAC...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCCTCACCCACCTCTGTaGGCAAGGGAAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKPHPPL*AREALL
Trigger: GAGCAGGGCTTCCCTTGCCCACAGAGGTGGGTGAGG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCCATCTCGCTCCAGAGTaGAGCTACTGGAGCGGACTA +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCHLAPE*SYWSGL
Trigger: TAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATG...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAAAACCGGTTCAGACTTaGTCATTGGTGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQKPVQT*SLVVAP
Trigger: TGGAGCCACCACCAATGACCAAGTCTGAACCGGTTT...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAGTAGCCTTAAACTCTTaGGCTCATGTGATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQVALNS*AHVIPL
Trigger: CAGGGGGATCACATGAGCCCAAGAGTTTAAGGCTAC...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667214.1
3UTR CAA 72 bp TTCTCCACGCTGCTGCCAATGCCGCTGGTTGTGCCATaGCCATTCTTCTGGAAGTCACCATTCCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: FSTLLPMPLVVP*PFFWKSPFRWM
Trigger: CATCCACCGGAATGGTGACTTCCAGAAGAATGGCAATGGCACAACCAGCGGCATTGGCAGCAGCGTGGAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 72 bp TTGCCTAGCCCTTCCTCGATGTTGACCTGGCAGCACTaGAACCGCTGGACACAACCTTCTGTGAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPSPSSMLTWQH*NRWTQPSVKQA
Trigger: TGCCTGCTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCTAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 72 bp AGGATCCACCAAGACTTGCCTAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAACCGCTGGACACAACCT +
Preference number: 4 (lower is better)
Translates to: RIHQDLPSPSSM*TWQHLNRWTQP
Trigger: AGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATAAGCCCTCAGTACCCTaGAAGTGCGTAGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHKPSVP*KCVELK
Trigger: TTTCAGCTCTACGCACTTTCAGGGTACTGAGGGCTT...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354534.11
ENST00000545061.5
CDS-3UTR TCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCATGGGATGCTGAGCAGTaGCTGATTCATGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSWDAEQ*LIHDGK
Trigger: TTTTCCATCATGAATCAGTCACTGCTCAGCATCCCA...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp CATTGCCATTCTTCTGGAAGTCACCATTCCGGTGGATGTCTGCACCGGTGTGATGAAAGATCGCAGCACTaGAAGCCCCTCCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: HCHSSGSHHSGGCLHRCDERSQH*KPLHVC
Trigger: GCAGACGTGGAGGGGCTTTCAGTGCTGCGATCTTTC...ATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGAATGGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGAAAGATCGCAGCACTaGAAGCCCCTCCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGERSQH*KPLHVC
Trigger: GCAGACGTGGAGGGGCTTTCAGTGCTGCGATCTTTC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACTTGATACGGATCACTaGGATCTGGAGGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWALDTDH*DLEVVH
Trigger: ATGAACAACCTCCAGATCTCAGTGATCCGTATCAAG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCGGACACAACCTTCTGTaGAGCAGGCATCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCGHNLL*SRHLDP
Trigger: TGGATCCAGATGCCTGCTTCACAGAAGGTTGTGTCC...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGGACACAACCTTCTGTaGAGCAGGCATCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSGHNLL*SRHLDP
Trigger: TGGATCCAGATGCCTGCTTCACAGAAGGTTGTGTCC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTACGGGCCAATCGGATaGCTCGGAATAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVYGPIG*LGIGLG
Trigger: CCCCAACCCTATTCCGAGTCATCCGATTGGCCCGTA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATCTCATGCATGACTTCTaGTCACGGCATGCCATCATG +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHLMHDF*SRHAIM
Trigger: CATGATGGCATGCCGTGATCAGAAGTCATGCATGAG...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTTTCTCCAAATACAGTaGACGGTGCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCFLQIQ*TVQGWV
Trigger: GACCCAGCCCTGCACCGTTCACTGTATTTGGAGAAA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGTGCAAGGGAATGCACTaGGGGAAGCTGGAACATCCT +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLCKGMH*GKLEHP
Trigger: AGGATGTTCCAGCTTCCCTCAGTGCATTCCCTTGCA...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGTGGCTTCTTTCCTATaGGGCTGGCTGATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPVASFL*GWLMGA
Trigger: GGCACCCATCAGCCAGCCTCATAGGAAAGAAGCCAC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCACAGAGAGGTTAAGTaGCTTGCCCAAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSHREVK*LAQGHT
Trigger: TGTGTGGCCTTGGGCAAGTCACTTAACCTCTCTGTG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACAAGGAGAAGACAGGGTaGGTAATAGGGGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDKEKTG*VIGGKL
Trigger: CAGTTTTCCCCCTATTACTCACCCTGTCTTCTCCTT...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTATCAGGGCCTGGTGGTaGAAGCAGCCGCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAIRAWW*KQPRCH
Trigger: ATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGAT...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TTCAATAGCATGGATGGAATGGGGGCTGCATGCCTGGCAAGCACTCAGAGAAAAGTCCTCCAGGGGAACTaGAACCAGGCCTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: FNSMDGMGAACLASTQRKVLQGN*NQALGD
Trigger: ATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGAC...TTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCATTCCATCCATGCTATTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAATTCCCCATGAACAGCTaGAGTCCGATCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQFPMNS*SPIKAK
Trigger: TTTTGCCTTGATCGGACTGCAGCTGTTCATGGGGAA...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACGTTGGGGTTCCTTCCTaGTTTCATACACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDVGVPS*FHTLVS
Trigger: GGATACCAGTGTATGAAAGCAGGAAGGAACCCCAAC...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCATGTGCCTCTTCCTGTTaGTTCTTAAGTTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSCASSC*FLSCSN
Trigger: GTTGGAGCAACTTAAGAAGCAACAGGAAGAGGCACA...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTCCTCCACCGTGCTGTaGTCGTCATCCGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGSSTVL*SSSANS
Trigger: TGAGTTCGCGGATGACGAGCACAGCACGGTGGAGGA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGTCCTCCACCGTGCTGTaGTCGTCATCCGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWSSTVL*SSSANS
Trigger: TGAGTTCGCGGATGACGAGCACAGCACGGTGGAGGA...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTCCTCCACCGTGCTGTaGTCGTCATCCGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPSSTVL*SSSANS
Trigger: TGAGTTCGCGGATGACGAGCACAGCACGGTGGAGGA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTGTTGCGCTTCACGCTaGGCCGCAGGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFCCASR*AAGWGR
Trigger: TCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTGGGACACCACGCCGTTaGAGTCCACCGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAGTPRR*SPPCCC
Trigger: GCAACAGCACGGTGGACTGCAACGGCGTGGTGTCCC...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGGATCCACCAAGACTTaGCTAGCCCTTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLGSTKT*LALPRC
Trigger: ACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCAACCATGTCAGCTGCTaGTCAGTGGCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSNHVSC*SVALAL
Trigger: CAGAGCCAAAGCCACTGAGCAGCAGCTGACATGGTT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGAACCATGTCAGCTGCTaGTCAGTGGCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLNHVSC*SVALAL
Trigger: CAGAGCCAAAGCCACTGAGCAGCAGCTGACATGGTT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACCTCCTCTCGTCCTCTaGTTTAAATTACAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAPPLVL*FKLQSL
Trigger: GAGACTCTGTAATTTAAAGCAGAGGACGAGAGGAGG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGCCAGTAGTGGGGAATaGCACATGCAATGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLASSGE*HMQWVS
Trigger: ACTCACCCATTGCATGTGGCATTCCCCACTACTGGC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACGCTGCGCCGCAGGCTaGGGAAGATGCGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKRCAAG*GRCARS
Trigger: GCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GTCCATCCAGCCTTTGAAGGTTGCTACTTGAAGAAGGGCCAGGTATCCTGCCCCCTGCACCGGTGTGATTaGCGATACAGTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VHPAFEGCYLKKGQVSCPLHRCD*RYSWPS
Trigger: AGAAGGCCAACTGTATCGCCAATCACACCGGTGCAG...GGGGCAGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCTGCACCGGTGTGATTaGCGATACAGTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSLHRCD*RYSWPS
Trigger: AGAAGGCCAACTGTATCGCCAATCACACCGGTGCAG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCACTCGCCCACAGCAATaGGTACCCGTACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSTRPQQ*VPVQSS
Trigger: ACTTGACTGTACGGGTACCCATTGCTGTGGGCGAGT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAGGGGGCGGTTTAGGATaGGCAGCAGCAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRGGGLG*AAAGHP
Trigger: GGGATGGCCTGCTGCTGCCCATCCTAAACCGCCCCC...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCATCCCCGCTCACCATTaGCAGATCCATAGCGATGAG +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSIPAHH*QIHSDE
Trigger: CTCATCGCTATGGATCTGCCAATGGTGAGCGGGGAT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGATCCCCGCTCACCATTaGCAGATCCATAGCGATGAG +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLIPAHH*QIHSDE
Trigger: CTCATCGCTATGGATCTGCCAATGGTGAGCGGGGAT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCCTCACCCACCTCTGTaGGCAAGGGAAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYPHPPL*AREALL
Trigger: GAGCAGGGCTTCCCTTGCCCACAGAGGTGGGTGAGG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGCCTGTCTGGGGCGATaGAGGGCAGGGCCCAGTATG +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNACLGR*RAGPSM
Trigger: CATACTGGGCCCTGCCCTCCATCGCCCCAGACAGGC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCTCCTGATGTCCCCCTaGCTGGCAAGTTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGLLMSP*LASCSQ
Trigger: TTGGCTGCAACTTGCCAGCCAGGGGGACATCAGGAG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACATCAATTTTCACCTCTaGCAGGAGACGCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHINFHL*QETPAD
Trigger: ATCGGCGGGCGTCTCCTGCCAGAGGTGAAAATTGAT...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCCCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCPLVVS*ACSQQC
Trigger: GCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGG...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATCATCGTCCTCCCGATaGCTGCCATCGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQSSSSR*LPSAFG
Trigger: ACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCAAGCCCTCAGTACCCTaGAAGTGCGTAGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSKPSVP*KCVELK
Trigger: TTTCAGCTCTACGCACTTTCAGGGTACTGAGGGCTT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354534.11
ENST00000545061.5
CDS-3UTR TCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACAAGCCCTCAGTACCCTaGAAGTGCGTAGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHKPSVP*KCVELK
Trigger: TTTCAGCTCTACGCACTTTCAGGGTACTGAGGGCTT...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR TCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAACAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAA +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQQDSSR*SLWATQ
Trigger: TTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTG...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp GGGTTCCCACAATCTCCCTTAAAGCCACTCCCTGGGTGTTCCTTATCTAGGCTGGGCGGGCACTTTCTCTaGGACTCTTCCAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GFPQSPLKPLPGCSLSRLGGHFL*DSSSSS
Trigger: AGAAGAACTGGAAGAGTCTCAGAGAAAGTGCCCGCC...CAGCCTAGATAAGGAACACCCAGGGAGTGGCTTTAAGGGAGATTGTGGGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGGTGGCACTCCCAGATaGGGAAAGTGTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLGGTPR*GKCWQI
Trigger: AATTTGCCAACACTTTCCTCATCTGGGAGTGCCACC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTGTGGTCCTCATCAATaGTGTACTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSCGPHQ*CTSPRC
Trigger: GCAGCGTGGAGAAGTACATCATTGATGAGGACCACA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATTTGAAGGTTGCTACTTaGAGAAGGGCCAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHLKVAT*RRARYP
Trigger: AGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAA...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGTACGGGCCAATCGGATaGCTCGGAATAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKYGPIG*LGIGLG
Trigger: CCCCAACCCTATTCCGAGTCATCCGATTGGCCCGTA...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAACTCAGTGGAGAAATGTaGTGGAGGCAGGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQLSGEM*WRQGEP
Trigger: TGGCTCCCCCTGCCTCCATCACATTTCTCCACTGAG...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCTTCCTCTTCTCTCCTaGTGTCCCCCTGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKLPLLS*CPPGWQ
Trigger: TTGCCAGCCAGGGGGACATCAGGAGAGAAGAGGAAG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGAACCCCAGAAGCAAGTaGAAGGAAAGACATTTTCTC +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQNPRSK*KERHFL
Trigger: GAGAAAATGTCTTTCCTTTCACTTGCTTCTGGGGTT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCACACCCTGACATCACATaGGCATTCCTCTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSHPDIT*AFLFRK
Trigger: TTTTCTAAAGAGGAATGCTCATGTGATGTCAGGGTG...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAACTCTGTCACTCAGGCTaGAATGTAGTGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQLCHSG*NVVIIA
Trigger: AGCTATGATCACTACATTTCAGCCTGAGTGACAGAG...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR GCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCGTCCTCCCGATGACTaGCATCGGCCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKRPPDD*HRPLVV
Trigger: AACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTGTCCTCCAGGGGAACTaGAACCAGGCCTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPVLQGN*NQALGD
Trigger: ATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGAC...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTGTCCTCCAGGGGAACTaGAACCAGGCCTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAVLQGN*NQALGD
Trigger: ATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGAC...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGTATCCCTCTGGGCATTaGCCAGCATCAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLYPSGH*PASELF
Trigger: GAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATA...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACTATCCCTCTGGGCATTaGCCAGCATCAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHYPSGH*PASELF
Trigger: GAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATA...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATGTTGCGCTTCACGCTaGGCCGCAGGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRCCASR*AAGWGR
Trigger: TCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCAGTCCACCGTGCTGTTaGGCTTCACGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGSPPCC*ASRCAA
Trigger: TGCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATAGTCCACCGTGCTGTTaGGCTTCACGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDSPPCC*ASRCAA
Trigger: TGCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACT...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSCLKWA*MKACTF
Trigger: AAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCGCTGGTTGTGCCATTaGCATTCTTCTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSRWLCH*HSSGSH
Trigger: GTGACTTCCAGAAGAATGGCAATGGCACAACCAGCG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCAATGCCGCTGGTTGTaGCATTGCCATTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSQCRWL*HCHSSG
Trigger: TCCAGAAGAATGGCAATGGCACAACCAGCGGCATTG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCACGCTGCTGCCAATaGCGCTGGTTGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFPRCCQ*RWLCHC
Trigger: GCAATGGCACAACCAGCGGCATTGGCAGCAGCGTGG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTGTACTTCTCCACGCTaGTGCCAATGCCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGCTSPR*CQCRWL
Trigger: CAACCAGCGGCATTGGCAGCAGCGTGGAGAAGTACA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCCAGCCTTTGAAGGTTaGTACTTGAAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSPAFEG*YLKKGQ
Trigger: CTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTCCTCATACTTAGGCTaGTCATCAGGCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSSSYLG*SSGFRE
Trigger: TTCCCGGAAGCCTGATGAGCAGCCTAAGTATGAGGA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGGCACTCGGAGAGGATaGTCCAAGGCATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVGTRRG*SKASAK
Trigger: CTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTGTCCAAGCAGTGGATaGGATCCCCGCTCACCATTG +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGCPSSG*DPRSPL
Trigger: CAATGGTGAGCGGGGATCGCATCCACTGCTTGGACA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACACGCTCTTCCATCTGCTaGCGCAGGATGTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTRSSIC*RRMSNS
Trigger: GGAGTTGGACATCCTGCGGCAGCAGATGGAAGAGCG...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCGCTCTTCCATCTGCTaGCGCAGGATGTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKRSSIC*RRMSNS
Trigger: GGAGTTGGACATCCTGCGGCAGCAGATGGAAGAGCG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCAACCGCTCTTCCATCTaGTGCCGCAGGATGTCCAAC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPNRSSI*CRRMSN
Trigger: GTTGGACATCCTGCGGCAGCAGATGGAAGAGCGGTT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCACGCTGCAGGACCACTaGAGATACCTCCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPTLQDH*RYLLLL
Trigger: AAGCAGGAGGAGGTATCTGCAGTGGTCCTGCAGCGT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGGGAGCGGGGTCCTTTaGCCTTGGCAGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFGSGVL*PWQVTA
Trigger: AGCAGTGACCTGCCAAGGGCAAAGGACCCCGCTCCC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGCTGCAACGGAAATATaGTGGTCCCGGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKAATEI*WSRQPL
Trigger: GAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAGC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATCGCAACGGATCCATCTaGTTGTTGGATTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHRNGSI*LLDWVC
Trigger: ACAAACCCAATCCAACAAGCAGATGGATCCGTTGCG...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCCTGACACATTCAACTaGAGCATCTTGGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQPDTFN*SILALK
Trigger: TTTCAAAGCCAAGATGCTGCAGTTGAATGTGTCAGG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACTGTGGTTTGTTCTATaGAAAACTAGTCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWALWFVL*KTSLVD
Trigger: GTCCACCAGACTAGTTTTGCATAGAACAAACCACAG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTCGATGCCTGTTAACTaGGGGTGTAAACTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSSMPVN*GCKLLV
Trigger: CACCAGCAGTTTACACCCGCAGTTAACAGGCATCGA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAACTGTCATCGGTAGCTaGCTTATCAATTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSTVIGS*LINFHL
Trigger: GAGGTGAAAATTGATAAGGCAGCTACCGATGACAGT...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAACTATCAGGGCCTGGTaGTGCAAGCAGCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRTIRAW*CKQPRC
Trigger: GCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GATGCTGCTTTAGAATGGTGGACAAAACGAATGGAGGAGAAAGAGGAGATGTGGACTATCAGGGCCTGGTaGTGCAAGCAGCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: DAALEWWTKRMEEKEEMWTIRAW*CKQPRC
Trigger: GCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGT...CCACATCTCCTCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSTAIGL*WFLELA
Trigger: AGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGGTCGCTGTTTGGCTTaGGCTTGCTGTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGGRCLA*ACCPHR
Trigger: ACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CTGCTTTCATACACTGGTATCCCTCTGGGCATTGCCCAGCATCAGAACTGTTCCGGTCGCTGTTTGGCTTaGGCTTGCTGTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LLSYTGIPLGIAQHQNCSGRCLA*ACCPHR
Trigger: ACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACC...GGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTTCCAGGTCGCTGTTTaGCTTGGGCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVFQVAV*LGLAVL
Trigger: GAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCTCAGTTGTAGCCTCTaGCAGGAGACGCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPLSCSL*QETPAD
Trigger: ATCGGCGGGCGTCTCCTGCCAGAGGCTACAACTGAG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAGACATGTTCAAATTGTaGTGTCATAGGATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWADMFKL*CHRMVL
Trigger: GAGCACCATCCTATGACACCACAATTTGAACATGTC...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CATTGGCAGATCCATAGCGATGAGCTCAATGGTATTGGGCTTGGGCACTCGGAGCGTGCACCTTTAGTTTaGTCCAGGCCACACCCTTCT +
Preference number: 4 (lower is better)
Translates to: HWQIHSDELNGIGLGHSERAPLV*SRPHPS
Trigger: AGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACG...CTCCGAGTGCCCAAGCCCAATACCATTGAGCTCATCGCTATGGATCTGCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVSRCLK*ACMKAC
Trigger: GCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TACAACTCATCCAGAGGCTTCACCTCATCAGCCTCACGCTGCTTAAAGTGGGCCTGCTGCCAATGCCGCTaGTTGTGCCATTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: YNSSRGFTSSASRCLKWACCQCR*LCHCHS
Trigger: AGAATGGCAATGGCACAACCAGCGGCATTGGCAGCA...GGCCCACTTTAAGCAGCGTGAGGCTGATGAGGTGAAGCCTCTGGATGAGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CCA 90 bp GTCCATCCAGCCTTTGAAGGTTGCTACTTGAAGAAGGGCCAGGTATCCTGCCCCCAGCACTTGAACCGCTaGACACAACCTTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VHPAFEGCYLKKGQVSCPQHLNR*TQPSVK
Trigger: CTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTG...GGGGCAGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGGGGGCGGTTTAGGATaGGCAGCAGCAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIGGGLG*AAAGHP
Trigger: GGGATGGCCTGCTGCTGCCCATCCTAAACCGCCCCC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAAGGATGTCCAAGCAGTaGATGCGATCCCCGCTCACC +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQRMSKQ*MRSPLT
Trigger: GGTGAGCGGGGATCGCATCCACTGCTTGGACATCCT...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAAGGATGTCCAAGCAGTaGATGCGATCCCCGCTCACC +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTRMSKQ*MRSPLT
Trigger: GGTGAGCGGGGATCGCATCCACTGCTTGGACATCCT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGAAACCAAGTGGGCTTaGTTCAGAGGCGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPETKWA*FRGGSI
Trigger: GATGGAGCCGCCTCTGAACCAAGCCCACTTGGTTTC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCCAGGACTCAAGAATTaGGATAGTCAAGCAACAAAC +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQPGLKN*DSQATN
Trigger: GTTTGTTGCTTGACTATCCCAATTCTTGAGTCCTGG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCATCTCGCTCCAGAGTaGAGCTACTGGAGCGGACTA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPHLAPE*SYWSGL
Trigger: TAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCATCTCGCTCCAGAGTaGAGCTACTGGAGCGGACTA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGHLAPE*SYWSGL
Trigger: TAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCCGAGGGGAGGAGGATaGGGACTGACCTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFPRGGG*GLTYQP
Trigger: TGGCTGGTAGGTCAGTCCCCATCCTCCTCCCCTCGG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCTCTGTTGCAAAACTTaGGCCCCTCCCAACCCAGAC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVLCCKT*APPNPD
Trigger: GTCTGGGTTGGGAGGGGCCCAAGTTTTGCAACAGAG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGTCCAGACAGACCAAGTaGGATGGGCAGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWSRQTK*DGQSRE
Trigger: TTCCCTGCTCTGCCCATCCCACTTGGTCTGTCTGGA...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACAAACCGGTTCAGACTTaGTCATTGGTGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHKPVQT*SLVVAP
Trigger: TGGAGCCACCACCAATGACCAAGTCTGAACCGGTTT...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACCTGGTCTCCAACTCCTaGTTTCATGTGATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDLVSNS*FHVILF
Trigger: AAAGAGGATCACATGAAACCAGGAGTTGGAGACCAG...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR TCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGATGTATAAATCCCTGTaGACGTGTACTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQMYKSL*TCTPHS
Trigger: AGAATGTGGAGTACACGTTCACAGGGATTTATACAT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTTCGAAGGTTCCCCATaGACAGCTGCAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPFEGSP*TAAVRS
Trigger: TGATCGGACTGCAGCTGTTCATGGGGAACCTTCGAA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATCAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAA +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHQDSSR*SLWATQ
Trigger: TTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTG...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAAAGAACCCACAAAGATaGCCAAGACGAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQKNPQR*PRRRRS
Trigger: TGATCTTCTTCGTCTTGGTCATCTTTGTGGGTTCTT...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACGCAGTGACTGATTCATaGTGGAAAATTTCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDAVTDS*WKISSL
Trigger: TAGGGAGGAAATTTTCCATCATGAATCAGTCACTGC...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTGGGCCCGGATGGGGATaGAGAGGGAGTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLGPGWG*RGSPGG
Trigger: GCCGCCGGGACTCCCTCTTCATCCCCATCCGGGCCC...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTAGCCGGGGCCGCCGATaGGGGACACCACGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLSRGRR*GTPRRC
Trigger: GCAACGGCGTGGTGTCCCTCATCGGCGGCCCCGGCT...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGGCGGGCACTTTCTCTaGGACTCTTCCAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGGGHFL*DSSSSS
Trigger: AGAAGAACTGGAAGAGTCTCAGAGAAAGTGCCCGCC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGAAAGATCGCAGCACTaGAAGCCCCTCCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYERSQH*KPLHVC
Trigger: GCAGACGTGGAGGGGCTTTCAGTGCTGCGATCTTTC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTGAAAGATCGCAGCACTaGAAGCCCCTCCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPERSQH*KPLHVC
Trigger: GCAGACGTGGAGGGGCTTTCAGTGCTGCGATCTTTC...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGCCCAGGGCACCCACTaGATTTCCAATAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSAQGTH*ISNNLD
Trigger: ATCAAGATTATTGGAAATTCAGTGGGTGCCCTGGGC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAATGTCTGCACCGGTGTaGTTGGCGATACAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQMSAPV*LAIQLA
Trigger: GGCCAACTGTATCGCCAATCACACCGGTGCAGACAT...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGGACACAACCTTCTGTaGAGCAGGCATCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVGHNLL*SRHLDP
Trigger: TGGATCCAGATGCCTGCTTCACAGAAGGTTGTGTCC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGCTTACAGTACTCAATaGACTGGGTGGCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPAYSTQ*TGWHRG
Trigger: ACCCCGATGCCACCCAGTTCATTGAGTACTGTAAGC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTTTCTCCAAATACAGTaGACGGTGCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPFLQIQ*TVQGWV
Trigger: GACCCAGCCCTGCACCGTTCACTGTATTTGGAGAAA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCTCAGTGGAGAAATGTaGTGGAGGCAGGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYLSGEM*WRQGEP
Trigger: TGGCTCCCCCTGCCTCCATCACATTTCTCCACTGAG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGCAGATCGGTGTGTCTaGTTATGGGTTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSADRCV*LWVGSS
Trigger: AGAAGAACCAACCCATAATCAGACACACCGATCTGC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATGGGATGTACATTGGCTaGCAGCATCTAAGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHGMYIG*QHLSSK
Trigger: CTTAGAACTTAGATGCTGTCAGCCAATGTACATCCC...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATAGGCCCATGTGTTACTaGGGAGACAGCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNRPMCY*GDSLLG
Trigger: GCCCAGCAGGCTGTCTCCTCAGTAACACATGGGCCT...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTGTGGCTTCTTTCCTATaGGGCTGGCTGATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFVASFL*GWLMGA
Trigger: GGCACCCATCAGCCAGCCTCATAGGAAAGAAGCCAC...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGTGGAAGGACAGTGGGTaGAGGATAAAAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLWKDSG*RIKRWE
Trigger: TTCCCACCTTTTTATCCTTCACCCACTGTCCTTCCA...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTACCCCCACACAAATGTaGAGGAGACCAGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPTPTQM*RRPALV
Trigger: GACGAGGGCTGGTCTCCTTCACATTTGTGTGGGGGT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTACTCTTGGGCTCATGTaGTCCCCCTGCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVATLGLM*SPCLSI
Trigger: GATGCTGAGGCAGGGGGATCACATGAGCCCAAGAGT...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTATCAGGGCCTGGTGGTaGAAGCAGCCGCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIIRAWW*KQPRCH
Trigger: ATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGAT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCGTCCTCCCGATGACTaGCATCGGCCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPRPPDD*HRPLVV
Trigger: AACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGTCCTCCAGGGGAACTaGAACCAGGCCTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGVLQGN*NQALGD
Trigger: ATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGAC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGCATCGCAGCAGCCTGTaGCTCTTCCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWHRSSL*LFLLLL
Trigger: AAGAAGCAACAGGAAGAGGCACAGGCTGCTGCGATG...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCATCGCAGCAGCCTGTaGCTCTTCCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPHRSSL*LFLLLL
Trigger: AAGAAGCAACAGGAAGAGGCACAGGCTGCTGCGATG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCATCGCAGCAGCCTGTaGCTCTTCCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVHRSSL*LFLLLL
Trigger: AAGAAGCAACAGGAAGAGGCACAGGCTGCTGCGATG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTCGCTCTCCTCCACCGTaGTGTGCTCGTCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSRSPPP*CARHPR
Trigger: TCGCGGATGACGAGCACAGCACGGTGGAGGAGAGCG...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCGCTCTCCTCCACCGTaGTGTGCTCGTCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPERSPPP*CARHPR
Trigger: TCGCGGATGACGAGCACAGCACGGTGGAGGAGAGCG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCGTTGCAGTCCACCGTaGTGTTGCGCTTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFRCSPP*CCASRC
Trigger: GCAGCGTGAAGCGCAACAGCACGGTGGACTGCAACG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGGGACACCACGCCGTTaGAGTCCACCGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTGTPRR*SPPCCC
Trigger: GCAACAGCACGGTGGACTGCAACGGCGTGGTGTCCC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGGGACACCACGCCGTTaGAGTCCACCGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSGTPRR*SPPCCC
Trigger: GCAACAGCACGGTGGACTGCAACGGCGTGGTGTCCC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGGGACACCACGCCGTTaGAGTCCACCGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEGTPRR*SPPCCC
Trigger: GCAACAGCACGGTGGACTGCAACGGCGTGGTGTCCC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCATTCCGGTGGATGTCTaGACCGGTGTGATTGGCGAT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPIPVDV*TGVIGD
Trigger: ATCGCCAATCACACCGGTGCAGACATCCACCGGAAT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATTGGCAGATCCATAGCGATGAGCTCAATGGTATTGGGCTTGGGCACTCGGAGCGCTGGTTGTGCCATTaGCATTCTTCTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: HWQIHSDELNGIGLGHSERWLCH*HSSGSH
Trigger: GTGACTTCCAGAAGAATGGCAATGGCACAACCAGCG...CTCCGAGTGCCCAAGCCCAATACCATTGAGCTCATCGCTATGGATCTGCCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGCCACGCTGCTGCCAATaGCGCTGGTTGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVPRCCQ*RWLCHC
Trigger: GCAATGGCACAACCAGCGGCATTGGCAGCAGCGTGG...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCCTAGTTTATCTTTGCTaGCTTCAGGATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCLVYLC*LQDPTR
Trigger: GCGAGTCGGATCCTGAAGGCAGCAAAGATAAACTAG...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCTAGTTTATCTTTGCTaGCTTCAGGATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSLVYLC*LQDPTR
Trigger: GCGAGTCGGATCCTGAAGGCAGCAAAGATAAACTAG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATTGCCATTCTTCTGGAAGTCACCATTCCGGTGGATGTCTGCACCGGTGTGATGGATCCACCAAGACTTaGCTAGCCCTTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: HCHSSGSHHSGGCLHRCDGSTKT*LALPRC
Trigger: ACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCC...ATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGAATGGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTTACAAAGAAGAAGATaGCCACTGAGGGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCLQRRR*PLRGSH
Trigger: GTGGGAACCCCTCAGTGGGCATCTTCTTCTTTGTAA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTTACAAAGAAGAAGATaGCCACTGAGGGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSLQRRR*PLRGSH
Trigger: GTGGGAACCCCTCAGTGGGCATCTTCTTCTTTGTAA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATGGCATCTGCAAAGTCTaGCAGCTTACAGTACTCAAT +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHGICKV*QLTVLN
Trigger: ATTGAGTACTGTAAGCTGGCAGACTTTGCAGATGCC...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGGCACTCGGAGAGGATaGTCCAAGGCATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQGTRRG*SKASAK
Trigger: CTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGATGAAGCCCCGCCTTaGCAAATGTCCCCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNDEAPP*QMSPVG
Trigger: GCCTACCGGGGACATTTGGCAAGGCGGGGCTTCATC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGATGAAGCCCCGCCTTaGCAAATGTCCCCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFDEAPP*QMSPVG
Trigger: GCCTACCGGGGACATTTGGCAAGGCGGGGCTTCATC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCAAAGGCGCCGAGGATaGGGCGGGCGGGACTGCGGT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFQRRRG*GGRDCG
Trigger: ACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTGCAAGCAGCCGCGCTaGCATCTTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYCKQPR*HLLILQ
Trigger: CTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTGCAAGCAGCCGCGCTaGCATCTTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFCKQPR*HLLILQ
Trigger: CTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTTGCAAGCAGCCGCGCTaGCATCTTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVACKQPR*HLLILQ
Trigger: CTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCA...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGGGAGCGGGGTCCTTTaGCCTTGGCAGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIGSGVL*PWQVTA
Trigger: AGCAGTGACCTGCCAAGGGCAAAGGACCCCGCTCCC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGGGAGCGGGGTCCTTTaGCCTTGGCAGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEGSGVL*PWQVTA
Trigger: AGCAGTGACCTGCCAAGGGCAAAGGACCCCGCTCCC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCAAATACAGTGAACGGTaGAGGGCTGGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPKYSER*RAGSCP
Trigger: TGGACAGGACCCAGCCCTGCACCGTTCACTGTATTT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCAAATACAGTGAACGGTaGAGGGCTGGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVKYSER*RAGSCP
Trigger: TGGACAGGACCCAGCCCTGCACCGTTCACTGTATTT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGGGCAAGGGAAGCCCTaGTCAGTGGAGAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGGQGKP*SVEKCD
Trigger: ATCACATTTCTCCACTGAGCAGGGCTTCCCTTGCCC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGTTCTACGGATGCTGCTaGAGAAGCAGGCTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLFYGCC*RSRLKR
Trigger: TCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAA...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCCCCACTCAGCGAAGATaGACAAAAACGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCPTQRR*TKTSSL
Trigger: CAGTGATGACGTTTTTGTGCATCTTCGCTGAGTGGG...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATTATTTGGCAAAGCATTaGCACTTACCCACTCAGCGA +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHYLAKH*HLPTQR
Trigger: TCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATA...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACACCCTGGCTGGCAAGTTaGAGCCAATTCTTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTPWLAS*SQFFRG
Trigger: CCCCCTAAAGAATTGGCTGCAACTTGCCAGCCAGGG...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTGACAGGTCAGCTCCCTaGAGGGCGCGCCCGCTCGCC +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLDRSAP*RARPLA
Trigger: GGCGAGCGGGCGCGCCCTGCAGGGAGCTGACCTGTC...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TTCAATAGCATGGATGGAATGGGGGCTGCATGCCTGGCAAGCACTCAGAGAAAAGCACTCAGAGAAAACTaGCTGAGGACCCAACGGCCA +
Preference number: 4 (lower is better)
Translates to: FNSMDGMGAACLASTQRKALREN*LRTQRP
Trigger: TGGCCGTTGGGTCCTCAGGCAGTTTTCTCTGAGTGC...TTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCATTCCATCCATGCTATTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGAAACTATCAGGGCCTaGTGGTGCAAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGETIRA*WCKQPR
Trigger: GCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATGAAACTATCAGGGCCTaGTGGTGCAAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDETIRA*WCKQPR
Trigger: GCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTC...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGCCATCGGCCTTTGGTaGTTTCTTGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGAIGLW*FLELAL
Trigger: GAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGGCCATCGGCCTTTGGTaGTTTCTTGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWAIGLW*FLELAL
Trigger: GAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGGTCGCTGTTTGGCTTaGGCTTGCTGTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVGRCLA*ACCPHR
Trigger: ACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACC...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACATTCCAGGTCGCTGTTTaGCTTGGGCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTFQVAV*LGLAVL
Trigger: GAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAA...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGTTCCAGGTCGCTGTTTaGCTTGGGCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVFQVAV*LGLAVL
Trigger: GAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAA...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCCCTATTCTGTTGTCTaGCAGCCGAAAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGPYSVV*QPKGLP
Trigger: AGGAAGGCCTTTCGGCTGCCAGACAACAGAATAGGG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCGTGCACCTTTAGTTTaGTCCAGGCCACACCCTTCT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVRAPLV*SRPHPS
Trigger: AGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACATCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTSRCLK*ACMKAC
Trigger: GCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGA...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCTGCACCGGTGTGATTaGCGATACAGTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPLHRCD*RYSWPS
Trigger: AGAAGGCCAACTGTATCGCCAATCACACCGGTGCAG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTGCTGCCAATGCCGCTaGTTGTGCCATTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVCCQCR*LCHCHS
Trigger: AGAATGGCAATGGCACAACCAGCGGCATTGGCAGCA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCACTCGCCCACAGCAATaGGTACCCGTACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPTRPQQ*VPVQSS
Trigger: ACTTGACTGTACGGGTACCCATTGCTGTGGGCGAGT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCACTCGCCCACAGCAATaGGTACCCGTACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVTRPQQ*VPVQSS
Trigger: ACTTGACTGTACGGGTACCCATTGCTGTGGGCGAGT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGGACCTCTTCTACTTCTaGTTTGATATCAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQDLFYF*FDINGA
Trigger: AGCACCATTGATATCAAACCAGAAGTAGAAGAGGTC...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTCCTCACCCACCTCTGTaGGCAAGGGAAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSPHPPL*AREALL
Trigger: GAGCAGGGCTTCCCTTGCCCACAGAGGTGGGTGAGG...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCACTAGCATGAGCACATaGTGTACTTGGCGGGATCTT +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCTSMST*CTWRDL
Trigger: AAGATCCCGCCAAGTACACCATGTGCTCATGCTAGT...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTGTGCAGTGATACTGTaGCTGCGCTGCTCTTTGATT +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCCAVIL*LRCSLI
Trigger: AATCAAAGAGCAGCGCAGCCACAGTATCACTGCACA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTTAGGGGCTTTGACTaGGAGTTTGTTTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQFRGFD*EFVYLS
Trigger: AGAGAGATAAACAAACTCCCAGTCAAAGCCCCTAAA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTATGAGCTTGCAGAGTaGAGGCTGTTGGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPYELAE*RLLGIA
Trigger: TGCGATGCCCAACAGCCTCCACTCTGCAAGCTCATA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCTCTGTTGCAAAACTTaGGCCCCTCCCAACCCAGAC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKLCCKT*APPNPD
Trigger: GTCTGGGTTGGGAGGGGCCCAAGTTTTGCAACAGAG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACGGTTTCAAACCATGTTaGCCAGGCTTGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHGFKPC*PGLSRT
Trigger: AGTTCGAGACAAGCCTGGCCAACATGGTTTGAAACC...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGPLVVS*ACSQQC
Trigger: GCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVPLVVS*ACSQQC
Trigger: GCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGGATGTCCCCGTAGATaGAAGGCAAACTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKGCPRR*KANSSL
Trigger: CAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACATGTATAAATCCCTGTaGACGTGTACTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDMYKSL*TCTPHS
Trigger: AGAATGTGGAGTACACGTTCACAGGGATTTATACAT...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTAGCCGGGGCCGCCGATaGGGGACACCACGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPASRGRR*GTPRRC
Trigger: GCAACGGCGTGGTGTCCCTCATCGGCGGCCCCGGCT...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGGTGGCACTCCCAGATaGGGAAAGTGTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPGGTPR*GKCWQI
Trigger: AATTTGCCAACACTTTCCTCATCTGGGAGTGCCACC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGAAAGATCGCAGCACTaGAAGCCCCTCCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQERSQH*KPLHVC
Trigger: GCAGACGTGGAGGGGCTTTCAGTGCTGCGATCTTTC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTAGGCCACACCCTTCTTaGTACGGATCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGRPHPS*YGSLRS
Trigger: AGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCT...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCAGGCCACACCCTTCTTaGTACGGATCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPRPHPS*YGSLRS
Trigger: AGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTATGTCTGCACCGGTGTaGTTGGCGATACAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFMSAPV*LAIQLA
Trigger: GGCCAACTGTATCGCCAATCACACCGGTGCAGACAT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTGTCCATCCAGCCTTTaGAGGTTGCTACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCCPSSL*RLLLEE
Trigger: TTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGACA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTGTTCCAGCCAATGGTaGAGTAGTAGTGCCTCAACG +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPCSSQW*SSSAST
Trigger: CGTTGAGGCACTACTACTTCACCATTGGCTGGAACA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTTACGGGCCAATCGGATaGCTCGGAATAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFYGPIG*LGIGLG
Trigger: CCCCAACCCTATTCCGAGTCATCCGATTGGCCCGTA...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATCCCTTTGGCGCCTTTaGTCAGACGCAAGATGCGCC +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRSLWRL*SDARCA
Trigger: GGCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGACGCAGTGTGGTTGTaGTTGGCTCGTAAGACACTT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGDAVWL*LARKTL
Trigger: AAGTGTCTTACGAGCCAATCACAACCACACTGCGTC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTGTCCTAAGTTGCATTaGCTGATGTGGAACATGCAG +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSCPKLH*LMWNMQ
Trigger: CTGCATGTTCCACATCAGTCAATGCAACTTAGGACA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCAGCCTGAAGAAACCTaGTTGTTTTCCCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGQPEET*LFSPTH
Trigger: ATGGGTGGGGGAAAACAATCAGGTTTCTTCAGGCTG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTGTTTGGAATCGGCCTaGGCAAGTCCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFCLESA*ASPPQP
Trigger: AGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAACA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCTCATGCATGACTTCTaGTCACGGCATGCCATCATG +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPLMHDF*SRHAIM
Trigger: CATGATGGCATGCCGTGATCAGAAGTCATGCATGAG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACATTTCTCCAAATACAGTaGACGGTGCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTFLQIQ*TVQGWV
Trigger: GACCCAGCCCTGCACCGTTCACTGTATTTGGAGAAA...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATGTCAATTCTCCAGTATaGAGGCTAAACGATCGTCAT +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHVNSPV*RLNDRH
Trigger: ATGACGATCGTTTAGCCTTCATACTGGAGAATTGAC...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTCAGTTCAGAATATCTaGACCCCTCGCGGTATCGAC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPSVQNI*TPRGID
Trigger: GTCGATACCGCGAGGGGTTCAGATATTCTGAACTGA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTCAGTTCAGAATATCTaGACCCCTCGCGGTATCGAC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGSVQNI*TPRGID
Trigger: GTCGATACCGCGAGGGGTTCAGATATTCTGAACTGA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATGTGTGAGTATGCGATaGCCCCTCTGCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQCVSMR*PLCRRE
Trigger: CTCTCTTCTGCAGAGGGGTCATCGCATACTCACACA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTCCTATGAGGCTGGCTaGTGGGTGCCAGATACCAAG +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFSYEAG*WVPDTK
Trigger: CTTGGTATCTGGCACCCATCAGCCAGCCTCATAGGA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGAGAGAGTGAGTGAGTaGGCAGGTGGAAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYERVSE*AGGRTV
Trigger: CACTGTCCTTCCACCTGCTCACTCACTCACTCTCTC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTGAGAGAGTGAGTGAGTaGGCAGGTGGAAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFERVSE*AGGRTV
Trigger: CACTGTCCTTCCACCTGCTCACTCACTCACTCTCTC...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCGGTGTAAACTGCTGGTaGTGGTGTCATTTACTACCA +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCGVNCW*WCHLLP
Trigger: TGGTAGTAAATGACACCATCACCAGCAGTTTACACC...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAGCCAGGTGGATTAGGTaGAGAGAGGTTTTATGGGCC +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTARWIR*REVLWA
Trigger: GGCCCATAAAACCTCTCTTCACCTAATCCACCTGGC...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGCTTGCTCTCAGCAATaGGCCTCTCAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPACSQQ*ASQCLP
Trigger: TGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGCTTGCTCTCAGCAATaGGCCTCTCAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVACSQQ*ASQCLP
Trigger: TGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTTGTTTGGCTTGGGCTTaGTGTCCTCATCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPCLAWA*CPHRPP
Trigger: GGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACA...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGTCCTCCAGGGGAACTaGAACCAGGCCTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEVLQGN*NQALGD
Trigger: ATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGAC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAATCAAAGCCTTTGGTaGCATTTTCAAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSNQSLW*HFQDSS
Trigger: AGAGCTATCTTGAAAATGGCACCAAAGGCTTTGATT...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTATCCCTCTGGGCATTaGCCAGCATCAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVYPSGH*PASELF
Trigger: GAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTATCCCTCTGGGCATTaGCCAGCATCAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGYPSGH*PASELF
Trigger: GAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATTCCTCCACCGTGCTGTaGTCGTCATCCGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNSSTVL*SSSANS
Trigger: TGAGTTCGCGGATGACGAGCACAGCACGGTGGAGGA...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCGTTGCAGTCCACCGTaGTGTTGCGCTTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIRCSPP*CCASRC
Trigger: GCAGCGTGAAGCGCAACAGCACGGTGGACTGCAACG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGCLKWA*MKACTF
Trigger: AAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATCATCAGCCTCACGCTaGTTAAAGTGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQSSASR*LKWACM
Trigger: CATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CATTGCCATTCTTCTGGAAGTCACCATTCCGGTGGATGTCTGCACCGGTGTGATCAATGCCGCTGGTTGTaGCATTGCCATTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HCHSSGSHHSGGCLHRCDQCRWL*HCHSSG
Trigger: TCCAGAAGAATGGCAATGGCACAACCAGCGGCATTG...ATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGAATGGCAATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCCACGCTGCTGCCAATaGCGCTGGTTGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIPRCCQ*RWLCHC
Trigger: GCAATGGCACAACCAGCGGCATTGGCAGCAGCGTGG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCACTTCTCCACGCTGCTaGCAATGCCGCTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFTSPRC*QCRWLC
Trigger: GCACAACCAGCGGCATTGGCAGCAGCGTGGAGAAGT...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTGTACTTCTCCACGCTaGTGCCAATGCCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFCTSPR*CQCRWL
Trigger: CAACCAGCGGCATTGGCAGCAGCGTGGAGAAGTACA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTCCTCATACTTAGGCTaGTCATCAGGCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGSSYLG*SSGFRE
Trigger: TTCCCGGAAGCCTGATGAGCAGCCTAAGTATGAGGA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGGCATCTGCAAAGTCTaGCAGCTTACAGTACTCAAT +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLGICKV*QLTVLN
Trigger: ATTGAGTACTGTAAGCTGGCAGACTTTGCAGATGCC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTACGCTGCAGGACCACTaGAGATACCTCCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPTLQDH*RYLLLL
Trigger: AAGCAGGAGGAGGTATCTGCAGTGGTCCTGCAGCGT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGGATGAAGCCCCGCCTTaGCAAATGTCCCCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMDEAPP*QMSPVG
Trigger: GCCTACCGGGGACATTTGGCAAGGCGGGGCTTCATC...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCCTTCTTCCTTCCTCTaGCCGCTGCTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKPSSFL*PLLFLL
Trigger: AAGGAGAAACAGCAGCGGGCAGAGGAAGGAAGAAGG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSAIFSS*SSFVSY
Trigger: ATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTTGCAAGCAGCCGCGCTaGCATCTTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFCKQPR*HLLILQ
Trigger: CTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCA...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATTGCAAGCAGCCGCGCTaGCATCTTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDCKQPR*HLLILQ
Trigger: CTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCA...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGCTGCAACGGAAATATaGTGGTCCCGGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNAATEI*WSRQPL
Trigger: GAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAGC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAGTTGGGCATCGCACATaGCCTAGCTTTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRVGHRT*PSFGAQ
Trigger: CTGTGCCCCAAAGCTAGGGCATGTGCGATGCCCAAC...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTCGGGGGAGACTGCCATaGCTAGCCTCGATCTATTTG +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVARGRLP*LASIYL
Trigger: CAAATAGATCGAGGCTAGGCATGGCAGTCTCCCCCG...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCATATAAAATGTGTTCTTaGCCCAACCTCCCACTTTTT +
Preference number: 4 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSYKMCS*PNLPLF
Trigger: AAAAAGTGGGAGGTTGGGGCAAGAACACATTTTATA...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp GATGCTGCTTTAGAATGGTGGACAAAACGAATGGAGGAGAAAGAGGAGATGTGGGGATGGAATGGGGGCTaGATGCCTGGCAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: DAALEWWTKRMEEKEEMWGWNGG*MPGKHS
Trigger: TGAGTGCTTGCCAGGCATGCAGCCCCCATTCCATCC...CCACATCTCCTCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGGACTATAGAGGCACATaGCACCATGCCTGGCTAATG +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWDYRGT*HHAWLM
Trigger: CATTAGCCAGGCATGGTGGCATGTGCCTCTATAGTC...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR CCA 90 bp GGTGCCATTTTCAAGATAGCTCTCGTTGAAGTTTATGGGCCACACAACACACTTGAAACTATCAGGGCCTaGTGGTGCAAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: GAIFKIALVEVYGPHNTLETIRA*WCKQPR
Trigger: GCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTC...AAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGAAACTATCAGGGCCTaGTGGTGCAAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSETIRA*WCKQPR
Trigger: GCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVTAIGL*WFLELA
Trigger: AGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWTAIGL*WFLELA
Trigger: AGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGT...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGGTCGCTGTTTGGCTTaGGCTTGCTGTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYGRCLA*ACCPHR
Trigger: ACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTGGTCGCTGTTTGGCTTaGGCTTGCTGTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFGRCLA*ACCPHR
Trigger: ACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACC...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTTTCCAGGTCGCTGTTTaGCTTGGGCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAFQVAV*LGLAVL
Trigger: GAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAA...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGCTGCGTCAAATAGTATaGGTCAAAGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWLRQIV*VKVLQG
Trigger: CCCCTGGAGGACTTTGACCCATACTATTTGACGCAG...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATCCCAATCAAAGCCTTTaGTGCCATTTTCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHPNQSL*CHFQDS
Trigger: GCTATCTTGAAAATGGCACCAAAGGCTTTGATTGGG...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGACACTGGTATCCCTCTaGGCATTGCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKTLVSL*ALPSIR
Trigger: TCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGT...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCCCTATTCTGTTGTCTaGCAGCCGAAAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKPYSVV*QPKGLP
Trigger: AGGAAGGCCTTTCGGCTGCCAGACAACAGAATAGGG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATAGACGCCCGCCGATGTaGGAGCCGGGGCCGCCGATG +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNRRPPM*EPGPPM
Trigger: CATCGGCGGCCCCGGCTCCCACATCGGCGGGCGTCT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCTCAGTTGTAGCCTCTaGCAGGAGACGCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPELSCSL*QETPAD
Trigger: ATCGGCGGGCGTCTCCTGCCAGAGGCTACAACTGAG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CATTGGCAGATCCATAGCGATGAGCTCAATGGTATTGGGCTTGGGCACTCGGAGCGGATCACTGAGATCTaGAGGTTGTTCATTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HWQIHSDELNGIGLGHSERITEI*RLFISP
Trigger: TGGGGAAATGAACAACCTCCAGATCTCAGTGATCCG...CTCCGAGTGCCCAAGCCCAATACCATTGAGCTCATCGCTATGGATCTGCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCCATTGCCATTCTTCTaGAAGTCACCATTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPPLPFF*KSPFRW
Trigger: CCACCGGAATGGTGACTTCCAGAAGAATGGCAATGG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCCATTGCCATTCTTCTaGAAGTCACCATTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGPLPFF*KSPFRW
Trigger: CCACCGGAATGGTGACTTCCAGAAGAATGGCAATGG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCCATTGCCATTCTTCTaGAAGTCACCATTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVPLPFF*KSPFRW
Trigger: CCACCGGAATGGTGACTTCCAGAAGAATGGCAATGG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCACCGGTGTGATTGGCGATACAGTTGGCCTTCTTTTCATACAACTCATCCAGTCCTCGATGTTGACCTaGCAGCACTTGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: CTGVIGDTVGLLFIQLIQSSMLT*QHLNRW
Trigger: CCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGA...CTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTCAAAGACGATTCCTTaGATTTTGTTCAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCSKTIP*ILFKGR
Trigger: CCGCCCCTTGAACAAAATCCAAGGAATCGTCTTTGA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GTCCATCCAGCCTTTGAAGGTTGCTACTTGAAGAAGGGCCAGGTATCCTGCCCCTCAAAGACGATTCCTTaGATTTTGTTCAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VHPAFEGCYLKKGQVSCPSKTIP*ILFKGR
Trigger: CCGCCCCTTGAACAAAATCCAAGGAATCGTCTTTGA...GGGGCAGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGGGGGGCGGTTTAGGATaGGCAGCAGCAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLGGGLG*AAAGHP
Trigger: GGGATGGCCTGCTGCTGCCCATCCTAAACCGCCCCC...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCGGGGGCGGTTTAGGATaGGCAGCAGCAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSGGGLG*AAAGHP
Trigger: GGGATGGCCTGCTGCTGCCCATCCTAAACCGCCCCC...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGATCCCCGCTCACCATTaGCAGATCCATAGCGATGAG +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKIPAHH*QIHSDE
Trigger: CTCATCGCTATGGATCTGCCAATGGTGAGCGGGGAT...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCGGGCGGGACTGCGGTaGGCGCCATCTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPRAGLR*APSWSA
Trigger: AGCGCTCCAAGATGGCGCCCACCGCAGTCCCGCCCG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGTGTCCTGTGGTGTATaGATCTCATGCATGACTTCT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSVSCGV*ISCMTS
Trigger: AGAAGTCATGCATGAGATCCATACACCACAGGACAC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGGTGTCCTGTGGTGTATaGATCTCATGCATGACTTCT +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLVSCGV*ISCMTS
Trigger: AGAAGTCATGCATGAGATCCATACACCACAGGACAC...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGTATCGACCCATGCCTaGAGAAAGCCACAATGCAGA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVVSTHA*RKPQCR
Trigger: TCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATAC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCCAGTCCAGCTGGGTTaGCTGACGTCATCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGPVQLG*LTSSLR
Trigger: CCTCAGAGATGACGTCAGCCAACCCAGCTGGACTGG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCTCCTGATGTCCCCCTaGCTGGCAAGTTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGLLMSP*LASCSQ
Trigger: TTGGCTGCAACTTGCCAGCCAGGGGGACATCAGGAG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGAGACTTGGTCATTGGTaGTGGCTCCATGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWRLGHW*WLHGIL
Trigger: GAGAATGCCATGGAGCCACCACCAATGACCAAGTCT...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR CAA 72 bp ACACCCTTCTTGATACGGATCACTGAGATCTGGAGGTaGTTCATTTCCCCATCGTCATCTGTGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TPFLIRITEIWR*FISPSSSVAAR
Trigger: CCTGGCTGCCACAGATGACGATGGGGAAATGAACAACCTCCAGATCTCAGTGATCCGTATCAAGAAGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 72 bp TTAAAGTGGGCCTGCATGAAGGCGTGCACCTTTAGTTaGGTCCAGGCCACACCCTTCTTGATACGGATCACT +
Preference number: 4 (lower is better)
Translates to: LKWACMKACTFS*VQATPFLIRIT
Trigger: AGTGATCCGTATCAAGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGCCCACTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 72 bp AGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATaGGTGGTGGCTCCATGGCATTCTCATTCCATCCGG +
Preference number: 4 (lower is better)
Translates to: SNGSSKPVQTWS*VVAPWHSHSIR
Trigger: CCGGATGGAATGAGAATGCCATGGAGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp TTCAATAGCATGGATGGAATGGGGGCTGCATGCCTGGCAAGCACTCAGAGAAAACTCAATGTTTGCCAGTaGCTCAGGGGTGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: FNSMDGMGAACLASTQRKLNVCQ*LRGERL
Trigger: AAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAG...TTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCATTCCATCCATGCTATTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTCATCGTCCTCCCGATaGCTGCCATCGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTISSSSR*LPSAFG
Trigger: ACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATCATCGTCCTCCCGATaGCTGCCATCGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTSSSSR*LPSAFG
Trigger: ACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTGGATGTCCCCGTAGATaGAAGGCAAACTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAGCPRR*KANSSL
Trigger: CAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCC...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTTTCGAAGGTTCCCCATaGACAGCTGCAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPFEGSP*TAAVRS
Trigger: TGATCGGACTGCAGCTGTTCATGGGGAACCTTCGAA...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTTCGAAGGTTCCCCATaGACAGCTGCAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFFEGSP*TAAVRS
Trigger: TGATCGGACTGCAGCTGTTCATGGGGAACCTTCGAA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCAAGAACCCACAAAGATaGCCAAGACGAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSKNPQR*PRRRRS
Trigger: TGATCTTCTTCGTCTTGGTCATCTTTGTGGGTTCTT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGAAGAACCCACAAAGATaGCCAAGACGAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLKNPQR*PRRRRS
Trigger: TGATCTTCTTCGTCTTGGTCATCTTTGTGGGTTCTT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGCAGTGACTGATTCATaGTGGAAAATTTCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSAVTDS*WKISSL
Trigger: TAGGGAGGAAATTTTCCATCATGAATCAGTCACTGC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACGCAGTGACTGATTCATaGTGGAAAATTTCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHAVTDS*WKISSL
Trigger: TAGGGAGGAAATTTTCCATCATGAATCAGTCACTGC...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCACTCATTATACTGTTaGTTCTGTCCTTCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGHSLYC*FCPSAR
Trigger: ACGGGCGGAAGGACAGAATCAACAGTATAATGAGTG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGAAAGATCGCAGCACTaGAAGCCCCTCCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIERSQH*KPLHVC
Trigger: GCAGACGTGGAGGGGCTTTCAGTGCTGCGATCTTTC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGTGTGGTCCTCATCAATaGTGTACTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKCGPHQ*CTSPRC
Trigger: GCAGCGTGGAGAAGTACATCATTGATGAGGACCACA...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTTGAAGGTTGCTACTTaGAGAAGGGCCAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGLKVAT*RRARYP
Trigger: AGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTTGAAGGTTGCTACTTaGAGAAGGGCCAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVLKVAT*RRARYP
Trigger: AGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGTCCATCTGCTTGCTTTaGGTGTCTGTCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKSICLL*VSVSTI
Trigger: GATGGTGGAGACAGACACTCAAAGCAAGCAGATGGA...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTACGGGCCAATCGGATaGCTCGGAATAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEYGPIG*LGIGLG
Trigger: CCCCAACCCTATTCCGAGTCATCCGATTGGCCCGTA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTCCCTTTGGCGCCTTTaGTCAGACGCAAGATGCGCC +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPESLWRL*SDARCA
Trigger: GGCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTGAAGAAGATGCCCACTaGGGGGTTCCCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFEEDAH*GVPTIS
Trigger: GGAGATTGTGGGAACCCCTCAGTGGGCATCTTCTTC...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGAAGAAGATGCCCACTaGGGGGTTCCCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQEEDAH*GVPTIS
Trigger: GGAGATTGTGGGAACCCCTCAGTGGGCATCTTCTTC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTTGTCTTTTTGCAGATaGAGCCCCGCCTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVLSFCR*SPALPN
Trigger: ATTTGGCAAGGCGGGGCTTCATCTGCAAAAAGACAA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGTGTTTGGAATCGGCCTaGGCAAGTCCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVCLESA*ASPPQP
Trigger: AGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAACA...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTATGGATCTCATGCATaGCTTCTGATCACGGCATGC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPYGSHA*LLITAC
Trigger: GCATGCCGTGATCAGAAGTCATGCATGAGATCCATA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCCCCCATAACTCCCAATaGAAGGTCATTTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCPHNSQ*KVILSS
Trigger: GGAACTTAAAATGACCTTTCATTGGGAGTTATGGGG...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATATGGAATGGAAGATATaGCGCTCCCCCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYMEWKI*RSPRSH
Trigger: GTGGCTTCTGGGGGAGCGTCATATCTTCCATTCCAT...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTATGGAATGGAAGATATaGCGCTCCCCCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFMEWKI*RSPRSH
Trigger: GTGGCTTCTGGGGGAGCGTCATATCTTCCATTCCAT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGCAGATCGGTGTGTCTaGTTATGGGTTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPADRCV*LWVGSS
Trigger: AGAAGAACCAACCCATAATCAGACACACCGATCTGC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGTGGCTTCTTTCCTATaGGGCTGGCTGATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIVASFL*GWLMGA
Trigger: GGCACCCATCAGCCAGCCTCATAGGAAAGAAGCCAC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGCCAGGTGGATTAGGTaGAGAGAGGTTTTATGGGCC +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYARWIR*REVLWA
Trigger: GGCCCATAAAACCTCTCTTCACCTAATCCACCTGGC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGACTTCGAGATCCTCCTaGGAGAGTGTTCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKTSRSS*ESVPEP
Trigger: TGGTTCAGGAACACTCTCTCAGGAGGATCTCGAAGT...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCAAGTCACAAAGTCATaGCCCATGGCGATCTCACCT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKQVTKS*PMAISP
Trigger: AGGTGAGATCGCCATGGGTCATGACTTTGTGACTTG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCACAGAGAGGTTAAGTaGCTTGCCCAAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPHREVK*LAQGHT
Trigger: TGTGTGGCCTTGGGCAAGTCACTTAACCTCTCTGTG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGGTTCCCACAATCTCCCTTAAAGCCACTCCCTGGGTGTTCCTTATCTAGGCTGGAGGTGCTCACTTCTTaGTTTACACTTGGTCCTTAC +
Preference number: 4 (lower is better)
Translates to: GFPQSPLKPLPGCSLSRLEVLTS*FTLGPY
Trigger: GTAAGGACCAAGTGTAAATCAAGAAGTGAGCACCTC...CAGCCTAGATAAGGAACACCCAGGGAGTGGCTTTAAGGGAGATTGTGGGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGGGAGTTTATACCAGCTaGAGAGGGACTGAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWGVYTS*RGTEES
Trigger: ACTTTCCTCAGTCCCTCTTCAGCTGGTATAAACTCC...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGCTTGCTCTCAGCAATaGGCCTCTCAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVACSQQ*ASQCLP
Trigger: TGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGC...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACGTCCTCCCGATGACTaGCATCGGCCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTRPPDD*HRPLVV
Trigger: AACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTGTTTGGCTTGGGCTTaGTGTCCTCATCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQCLAWA*CPHRPP
Trigger: GGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATGTTTGGCTTGGGCTTaGTGTCCTCATCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRCLAWA*CPHRPP
Trigger: GGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTTCCCCATGAACAGCTaGAGTCCGATCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVFPMNS*SPIKAK
Trigger: TTTTGCCTTGATCGGACTGCAGCTGTTCATGGGGAA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGTAAAGGTTCCAGCATaGCAGGAACTGTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSVKVPA*QELCRN
Trigger: ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTAC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGTCCTCCACCGTGCTGTaGTCGTCATCCGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMSSTVL*SSSANS
Trigger: TGAGTTCGCGGATGACGAGCACAGCACGGTGGAGGA...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTCATCAGCCTCACGCTaGTTAAAGTGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFSSASR*LKWACM
Trigger: CATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGACTTCTCCACGCTGCTaGCAATGCCGCTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPETSPRC*QCRWLC
Trigger: GCACAACCAGCGGCATTGGCAGCAGCGTGGAGAAGT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTACTTCTCCACGCTGCTaGCAATGCCGCTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTITSPRC*QCRWLC
Trigger: GCACAACCAGCGGCATTGGCAGCAGCGTGGAGAAGT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCTAGTTTATCTTTGCTaGCTTCAGGATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVLVYLC*LQDPTR
Trigger: GCGAGTCGGATCCTGAAGGCAGCAAAGATAAACTAG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCATATTCCAGGATGGTaGGGATGGTCTTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVHIPGW*GWSFSA
Trigger: AGCAGAGAAAGACCATCCGCACCATCCTGGAATATG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTTACAAAGAAGAAGATaGCCACTGAGGGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGLQRRR*PLRGSH
Trigger: GTGGGAACCCCTCAGTGGGCATCTTCTTCTTTGTAA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCTGTCCAAGCAGTGGATaGGATCCCCGCTCACCATTG +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGCPSSG*DPRSPL
Trigger: CAATGGTGAGCGGGGATCGCATCCACTGCTTGGACA...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCAACCGCTCTTCCATCTaGTGCCGCAGGATGTCCAAC +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGNRSSI*CRRMSN
Trigger: GTTGGACATCCTGCGGCAGCAGATGGAAGAGCGGTT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGCAGATACCTCCTCCTaGTTGCGACGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNADTSS*LRRSVV
Trigger: AACCACACTGCGTCGCAAGCAGGAGGAGGTATCTGC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTTTTCTCCCGGTGTGTaGCTCCATTCTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGFSPGV*LHSPAY
Trigger: ATAAGCTGGAGAATGGAGGCACACACCGGGAGAAAA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCTTCTTCCTTCCTCTaGCCGCTGCTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFPSSFL*PLLFLL
Trigger: AAGGAGAAACAGCAGCGGGCAGAGGAAGGAAGAAGG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCCTTCTTCCTTCCTCTaGCCGCTGCTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPPSSFL*PLLFLL
Trigger: AAGGAGAAACAGCAGCGGGCAGAGGAAGGAAGAAGG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGCTGCAACGGAAATATaGTGGTCCCGGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTAATEI*WSRQPL
Trigger: GAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAGC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGGTGTATGGATCTCATaGATGACTTCTGATCACGGC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVGVWIS*MTSDHG
Trigger: GCCGTGATCAGAAGTCATGCATGAGATCCATACACC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTAAATACAGTGAACGGTaGAGGGCTGGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFKYSER*RAGSCP
Trigger: TGGACAGGACCCAGCCCTGCACCGTTCACTGTATTT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCGCAACGGATCCATCTaGTTGTTGGATTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGRNGSI*LLDWVC
Trigger: ACAAACCCAATCCAACAAGCAGATGGATCCGTTGCG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCTGGCTGCAAGGGAATaGACTGAGGGAAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFLAARE*TEGSWN
Trigger: GTTCCAGCTTCCCTCAGTGCATTCCCTTGCAGCCAG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCTGGCTGCAAGGGAATaGACTGAGGGAAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNLAARE*TEGSWN
Trigger: GTTCCAGCTTCCCTCAGTGCATTCCCTTGCAGCCAG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTTCTACGGATGCTGCTaGAGAAGCAGGCTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGFYGCC*RSRLKR
Trigger: TCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGAGTTTAGCCAAATCTTaGATAGACGTGGTTAGAATT +
Preference number: 4 (lower is better)
Translates to: DLPKATQRASGQARDRTQSLAKS*IDVVRI
Trigger: AATTCTAACCACGTCTATGCAAGATTTGGCTAAACT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATAACCATGTCAGCTGCTaGTCAGTGGCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYNHVSC*SVALAL
Trigger: CAGAGCCAAAGCCACTGAGCAGCAGCTGACATGGTT...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGTTGGGCATCGCACATaGCCTAGCTTTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIVGHRT*PSFGAQ
Trigger: CTGTGCCCCAAAGCTAGGGCATGTGCGATGCCCAAC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGAAGGAAGAGGAAGCGTaGCCCCACCCCCACACAAAT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQKEEEA*PHPHTN
Trigger: ATTTGTGTGGGGGTGGGGGCACGCTTCCTCTTCCTT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGCATCATTACAGAAGATaGCCAGGACTCAAGTCACAA +
Preference number: 4 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLHHYRR*PGLKSQ
Trigger: TTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATG...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCCCTGGCTGGCAAGTTaGAGCCAATTCTTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFPWLAS*SQFFRG
Trigger: CCCCCTAAAGAATTGGCTGCAACTTGCCAGCCAGGG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACAAACTCTGTCACATATaGCATCATGATGACACTGAA +
Preference number: 4 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDKLCHI*HHDDTE
Trigger: TTCAGTGTCATCATGATGGCATATGTGACAGAGTTT...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638820.1
CDS-3UTR GCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACACTGTCATCGGTAGCTaGCTTATCAATTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHTVIGS*LINFHL
Trigger: GAGGTGAAAATTGATAAGGCAGCTACCGATGACAGT...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATCGGGGGAGACTGCCATaGCTAGCCTCGATCTATTTG +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDRGRLP*LASIYL
Trigger: CAAATAGATCGAGGCTAGGCATGGCAGTCTCCCCCG...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp GGTGCCATTTTCAAGATAGCTCTCGTTGAAGTTTATGGGCCACACAACACACTTGGAATGGGGGCTGCATaGCTGGCAAGCACTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GAIFKIALVEVYGPHNTLGMGAA*LASTQR
Trigger: TCTCTGAGTGCTTGCCAGGCATGCAGCCCCCATTCC...AAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGACTATCAGGGCCTGGTaGTGCAAGCAGCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLTIRAW*CKQPRC
Trigger: GCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTGCCATCGGCCTTTGGTaGTTTCTTGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFAIGLW*FLELAL
Trigger: GAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTTAIGL*WFLELA
Trigger: AGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCTTCCAGGTCGCTGTTTaGCTTGGGCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGFQVAV*LGLAVL
Trigger: GAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAA...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAACTGCGTCAAATAGTATaGGTCAAAGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQLRQIV*VKVLQG
Trigger: CCCCTGGAGGACTTTGACCCATACTATTTGACGCAG...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAAATTGTCTTCAGGCCTaGGATTACCGAAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQNCLQA*DYRNSF
Trigger: AAAACTATTTCGGTAATCCCAGGCCTGAAGACAATT...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTACACTGGTATCCCTCTaGGCATTGCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPTLVSL*ALPSIR
Trigger: TCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTACACTGGTATCCCTCTaGGCATTGCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVATLVSL*ALPSIR
Trigger: TCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGT...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTATTCTGTTGTCTaGCAGCCGAAAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFPYSVV*QPKGLP
Trigger: AGGAAGGCCTTTCGGCTGCCAGACAACAGAATAGGG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTCCCTATTCTGTTGTCTaGCAGCCGAAAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAPYSVV*QPKGLP
Trigger: AGGAAGGCCTTTCGGCTGCCAGACAACAGAATAGGG...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTCGCTGCGCCGCAGGCTaGGGAAGATGCGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPARCAAG*GRCARS
Trigger: GCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCG...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATTCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNSRCLK*ACMKAC
Trigger: GCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGA...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCTCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGSRCLK*ACMKAC
Trigger: GCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGA...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCTGCACCGGTGTGATTaGCGATACAGTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYLHRCD*RYSWPS
Trigger: AGAAGGCCAACTGTATCGCCAATCACACCGGTGCAG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACACAGCACTTGAACCGCTaGACACAACCTTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTQHLNR*TQPSVK
Trigger: CTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTG...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCAGCATATTCCAGGATaGTGCGGATGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGQHIPG*CGWSFS
Trigger: AGAGAAAGACCATCCGCACCATCCTGGAATATGCTG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCAATGGTATTGGGCTTaGGCACTCGGAGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPQWYWA*ALGEDA
Trigger: AGCATCCTCTCCGAGTGCCCAAGCCCAATACCATTG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGAGGATGTCCAAGCAGTaGATGCGATCCCCGCTCACC +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPERMSKQ*MRSPLT
Trigger: GGTGAGCGGGGATCGCATCCACTGCTTGGACATCCT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGCTCGTAAGACACTTTaGAAGGATTGGATGCCACGA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPARKTL*KDWMPR
Trigger: TCGTGGCATCCAATCCTTCCAAAGTGTCTTACGAGC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGCAACGGAAATATGCTaGTCCCGGCAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGATEIC*SRQPLF
Trigger: GAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGCAACGGAAATATGCTaGTCCCGGCAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQATEIC*SRQPLF
Trigger: GAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPNEHNV*NRPEQV
Trigger: GACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVNEHNV*NRPEQV
Trigger: GACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGTATCGACCCATGCCTaGAGAAAGCCACAATGCAGA +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKVSTHA*RKPQCR
Trigger: TCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATAC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGTATCGACCCATGCCTaGAGAAAGCCACAATGCAGA +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQVSTHA*RKPQCR
Trigger: TCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATAC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTCTGTCTGTCTGGTTTaGGGATGTACATTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGSVCLV*GCTLAD
Trigger: GTCAGCCAATGTACATCCCCAAACCAGACAGACAGA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAACTAATCTTCACTGTTaGTCTTTTACAGGTTTACGT +
Preference number: 4 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWATNLHC*SFTGLR
Trigger: ACGTAAACCTGTAAAAGACCAACAGTGAAGATTAGT...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTGGAGCGGACTAGAGTaGGCACTTCGAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQWSGLE*ALRDPP
Trigger: AGGAGGATCTCGAAGTGCCCACTCTAGTCCGCTCCA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGAGAAATGTTAGGAGATaGCTCTTCCCAAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWRNVRR*LFPKRG
Trigger: GCCCCTCTTTGGGAAGAGCCATCTCCTAACATTTCT...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATTGGGGGCTGCATGCCTaGCAAGCACTCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QNCSHRVKVPACQELCRNWGLHA*QALREN
Trigger: GTTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCA...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CAA 72 bp GCGTGCACCTTTAGTTTGGTCCAGGCCACACCCTTCTaGATACGGATCACTGAGATCTGGAGGTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ACTFSLVQATPF*IRITEIWRLFI
Trigger: AATGAACAACCTCCAGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
3UTR CAA 72 bp CCCACAGCAATGGGTACCCGTACAGTCAAGTTGGGGTaGTTGATGAAGGACATGTGGTCCTCATCAATGATG +
Preference number: 4 (lower is better)
Translates to: PTAMGTRTVKLG*LMKDMWSSSMM
Trigger: CATCATTGATGAGGACCACATGTCCTTCATCAACAACCCCAACTTGACTGTACGGGTACCCATTGCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp TGCAAGGCCATTATCAACTGTACTGATGCTGCTTTAGAATGGTGGACAAAACGATCATCGTCCTCCCGATaGCTGCCATCGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: CKAIINCTDAALEWWTKRSSSSR*LPSAFG
Trigger: ACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGA...TCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAGGATGTCCCCGTAGATaGAAGGCAAACTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRGCPRR*KANSSL
Trigger: CAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCC...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATGGATGTCCCCGTAGATaGAAGGCAAACTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDGCPRR*KANSSL
Trigger: CAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCC...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGGATGTCCCCGTAGATaGAAGGCAAACTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGGCPRR*KANSSL
Trigger: CAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCATGTATAAATCCCTGTaGACGTGTACTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSMYKSL*TCTPHS
Trigger: AGAATGTGGAGTACACGTTCACAGGGATTTATACAT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATTCGAAGGTTCCCCATaGACAGCTGCAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRFEGSP*TAAVRS
Trigger: TGATCGGACTGCAGCTGTTCATGGGGAACCTTCGAA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGQDSSR*SLWATQ
Trigger: TTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTTCCTTTGCACTCTTTaGGCTGAGTTTAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCFLCTL*AEFRDF
Trigger: GAAATCTCTAAACTCAGCTCAAAGAGTGCAAAGGAA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTGGGATGCTGAGCAGTaGCTGATTCATGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGWDAEQ*LIHDGK
Trigger: TTTTCCATCATGAATCAGTCACTGCTCAGCATCCCA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGGCGGGCACTTTCTCTaGGACTCTTCCAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGGGHFL*DSSSSS
Trigger: AGAAGAACTGGAAGAGTCTCAGAGAAAGTGCCCGCC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTATGTCTGCACCGGTGTaGTTGGCGATACAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSMSAPV*LAIQLA
Trigger: GGCCAACTGTATCGCCAATCACACCGGTGCAGACAT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTGTGGTCCTCATCAATaGTGTACTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFCGPHQ*CTSPRC
Trigger: GCAGCGTGGAGAAGTACATCATTGATGAGGACCACA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCTTCTACTTCTGGTTTaGTATCAATGGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSLLLLV*YQWCFL
Trigger: AAGGAAGCACCATTGATATCAAACCAGAAGTAGAAG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTCACGTTCTTCCATCTaGTCTCTGTATTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGSRSSI*SLYCSP
Trigger: AGGGGAACAATACAGAGATCAGATGGAAGAACGTGA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTGTCCATCCAGCCTTTaGAGGTTGCTACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGCPSSL*RLLLEE
Trigger: TTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGACA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTGTTCCAGCCAATGGTaGAGTAGTAGTGCCTCAACG +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFCSSQW*SSSAST
Trigger: CGTTGAGGCACTACTACTTCACCATTGGCTGGAACA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGAAGAAGATGCCCACTaGGGGGTTCCCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTEEDAH*GVPTIS
Trigger: GGAGATTGTGGGAACCCCTCAGTGGGCATCTTCTTC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCATCTCCAAACCACGTaGAGCCCATGTGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYHLQTT*SPCGED
Trigger: ATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTGTTTGGAATCGGCCTaGGCAAGTCCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPECLESA*ASPPQP
Trigger: AGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAACA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTCAGTTCAGAATATCTaGACCCCTCGCGGTATCGAC +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYSVQNI*TPRGID
Trigger: GTCGATACCGCGAGGGGTTCAGATATTCTGAACTGA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTGTGTGAGTATGCGATaGCCCCTCTGCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFCVSMR*PLCRRE
Trigger: CTCTCTTCTGCAGAGGGGTCATCGCATACTCACACA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATGTGTGAGTATGCGATaGCCCCTCTGCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRCVSMR*PLCRRE
Trigger: CTCTCTTCTGCAGAGGGGTCATCGCATACTCACACA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGGAGCCATGCAGTGTGTaGGTATGCGATGACCCCTCT +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMEPCSV*VCDDPS
Trigger: AGAGGGGTCATCGCATACTCACACACTGCATGGCTC...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGAGCCATGCAGTGTGTaGGTATGCGATGACCCCTCT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIEPCSV*VCDDPS
Trigger: AGAGGGGTCATCGCATACTCACACACTGCATGGCTC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGGTGTAAACTGCTGGTaGTGGTGTCATTTACTACCA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPGVNCW*WCHLLP
Trigger: TGGTAGTAAATGACACCATCACCAGCAGTTTACACC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTATATATATGTGCAGTaGTACTGTGGCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGYIYVQ*YCGCAA
Trigger: AGCAGCGCAGCCACAGTATCACTGCACATATATATA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGTTGCGAGAGCCCCTTTaGTTTCTCTTCCCTCTATTC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKLREPL*FLFPLF
Trigger: GAATAGAGGGAAGAGAAATCAAAGGGGCTCTCGCAA...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATTGCGAGAGCCCCTTTaGTTTCTCTTCCCTCTATTC +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQLREPL*FLFPLF
Trigger: GAATAGAGGGAAGAGAAATCAAAGGGGCTCTCGCAA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGCCAGGTGGATTAGGTaGAGAGAGGTTTTATGGGCC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNARWIR*REVLWA
Trigger: GGCCCATAAAACCTCTCTTCACCTAATCCACCTGGC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTACTTCGAGATCCTCCTaGGAGAGTGTTCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPTSRSS*ESVPEP
Trigger: TGGTTCAGGAACACTCTCTCAGGAGGATCTCGAAGT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGCACAGAGAGGTTAAGTaGCTTGCCCAAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVHREVK*LAQGHT
Trigger: TGTGTGGCCTTGGGCAAGTCACTTAACCTCTCTGTG...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGGAGTTTATACCAGCTaGAGAGGGACTGAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVGVYTS*RGTEES
Trigger: ACTTTCCTCAGTCCCTCTTCAGCTGGTATAAACTCC...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp GGTGCCATTTTCAAGATAGCTCTCGTTGAAGTTTATGGGCCACACAACACACTTTCAGAGAAAACTGCCTaGGGACCCAACGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: GAIFKIALVEVYGPHNTLSEKTA*GPNGHS
Trigger: GGAATGGCCGTTGGGTCCTCAGGCAGTTTTCTCTGA...AAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp TGCAAGGCCATTATCAACTGTACTGATGCTGCTTTAGAATGGTGGACAAAACGACGTCCTCCCGATGACTaGCATCGGCCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: CKAIINCTDAALEWWTKRRPPDD*HRPLVV
Trigger: AACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG...TCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGTTGGGGTTCCTTCCTaGTTTCATACACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQVGVPS*FHTLVS
Trigger: GGATACCAGTGTATGAAAGCAGGAAGGAACCCCAAC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCATCGCAGCAGCCTGTaGCTCTTCCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFHRSSL*LFLLLL
Trigger: AAGAAGCAACAGGAAGAGGCACAGGCTGCTGCGATG...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAAGGCCTTCCTTCTCATaGCATCTTCTGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQRPSFS*HLLTLT
Trigger: AGTCAGAGTCAGAAGATGGCATGAGAAGGAAGGCCT...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGCCTGCATGAAGGCGTaGACCTTTAGTTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFACMKA*TFSLVQ
Trigger: CTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGGCCTGCATGAAGGCGTaGACCTTTAGTTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVACMKA*TFSLVQ
Trigger: CTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGC...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAATTCCGGTGGATGTCTaGACCGGTGTGATTGGCGAT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRIPVDV*TGVIGD
Trigger: ATCGCCAATCACACCGGTGCAGACATCCACCGGAAT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCGCTGGTTGTGCCATTaGCATTCTTCTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPRWLCH*HSSGSH
Trigger: GTGACTTCCAGAAGAATGGCAATGGCACAACCAGCG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCAATGCCGCTGGTTGTaGCATTGCCATTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYQCRWL*HCHSSG
Trigger: TCCAGAAGAATGGCAATGGCACAACCAGCGGCATTG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCCCACGCTGCTGCCAATaGCGCTGGTTGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSPRCCQ*RWLCHC
Trigger: GCAATGGCACAACCAGCGGCATTGGCAGCAGCGTGG...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp GTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATACTTCTCCACGCTGCTaGCAATGCCGCTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: VKVDLHVLPSDLCIVPLHTSPRC*QCRWLC
Trigger: GCACAACCAGCGGCATTGGCAGCAGCGTGGAGAAGT...ATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTGTACTTCTCCACGCTaGTGCCAATGCCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSCTSPR*CQCRWL
Trigger: CAACCAGCGGCATTGGCAGCAGCGTGGAGAAGTACA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GGGTTCCCACAATCTCCCTTAAAGCCACTCCCTGGGTGTTCCTTATCTAGGCTGCATCTAGTTTATCTTTaGTGCCTTCAGGATCCGACT +
Preference number: 4 (lower is better)
Translates to: GFPQSPLKPLPGCSLSRLHLVYL*CLQDPT
Trigger: AGTCGGATCCTGAAGGCAGCAAAGATAAACTAGATG...CAGCCTAGATAAGGAACACCCAGGGAGTGGCTTTAAGGGAGATTGTGGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTGTTCTCCATCTGCTTaGTTTGAGTGTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPCSPSA*FECLSP
Trigger: TGGAGACAGACACTCAAAGCAAGCAGATGGAGAACA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TACAACTCATCCAGAGGCTTCACCTCATCAGCCTCACGCTGCTTAAAGTGGGCCTCGATACCAGCCTCGTaGTTCACATATGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: YNSSRGFTSSASRCLKWASIPAS*FTYAKL
Trigger: CAATTTTGCATATGTGAAGCACGAGGCTGGTATCGA...GGCCCACTTTAAGCAGCGTGAGGCTGATGAGGTGAAGCCTCTGGATGAGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGGCACTCGGAGAGGATaGTCCAAGGCATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTGTRRG*SKASAK
Trigger: CTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGCAGATACCTCCTCCTaGTTGCGACGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIADTSS*LRRSVV
Trigger: AACCACACTGCGTCGCAAGCAGGAGGAGGTATCTGC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGCAGATACCTCCTCCTaGTTGCGACGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTADTSS*LRRSVV
Trigger: AACCACACTGCGTCGCAAGCAGGAGGAGGTATCTGC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCCTTCTTCCTTCCTCTaGCCGCTGCTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGPSSFL*PLLFLL
Trigger: AAGGAGAAACAGCAGCGGGCAGAGGAAGGAAGAAGG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVAIFSS*SSFVSY
Trigger: ATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCTTTCATACACTGGTATCCCTCTGGGCATTGCCCAGCATCAGAACTGTTCCGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: LLSYTGIPLGIAQHQNCSAIFSS*SSFVSY
Trigger: ATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGC...GGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPAIFSS*SSFVSY
Trigger: ATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGGTGTATGGATCTCATaGATGACTTCTGATCACGGC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKGVWIS*MTSDHG
Trigger: GCCGTGATCAGAAGTCATGCATGAGATCCATACACC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCGCGGTATCGACCCATaGCTGGAGAAAGCCACAATG +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPERGIDP*LEKATM
Trigger: CATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACGCGGTATCGACCCATaGCTGGAGAAAGCCACAATG +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTRGIDP*LEKATM
Trigger: CATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGGGCAAGGGAAGCCCTaGTCAGTGGAGAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNGQGKP*SVEKCD
Trigger: ATCACATTTCTCCACTGAGCAGGGCTTCCCTTGCCC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACACCCACTCAGCGAAGATaGACAAAAACGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTPTQRR*TKTSSL
Trigger: CAGTGATGACGTTTTTGTGCATCTTCGCTGAGTGGG...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACAGCACATCTCATTCTTaGAGAGGAGACTTAGAACAT +
Preference number: 4 (lower is better)
Translates to: LLASLTSPCLALLAHTSHSTSHS*RGDLEH
Trigger: ATGTTCTAAGTCTCCTCTGCAAGAATGAGATGTGCT...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAGTTTTCCTCCATACATaGATCATGCTAATTAAAGGA +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQVFLHT*IMLIKG
Trigger: TCCTTTAATTAGCATGATGCATGTATGGAGGAAAAC...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATGCCATCGGCCTTTGGTaGTTTCTTGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDAIGLW*FLELAL
Trigger: GAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVATAIGL*WFLELA
Trigger: AGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGT...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGGTCGCTGTTTGGCTTaGGCTTGCTGTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIGRCLA*ACCPHR
Trigger: ACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGGTCGCTGTTTGGCTTaGGCTTGCTGTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSGRCLA*ACCPHR
Trigger: ACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTTCCAGGTCGCTGTTTaGCTTGGGCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIFQVAV*LGLAVL
Trigger: GAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGACGTGCACCTTTAGTTTaGTCCAGGCCACACCCTTCT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRRAPLV*SRPHPS
Trigger: AGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACG...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATGCTGCCAATGCCGCTaGTTGTGCCATTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRCCQCR*LCHCHS
Trigger: AGAATGGCAATGGCACAACCAGCGGCATTGGCAGCA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGTCCTCGATGTTGACCTaGCAGCACTTGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMSSMLT*QHLNRW
Trigger: CCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGA...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTCCTCGATGTTGACCTaGCAGCACTTGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTISSMLT*QHLNRW
Trigger: CCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCAGCATATTCCAGGATaGTGCGGATGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKQHIPG*CGWSFS
Trigger: AGAGAAAGACCATCCGCACCATCCTGGAATATGCTG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCAATGGTATTGGGCTTaGGCACTCGGAGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGQWYWA*ALGEDA
Trigger: AGCATCCTCTCCGAGTGCCCAAGCCCAATACCATTG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGCTCGTAAGACACTTTaGAAGGATTGGATGCCACGA +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKARKTL*KDWMPR
Trigger: TCGTGGCATCCAATCCTTCCAAAGTGTCTTACGAGC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQNEHNV*NRPEQV
Trigger: GACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTT...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGGAAGCCCTGCTCAGTaGAGAAATGTGATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQGSPAQ*RNVMEA
Trigger: TGCCTCCATCACATTTCTCCACTGAGCAGGGCTTCC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTAGTAAAGAAACCAAGTaGGCTTGGTTCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFSKETK*AWFRGG
Trigger: GCCGCCTCTGAACCAAGCCCACTTGGTTTCTTTACT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATTATGCAAAACTAGTCTaGTGGACTGTGAAATTACCT +
Preference number: 4 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHYAKLV*WTVKLP
Trigger: AGGTAATTTCACAGTCCACCAGACTAGTTTTGCATA...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGCCTGTCTGGGGCGATaGAGGGCAGGGCCCAGTATG +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYACLGR*RAGPSM
Trigger: CATACTGGGCCCTGCCCTCCATCGCCCCAGACAGGC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCCGAGGGGAGGAGGATaGGGACTGACCTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFPRGGG*GLTYQP
Trigger: TGGCTGGTAGGTCAGTCCCCATCCTCCTCCCCTCGG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGCTCTGTTGCAAAACTTaGGCCCCTCCCAACCCAGAC +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMLCCKT*APPNPD
Trigger: GTCTGGGTTGGGAGGGGCCCAAGTTTTGCAACAGAG...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAAATTGTCTTCAGGCCTaGAATTACAGAGATAGTTTT +
Preference number: 4 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQNCLQA*NYRDSF
Trigger: AAAACTATCTCTGTAATTCCAGGCCTGAAGACAATT...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638820.1
CDS-3UTR CCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTGAACACAGAAATGGCTaGGGTGTTAACAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAEHRNG*GVNRSG
Trigger: CCCACTCCTGTTAACACCCCAGCCATTTCTGTGTTC...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATTTGGTGGTGGCTCCATaGCATTCTCATTCCATCCGG +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDLVVAP*HSHSIR
Trigger: CCGGATGGAATGAGAATGCCATGGAGCCACCACCAA...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGTTCAGACTTGGTCATTaGTGGTGGCTCCATGGCATT +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVFRLGH*WWLHGI
Trigger: AATGCCATGGAGCCACCACCAATGACCAAGTCTGAA...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGAGAAATGTTAGGAGATaGCTCTTCCCAAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVRNVRR*LFPKRG
Trigger: GCCCCTCTTTGGGAAGAGCCATCTCCTAACATTTCT...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
3UTR CAA 72 bp TCTACTGCAAGGCAGATCGGTGTGTCTGATTATGGGTaGGTTCTTCTTCCCCCTCTAGTGTATGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: STARQIGVSDYG*VLLPPLVYGSG
Trigger: TCCTGAACCATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCTTGCAGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQPLVVS*ACSQQC
Trigger: GCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATCCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDPLVVS*ACSQQC
Trigger: GCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGG...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGGATGTCCCCGTAGATaGAAGGCAAACTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIGCPRR*KANSSL
Trigger: CAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATAAGCCCTCAGTACCCTaGAAGTGCGTAGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: QNCSHRVKVPACQELCRNKPSVP*KCVELK
Trigger: TTTCAGCTCTACGCACTTTCAGGGTACTGAGGGCTT...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGCAGTGACTGATTCATaGTGGAAAATTTCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGAVTDS*WKISSL
Trigger: TAGGGAGGAAATTTTCCATCATGAATCAGTCACTGC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCACTCATTATACTGTTaGTTCTGTCCTTCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYHSLYC*FCPSAR
Trigger: ACGGGCGGAAGGACAGAATCAACAGTATAATGAGTG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCACTCATTATACTGTTaGTTCTGTCCTTCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFHSLYC*FCPSAR
Trigger: ACGGGCGGAAGGACAGAATCAACAGTATAATGAGTG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGGCGGGCACTTTCTCTaGGACTCTTCCAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIGGHFL*DSSSSS
Trigger: AGAAGAACTGGAAGAGTCTCAGAGAAAGTGCCCGCC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGGCGGGCACTTTCTCTaGGACTCTTCCAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTGGHFL*DSSSSS
Trigger: AGAAGAACTGGAAGAGTCTCAGAGAAAGTGCCCGCC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGGTGGCACTCCCAGATaGGGAAAGTGTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQGGTPR*GKCWQI
Trigger: AATTTGCCAACACTTTCCTCATCTGGGAGTGCCACC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTGCCCAGGGCACCCACTaGATTTCCAATAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPAQGTH*ISNNLD
Trigger: ATCAAGATTATTGGAAATTCAGTGGGTGCCCTGGGC...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTGCCCAGGGCACCCACTaGATTTCCAATAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFAQGTH*ISNNLD
Trigger: ATCAAGATTATTGGAAATTCAGTGGGTGCCCTGGGC...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAAGGCCACACCCTTCTTaGTACGGATCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRRPHPS*YGSLRS
Trigger: AGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGGACACAACCTTCTGTaGAGCAGGCATCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIGHNLL*SRHLDP
Trigger: TGGATCCAGATGCCTGCTTCACAGAAGGTTGTGTCC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATCACGTTCTTCCATCTaGTCTCTGTATTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQSRSSI*SLYCSP
Trigger: AGGGGAACAATACAGAGATCAGATGGAAGAACGTGA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCTCCATCTGCTTGCTTTaGGTGTCTGTCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGSICLL*VSVSTI
Trigger: GATGGTGGAGACAGACACTCAAAGCAAGCAGATGGA...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGCTTACAGTACTCAATaGACTGGGTGGCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSAYSTQ*TGWHRG
Trigger: ACCCCGATGCCACCCAGTTCATTGAGTACTGTAAGC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGCAGCCTGAAGAAACCTaGTTGTTTTCCCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVQPEET*LFSPTH
Trigger: ATGGGTGGGGGAAAACAATCAGGTTTCTTCAGGCTG...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGACTCATGCATGACTTCTaGTCACGGCATGCCATCATG +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRLMHDF*SRHAIM
Trigger: CATGATGGCATGCCGTGATCAGAAGTCATGCATGAG...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTCATGCATGACTTCTaGTCACGGCATGCCATCATG +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFLMHDF*SRHAIM
Trigger: CATGATGGCATGCCGTGATCAGAAGTCATGCATGAG...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATTTCTCCAAATACAGTaGACGGTGCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTFLQIQ*TVQGWV
Trigger: GACCCAGCCCTGCACCGTTCACTGTATTTGGAGAAA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCCCCATAACTCCCAATaGAAGGTCATTTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVPHNSQ*KVILSS
Trigger: GGAACTTAAAATGACCTTTCATTGGGAGTTATGGGG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGGACATGATACGAAATaGAATGAGCACCCCATAACT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVGHDTK*NEHPIT
Trigger: AGTTATGGGGTGCTCATTTCATTTCGTATCATGTCC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTGCAGATCGGTGTGTCTaGTTATGGGTTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPADRCV*LWVGSS
Trigger: AGAAGAACCAACCCATAATCAGACACACCGATCTGC...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTAGGCCCATGTGTTACTaGGGAGACAGCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFRPMCY*GDSLLG
Trigger: GCCCAGCAGGCTGTCTCCTCAGTAACACATGGGCCT...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCAAAAACGTCATCACTaGTTCTTTCAGTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPQKRHH*FFQFDA
Trigger: GGCATCGAACTGAAAGAATCAGTGATGACGTTTTTG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTCTCCAGTCAACTTCTaGCGCCAAAAGTGGCTCGTT +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFSPVNF*RQKWLV
Trigger: AACGAGCCACTTTTGGCGTCAGAAGTTGACTGGAGA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTCTCCAGTCAACTTCTaGCGCCAAAAGTGGCTCGTT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQSPVNF*RQKWLV
Trigger: AACGAGCCACTTTTGGCGTCAGAAGTTGACTGGAGA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTTTGGCTTAGAGGAGTaGTGGACTTTTTATCACGTC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPFGLEE*WTFYHV
Trigger: GACGTGATAAAAAGTCCATCACTCCTCTAAGCCAAA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCAAGTCACAAAGTCATaGCCCATGGCGATCTCACCT +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNQVTKS*PMAISP
Trigger: AGGTGAGATCGCCATGGGTCATGACTTTGTGACTTG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCATCAGGGCCTGGTGGTaGAAGCAGCCGCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPIRAWW*KQPRCH
Trigger: ATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGAT...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGCTTGCTCTCAGCAATaGGCCTCTCAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQACSQQ*ASQCLP
Trigger: TGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATGCTTGCTCTCAGCAATaGGCCTCTCAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QNCSHRVKVPACQELCRNACSQQ*ASQCLP
Trigger: TGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGC...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTTCCCCATGAACAGCTaGAGTCCGATCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYFPMNS*SPIKAK
Trigger: TTTTGCCTTGATCGGACTGCAGCTGTTCATGGGGAA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTTCCCCATGAACAGCTaGAGTCCGATCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFFPMNS*SPIKAK
Trigger: TTTTGCCTTGATCGGACTGCAGCTGTTCATGGGGAA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGTAAAGGTTCCAGCATaGCAGGAACTGTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGVKVPA*QELCRN
Trigger: ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTAC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCTTTCATACACTGGTATCCCTCTGGGCATTGCCCAGCATCAGAACTGTTCCGTAAAGGTTCCAGCATaGCAGGAACTGTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LLSYTGIPLGIAQHQNCSVKVPA*QELCRN
Trigger: ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTAC...GGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGTATCCCTCTGGGCATTaGCCAGCATCAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVYPSGH*PASELF
Trigger: GAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATA...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGTGTGCCTCTTCCTGTTaGTTCTTAAGTTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVCASSC*FLSCSN
Trigger: GTTGGAGCAACTTAAGAAGCAACAGGAAGAGGCACA...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCATCGCAGCAGCCTGTaGCTCTTCCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEHRSSL*LFLLLL
Trigger: AAGAAGCAACAGGAAGAGGCACAGGCTGCTGCGATG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTAGGCCTTCCTTCTCATaGCATCTTCTGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVARPSFS*HLLTLT
Trigger: AGTCAGAGTCAGAAGATGGCATGAGAAGGAAGGCCT...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCGCTCTCCTCCACCGTaGTGTGCTCGTCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSRSPPP*CARHPR
Trigger: TCGCGGATGACGAGCACAGCACGGTGGAGGAGAGCG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACAGTCCACCGTGCTGTTaGGCTTCACGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYSPPCC*ASRCAA
Trigger: TGCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAGTCCACCGTGCTGTTaGGCTTCACGCTGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSSPPCC*ASRCAA
Trigger: TGCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTAGGATGGTGCTCCATTaGCATAAACAGTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGRMVLH*HKQCIQ
Trigger: CTGAATACACTGTTTATGGCAATGGAGCACCATCCT...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGGTGTCATAGGATGGTaGTCCATTGCCATAAACAGT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKGVIGW*SIAINS
Trigger: ACTGTTTATGGCAATGGAGCACCATCCTATGACACC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGCCTGCATGAAGGCGTaGACCTTTAGTTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEACMKA*TFSLVQ
Trigger: CTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCTGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGCLKWA*MKACTF
Trigger: AAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCA...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQCLKWA*MKACTF
Trigger: AAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTATTCCGGTGGATGTCTaGACCGGTGTGATTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIIPVDV*TGVIGD
Trigger: ATCGCCAATCACACCGGTGCAGACATCCACCGGAAT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGGATCCACCAAGACTTaGCTAGCCCTTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTGSTKT*LALPRC
Trigger: ACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCAGCCTTTGAAGGTTaGTACTTGAAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFPAFEG*YLKKGQ
Trigger: CTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGG...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATGTTCTCCATCTGCTTaGTTTGAGTGTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQCSPSA*FECLSP
Trigger: TGGAGACAGACACTCAAAGCAAGCAGATGGAGAACA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTTACAAAGAAGAAGATaGCCACTGAGGGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYLQRRR*PLRGSH
Trigger: GTGGGAACCCCTCAGTGGGCATCTTCTTCTTTGTAA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTATGCTCCAAGGCATCTaGAAAGTCTGCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFMLQGI*KVCQLT
Trigger: TGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCAT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGGCACTCGGAGAGGATaGTCCAAGGCATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKGTRRG*SKASAK
Trigger: CTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTAIFSS*SSFVSY
Trigger: ATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGC...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVAIFSS*SSFVSY
Trigger: ATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGC...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGGGAGCGGGGTCCTTTaGCCTTGGCAGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSGSGVL*PWQVTA
Trigger: AGCAGTGACCTGCCAAGGGCAAAGGACCCCGCTCCC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCCCATGTGGAGAAGATaGGCTTTATGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVPMWRR*ALCQRN
Trigger: GTTTCTTTGACATAAAGCGCATCTTCTCCACATGGG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCCCATGTGGAGAAGATaGGCTTTATGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPPMWRR*ALCQRN
Trigger: GTTTCTTTGACATAAAGCGCATCTTCTCCACATGGG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAAATACAGTGAACGGTaGAGGGCTGGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIKYSER*RAGSCP
Trigger: TGGACAGGACCCAGCCCTGCACCGTTCACTGTATTT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTTCAAAGTGCTTCTACTaGAAGGCAGATCGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPSKCFY*KADRCV
Trigger: GACACACCGATCTGCCTTGCAGTAGAAGCACTTTGA...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCATTCTTTCAGTTCGATaGCTGTTAACTGCGGGTGTA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVILSVR*LLTAGV
Trigger: TACACCCGCAGTTAACAGGCATCGAACTGAAAGAAT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATATACTGTGGCTGCGCTaGTCTTTGATTGGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYILWLR*SLIGFV
Trigger: AACGAAGCCAATCAAAGAGCAGCGCAGCCACAGTAT...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGCCAGTAGTGGGGAATaGCACATGCAATGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIASSGE*HMQWVS
Trigger: ACTCACCCATTGCATGTGGCATTCCCCACTACTGGC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGCCAGTAGTGGGGAATaGCACATGCAATGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSASSGE*HMQWVS
Trigger: ACTCACCCATTGCATGTGGCATTCCCCACTACTGGC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCATCATTACAGAAGATaGCCAGGACTCAAGTCACAA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPHHYRR*PGLKSQ
Trigger: TTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGGGTGGTTGGAGCAGTaGAGTTTAAAATGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYGWLEQ*SLKWLS
Trigger: TGAGAGCCATTTTAAACTGCACTGCTCCAACCACCC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATTCCAGGTCGCTGTTTaGCTTGGGCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKFQVAV*LGLAVL
Trigger: GAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GATGCTGCTTTAGAATGGTGGACAAAACGAATGGAGGAGAAAGAGGAGATGTGGCTGCGTCAAATAGTATaGGTCAAAGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DAALEWWTKRMEEKEEMWLRQIV*VKVLQG
Trigger: CCCCTGGAGGACTTTGACCCATACTATTTGACGCAG...CCACATCTCCTCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATCTGCGTCAAATAGTATaGGTCAAAGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDLRQIV*VKVLQG
Trigger: CCCCTGGAGGACTTTGACCCATACTATTTGACGCAG...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CTGCTTTCATACACTGGTATCCCTCTGGGCATTGCCCAGCATCAGAACTGTTCCCCCAATCAAAGCCTTTaGTGCCATTTTCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: LLSYTGIPLGIAQHQNCSPNQSL*CHFQDS
Trigger: GCTATCTTGAAAATGGCACCAAAGGCTTTGATTGGG...GGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCGTGCACCTTTAGTTTaGTCCAGGCCACACCCTTCT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIRAPLV*SRPHPS
Trigger: AGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACGTGCACCTTTAGTTTaGTCCAGGCCACACCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTRAPLV*SRPHPS
Trigger: AGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCTGCACCGGTGTGATTaGCGATACAGTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTILHRCD*RYSWPS
Trigger: AGAAGGCCAACTGTATCGCCAATCACACCGGTGCAG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTACTCGCCCACAGCAATaGGTACCCGTACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTITRPQQ*VPVQSS
Trigger: ACTTGACTGTACGGGTACCCATTGCTGTGGGCGAGT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCAGCACTTGAACCGCTaGACACAACCTTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGQHLNR*TQPSVK
Trigger: CTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGGGGGCGGTTTAGGATaGGCAGCAGCAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNGGGLG*AAAGHP
Trigger: GGGATGGCCTGCTGCTGCCCATCCTAAACCGCCCCC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCAATGGTATTGGGCTTaGGCACTCGGAGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEQWYWA*ALGEDA
Trigger: AGCATCCTCTCCGAGTGCCCAAGCCCAATACCATTG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTCAATGGTATTGGGCTTaGGCACTCGGAGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSQWYWA*ALGEDA
Trigger: AGCATCCTCTCCGAGTGCCCAAGCCCAATACCATTG...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAATCCCCGCTCACCATTaGCAGATCCATAGCGATGAG +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTIPAHH*QIHSDE
Trigger: CTCATCGCTATGGATCTGCCAATGGTGAGCGGGGAT...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGTGTCCTGTGGTGTATaGATCTCATGCATGACTTCT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKVSCGV*ISCMTS
Trigger: AGAAGTCATGCATGAGATCCATACACCACAGGACAC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCAAAATGTGCAACAATaGCTGTATGTTAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSQNVQQ*LYVRDV
Trigger: GACATCTCTAACATACAGCCATTGTTGCACATTTTG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTGTCTCCCCCATGTACTaGACACAGAGCAGCATTAAA +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPVSPMY*TQSSIK
Trigger: TTTAATGCTGCTCTGTGTCCAGTACATGGGGGAGAC...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATAGTAAAGAAACCAAGTaGGCTTGGTTCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNSKETK*AWFRGG
Trigger: GCCGCCTCTGAACCAAGCCCACTTGGTTTCTTTACT...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTTTGGGGATGTACATTaGCTGACAGCATCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVFGDVH*LTASKF
Trigger: GAACTTAGATGCTGTCAGCCAATGTACATCCCCAAA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTTTGGGGATGTACATTaGCTGACAGCATCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGFGDVH*LTASKF
Trigger: GAACTTAGATGCTGTCAGCCAATGTACATCCCCAAA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTCAAATACAGCGGAGGTaGCTTCTTTCCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPQIQRR*LLSYEA
Trigger: AGCCTCATAGGAAAGAAGCCACCTCCGCTGTATTTG...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTTGTGCAGTGATACTGTaGCTGCGCTGCTCTTTGATT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPCAVIL*LRCSLI
Trigger: AATCAAAGAGCAGCGCAGCCACAGTATCACTGCACA...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTCTGTCCCTTTTCTaGAACCACTGGACCACACTC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQVLSLF*NHWTTL
Trigger: GAGTGTGGTCCAGTGGTTCCAGAAAAGGGACAGAAC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGTTCTGTCCCTTTTCTaGAACCACTGGACCACACTC +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNVLSLF*NHWTTL
Trigger: GAGTGTGGTCCAGTGGTTCCAGAAAAGGGACAGAAC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTTTCAGACTTGGTCATTaGTGGTGGCTCCATGGCATT +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAFRLGH*WWLHGI
Trigger: AATGCCATGGAGCCACCACCAATGACCAAGTCTGAA...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CCTGAGGACCCAACGGCCATTCCAGAGAATGTCTCCCAGGAAAAACATGCAGAAGATGCTGCTTTAGAATaGTGGACAAAACGAATGGAG +
Preference number: 4 (lower is better)
Translates to: PEDPTAIPENVSQEKHAEDAALE*WTKRME
Trigger: CTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATC...TTCTGCATGTTTTTCCTGGGAGACATTCTCTGGAATGGCCGTTGGGTCCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATACTGTGTTGCCAAGCTaGTCTCCAACTCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDTVLPS*SPTPGF
Trigger: GAAACCAGGAGTTGGAGACCAGCTTGGCAACACAGT...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR TCA 90 bp TGCAAGGCCATTATCAACTGTACTGATGCTGCTTTAGAATGGTGGACAAAACGATTCGAAGGTTCCCCATaGACAGCTGCAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: CKAIINCTDAALEWWTKRFEGSP*TAAVRS
Trigger: TGATCGGACTGCAGCTGTTCATGGGGAACCTTCGAA...TCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGTTCCTTTGCACTCTTTaGGCTGAGTTTAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWFLCTL*AEFRDF
Trigger: GAAATCTCTAAACTCAGCTCAAAGAGTGCAAAGGAA...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTATGCTGAGCAGTGACTaGTTCATGATGGAAAATTTC +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGMLSSD*FMMENF
Trigger: GAAATTTTCCATCATGAATCAGTCACTGCTCAGCAT...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTTGGGATGCTGAGCAGTaGCTGATTCATGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPWDAEQ*LIHDGK
Trigger: TTTTCCATCATGAATCAGTCACTGCTCAGCATCCCA...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGGTGGCACTCCCAGATaGGGAAAGTGTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEGGTPR*GKCWQI
Trigger: AATTTGCCAACACTTTCCTCATCTGGGAGTGCCACC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCTTGATACGGATCACTaGGATCTGGAGGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFLDTDH*DLEVVH
Trigger: ATGAACAACCTCCAGATCTCAGTGATCCGTATCAAG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTAGGCCACACCCTTCTTaGTACGGATCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSRPHPS*YGSLRS
Trigger: AGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAGGCCACACCCTTCTTaGTACGGATCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIRPHPS*YGSLRS
Trigger: AGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAATGTCTGCACCGGTGTaGTTGGCGATACAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SKLIFTFFHLISVLFPSIMSAPV*LAIQLA
Trigger: GGCCAACTGTATCGCCAATCACACCGGTGCAGACAT...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGTGTGGTCCTCATCAATaGTGTACTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMCGPHQ*CTSPRC
Trigger: GCAGCGTGGAGAAGTACATCATTGATGAGGACCACA...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCTTCTACTTCTGGTTTaGTATCAATGGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVLLLLV*YQWCFL
Trigger: AAGGAAGCACCATTGATATCAAACCAGAAGTAGAAG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTCACGTTCTTCCATCTaGTCTCTGTATTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFSRSSI*SLYCSP
Trigger: AGGGGAACAATACAGAGATCAGATGGAAGAACGTGA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTTGTCCATCCAGCCTTTaGAGGTTGCTACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPCPSSL*RLLLEE
Trigger: TTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGACA...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTCCATCTGCTTGCTTTaGGTGTCTGTCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSSICLL*VSVSTI
Trigger: GATGGTGGAGACAGACACTCAAAGCAAGCAGATGGA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGTGTTCCAGCCAATGGTaGAGTAGTAGTGCCTCAACG +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMCSSQW*SSSAST
Trigger: CGTTGAGGCACTACTACTTCACCATTGGCTGGAACA...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTGTTCCAGCCAATGGTaGAGTAGTAGTGCCTCAACG +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPECSSQW*SSSAST
Trigger: CGTTGAGGCACTACTACTTCACCATTGGCTGGAACA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCTACGGGCCAATCGGATaGCTCGGAATAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPYGPIG*LGIGLG
Trigger: CCCCAACCCTATTCCGAGTCATCCGATTGGCCCGTA...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTTCCCTTTGGCGCCTTTaGTCAGACGCAAGATGCGCC +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFSLWRL*SDARCA
Trigger: GGCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGA...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTCCCTTTGGCGCCTTTaGTCAGACGCAAGATGCGCC +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVSLWRL*SDARCA
Trigger: GGCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGA...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGCTTACAGTACTCAATaGACTGGGTGGCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKAYSTQ*TGWHRG
Trigger: ACCCCGATGCCACCCAGTTCATTGAGTACTGTAAGC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGACGCAGTGTGGTTGTaGTTGGCTCGTAAGACACTT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEDAVWL*LARKTL
Trigger: AAGTGTCTTACGAGCCAATCACAACCACACTGCGTC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGACGCAGTGTGGTTGTaGTTGGCTCGTAAGACACTT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTDAVWL*LARKTL
Trigger: AAGTGTCTTACGAGCCAATCACAACCACACTGCGTC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGTTGTCTTTTTGCAGATaGAGCCCCGCCTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVLSFCR*SPALPN
Trigger: ATTTGGCAAGGCGGGGCTTCATCTGCAAAAAGACAA...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACATCTCCAAACCACGTaGAGCCCATGTGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTHLQTT*SPCGED
Trigger: ATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCATCATTTCTACGCATTaGACGAGCACAATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVIISTH*TSTMFG
Trigger: TCCAAACATTGTGCTCGTTCAATGCGTAGAAATGAT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTTATGGATCTCATGCATaGCTTCTGATCACGGCATGC +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFYGSHA*LLITAC
Trigger: GCATGCCGTGATCAGAAGTCATGCATGAGATCCATA...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTATGGATCTCATGCATaGCTTCTGATCACGGCATGC +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFYGSHA*LLITAC
Trigger: GCATGCCGTGATCAGAAGTCATGCATGAGATCCATA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATTTCTCCAAATACAGTaGACGGTGCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKFLQIQ*TVQGWV
Trigger: GACCCAGCCCTGCACCGTTCACTGTATTTGGAGAAA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAAATCCAGTCATTAGGTaGGAAACCCCTGGACTAAAA +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTNPVIR*ETPGLK
Trigger: TTTTAGTCCAGGGGTTTCTCACCTAATGACTGGATT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGGGATGTACATTGGCTaGCAGCATCTAAGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYGMYIG*QHLSSK
Trigger: CTTAGAACTTAGATGCTGTCAGCCAATGTACATCCC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCATGACATCACTAGCATaGGCACATGGTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFMTSLA*AHGVLG
Trigger: GCCAAGTACACCATGTGCTCATGCTAGTGATGTCAT...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAGGCCCATGTGTTACTaGGGAGACAGCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSRPMCY*GDSLLG
Trigger: GCCCAGCAGGCTGTCTCCTCAGTAACACATGGGCCT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCAAAAACGTCATCACTaGTTCTTTCAGTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKQKRHH*FFQFDA
Trigger: GGCATCGAACTGAAAGAATCAGTGATGACGTTTTTG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTGGCTGCGCTGCTCTTTaGTTGGCTTCGTTAATATTT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFGCAAL*LASLIF
Trigger: AAATATTAACGAAGCCAATCAAAGAGCAGCGCAGCC...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGGGCAGGGCCCAGTATaGGCTTGCAGAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNGQGPV*ACRVEA
Trigger: AGCCTCCACTCTGCAAGCTCATACTGGGCCCTGCCC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACTGAGAGAGTGTTCCTaGACCAGGAGACATGGCCTA +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKLRECS*TRRHGL
Trigger: TAGGCCATGTCTCCTGGTTCAGGAACACTCTCTCAG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATACTGTGGGCAACATCTaGGAAAAGAAAGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYTVGNI*EKKEAS
Trigger: TGATGCCTCTTTCTTTTCTCAGATGTTGCCCACAGT...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAAACCCCAGAAGCAAGTaGAAGGAAAGACATTTTCTC +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTNPRSK*KERHFL
Trigger: GAGAAAATGTCTTTCCTTTCACTTGCTTCTGGGGTT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAACAAGTCGAGGAGGTaGGGGAAGGAGATACAGCAA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTINKSRR*GKEIQQ
Trigger: TTGCTGTATCTCCTTCCCTCACCTCCTCGACTTGTT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGCACCCTGACATCACATaGGCATTCCTCTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVHPDIT*AFLFRK
Trigger: TTTTCTAAAGAGGAATGCTCATGTGATGTCAGGGTG...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGCAGCTGAAGAGGGACTaGGGAAAGTTAGAAATTAGA +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVQLKRD*GKLEIR
Trigger: TCTAATTTCTAACTTTCCTCAGTCCCTCTTCAGCTG...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATATCAGGGCCTGGTGGTaGAAGCAGCCGCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNIRAWW*KQPRCH
Trigger: ATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGAT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGGCTTGCTCTCAGCAATaGGCCTCTCAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMACSQQ*ASQCLP
Trigger: TGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGC...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCGTCCTCCCGATGACTaGCATCGGCCTTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFRPPDD*HRPLVV
Trigger: AACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATTTCCCCATGAACAGCTaGAGTCCGATCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDFPMNS*SPIKAK
Trigger: TTTTGCCTTGATCGGACTGCAGCTGTTCATGGGGAA...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTTCCCCATGAACAGCTaGAGTCCGATCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQFPMNS*SPIKAK
Trigger: TTTTGCCTTGATCGGACTGCAGCTGTTCATGGGGAA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTATCCCTCTGGGCATTaGCCAGCATCAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSYPSGH*PASELF
Trigger: GAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTGTTGGGGTTCCTTCCTaGTTTCATACACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFVGVPS*FHTLVS
Trigger: GGATACCAGTGTATGAAAGCAGGAAGGAACCCCAAC...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTGGGGTTCCTTCCTaGTTTCATACACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQVGVPS*FHTLVS
Trigger: GGATACCAGTGTATGAAAGCAGGAAGGAACCCCAAC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GATGCTGCTTTAGAATGGTGGACAAAACGAATGGAGGAGAAAGAGGAGATGTGGGTTGGGGTTCCTTCCTaGTTTCATACACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: DAALEWWTKRMEEKEEMWVGVPS*FHTLVS
Trigger: GGATACCAGTGTATGAAAGCAGGAAGGAACCCCAAC...CCACATCTCCTCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTGTGCCTCTTCCTGTTaGTTCTTAAGTTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFCASSC*FLSCSN
Trigger: GTTGGAGCAACTTAAGAAGCAACAGGAAGAGGCACA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTTGTTGCGCTTCACGCTaGGCCGCAGGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPACCASR*AAGWGR
Trigger: TCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACA...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCGTTGCAGTCCACCGTaGTGTTGCGCTTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYRCSPP*CCASRC
Trigger: GCAGCGTGAAGCGCAACAGCACGGTGGACTGCAACG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGGTGTCATAGGATGGTaGTCCATTGCCATAAACAGT +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYGVIGW*SIAINS
Trigger: ACTGTTTATGGCAATGGAGCACCATCCTATGACACC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCACTTCTCCACGCTGCTaGCAATGCCGCTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFTSPRC*QCRWLC
Trigger: GCACAACCAGCGGCATTGGCAGCAGCGTGGAGAAGT...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTGTACTTCTCCACGCTaGTGCCAATGCCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSCTSPR*CQCRWL
Trigger: CAACCAGCGGCATTGGCAGCAGCGTGGAGAAGTACA...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCTAGTTTATCTTTGCTaGCTTCAGGATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQLVYLC*LQDPTR
Trigger: GCGAGTCGGATCCTGAAGGCAGCAAAGATAAACTAG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCATATTCCAGGATGGTaGGGATGGTCTTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFHIPGW*GWSFSA
Trigger: AGCAGAGAAAGACCATCCGCACCATCCTGGAATATG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCATATTCCAGGATGGTaGGGATGGTCTTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGHIPGW*GWSFSA
Trigger: AGCAGAGAAAGACCATCCGCACCATCCTGGAATATG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCCAGCCTTTGAAGGTTaGTACTTGAAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEPAFEG*YLKKGQ
Trigger: CTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGTCCTCATACTTAGGCTaGTCATCAGGCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMSSYLG*SSGFRE
Trigger: TTCCCGGAAGCCTGATGAGCAGCCTAAGTATGAGGA...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTCCTCATACTTAGGCTaGTCATCAGGCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTISSYLG*SSGFRE
Trigger: TTCCCGGAAGCCTGATGAGCAGCCTAAGTATGAGGA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTTTCTCAATTATATCTaGCAGGAACATTCCCACAAT +
Preference number: 4 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSFLNYI*QEHSHN
Trigger: ATTGTGGGAATGTTCCTGGCAGATATAATTGAGAAA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTTACAAAGAAGAAGATaGCCACTGAGGGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFLQRRR*PLRGSH
Trigger: GTGGGAACCCCTCAGTGGGCATCTTCTTCTTTGTAA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTGGCATCTGCAAAGTCTaGCAGCTTACAGTACTCAAT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPGICKV*QLTVLN
Trigger: ATTGAGTACTGTAAGCTGGCAGACTTTGCAGATGCC...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAATGCTCCAAGGCATCTaGAAAGTCTGCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRMLQGI*KVCQLT
Trigger: TGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCAT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTATGCTCCAAGGCATCTaGAAAGTCTGCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFMLQGI*KVCQLT
Trigger: TGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCAT...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTGTCCAAGCAGTGGATaGGATCCCCGCTCACCATTG +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLCPSSG*DPRSPL
Trigger: CAATGGTGAGCGGGGATCGCATCCACTGCTTGGACA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGAACCGCTCTTCCATCTaGTGCCGCAGGATGTCCAAC +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLNRSSI*CRRMSN
Trigger: GTTGGACATCCTGCGGCAGCAGATGGAAGAGCGGTT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGACGCTGCAGGACCACTaGAGATACCTCCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLTLQDH*RYLLLL
Trigger: AAGCAGGAGGAGGTATCTGCAGTGGTCCTGCAGCGT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTTTTCTCCCGGTGTGTaGCTCCATTCTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFFSPGV*LHSPAY
Trigger: ATAAGCTGGAGAATGGAGGCACACACCGGGAGAAAA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAAIFSS*SSFVSY
Trigger: ATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGC...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGATGCAAGCAGCCGCGCTaGCATCTTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRCKQPR*HLLILQ
Trigger: CTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCA...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGGGAGCGGGGTCCTTTaGCCTTGGCAGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNGSGVL*PWQVTA
Trigger: AGCAGTGACCTGCCAAGGGCAAAGGACCCCGCTCCC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAACCCATGTGGAGAAGATaGGCTTTATGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQPMWRR*ALCQRN
Trigger: GTTTCTTTGACATAAAGCGCATCTTCTCCACATGGG...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGGGTGTATGGATCTCATaGATGACTTCTGATCACGGC +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVGVWIS*MTSDHG
Trigger: GCCGTGATCAGAAGTCATGCATGAGATCCATACACC...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATCAAAGTGCTTCTACTaGAAGGCAGATCGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRSKCFY*KADRCV
Trigger: GACACACCGATCTGCCTTGCAGTAGAAGCACTTTGA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATTTCTACGGATGCTGCTaGAGAAGCAGGCTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNFYGCC*RSRLKR
Trigger: TCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAA...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCAAAAATTCTACGGATaGTGCTGCAGAAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFQKFYG*CCRSRL
Trigger: AAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTCGATGCCTGTTAACTaGGGGTGTAAACTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSSMPVN*GCKLLV
Trigger: CACCAGCAGTTTACACCCGCAGTTAACAGGCATCGA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAATACTGTGGCTGCGCTaGTCTTTGATTGGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRILWLR*SLIGFV
Trigger: AACGAAGCCAATCAAAGAGCAGCGCAGCCACAGTAT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGGGTGGTTGGAGCAGTaGAGTTTAAAATGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGGWLEQ*SLKWLS
Trigger: TGAGAGCCATTTTAAACTGCACTGCTCCAACCACCC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTGCCCTTTACAGTCTCTaGAGGTCCCAGAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSALYSL*RSQKSP
Trigger: TGGGGACTTCTGGGACCTGCAGAGACTGTAAAGGGC...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548086.3
CDS-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTCTCCTTGCCTGGCTCTaGTGGCACACACCTCCCACC +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPALLAWL*WHTPPT
Trigger: GGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAG...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTGAAACTATCAGGGCCTaGTGGTGCAAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLETIRA*WCKQPR
Trigger: GCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTC...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGCCATCGGCCTTTGGTaGTTTCTTGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKAIGLW*FLELAL
Trigger: GAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCAAGGCCATTATCAACTGTACTGATGCTGCTTTAGAATGGTGGACAAAACGAGCCATCGGCCTTTGGTaGTTTCTTGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CKAIINCTDAALEWWTKRAIGLW*FLELAL
Trigger: GAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC...TCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp GGTGCCATTTTCAAGATAGCTCTCGTTGAAGTTTATGGGCCACACAACACACTTACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GAIFKIALVEVYGPHNTLTAIGL*WFLELA
Trigger: AGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGT...AAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACTGCGTCAAATAGTATaGGTCAAAGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTLRQIV*VKVLQG
Trigger: CCCCTGGAGGACTTTGACCCATACTATTTGACGCAG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCTGCGTCAAATAGTATaGGTCAAAGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTILRQIV*VKVLQG
Trigger: CCCCTGGAGGACTTTGACCCATACTATTTGACGCAG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCTCAGTTGTAGCCTCTaGCAGGAGACGCCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYLSCSL*QETPAD
Trigger: ATCGGCGGGCGTCTCCTGCCAGAGGCTACAACTGAG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGACATGTTCAAATTGTaGTGTCATAGGATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKDMFKL*CHRMVL
Trigger: GAGCACCATCCTATGACACCACAATTTGAACATGTC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCGGATCACTGAGATCTaGAGGTTGTTCATTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQRITEI*RLFISP
Trigger: TGGGGAAATGAACAACCTCCAGATCTCAGTGATCCG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSSRCLK*ACMKAC
Trigger: GCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGA...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGATTGGCGATACAGTTaGCCTTCTTTTCATACAACT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPDWRYS*PSFHTT
Trigger: AGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGATTGGCGATACAGTTaGCCTTCTTTTCATACAACT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVDWRYS*PSFHTT
Trigger: AGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGACCTCTTCTACTTCTaGTTTGATATCAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPDLFYF*FDINGA
Trigger: AGCACCATTGATATCAAACCAGAAGTAGAAGAGGTC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACAGCACTTGAACCGCTaGACACAACCTTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTQHLNR*TQPSVK
Trigger: CTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGCAGCATATTCCAGGATaGTGCGGATGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVQHIPG*CGWSFS
Trigger: AGAGAAAGACCATCCGCACCATCCTGGAATATGCTG...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTCAAAGACGATTCCTTaGATTTTGTTCAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFSKTIP*ILFKGR
Trigger: CCGCCCCTTGAACAAAATCCAAGGAATCGTCTTTGA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTAGGATGTCCAAGCAGTaGATGCGATCCCCGCTCACC +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFRMSKQ*MRSPLT
Trigger: GGTGAGCGGGGATCGCATCCACTGCTTGGACATCCT...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGCACGTGAAGCCCATGTaGAGAAGATGCGCTTTATGT +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVHVKPM*RRCALC
Trigger: ACATAAAGCGCATCTTCTCCACATGGGCTTCACGTG...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCACGTGAAGCCCATGTaGAGAAGATGCGCTTTATGT +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGHVKPM*RRCALC
Trigger: ACATAAAGCGCATCTTCTCCACATGGGCTTCACGTG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCATTAGTAGTGTCCTGTaGTGTATGGATCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVISSVL*CMDLMH
Trigger: ATGCATGAGATCCATACACCACAGGACACTACTAAT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGTCTCCCCCATGTACTaGACACAGAGCAGCATTAAA +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGVSPMY*TQSSIK
Trigger: TTTAATGCTGCTCTGTGTCCAGTACATGGGGGAGAC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAATAGTACAAGCCATTTaGGATCAAAGTCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQIVQAI*DQSLPH
Trigger: ATGGGGGAGACTTTGATCCCAAATGGCTTGTACTAT...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGTCTGTCTGTCTGGTTTaGGGATGTACATTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVSVCLV*GCTLAD
Trigger: GTCAGCCAATGTACATCCCCAAACCAGACAGACAGA...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTAGCACATGGTGTACTTaGCGGGATCTTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSSTWCT*RDLTAL
Trigger: CAGAGCTGTAAGATCCCGCCAAGTACACCATGTGCT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGACTAGCATGAGCACATaGTGTACTTGGCGGGATCTT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQTSMST*CTWRDL
Trigger: AAGATCCCGCCAAGTACACCATGTGCTCATGCTAGT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCAAATACAGCGGAGGTaGCTTCTTTCCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGQIQRR*LLSYEA
Trigger: AGCCTCATAGGAAAGAAGCCACCTCCGCTGTATTTG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCAAATACAGCGGAGGTaGCTTCTTTCCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQQIQRR*LLSYEA
Trigger: AGCCTCATAGGAAAGAAGCCACCTCCGCTGTATTTG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCTTAAAAGGTGGATTGTaGAGTATAAATACTGCACCA +
Preference number: 4 (lower is better)
Translates to: REVLWASKHRPVVGNATCLKGGL*SINTAP
Trigger: TGGTGCAGTATTTATACTCCACAATCCACCTTTTAA...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTTTAGGGGCTTTGACTaGGAGTTTGTTTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPFRGFD*EFVYLS
Trigger: AGAGAGATAAACAAACTCCCAGTCAAAGCCCCTAAA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCCAGGACTCAAGAATTaGGATAGTCAAGCAACAAAC +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKPGLKN*DSQATN
Trigger: GTTTGTTGCTTGACTATCCCAATTCTTGAGTCCTGG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTCCAGTCCAGCTGGGTTaGCTGACGTCATCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPPVQLG*LTSSLR
Trigger: CCTCAGAGATGACGTCAGCCAACCCAGCTGGACTGG...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATATGAGCTTGCAGAGTaGAGGCTGTTGGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKYELAE*RLLGIA
Trigger: TGCGATGCCCAACAGCCTCCACTCTGCAAGCTCATA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTGGAGCGGACTAGAGTaGGCACTTCGAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLWSGLE*ALRDPP
Trigger: AGGAGGATCTCGAAGTGCCCACTCTAGTCCGCTCCA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CAA 72 bp ACAGCAATGGGTACCCGTACAGTCAAGTTGGGGTTGTaGATGAAGGACATGTGGTCCTCATCAATGATGTAC +
Preference number: 4 (lower is better)
Translates to: TAMGTRTVKLGL*MKDMWSSSMMY
Trigger: GTACATCATTGATGAGGACCACATGTCCTTCATCAACAACCCCAACTTGACTGTACGGGTACCCATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAA +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFQDSSR*SLWATQ
Trigger: TTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATCAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAA +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDQDSSR*SLWATQ
Trigger: TTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTG...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAA +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGQDSSR*SLWATQ
Trigger: TTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAA +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQQDSSR*SLWATQ
Trigger: TTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCTGGGATGCTGAGCAGTaGCTGATTCATGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGWDAEQ*LIHDGK
Trigger: TTTTCCATCATGAATCAGTCACTGCTCAGCATCCCA...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACACTCATTATACTGTTaGTTCTGTCCTTCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTHSLYC*FCPSAR
Trigger: ACGGGCGGAAGGACAGAATCAACAGTATAATGAGTG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGCCCAGGGCACCCACTaGATTTCCAATAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTAQGTH*ISNNLD
Trigger: ATCAAGATTATTGGAAATTCAGTGGGTGCCCTGGGC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCTTCTACTTCTGGTTTaGTATCAATGGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKLLLLV*YQWCFL
Trigger: AAGGAAGCACCATTGATATCAAACCAGAAGTAGAAG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCGGACACAACCTTCTGTaGAGCAGGCATCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSGHNLL*SRHLDP
Trigger: TGGATCCAGATGCCTGCTTCACAGAAGGTTGTGTCC...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATCACGTTCTTCCATCTaGTCTCTGTATTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRSRSSI*SLYCSP
Trigger: AGGGGAACAATACAGAGATCAGATGGAAGAACGTGA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTTGAAGGTTGCTACTTaGAGAAGGGCCAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPELKVAT*RRARYP
Trigger: AGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTGTCCATCCAGCCTTTaGAGGTTGCTACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQCPSSL*RLLLEE
Trigger: TTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGACA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTCCCTTTGGCGCCTTTaGTCAGACGCAAGATGCGCC +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPSLWRL*SDARCA
Trigger: GGCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTCCCTTTGGCGCCTTTaGTCAGACGCAAGATGCGCC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSSLWRL*SDARCA
Trigger: GGCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTTGTCTTTTTGCAGATaGAGCCCCGCCTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPELSFCR*SPALPN
Trigger: ATTTGGCAAGGCGGGGCTTCATCTGCAAAAAGACAA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTTGTCTTTTTGCAGATaGAGCCCCGCCTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTILSFCR*SPALPN
Trigger: ATTTGGCAAGGCGGGGCTTCATCTGCAAAAAGACAA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCTAAGTTGCATTGACTaGTGTGGAACATGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFLSCID*CGTCSN
Trigger: GTTACTGCATGTTCCACATCAGTCAATGCAACTTAG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATGTCCTAAGTTGCATTaGCTGATGTGGAACATGCAG +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRCPKLH*LMWNMQ
Trigger: CTGCATGTTCCACATCAGTCAATGCAACTTAGGACA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCAACGAACTTTTAAAGTaGTGCTTTCTGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPNELLK*CFLLLR
Trigger: TCTCAGAAGCAGAAAGCATCACTTTAAAAGTTCGTT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACAGCCTGAAGAAACCTaGTTGTTTTCCCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKQPEET*LFSPTH
Trigger: ATGGGTGGGGGAAAACAATCAGGTTTCTTCAGGCTG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAATCATTTCTACGCATTaGACGAGCACAATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQIISTH*TSTMFG
Trigger: TCCAAACATTGTGCTCGTTCAATGCGTAGAAATGAT...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTATGGATCTCATGCATaGCTTCTGATCACGGCATGC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIYGSHA*LLITAC
Trigger: GCATGCCGTGATCAGAAGTCATGCATGAGATCCATA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTTCCTATGAGGCTGGCTaGTGGGTGCCAGATACCAAG +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPSYEAG*WVPDTK
Trigger: CTTGGTATCTGGCACCCATCAGCCAGCCTCATAGGA...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATTATATATATGTGCAGTaGTACTGTGGCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNYIYVQ*YCGCAA
Trigger: AGCAGCGCAGCCACAGTATCACTGCACATATATATA...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATACTGTGGGCAACATCTaGGAAAAGAAAGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNTVGNI*EKKEAS
Trigger: TGATGCCTCTTTCTTTTCTCAGATGTTGCCCACAGT...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCTTCCTCTTCTCTCCTaGTGTCCCCCTGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPLPLLS*CPPGWQ
Trigger: TTGCCAGCCAGGGGGACATCAGGAGAGAAGAGGAAG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATGGAACACAAATTCTCTaGACCTTCTCCCCATCTCAA +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDGTQIL*TFSPSQ
Trigger: TTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCC...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTTCCCCATGAACAGCTaGAGTCCGATCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEFPMNS*SPIKAK
Trigger: TTTTGCCTTGATCGGACTGCAGCTGTTCATGGGGAA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCAATCAAAGCCTTTGGTaGCATTTTCAAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPNQSLW*HFQDSS
Trigger: AGAGCTATCTTGAAAATGGCACCAAAGGCTTTGATT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGAATCAAAGCCTTTGGTaGCATTTTCAAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWNQSLW*HFQDSS
Trigger: AGAGCTATCTTGAAAATGGCACCAAAGGCTTTGATT...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTGTAAAGGTTCCAGCATaGCAGGAACTGTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAVKVPA*QELCRN
Trigger: ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTAC...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTTGTGCCTCTTCCTGTTaGTTCTTAAGTTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFCASSC*FLSCSN
Trigger: GTTGGAGCAACTTAAGAAGCAACAGGAAGAGGCACA...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTAGGCCTTCCTTCTCATaGCATCTTCTGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSRPSFS*HLLTLT
Trigger: AGTCAGAGTCAGAAGATGGCATGAGAAGGAAGGCCT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAAGGCCTTCCTTCTCATaGCATCTTCTGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTRPSFS*HLLTLT
Trigger: AGTCAGAGTCAGAAGATGGCATGAGAAGGAAGGCCT...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGAGGCCTTCCTTCTCATaGCATCTTCTGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPERPSFS*HLLTLT
Trigger: AGTCAGAGTCAGAAGATGGCATGAGAAGGAAGGCCT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTCCTCCACCGTGCTGTaGTCGTCATCCGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSSSTVL*SSSANS
Trigger: TGAGTTCGCGGATGACGAGCACAGCACGGTGGAGGA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTCGTTGCAGTCCACCGTaGTGTTGCGCTTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPARCSPP*CCASRC
Trigger: GCAGCGTGAAGCGCAACAGCACGGTGGACTGCAACG...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAGCCTGCATGAAGGCGTaGACCTTTAGTTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SKLIFTFFHLISVLFPSIACMKA*TFSLVQ
Trigger: CTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGC...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCGCCTGCATGAAGGCGTaGACCTTTAGTTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSACMKA*TFSLVQ
Trigger: CTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGC...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTCATCAGCCTCACGCTaGTTAAAGTGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLSSASR*LKWACM
Trigger: CATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTATTCCGGTGGATGTCTaGACCGGTGTGATTGGCGAT +
Preference number: 4 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSIPVDV*TGVIGD
Trigger: ATCGCCAATCACACCGGTGCAGACATCCACCGGAAT...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCATTCCGGTGGATGTCTaGACCGGTGTGATTGGCGAT +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSIPVDV*TGVIGD
Trigger: ATCGCCAATCACACCGGTGCAGACATCCACCGGAAT...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACAATGCCGCTGGTTGTaGCATTGCCATTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKQCRWL*HCHSSG
Trigger: TCCAGAAGAATGGCAATGGCACAACCAGCGGCATTG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCCACGCTGCTGCCAATaGCGCTGGTTGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNPRCCQ*RWLCHC
Trigger: GCAATGGCACAACCAGCGGCATTGGCAGCAGCGTGG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCACTTCTCCACGCTGCTaGCAATGCCGCTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSTSPRC*QCRWLC
Trigger: GCACAACCAGCGGCATTGGCAGCAGCGTGGAGAAGT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTTGTACTTCTCCACGCTaGTGCCAATGCCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFCTSPR*CQCRWL
Trigger: CAACCAGCGGCATTGGCAGCAGCGTGGAGAAGTACA...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCTAGTTTATCTTTGCTaGCTTCAGGATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPELVYLC*LQDPTR
Trigger: GCGAGTCGGATCCTGAAGGCAGCAAAGATAAACTAG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCATCTAGTTTATCTTTaGTGCCTTCAGGATCCGACT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFHLVYL*CLQDPT
Trigger: AGTCGGATCCTGAAGGCAGCAAAGATAAACTAGATG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATCCAGCCTTTGAAGGTTaGTACTTGAAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VKVDLHVLPSDLCIVPLHPAFEG*YLKKGQ
Trigger: CTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGG...ATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTTGTCCAAGCAGTGGATaGGATCCCCGCTCACCATTG +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPCPSSG*DPRSPL
Trigger: CAATGGTGAGCGGGGATCGCATCCACTGCTTGGACA...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCGCTCTTCCATCTGCTaGCGCAGGATGTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSRSSIC*RRMSNS
Trigger: GGAGTTGGACATCCTGCGGCAGCAGATGGAAGAGCG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCGCTCTTCCATCTGCTaGCGCAGGATGTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYRSSIC*RRMSNS
Trigger: GGAGTTGGACATCCTGCGGCAGCAGATGGAAGAGCG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCACGGCATGCCATCATaGAAATCATTTCTACGCATT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFHGMPS*KSFLRI
Trigger: AATGCGTAGAAATGATTTGCATGATGGCATGCCGTG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCCTGACACATTCAACTaGAGCATCTTGGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYPDTFN*SILALK
Trigger: TTTCAAAGCCAAGATGCTGCAGTTGAATGTGTCAGG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCAAGATAGAAAGCTCTaGTTGCCGACTTACTGTGGT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQQDRKL*LPTYCG
Trigger: ACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCAAGATAGAAAGCTCTaGTTGCCGACTTACTGTGGT +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFQDRKL*LPTYCG
Trigger: ACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTG...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCAAGATAGAAAGCTCTaGTTGCCGACTTACTGTGGT +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFQDRKL*LPTYCG
Trigger: ACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTAAATTCTACGGATGCTaGTGCAGAAGCAGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFKFYGC*CRSRLK
Trigger: CTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTT...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCATCTATATATATATGTaGAGTGATACTGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPIYIYM*SDTVAA
Trigger: CGCAGCCACAGTATCACTGCACATATATATATAGAT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAGTGGAGTATAAATACTaGACCAAGGACCTGGCTACA +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRVEYKY*TKDLAT
Trigger: TGTAGCCAGGTCCTTGGTGCAGTATTTATACTCCAC...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGTGGAGTATAAATACTaGACCAAGGACCTGGCTACA +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFVEYKY*TKDLAT
Trigger: TGTAGCCAGGTCCTTGGTGCAGTATTTATACTCCAC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGCCTCCTCTCGTCCTCTaGTTTAAATTACAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVPPLVL*FKLQSL
Trigger: GAGACTCTGTAATTTAAAGCAGAGGACGAGAGGAGG...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCGTTGGGCATCGCACATaGCCTAGCTTTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPVGHRT*PSFGAQ
Trigger: CTGTGCCCCAAAGCTAGGGCATGTGCGATGCCCAAC...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTAAGGAAGAGGAAGCGTaGCCCCACCCCCACACAAAT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFKEEEA*PHPHTN
Trigger: ATTTGTGTGGGGGTGGGGGCACGCTTCCTCTTCCTT...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCAAACTCTGTCACATATaGCATCATGATGACACTGAA +
Preference number: 4 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPKLCHI*HHDDTE
Trigger: TTCAGTGTCATCATGATGGCATATGTGACAGAGTTT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGAGCACATCTCATTCTTaGAGAGGAGACTTAGAACAT +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVSTSHS*RGDLEH
Trigger: ATGTTCTAAGTCTCCTCTGCAAGAATGAGATGTGCT...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTAATTGTCTTCAGGCCTaGGATTACCGAAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGNCLQA*DYRNSF
Trigger: AAAACTATTTCGGTAATCCCAGGCCTGAAGACAATT...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354534.11
ENST00000545061.5
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCAATTGTCTTCAGGCCTaGGATTACCGAAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVNCLQA*DYRNSF
Trigger: AAAACTATTTCGGTAATCCCAGGCCTGAAGACAATT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354534.11
ENST00000545061.5
CDS-3UTR CCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCAATCAAAGCCTTTaGTGCCATTTTCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFPNQSL*CHFQDS
Trigger: GCTATCTTGAAAATGGCACCAAAGGCTTTGATTGGG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGCCCTATTCTGTTGTCTaGCAGCCGAAAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLPYSVV*QPKGLP
Trigger: AGGAAGGCCTTTCGGCTGCCAGACAACAGAATAGGG...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACGGATCACTGAGATCTaGAGGTTGTTCATTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTRITEI*RLFISP
Trigger: TGGGGAAATGAACAACCTCCAGATCTCAGTGATCCG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTTCACGCTGCTTAAAGTaGGCCTGCATGAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFSRCLK*ACMKAC
Trigger: GCACGCCTTCATGCAGGCCCACTTTAAGCAGCGTGA...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAGATTGGCGATACAGTTaGCCTTCTTTTCATACAACT +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTDWRYS*PSFHTT
Trigger: AGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATC...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATACTGCACCGGTGTGATTaGCGATACAGTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SKLIFTFFHLISVLFPSILHRCD*RYSWPS
Trigger: AGAAGGCCAACTGTATCGCCAATCACACCGGTGCAG...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCTCCTCGATGTTGACCTaGCAGCACTTGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFSSMLT*QHLNRW
Trigger: CCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGA...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTTCCTCGATGTTGACCTaGCAGCACTTGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFSSMLT*QHLNRW
Trigger: CCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGA...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCAGCATATTCCAGGATaGTGCGGATGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIQHIPG*CGWSFS
Trigger: AGAGAAAGACCATCCGCACCATCCTGGAATATGCTG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTCAAAGACGATTCCTTaGATTTTGTTCAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQSKTIP*ILFKGR
Trigger: CCGCCCCTTGAACAAAATCCAAGGAATCGTCTTTGA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGGCTCGTAAGACACTTTaGAAGGATTGGATGCCACGA +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMARKTL*KDWMPR
Trigger: TCGTGGCATCCAATCCTTCCAAAGTGTCTTACGAGC...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGCAACGGAAATATGCTaGTCCCGGCAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFATEIC*SRQPLF
Trigger: GAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACACGTGAAGCCCATGTaGAGAAGATGCGCTTTATGT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTHVKPM*RRCALC
Trigger: ACATAAAGCGCATCTTCTCCACATGGGCTTCACGTG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGTGTCCTGTGGTGTATaGATCTCATGCATGACTTCT +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNVSCGV*ISCMTS
Trigger: AGAAGTCATGCATGAGATCCATACACCACAGGACAC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCAAAATGTGCAACAATaGCTGTATGTTAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVQNVQQ*LYVRDV
Trigger: GACATCTCTAACATACAGCCATTGTTGCACATTTTG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATATAGTACAAGCCATTTaGGATCAAAGTCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYIVQAI*DQSLPH
Trigger: ATGGGGGAGACTTTGATCCCAAATGGCTTGTACTAT...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGCAAAACTAGTCTGGTaGACTGTGAAATTACCTTCA +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQAKLVW*TVKLPS
Trigger: TGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACACTTGCCGACTTACTGTaGTTTGTTCTATGCAAAACT +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTLADLL*FVLCKT
Trigger: AGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAG...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTACTAGCATGAGCACATaGTGTACTTGGCGGGATCTT +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSTSMST*CTWRDL
Trigger: AAGATCCCGCCAAGTACACCATGTGCTCATGCTAGT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTATGAGCTTGCAGAGTaGAGGCTGTTGGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLYELAE*RLLGIA
Trigger: TGCGATGCCCAACAGCCTCCACTCTGCAAGCTCATA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTCAATAGCATGGATGGAATGGGGGCTGCATGCCTGGCAAGCACTCAGAGAAAAGAGAAAGAGGAGATGTaGCAAAGTCAGTCTTATGTA +
Preference number: 4 (lower is better)
Translates to: FNSMDGMGAACLASTQRKEKEEM*QSQSYV
Trigger: TACATAAGACTGACTTTGCCACATCTCCTCTTTCTC...TTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCATTCCATCCATGCTATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp CTGCTTTCATACACTGGTATCCCTCTGGGCATTGCCCAGCATCAGAACTGTTCCACTGGATTAGTTAACTaGGTAGATCTCTTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LLSYTGIPLGIAQHQNCSTGLVN*VDLFCD
Trigger: ATCACAGAAGAGATCTACCCAGTTAACTAATCCAGT...GGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp GGTGCCATTTTCAAGATAGCTCTCGTTGAAGTTTATGGGCCACACAACACACTTAAGGTTAAGAACCACTaGGCTAGCTCAACCAGAACC +
Preference number: 4 (lower is better)
Translates to: GAIFKIALVEVYGPHNTLKVKNH*ASSTRT
Trigger: GGTTCTGGTTGAGCTAGCCCAGTGGTTCTTAACCTT...AAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATACCATGTTGGCCAGCCTaGTCTCAAACTCCAGACCTC +
Preference number: 4 (lower is better)
Translates to: TQRNTNSLNLLPISKTEIPCWPA*SQTPDL
Trigger: GAGGTCTGGAGTTTGAGACCAGGCTGGCCAACATGG...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667214.1
3UTR CAA 72 bp ATCACGGCATGCCATCATGCAAATCATTTCTACGCATaGAACGAGCACAATGTTTGGAATCGGCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: ITACHHANHFYA*NEHNVWNRPEQ
Trigger: TTGCTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATGATGGCATGCCGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTTCATCGTCCTCCCGATaGCTGCCATCGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPASSSSR*LPSAFG
Trigger: ACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGA...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGAGGATGTCCCCGTAGATaGAAGGCAAACTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRGCPRR*KANSSL
Trigger: CAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCC...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTATGTATAAATCCCTGTaGACGTGTACTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPMYKSL*TCTPHS
Trigger: AGAATGTGGAGTACACGTTCACAGGGATTTATACAT...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATAAGAACCCACAAAGATaGCCAAGACGAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNKNPQR*PRRRRS
Trigger: TGATCTTCTTCGTCTTGGTCATCTTTGTGGGTTCTT...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTTCCTTTGCACTCTTTaGGCTGAGTTTAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYFLCTL*AEFRDF
Trigger: GAAATCTCTAAACTCAGCTCAAAGAGTGCAAAGGAA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGCAGTGACTGATTCATaGTGGAAAATTTCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQAVTDS*WKISSL
Trigger: TAGGGAGGAAATTTTCCATCATGAATCAGTCACTGC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTGGGATGCTGAGCAGTaGCTGATTCATGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIWDAEQ*LIHDGK
Trigger: TTTTCCATCATGAATCAGTCACTGCTCAGCATCCCA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTGGGATGCTGAGCAGTaGCTGATTCATGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSWDAEQ*LIHDGK
Trigger: TTTTCCATCATGAATCAGTCACTGCTCAGCATCCCA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACACTCATTATACTGTTaGTTCTGTCCTTCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKHSLYC*FCPSAR
Trigger: ACGGGCGGAAGGACAGAATCAACAGTATAATGAGTG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCGAAAGATCGCAGCACTaGAAGCCCCTCCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSERSQH*KPLHVC
Trigger: GCAGACGTGGAGGGGCTTTCAGTGCTGCGATCTTTC...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCTTGATACGGATCACTaGGATCTGGAGGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPELDTDH*DLEVVH
Trigger: ATGAACAACCTCCAGATCTCAGTGATCCGTATCAAG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACATGTCTGCACCGGTGTaGTTGGCGATACAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYMSAPV*LAIQLA
Trigger: GGCCAACTGTATCGCCAATCACACCGGTGCAGACAT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATCACGTTCTTCCATCTaGTCTCTGTATTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTSRSSI*SLYCSP
Trigger: AGGGGAACAATACAGAGATCAGATGGAAGAACGTGA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATGTCCATCCAGCCTTTaGAGGTTGCTACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTCPSSL*RLLLEE
Trigger: TTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGACA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCTCCATCTGCTTGCTTTaGGTGTCTGTCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSSICLL*VSVSTI
Trigger: GATGGTGGAGACAGACACTCAAAGCAAGCAGATGGA...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTGTTCCAGCCAATGGTaGAGTAGTAGTGCCTCAACG +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLCSSQW*SSSAST
Trigger: CGTTGAGGCACTACTACTTCACCATTGGCTGGAACA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTACGGGCCAATCGGATaGCTCGGAATAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNYGPIG*LGIGLG
Trigger: CCCCAACCCTATTCCGAGTCATCCGATTGGCCCGTA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGAAGAAGATGCCCACTaGGGGGTTCCCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSEEDAH*GVPTIS
Trigger: GGAGATTGTGGGAACCCCTCAGTGGGCATCTTCTTC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTCTTCGGTCATGAAGATGTCCTGACCTCCGAACTTTTTCTTTTGTTGATTGAAGCTTACAGTACTCAATaGACTGGGTGGCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: FFGHEDVLTSELFLLLIEAYSTQ*TGWHRG
Trigger: ACCCCGATGCCACCCAGTTCATTGAGTACTGTAAGC...TTCAATCAACAAAAGAAAAAGTTCGGAGGTCAGGACATCTTCATGACCGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATGTCCTAAGTTGCATTaGCTGATGTGGAACATGCAG +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTCPKLH*LMWNMQ
Trigger: CTGCATGTTCCACATCAGTCAATGCAACTTAGGACA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTGTCCTAAGTTGCATTaGCTGATGTGGAACATGCAG +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTICPKLH*LMWNMQ
Trigger: CTGCATGTTCCACATCAGTCAATGCAACTTAGGACA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAGGACATGATACGAAATaGAATGAGCACCCCATAACT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRGHDTK*NEHPIT
Trigger: AGTTATGGGGTGCTCATTTCATTTCGTATCATGTCC...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGGACATGATACGAAATaGAATGAGCACCCCATAACT +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNGHDTK*NEHPIT
Trigger: AGTTATGGGGTGCTCATTTCATTTCGTATCATGTCC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTAATCCAGTCATTAGGTaGGAAACCCCTGGACTAAAA +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFNPVIR*ETPGLK
Trigger: TTTTAGTCCAGGGGTTTCTCACCTAATGACTGGATT...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGTGTATAGAGACTTCCTaGCACATTCAACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVCIETS*HIQLQH
Trigger: ATGCTGCAGTTGAATGTGTCAGGAAGTCTCTATACA...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGGCTGCGCTGCTCTTTaGTTGGCTTCGTTAATATTT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEGCAAL*LASLIF
Trigger: AAATATTAACGAAGCCAATCAAAGAGCAGCGCAGCC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTATATATATGTGCAGTaGTACTGTGGCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEYIYVQ*YCGCAA
Trigger: AGCAGCGCAGCCACAGTATCACTGCACATATATATA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCCCCACACAAATGTaGAGGAGACCAGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNTPTQM*RRPALV
Trigger: GACGAGGGCTGGTCTCCTTCACATTTGTGTGGGGGT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGACTTCGAGATCCTCCTaGGAGAGTGTTCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLTSRSS*ESVPEP
Trigger: TGGTTCAGGAACACTCTCTCAGGAGGATCTCGAAGT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGACTGTGGGCAACATCTaGGAAAAGAAAGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPETVGNI*EKKEAS
Trigger: TGATGCCTCTTTCTTTTCTCAGATGTTGCCCACAGT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCTGTTTGGCTTGGGCTTaGTGTCCTCATCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLCLAWA*CPHRPP
Trigger: GGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACA...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTTGTTTGGCTTGGGCTTaGTGTCCTCATCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLCLAWA*CPHRPP
Trigger: GGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACA...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TTCAATAGCATGGATGGAATGGGGGCTGCATGCCTGGCAAGCACTCAGAGAAAAAATCAAAGCCTTTGGTaGCATTTTCAAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: FNSMDGMGAACLASTQRKNQSLW*HFQDSS
Trigger: AGAGCTATCTTGAAAATGGCACCAAAGGCTTTGATT...TTTTCTCTGAGTGCTTGCCAGGCATGCAGCCCCCATTCCATCCATGCTATTGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATGTGCCTCTTCCTGTTaGTTCTTAAGTTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTCASSC*FLSCSN
Trigger: GTTGGAGCAACTTAAGAAGCAACAGGAAGAGGCACA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTGTGCCTCTTCCTGTTaGTTCTTAAGTTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTICASSC*FLSCSN
Trigger: GTTGGAGCAACTTAAGAAGCAACAGGAAGAGGCACA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATACATCGCAGCAGCCTGTaGCTCTTCCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TQRNTNSLNLLPISKTEIHRSSL*LFLLLL
Trigger: AAGAAGCAACAGGAAGAGGCACAGGCTGCTGCGATG...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTTCCTCCACCGTGCTGTaGTCGTCATCCGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPASSTVL*SSSANS
Trigger: TGAGTTCGCGGATGACGAGCACAGCACGGTGGAGGA...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGAGGATGGTGCTCCATTaGCATAAACAGTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQRMVLH*HKQCIQ
Trigger: CTGAATACACTGTTTATGGCAATGGAGCACCATCCT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGGTGTCATAGGATGGTaGTCCATTGCCATAAACAGT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEGVIGW*SIAINS
Trigger: ACTGTTTATGGCAATGGAGCACCATCCTATGACACC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATATGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SKLIFTFFHLISVLFPSICLKWA*MKACTF
Trigger: AAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCA...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCTGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSCLKWA*MKACTF
Trigger: AAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCA...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTTCATCAGCCTCACGCTaGTTAAAGTGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFSSASR*LKWACM
Trigger: CATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGA...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTATTCCGGTGGATGTCTaGACCGGTGTGATTGGCGAT +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPIPVDV*TGVIGD
Trigger: ATCGCCAATCACACCGGTGCAGACATCCACCGGAAT...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTGTACTTCTCCACGCTaGTGCCAATGCCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSCTSPR*CQCRWL
Trigger: CAACCAGCGGCATTGGCAGCAGCGTGGAGAAGTACA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCATCTAGTTTATCTTTaGTGCCTTCAGGATCCGACT +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFHLVYL*CLQDPT
Trigger: AGTCGGATCCTGAAGGCAGCAAAGATAAACTAGATG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCATCTAGTTTATCTTTaGTGCCTTCAGGATCCGACT +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFHLVYL*CLQDPT
Trigger: AGTCGGATCCTGAAGGCAGCAAAGATAAACTAGATG...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTGGATCCACCAAGACTTaGCTAGCCCTTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVGSTKT*LALPRC
Trigger: ACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCC...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGCCAGCCTTTGAAGGTTaGTACTTGAAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLPAFEG*YLKKGQ
Trigger: CTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGG...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTGTTCTCCATCTGCTTaGTTTGAGTGTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTICSPSA*FECLSP
Trigger: TGGAGACAGACACTCAAAGCAAGCAGATGGAGAACA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTCGATACCAGCCTCGTaGTTCACATATGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFSIPAS*FTYAKL
Trigger: CAATTTTGCATATGTGAAGCACGAGGCTGGTATCGA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGGCATCTGCAAAGTCTaGCAGCTTACAGTACTCAAT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEGICKV*QLTVLN
Trigger: ATTGAGTACTGTAAGCTGGCAGACTTTGCAGATGCC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTGTCCAAGCAGTGGATaGGATCCCCGCTCACCATTG +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYCPSSG*DPRSPL
Trigger: CAATGGTGAGCGGGGATCGCATCCACTGCTTGGACA...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAACCGCTCTTCCATCTaGTGCCGCAGGATGTCCAAC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSNRSSI*CRRMSN
Trigger: GTTGGACATCCTGCGGCAGCAGATGGAAGAGCGGTT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACACGCTGCAGGACCACTaGAGATACCTCCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYTLQDH*RYLLLL
Trigger: AAGCAGGAGGAGGTATCTGCAGTGGTCCTGCAGCGT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTGCAAGCAGCCGCGCTaGCATCTTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNCKQPR*HLLILQ
Trigger: CTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGACATGCAGTAACCACCTaGCCAAGCATTAGAAAATCT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRHAVTT*PSIRKS
Trigger: AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATG...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCATGCAGTAACCACCTaGCCAAGCATTAGAAAATCT +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFHAVTT*PSIRKS
Trigger: AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATG...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCACGGCATGCCATCATaGAAATCATTTCTACGCATT +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFHGMPS*KSFLRI
Trigger: AATGCGTAGAAATGATTTGCATGATGGCATGCCGTG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCTTCTGATCACGGCATaGCATCATGCAAATCATTTC +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGLLITA*HHANHF
Trigger: GAAATGATTTGCATGATGGCATGCCGTGATCAGAAG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTCTCATGAAAACCAGTaGAGTAAAGAAACCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYSHENQ*SKETKW
Trigger: CCACTTGGTTTCTTTACTGCACTGGTTTTCATGAGA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCCTGACACATTCAACTaGAGCATCTTGGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNPDTFN*SILALK
Trigger: TTTCAAAGCCAAGATGCTGCAGTTGAATGTGTCAGG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAATAGAAAGCTCTGCTTaGCGACTTACTGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRIESSA*RLTVVC
Trigger: ACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTAT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTAAATTCTACGGATGCTaGTGCAGAAGCAGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSKFYGC*CRSRLK
Trigger: CTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTCAAAAATTCTACGGATaGTGCTGCAGAAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSQKFYG*CCRSRL
Trigger: AAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTATTCTTTCAGTTCGATaGCTGTTAACTGCGGGTGTA +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFILSVR*LLTAGV
Trigger: TACACCCGCAGTTAACAGGCATCGAACTGAAAGAAT...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATATTCTTTCAGTTCGATaGCTGTTAACTGCGGGTGTA +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNILSVR*LLTAGV
Trigger: TACACCCGCAGTTAACAGGCATCGAACTGAAAGAAT...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATATTTGGCAAAGCATTaGCACTTACCCACTCAGCGA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTYLAKH*HLPTQR
Trigger: TCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAATACTGTGGCTGCGCTaGTCTTTGATTGGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKILWLR*SLIGFV
Trigger: AACGAAGCCAATCAAAGAGCAGCGCAGCCACAGTAT...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATCTATATATATATGTaGAGTGATACTGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTIYIYM*SDTVAA
Trigger: CGCAGCCACAGTATCACTGCACATATATATATAGAT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTCCTCCTCTCGTCCTCTaGTTTAAATTACAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSPPLVL*FKLQSL
Trigger: GAGACTCTGTAATTTAAAGCAGAGGACGAGAGGAGG...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GATGCTGCTTTAGAATGGTGGACAAAACGAATGGAGGAGAAAGAGGAGATGTGGCTCCCAGGAAAAACATaGAGAATGCAAGGCCATTAT +
Preference number: 4 (lower is better)
Translates to: DAALEWWTKRMEEKEEMWLPGKT*RMQGHY
Trigger: ATAATGGCCTTGCATTCTGCATGTTTTTCCTGGGAG...CCACATCTCCTCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTGCCATCGGCCTTTGGTaGTTTCTTGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPAIGLW*FLELAL
Trigger: GAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGCCATCGGCCTTTGGTaGTTTCTTGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFAIGLW*FLELAL
Trigger: GAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCTTCCAGGTCGCTGTTTaGCTTGGGCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLFQVAV*LGLAVL
Trigger: GAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAA...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCCCAATCAAAGCCTTTaGTGCCATTTTCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQPNQSL*CHFQDS
Trigger: GCTATCTTGAAAATGGCACCAAAGGCTTTGATTGGG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGACATGTTCAAATTGTaGTGTCATAGGATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFDMFKL*CHRMVL
Trigger: GAGCACCATCCTATGACACCACAATTTGAACATGTC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGGACATGTTCAAATTGTaGTGTCATAGGATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVDMFKL*CHRMVL
Trigger: GAGCACCATCCTATGACACCACAATTTGAACATGTC...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTCGTGCACCTTTAGTTTaGTCCAGGCCACACCCTTCT +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVRAPLV*SRPHPS
Trigger: AGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACG...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCACTCGCCCACAGCAATaGGTACCCGTACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFTRPQQ*VPVQSS
Trigger: ACTTGACTGTACGGGTACCCATTGCTGTGGGCGAGT...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTACTCGCCCACAGCAATaGGTACCCGTACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFTRPQQ*VPVQSS
Trigger: ACTTGACTGTACGGGTACCCATTGCTGTGGGCGAGT...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTCAGCACTTGAACCGCTaGACACAACCTTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSQHLNR*TQPSVK
Trigger: CTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTG...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTCCTCGATGTTGACCTaGCAGCACTTGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYSSMLT*QHLNRW
Trigger: CCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGA...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTCCTCGATGTTGACCTaGCAGCACTTGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSSSMLT*QHLNRW
Trigger: CCAGCGGTTCAAGTGCTGCCAGGTCAACATCGAGGA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATCAGCATATTCCAGGATaGTGCGGATGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: VKVDLHVLPSDLCIVPLHQHIPG*CGWSFS
Trigger: AGAGAAAGACCATCCGCACCATCCTGGAATATGCTG...ATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATCAAAGACGATTCCTTaGATTTTGTTCAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTSKTIP*ILFKGR
Trigger: CCGCCCCTTGAACAAAATCCAAGGAATCGTCTTTGA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATAGGATGTCCAAGCAGTaGATGCGATCCCCGCTCACC +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNRMSKQ*MRSPLT
Trigger: GGTGAGCGGGGATCGCATCCACTGCTTGGACATCCT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGTGTCCTGTGGTGTATaGATCTCATGCATGACTTCT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEVSCGV*ISCMTS
Trigger: AGAAGTCATGCATGAGATCCATACACCACAGGACAC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGATAGTACAAGCCATTTaGGATCAAAGTCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVIVQAI*DQSLPH
Trigger: ATGGGGGAGACTTTGATCCCAAATGGCTTGTACTAT...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGTTTTGTCTGTCTGTCTaGTTTGGGGATGTACATTGG +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVFCLSV*FGDVHW
Trigger: CCAATGTACATCCCCAAACCAGACAGACAGACAAAA...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTGGAGCGGACTAGAGTaGGCACTTCGAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSWSGLE*ALRDPP
Trigger: AGGAGGATCTCGAAGTGCCCACTCTAGTCCGCTCCA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCTTTTTGCTAAACTGTaGGCAACATCTGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKLFAKL*ATSEKR
Trigger: TCTTTTCTCAGATGTTGCCCACAGTTTAGCAAAAAG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CAA 72 bp TGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTaGCCCTTCCCTAGCGCCTTTGCCTCTGTATCTCAA +
Preference number: 4 (lower is better)
Translates to: WYHFSFLKSNNT*PFPSAFASVSQ
Trigger: TTGAGATACAGAGGCAAAGGCGCTAGGGAAGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCTCAATGTTTGCCAGTaGCTCAGGGGTGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFLNVCQ*LRGERL
Trigger: AAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATATGTATAAATCCCTGTaGACGTGTACTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDMYKSL*TCTPHS
Trigger: AGAATGTGGAGTACACGTTCACAGGGATTTATACAT...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGATGTATAAATCCCTGTaGACGTGTACTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQMYKSL*TCTPHS
Trigger: AGAATGTGGAGTACACGTTCACAGGGATTTATACAT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTTTCGAAGGTTCCCCATaGACAGCTGCAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLFEGSP*TAAVRS
Trigger: TGATCGGACTGCAGCTGTTCATGGGGAACCTTCGAA...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTAAGAACCCACAAAGATaGCCAAGACGAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSKNPQR*PRRRRS
Trigger: TGATCTTCTTCGTCTTGGTCATCTTTGTGGGTTCTT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTTTCCTTTGCACTCTTTaGGCTGAGTTTAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFFLCTL*AEFRDF
Trigger: GAAATCTCTAAACTCAGCTCAAAGAGTGCAAAGGAA...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTTCCTTTGCACTCTTTaGGCTGAGTTTAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQFLCTL*AEFRDF
Trigger: GAAATCTCTAAACTCAGCTCAAAGAGTGCAAAGGAA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGCAGTGACTGATTCATaGTGGAAAATTTCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIAVTDS*WKISSL
Trigger: TAGGGAGGAAATTTTCCATCATGAATCAGTCACTGC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGCAGTGACTGATTCATaGTGGAAAATTTCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEAVTDS*WKISSL
Trigger: TAGGGAGGAAATTTTCCATCATGAATCAGTCACTGC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGATGCTGAGCAGTGACTaGTTCATGATGGAAAATTTC +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVMLSSD*FMMENF
Trigger: GAAATTTTCCATCATGAATCAGTCACTGCTCAGCAT...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCCACTCATTATACTGTTaGTTCTGTCCTTCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSHSLYC*FCPSAR
Trigger: ACGGGCGGAAGGACAGAATCAACAGTATAATGAGTG...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTGGTGGCACTCCCAGATaGGGAAAGTGTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVGGTPR*GKCWQI
Trigger: AATTTGCCAACACTTTCCTCATCTGGGAGTGCCACC...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp TTCTTCGGTCATGAAGATGTCCTGACCTCCGAACTTTTTCTTTTGTTGATTGAAAGGCCACACCCTTCTTaGTACGGATCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: FFGHEDVLTSELFLLLIERPHPS*YGSLRS
Trigger: AGATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCT...TTCAATCAACAAAAGAAAAAGTTCGGAGGTCAGGACATCTTCATGACCGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTTGTGGTCCTCATCAATaGTGTACTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFCGPHQ*CTSPRC
Trigger: GCAGCGTGGAGAAGTACATCATTGATGAGGACCACA...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCTGTGGTCCTCATCAATaGTGTACTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFCGPHQ*CTSPRC
Trigger: GCAGCGTGGAGAAGTACATCATTGATGAGGACCACA...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGGACACAACCTTCTGTaGAGCAGGCATCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYGHNLL*SRHLDP
Trigger: TGGATCCAGATGCCTGCTTCACAGAAGGTTGTGTCC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGACAACATTGTCAAAGTTaGTCTTCACGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRQHCQS*SSRSSI
Trigger: GATGGAAGAACGTGAAGATCAACTTTGACAATGTTG...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCAACATTGTCAAAGTTaGTCTTCACGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQQHCQS*SSRSSI
Trigger: GATGGAAGAACGTGAAGATCAACTTTGACAATGTTG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCAACATTGTCAAAGTTaGTCTTCACGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGQHCQS*SSRSSI
Trigger: GATGGAAGAACGTGAAGATCAACTTTGACAATGTTG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCTTGAAGGTTGCTACTTaGAGAAGGGCCAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSLKVAT*RRARYP
Trigger: AGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAA...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCTGTTCCAGCCAATGGTaGAGTAGTAGTGCCTCAACG +
Preference number: 4 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPCSSQW*SSSAST
Trigger: CGTTGAGGCACTACTACTTCACCATTGGCTGGAACA...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCGAAGAAGATGCCCACTaGGGGGTTCCCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSEEDAH*GVPTIS
Trigger: GGAGATTGTGGGAACCCCTCAGTGGGCATCTTCTTC...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCGCTTACAGTACTCAATaGACTGGGTGGCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPAYSTQ*TGWHRG
Trigger: ACCCCGATGCCACCCAGTTCATTGAGTACTGTAAGC...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACTAAGTTGCATTGACTaGTGTGGAACATGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTLSCID*CGTCSN
Trigger: GTTACTGCATGTTCCACATCAGTCAATGCAACTTAG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATTACCCAGAAGGTGTATaGAGGACTTTTAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNYPEGV*RTFKNS
Trigger: TGAGTTCTTAAAAGTCCTTCATACACCTTCTGGGTA...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCTACCCAGAAGGTGTATaGAGGACTTTTAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGYPEGV*RTFKNS
Trigger: TGAGTTCTTAAAAGTCCTTCATACACCTTCTGGGTA...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGTCAATTCTCCAGTATaGAGGCTAAACGATCGTCAT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTVNSPV*RLNDRH
Trigger: ATGACGATCGTTTAGCCTTCATACTGGAGAATTGAC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTGCAAGGGAATGCACTaGGGGAAGCTGGAACATCCT +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPCKGMH*GKLEHP
Trigger: AGGATGTTCCAGCTTCCCTCAGTGCATTCCCTTGCA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACATGGAATGGAAGATATaGCGCTCCCCCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYMEWKI*RSPRSH
Trigger: GTGGCTTCTGGGGGAGCGTCATATCTTCCATTCCAT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGGTGTAAACTGCTGGTaGTGGTGTCATTTACTACCA +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKGVNCW*WCHLLP
Trigger: TGGTAGTAAATGACACCATCACCAGCAGTTTACACC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGTAAAGGTTCCAGCATaGCAGGAACTGTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIVKVPA*QELCRN
Trigger: ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTAC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGTAAAGGTTCCAGCATaGCAGGAACTGTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTVKVPA*QELCRN
Trigger: ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTAC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGAGGATGGTGCTCCATTaGCATAAACAGTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPERMVLH*HKQCIQ
Trigger: CTGAATACACTGTTTATGGCAATGGAGCACCATCCT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCGCCTGCATGAAGGCGTaGACCTTTAGTTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPACMKA*TFSLVQ
Trigger: CTGGACCAAACTAAAGGTGCACGCCTTCATGCAGGC...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACATTCCGGTGGATGTCTaGACCGGTGTGATTGGCGAT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYIPVDV*TGVIGD
Trigger: ATCGCCAATCACACCGGTGCAGACATCCACCGGAAT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCGCTGGTTGTGCCATTaGCATTCTTCTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFRWLCH*HSSGSH
Trigger: GTGACTTCCAGAAGAATGGCAATGGCACAACCAGCG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCAATGCCGCTGGTTGTaGCATTGCCATTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFQCRWL*HCHSSG
Trigger: TCCAGAAGAATGGCAATGGCACAACCAGCGGCATTG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCAATGCCGCTGGTTGTaGCATTGCCATTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPQCRWL*HCHSSG
Trigger: TCCAGAAGAATGGCAATGGCACAACCAGCGGCATTG...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCCTAGTTTATCTTTGCTaGCTTCAGGATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSLVYLC*LQDPTR
Trigger: GCGAGTCGGATCCTGAAGGCAGCAAAGATAAACTAG...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGGATCCACCAAGACTTaGCTAGCCCTTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSGSTKT*LALPRC
Trigger: ACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGGATCCACCAAGACTTaGCTAGCCCTTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYGSTKT*LALPRC
Trigger: ACATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATACATATTCCAGGATGGTaGGGATGGTCTTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SKLIFTFFHLISVLFPSIHIPGW*GWSFSA
Trigger: AGCAGAGAAAGACCATCCGCACCATCCTGGAATATG...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTTCCTCATACTTAGGCTaGTCATCAGGCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFSSYLG*SSGFRE
Trigger: TTCCCGGAAGCCTGATGAGCAGCCTAAGTATGAGGA...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTCGATACCAGCCTCGTaGTTCACATATGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPESIPAS*FTYAKL
Trigger: CAATTTTGCATATGTGAAGCACGAGGCTGGTATCGA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATCGATACCAGCCTCGTaGTTCACATATGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTSIPAS*FTYAKL
Trigger: CAATTTTGCATATGTGAAGCACGAGGCTGGTATCGA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGATGCTCCAAGGCATCTaGAAAGTCTGCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLMLQGI*KVCQLT
Trigger: TGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCAT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGGCACTCGGAGAGGATaGTCCAAGGCATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNGTRRG*SKASAK
Trigger: CTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCGGCACTCGGAGAGGATaGTCCAAGGCATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSGTRRG*SKASAK
Trigger: CTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCC...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACATGCAGTAACCACCTaGCCAAGCATTAGAAAATCT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTHAVTT*PSIRKS
Trigger: AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACCCATGTGGAGAAGATaGGCTTTATGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTPMWRR*ALCQRN
Trigger: GTTTCTTTGACATAAAGCGCATCTTCTCCACATGGG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCCCATGTGGAGAAGATaGGCTTTATGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIPMWRR*ALCQRN
Trigger: GTTTCTTTGACATAAAGCGCATCTTCTCCACATGGG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGCACGGCATGCCATCATaGAAATCATTTCTACGCATT +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMHGMPS*KSFLRI
Trigger: AATGCGTAGAAATGATTTGCATGATGGCATGCCGTG...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCACGGCATGCCATCATaGAAATCATTTCTACGCATT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIHGMPS*KSFLRI
Trigger: AATGCGTAGAAATGATTTGCATGATGGCATGCCGTG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCACGGCATGCCATCATaGAAATCATTTCTACGCATT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEHGMPS*KSFLRI
Trigger: AATGCGTAGAAATGATTTGCATGATGGCATGCCGTG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCTTCTGATCACGGCATaGCATCATGCAAATCATTTC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTILLITA*HHANHF
Trigger: GAAATGATTTGCATGATGGCATGCCGTGATCAGAAG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCTTCTGATCACGGCATaGCATCATGCAAATCATTTC +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPELLITA*HHANHF
Trigger: GAAATGATTTGCATGATGGCATGCCGTGATCAGAAG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACAAATACAGTGAACGGTaGAGGGCTGGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYKYSER*RAGSCP
Trigger: TGGACAGGACCCAGCCCTGCACCGTTCACTGTATTT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATCATCTTGCAAAATGTaGAACAATGGCTGTATGTTA +
Preference number: 4 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQSSCKM*NNGCML
Trigger: TAACATACAGCCATTGTTGCACATTTTGCAAGATGA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGGGCAAGGGAAGCCCTaGTCAGTGGAGAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSGQGKP*SVEKCD
Trigger: ATCACATTTCTCCACTGAGCAGGGCTTCCCTTGCCC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGTCTCATGAAAACCAGTaGAGTAAAGAAACCAAGTGG +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVSHENQ*SKETKW
Trigger: CCACTTGGTTTCTTTACTGCACTGGTTTTCATGAGA...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTAAATTACCTTCAAAGTaGTTCTACTGCAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFKLPSK*FYCKAD
Trigger: ATCTGCCTTGCAGTAGAAGCACTTTGAAGGTAATTT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACTGTGGTTTGTTCTATaGAAAACTAGTCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTLWFVL*KTSLVD
Trigger: GTCCACCAGACTAGTTTTGCATAGAACAAACCACAG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTATAGAAAGCTCTGCTTaGCGACTTACTGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIIESSA*RLTVVC
Trigger: ACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTAT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTTCGATGCCTGTTAACTaGGGGTGTAAACTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPSMPVN*GCKLLV
Trigger: CACCAGCAGTTTACACCCGCAGTTAACAGGCATCGA...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGTGGAGTATAAATACTaGACCAAGGACCTGGCTACA +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKVEYKY*TKDLAT
Trigger: TGTAGCCAGGTCCTTGGTGCAGTATTTATACTCCAC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTTTTCTCAAGCATTTCTaGCATTTCCGCATAAACAGA +
Preference number: 4 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPFLKHF*HFRINR
Trigger: TCTGTTTATGCGGAAATGGCAGAAATGCTTGAGAAA...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTTTTCCTCCATACATaGATCATGCTAATTAAAGGA +
Preference number: 4 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVVFLHT*IMLIKG
Trigger: TCCTTTAATTAGCATGATGCATGTATGGAGGAAAAC...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPTAIGL*WFLELA
Trigger: AGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGT...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACACACTGGTATCCCTCTaGGCATTGCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYTLVSL*ALPSIR
Trigger: TCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCACACTGGTATCCCTCTaGGCATTGCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLTLVSL*ALPSIR
Trigger: TCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGT...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCCCTATTCTGTTGTCTaGCAGCCGAAAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYPYSVV*QPKGLP
Trigger: AGGAAGGCCTTTCGGCTGCCAGACAACAGAATAGGG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGACATGTTCAAATTGTaGTGTCATAGGATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTDMFKL*CHRMVL
Trigger: GAGCACCATCCTATGACACCACAATTTGAACATGTC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCTGCACCGGTGTGATTaGCGATACAGTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSLHRCD*RYSWPS
Trigger: AGAAGGCCAACTGTATCGCCAATCACACCGGTGCAG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTCCATTGCCATTCTTCTaGAAGTCACCATTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVPLPFF*KSPFRW
Trigger: CCACCGGAATGGTGACTTCCAGAAGAATGGCAATGG...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGGACCTCTTCTACTTCTaGTTTGATATCAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVDLFYF*FDINGA
Trigger: AGCACCATTGATATCAAACCAGAAGTAGAAGAGGTC...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCAGCACTTGAACCGCTaGACACAACCTTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFQHLNR*TQPSVK
Trigger: CTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCATTAGTAGTGTCCTGTaGTGTATGGATCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFISSVL*CMDLMH
Trigger: ATGCATGAGATCCATACACCACAGGACACTACTAAT...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGGAAGCCCTGCTCAGTaGAGAAATGTGATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSGSPAQ*RNVMEA
Trigger: TGCCTCCATCACATTTCTCCACTGAGCAGGGCTTCC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTTTGGGGATGTACATTaGCTGACAGCATCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSFGDVH*LTASKF
Trigger: GAACTTAGATGCTGTCAGCCAATGTACATCCCCAAA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTTTTGTCTGTCTGTCTaGTTTGGGGATGTACATTGG +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEFCLSV*FGDVHW
Trigger: CCAATGTACATCCCCAAACCAGACAGACAGACAAAA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGGGCTTCGTTAATATTTaGCAAAGCATTGCCACTTAC +
Preference number: 4 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVGFVNI*QSIATY
Trigger: GTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCC...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTCAGCTGCTGCTCAGTaGCTTTGGCTCTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLSAAAQ*LWLCIL
Trigger: TAAAATGCAGAGCCAAAGCCACTGAGCAGCAGCTGA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTTTAGGGGCTTTGACTaGGAGTTTGTTTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQFRGFD*EFVYLS
Trigger: AGAGAGATAAACAAACTCCCAGTCAAAGCCCCTAAA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACCAGGACTCAAGAATTaGGATAGTCAAGCAACAAAC +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTPGLKN*DSQATN
Trigger: GTTTGTTGCTTGACTATCCCAATTCTTGAGTCCTGG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGTTCTGTCCCTTTTCTaGAACCACTGGACCACACTC +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFVLSLF*NHWTTL
Trigger: GAGTGTGGTCCAGTGGTTCCAGAAAAGGGACAGAAC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAATTGTCTTCAGGCCTaGAATTACAGAGATAGTTTT +
Preference number: 4 (lower is better)
Translates to: PISKPREAHVEKMRFMSKNCLQA*NYRDSF
Trigger: AAAACTATCTCTGTAATTCCAGGCCTGAAGACAATT...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TGCAAGGCCATTATCAACTGTACTGATGCTGCTTTAGAATGGTGGACAAAACGAGCTGCTTTAGAATGGTaGACAAAACGAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CKAIINCTDAALEWWTKRAALEW*TKRMEE
Trigger: CTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGC...TCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CAA 72 bp CAAGATAGAAAGCTCTGCTTGCCGACTTACTGTGGTTaGTTCTATGCAAAACTAGTCTGGTGGACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: QDRKLCLPTYCG*FYAKLVWWTVK
Trigger: TTTCACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
3UTR CAA 72 bp TATATATGTGCAGTGATACTGTGGCTGCGCTGCTCTTaGATTGGCTTCGTTAATATTTGGCAAAGCATTGCC +
Preference number: 4 (lower is better)
Translates to: YICAVILWLRCS*IGFVNIWQSIA
Trigger: GGCAATGCTTTGCCAAATATTAACGAAGCCAATCAAAGAGCAGCGCAGCCACAGTATCACTGCACATATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCTCAATGTTTGCCAGTaGCTCAGGGGTGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYLNVCQ*LRGERL
Trigger: AAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCCCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLPLVVS*ACSQQC
Trigger: GCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGG...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYPLVVS*ACSQQC
Trigger: GCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTATGCTGAGCAGTGACTaGTTCATGATGGAAAATTTC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIMLSSD*FMMENF
Trigger: GAAATTTTCCATCATGAATCAGTCACTGCTCAGCAT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTATGCTGAGCAGTGACTaGTTCATGATGGAAAATTTC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSMLSSD*FMMENF
Trigger: GAAATTTTCCATCATGAATCAGTCACTGCTCAGCAT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGATGCTGAGCAGTGACTaGTTCATGATGGAAAATTTC +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEMLSSD*FMMENF
Trigger: GAAATTTTCCATCATGAATCAGTCACTGCTCAGCAT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGGCGGGCACTTTCTCTaGGACTCTTCCAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNGGHFL*DSSSSS
Trigger: AGAAGAACTGGAAGAGTCTCAGAGAAAGTGCCCGCC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGGTGGCACTCCCAGATaGGGAAAGTGTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYGGTPR*GKCWQI
Trigger: AATTTGCCAACACTTTCCTCATCTGGGAGTGCCACC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCGCCCAGGGCACCCACTaGATTTCCAATAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFAQGTH*ISNNLD
Trigger: ATCAAGATTATTGGAAATTCAGTGGGTGCCCTGGGC...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTGCCCAGGGCACCCACTaGATTTCCAATAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVAQGTH*ISNNLD
Trigger: ATCAAGATTATTGGAAATTCAGTGGGTGCCCTGGGC...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTCTTGATACGGATCACTaGGATCTGGAGGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSLDTDH*DLEVVH
Trigger: ATGAACAACCTCCAGATCTCAGTGATCCGTATCAAG...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCCTTGATACGGATCACTaGGATCTGGAGGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSLDTDH*DLEVVH
Trigger: ATGAACAACCTCCAGATCTCAGTGATCCGTATCAAG...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTGTGGTCCTCATCAATaGTGTACTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPCGPHQ*CTSPRC
Trigger: GCAGCGTGGAGAAGTACATCATTGATGAGGACCACA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCGGACACAACCTTCTGTaGAGCAGGCATCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSGHNLL*SRHLDP
Trigger: TGGATCCAGATGCCTGCTTCACAGAAGGTTGTGTCC...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATATCACGTTCTTCCATCTaGTCTCTGTATTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SKLIFTFFHLISVLFPSISRSSI*SLYCSP
Trigger: AGGGGAACAATACAGAGATCAGATGGAAGAACGTGA...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTCAACATTGTCAAAGTTaGTCTTCACGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSQHCQS*SSRSSI
Trigger: GATGGAAGAACGTGAAGATCAACTTTGACAATGTTG...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCAACATTGTCAAAGTTaGTCTTCACGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIQHCQS*SSRSSI
Trigger: GATGGAAGAACGTGAAGATCAACTTTGACAATGTTG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCTTGAAGGTTGCTACTTaGAGAAGGGCCAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFLKVAT*RRARYP
Trigger: AGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAA...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTGTCCATCCAGCCTTTaGAGGTTGCTACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSCPSSL*RLLLEE
Trigger: TTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGACA...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTCCATCTGCTTGCTTTaGGTGTCTGTCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYSICLL*VSVSTI
Trigger: GATGGTGGAGACAGACACTCAAAGCAAGCAGATGGA...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGCTTACAGTACTCAATaGACTGGGTGGCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNAYSTQ*TGWHRG
Trigger: ACCCCGATGCCACCCAGTTCATTGAGTACTGTAAGC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGACGCAGTGTGGTTGTaGTTGGCTCGTAAGACACTT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSDAVWL*LARKTL
Trigger: AAGTGTCTTACGAGCCAATCACAACCACACTGCGTC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATAACGAACTTTTAAAGTaGTGCTTTCTGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNNELLK*CFLLLR
Trigger: TCTCAGAAGCAGAAAGCATCACTTTAAAAGTTCGTT...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGAACGAACTTTTAAAGTaGTGCTTTCTGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQNELLK*CFLLLR
Trigger: TCTCAGAAGCAGAAAGCATCACTTTAAAAGTTCGTT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCATCTCCAAACCACGTaGAGCCCATGTGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSHLQTT*SPCGED
Trigger: ATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCAGCCTGAAGAAACCTaGTTGTTTTCCCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSQPEET*LFSPTH
Trigger: ATGGGTGGGGGAAAACAATCAGGTTTCTTCAGGCTG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCAGCCTGAAGAAACCTaGTTGTTTTCCCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYQPEET*LFSPTH
Trigger: ATGGGTGGGGGAAAACAATCAGGTTTCTTCAGGCTG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTATCATTTCTACGCATTaGACGAGCACAATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSIISTH*TSTMFG
Trigger: TCCAAACATTGTGCTCGTTCAATGCGTAGAAATGAT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAATCATTTCTACGCATTaGACGAGCACAATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTIISTH*TSTMFG
Trigger: TCCAAACATTGTGCTCGTTCAATGCGTAGAAATGAT...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCTCATGCATGACTTCTaGTCACGGCATGCCATCATG +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYLMHDF*SRHAIM
Trigger: CATGATGGCATGCCGTGATCAGAAGTCATGCATGAG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATACCCAGAAGGTGTATaGAGGACTTTTAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTYPEGV*RTFKNS
Trigger: TGAGTTCTTAAAAGTCCTTCATACACCTTCTGGGTA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000668547.1
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTCTCCAGTCAACTTCTaGCGCCAAAAGTGGCTCGTT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSSPVNF*RQKWLV
Trigger: AACGAGCCACTTTTGGCGTCAGAAGTTGACTGGAGA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATTTGGCTTAGAGGAGTaGTGGACTTTTTATCACGTC +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKFGLEE*WTFYHV
Trigger: GACGTGATAAAAAGTCCATCACTCCTCTAAGCCAAA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCTGAGAGAGTGTTCCTaGACCAGGAGACATGGCCTA +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNLRECS*TRRHGL
Trigger: TAGGCCATGTCTCCTGGTTCAGGAACACTCTCTCAG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACAACAAGTCGAGGAGGTaGGGGAAGGAGATACAGCAA +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYNKSRR*GKEIQQ
Trigger: TTGCTGTATCTCCTTCCCTCACCTCCTCGACTTGTT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGTGCCATTTTCAAGATAGCTCTCGTTGAAGTTTATGGGCCACACAACACACTTCATTATCAACTGTACTaGTGCTGCTTTAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: GAIFKIALVEVYGPHNTLHYQLY*CCFRMV
Trigger: CACCATTCTAAAGCAGCATCAGTACAGTTGATAATG...AAGTGTGTTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTGAAAATGGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp TGCAAGGCCATTATCAACTGTACTGATGCTGCTTTAGAATGGTGGACAAAACGAATGGTGAGATCCAAGTaGTTCTTAAGCACGTGCTTT +
Preference number: 4 (lower is better)
Translates to: CKAIINCTDAALEWWTKRMVRSK*FLSTCF
Trigger: AAAGCACGTGCTTAAGAATCACTTGGATCTCACCAT...TCGTTTTGTCCACCATTCTAAAGCAGCATCAGTACAGTTGATAATGGCCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTACTCCTGGTTTCATGTaGTCCTCTTTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLTPGFM*SSFLGL
Trigger: GAGGCCAAGGAAAGAGGATCACATGAAACCAGGAGT...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR GCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTGCTTGCTCTCAGCAATaGGCCTCTCAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLACSQQ*ASQCLP
Trigger: TGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGC...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCTATCCCTCTGGGCATTaGCCAGCATCAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLYPSGH*PASELF
Trigger: GAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATA...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCATCGCAGCAGCCTGTaGCTCTTCCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNHRSSL*LFLLLL
Trigger: AAGAAGCAACAGGAAGAGGCACAGGCTGCTGCGATG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCGGTGTCATAGGATGGTaGTCCATTGCCATAAACAGT +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSGVIGW*SIAINS
Trigger: ACTGTTTATGGCAATGGAGCACCATCCTATGACACC...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTGCTTAAAGTGGGCCTaGATGAAGGCGTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYCLKWA*MKACTF
Trigger: AAAGGTGCACGCCTTCATGCAGGCCCACTTTAAGCA...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTCATCAGCCTCACGCTaGTTAAAGTGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNSSASR*LKWACM
Trigger: CATGCAGGCCCACTTTAAGCAGCGTGAGGCTGATGA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCGCTGGTTGTGCCATTaGCATTCTTCTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSRWLCH*HSSGSH
Trigger: GTGACTTCCAGAAGAATGGCAATGGCACAACCAGCG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCAATGCCGCTGGTTGTaGCATTGCCATTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYQCRWL*HCHSSG
Trigger: TCCAGAAGAATGGCAATGGCACAACCAGCGGCATTG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTCTAGTTTATCTTTGCTaGCTTCAGGATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFLVYLC*LQDPTR
Trigger: GCGAGTCGGATCCTGAAGGCAGCAAAGATAAACTAG...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp GTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATCATCTAGTTTATCTTTaGTGCCTTCAGGATCCGACT +
Preference number: 4 (lower is better)
Translates to: VKVDLHVLPSDLCIVPLHHLVYL*CLQDPT
Trigger: AGTCGGATCCTGAAGGCAGCAAAGATAAACTAGATG...ATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCATATTCCAGGATGGTaGGGATGGTCTTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFHIPGW*GWSFSA
Trigger: AGCAGAGAAAGACCATCCGCACCATCCTGGAATATG...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTGTTCTCCATCTGCTTaGTTTGAGTGTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLCSPSA*FECLSP
Trigger: TGGAGACAGACACTCAAAGCAAGCAGATGGAGAACA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTTTCTCAATTATATCTaGCAGGAACATTCCCACAAT +
Preference number: 4 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYFLNYI*QEHSHN
Trigger: ATTGTGGGAATGTTCCTGGCAGATATAATTGAGAAA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTACAAAGAAGAAGATaGCCACTGAGGGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVLQRRR*PLRGSH
Trigger: GTGGGAACCCCTCAGTGGGCATCTTCTTCTTTGTAA...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTATGCTCCAAGGCATCTaGAAAGTCTGCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFMLQGI*KVCQLT
Trigger: TGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCAT...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGAAATTCTACGGATGCTaGTGCAGAAGCAGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLKFYGC*CRSRLK
Trigger: CTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTGGGTGGTTGGAGCAGTaGAGTTTAAAATGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPGWLEQ*SLKWLS
Trigger: TGAGAGCCATTTTAAACTGCACTGCTCCAACCACCC...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTAAACTCTGTCACATATaGCATCATGATGACACTGAA +
Preference number: 4 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFKLCHI*HHDDTE
Trigger: TTCAGTGTCATCATGATGGCATATGTGACAGAGTTT...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627620.5
CDS-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTAGGTGCGAGCCACTGTaGCCGGCTGTATTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPARCEPL*PAVFCF
Trigger: AAAGCAAAATACAGCCGGGCACAGTGGCTCGCACCT...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTAGGGTCTCACTGTGTTaGCAAGCTGGTCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPARVSLC*QAGLQL
Trigger: GAGTTGGAGACCAGCTTGGCAACACAGTGAGACCCT...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCTGCGTCAAATAGTATaGGTCAAAGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPLRQIV*VKVLQG
Trigger: CCCCTGGAGGACTTTGACCCATACTATTTGACGCAG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCTGCGTCAAATAGTATaGGTCAAAGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYLRQIV*VKVLQG
Trigger: CCCCTGGAGGACTTTGACCCATACTATTTGACGCAG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCGTGCACCTTTAGTTTaGTCCAGGCCACACCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNRAPLV*SRPHPS
Trigger: AGAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGATTGGCGATACAGTTaGCCTTCTTTTCATACAACT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPEDWRYS*PSFHTT
Trigger: AGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCCATTGCCATTCTTCTaGAAGTCACCATTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSPLPFF*KSPFRW
Trigger: CCACCGGAATGGTGACTTCCAGAAGAATGGCAATGG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTGCTGCCAATGCCGCTaGTTGTGCCATTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNCCQCR*LCHCHS
Trigger: AGAATGGCAATGGCACAACCAGCGGCATTGGCAGCA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGACCTCTTCTACTTCTaGTTTGATATCAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTDLFYF*FDINGA
Trigger: AGCACCATTGATATCAAACCAGAAGTAGAAGAGGTC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCAGCACTTGAACCGCTaGACACAACCTTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSQHLNR*TQPSVK
Trigger: CTTCACAGAAGGTTGTGTCCAGCGGTTCAAGTGCTG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCAGCATATTCCAGGATaGTGCGGATGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPQHIPG*CGWSFS
Trigger: AGAGAAAGACCATCCGCACCATCCTGGAATATGCTG...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCAATGGTATTGGGCTTaGGCACTCGGAGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSQWYWA*ALGEDA
Trigger: AGCATCCTCTCCGAGTGCCCAAGCCCAATACCATTG...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATATCCCCGCTCACCATTaGCAGATCCATAGCGATGAG +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNIPAHH*QIHSDE
Trigger: CTCATCGCTATGGATCTGCCAATGGTGAGCGGGGAT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPNEHNV*NRPEQV
Trigger: GACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTT...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCAAAATGTGCAACAATaGCTGTATGTTAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQQNVQQ*LYVRDV
Trigger: GACATCTCTAACATACAGCCATTGTTGCACATTTTG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGCAAAACTAGTCTGGTaGACTGTGAAATTACCTTCA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTAKLVW*TVKLPS
Trigger: TGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCTTGCCGACTTACTGTaGTTTGTTCTATGCAAAACT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPELADLL*FVLCKT
Trigger: AGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACAGCACATGGTGTACTTaGCGGGATCTTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYSTWCT*RDLTAL
Trigger: CAGAGCTGTAAGATCCCGCCAAGTACACCATGTGCT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGGCTTCGTTAATATTTaGCAAAGCATTGCCACTTAC +
Preference number: 4 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSGFVNI*QSIATY
Trigger: GTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTTAAAAGGTGGATTGTaGAGTATAAATACTGCACCA +
Preference number: 4 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFLKGGL*SINTAP
Trigger: TGGTGCAGTATTTATACTCCACAATCCACCTTTTAA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTTCAGCTGCTGCTCAGTaGCTTTGGCTCTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFSAAAQ*LWLCIL
Trigger: TAAAATGCAGAGCCAAAGCCACTGAGCAGCAGCTGA...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCAAAGTCATGACCCATaGCGATCTCACCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNQSHDP*RSHLHS
Trigger: GCTGTGGAGGTGAGATCGCCATGGGTCATGACTTTG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCTTTTTGCTAAACTGTaGGCAACATCTGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFLFAKL*ATSEKR
Trigger: TCTTTTCTCAGATGTTGCCCACAGTTTAGCAAAAAG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATATTACTGTAATTCCATaGAGCCAGGAAGCAAATGAT +
Preference number: 4 (lower is better)
Translates to: QNCSHRVKVPACQELCRNITVIP*SQEAND
Trigger: ATCATTTGCTTCCTGGCTCCATGGAATTACAGTAAT...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CAA 72 bp CAGTTTCTAGTGGTCCAACAAGATAGAAAGCTCTGCTaGCCGACTTACTGTGGTTTGTTCTATGCAAAACTA +
Preference number: 4 (lower is better)
Translates to: QFLVVQQDRKLC*PTYCGLFYAKL
Trigger: TAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATCTTGTTGGACCACTAGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGACAAGATAGCTCTCGTTaGAGTTTATGGGCCACACAA +
Preference number: 4 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRQDSSR*SLWATQ
Trigger: TTGTGTGGCCCATAAACTTCAACGAGAGCTATCTTG...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTCACGTTCTTCCATCTaGTCTCTGTATTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVSRSSI*SLYCSP
Trigger: AGGGGAACAATACAGAGATCAGATGGAAGAACGTGA...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTTGAAGGTTGCTACTTaGAGAAGGGCCAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSLKVAT*RRARYP
Trigger: AGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTTGTCCATCCAGCCTTTaGAGGTTGCTACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFCPSSL*RLLLEE
Trigger: TTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGACA...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAAACGAACTTTTAAAGTaGTGCTTTCTGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTNELLK*CFLLLR
Trigger: TCTCAGAAGCAGAAAGCATCACTTTAAAAGTTCGTT...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGAATCCAGTCATTAGGTaGGAAACCCCTGGACTAAAA +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLNPVIR*ETPGLK
Trigger: TTTTAGTCCAGGGGTTTCTCACCTAATGACTGGATT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGGGATGTACATTGGCTaGCAGCATCTAAGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFGMYIG*QHLSSK
Trigger: CTTAGAACTTAGATGCTGTCAGCCAATGTACATCCC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCATGACATCACTAGCATaGGCACATGGTGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPMTSLA*AHGVLG
Trigger: GCCAAGTACACCATGTGCTCATGCTAGTGATGTCAT...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTGGAAGGACAGTGGGTaGAGGATAAAAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPWKDSG*RIKRWE
Trigger: TTCCCACCTTTTTATCCTTCACCCACTGTCCTTCCA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGGCTGCGCTGCTCTTTaGTTGGCTTCGTTAATATTT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFGCAAL*LASLIF
Trigger: AAATATTAACGAAGCCAATCAAAGAGCAGCGCAGCC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTTGCGAGAGCCCCTTTaGTTTCTCTTCCCTCTATTC +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPLREPL*FLFPLF
Trigger: GAATAGAGGGAAGAGAAATCAAAGGGGCTCTCGCAA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCAAGTCACAAAGTCATaGCCCATGGCGATCTCACCT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNQVTKS*PMAISP
Trigger: AGGTGAGATCGCCATGGGTCATGACTTTGTGACTTG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGCTTGCTCTCAGCAATaGGCCTCTCAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNACSQQ*ASQCLP
Trigger: TGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAATCAAAGCCTTTGGTaGCATTTTCAAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTINQSLW*HFQDSS
Trigger: AGAGCTATCTTGAAAATGGCACCAAAGGCTTTGATT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGAATCAAAGCCTTTGGTaGCATTTTCAAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPENQSLW*HFQDSS
Trigger: AGAGCTATCTTGAAAATGGCACCAAAGGCTTTGATT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAAATCAAAGCCTTTGGTaGCATTTTCAAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTNQSLW*HFQDSS
Trigger: AGAGCTATCTTGAAAATGGCACCAAAGGCTTTGATT...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGTTGGGGTTCCTTCCTaGTTTCATACACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYVGVPS*FHTLVS
Trigger: GGATACCAGTGTATGAAAGCAGGAAGGAACCCCAAC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAGGCCTTCCTTCTCATaGCATCTTCTGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSRPSFS*HLLTLT
Trigger: AGTCAGAGTCAGAAGATGGCATGAGAAGGAAGGCCT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCAGGATGGTGCTCCATTaGCATAAACAGTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSRMVLH*HKQCIQ
Trigger: CTGAATACACTGTTTATGGCAATGGAGCACCATCCT...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGGTGTCATAGGATGGTaGTCCATTGCCATAAACAGT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFGVIGW*SIAINS
Trigger: ACTGTTTATGGCAATGGAGCACCATCCTATGACACC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTCCTCATACTTAGGCTaGTCATCAGGCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNSSYLG*SSGFRE
Trigger: TTCCCGGAAGCCTGATGAGCAGCCTAAGTATGAGGA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTGTTCTCCATCTGCTTaGTTTGAGTGTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVCSPSA*FECLSP
Trigger: TGGAGACAGACACTCAAAGCAAGCAGATGGAGAACA...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATTTTCTCAATTATATCTaGCAGGAACATTCCCACAAT +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNFLNYI*QEHSHN
Trigger: ATTGTGGGAATGTTCCTGGCAGATATAATTGAGAAA...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTGGCATCTGCAAAGTCTaGCAGCTTACAGTACTCAAT +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVGICKV*QLTVLN
Trigger: ATTGAGTACTGTAAGCTGGCAGACTTTGCAGATGCC...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTTTTCTCCCGGTGTGTaGCTCCATTCTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYFSPGV*LHSPAY
Trigger: ATAAGCTGGAGAATGGAGGCACACACCGGGAGAAAA...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGTCTCCACAGCTGTTCTaGATTGATAATATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMSPQLF*IDNIQE
Trigger: TTCCTGAATATTATCAATGCAGAACAGCTGTGGAGA...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTCTCCACAGCTGTTCTaGATTGATAATATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HANHFYALNEHNVWNRPESPQLF*IDNIQE
Trigger: TTCCTGAATATTATCAATGCAGAACAGCTGTGGAGA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGGTGTATGGATCTCATaGATGACTTCTGATCACGGC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSGVWIS*MTSDHG
Trigger: GCCGTGATCAGAAGTCATGCATGAGATCCATACACC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGAAATTACCTTCAAAGTaGTTCTACTGCAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LASLIFGKALPLTHSAKMKLPSK*FYCKAD
Trigger: ATCTGCCTTGCAGTAGAAGCACTTTGAAGGTAATTT...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCAAAAATTCTACGGATaGTGCTGCAGAAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFQKFYG*CCRSRL
Trigger: AAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCAGTTTAGCCAAATCTTaGATAGACGTGGTTAGAATT +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGSLAKS*IDVVRI
Trigger: AATTCTAACCACGTCTATGCAAGATTTGGCTAAACT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCAAAATCTCATCACTATaGCCTAGTAGCTTAATGACA +
Preference number: 4 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGKISSL*PSSLMT
Trigger: TGTCATTAAGCTACTAGGGCATAGTGATGAGATTTT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCCCACTCAGCGAAGATaGACAAAAACGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYPTQRR*TKTSSL
Trigger: CAGTGATGACGTTTTTGTGCATCTTCGCTGAGTGGG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTTTCTCAAGCATTTCTaGCATTTCCGCATAAACAGA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIFLKHF*HFRINR
Trigger: TCTGTTTATGCGGAAATGGCAGAAATGCTTGAGAAA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAAAACTCTGTCACATATaGCATCATGATGACACTGAA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTKLCHI*HHDDTE
Trigger: TTCAGTGTCATCATGATGGCATATGTGACAGAGTTT...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATAAGGCACATGCCACCATaGCTGGCTAATGTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TQRNTNSLNLLPISKTEIRHMPP*LANVSY
Trigger: ATAAGAAACATTAGCCAGGCATGGTGGCATGTGCCT...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNTAIGL*WFLELA
Trigger: AGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCCATTGCCATTCTTCTaGAAGTCACCATTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNPLPFF*KSPFRW
Trigger: CCACCGGAATGGTGACTTCCAGAAGAATGGCAATGG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCAGCATATTCCAGGATaGTGCGGATGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYQHIPG*CGWSFS
Trigger: AGAGAAAGACCATCCGCACCATCCTGGAATATGCTG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTTCAAAGACGATTCCTTaGATTTTGTTCAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPSKTIP*ILFKGR
Trigger: CCGCCCCTTGAACAAAATCCAAGGAATCGTCTTTGA...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGCTCGTAAGACACTTTaGAAGGATTGGATGCCACGA +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYARKTL*KDWMPR
Trigger: TCGTGGCATCCAATCCTTCCAAAGTGTCTTACGAGC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCACGTGAAGCCCATGTaGAGAAGATGCGCTTTATGT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYHVKPM*RRCALC
Trigger: ACATAAAGCGCATCTTCTCCACATGGGCTTCACGTG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATAGTAAAGAAACCAAGTaGGCTTGGTTCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNSKETK*AWFRGG
Trigger: GCCGCCTCTGAACCAAGCCCACTTGGTTTCTTTACT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTCTGTCTGTCTGGTTTaGGGATGTACATTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPSVCLV*GCTLAD
Trigger: GTCAGCCAATGTACATCCCCAAACCAGACAGACAGA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTTTTGTCTGTCTGTCTaGTTTGGGGATGTACATTGG +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLFCLSV*FGDVHW
Trigger: CCAATGTACATCCCCAAACCAGACAGACAGACAAAA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATACTAATCTTCACTGTTaGTCTTTTACAGGTTTACGT +
Preference number: 4 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNTNLHC*SFTGLR
Trigger: ACGTAAACCTGTAAAAGACCAACAGTGAAGATTAGT...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAACTAATCTTCACTGTTaGTCTTTTACAGGTTTACGT +
Preference number: 4 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRTNLHC*SFTGLR
Trigger: ACGTAAACCTGTAAAAGACCAACAGTGAAGATTAGT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCTTTTTGCTAAACTGTaGGCAACATCTGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTILFAKL*ATSEKR
Trigger: TCTTTTCTCAGATGTTGCCCACAGTTTAGCAAAAAG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGAATTGTCTTCAGGCCTaGAATTACAGAGATAGTTTT +
Preference number: 4 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQNCLQA*NYRDSF
Trigger: AAAACTATCTCTGTAATTCCAGGCCTGAAGACAATT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GATGCTGCTTTAGAATGGTGGACAAAACGAATGGAGGAGAAAGAGGAGATGTGGTGCATAAGCTTTCATTaGGATTTATGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: DAALEWWTKRMEEKEEMWCISFH*DLCLRM
Trigger: CATTCTCAGACATAAATCCCAATGAAAGCTTATGCA...CCACATCTCCTCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATAAAGAACCCACAAAGATaGCCAAGACGAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: TQRNTNSLNLLPISKTEIKNPQR*PRRRRS
Trigger: TGATCTTCTTCGTCTTGGTCATCTTTGTGGGTTCTT...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR TCA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTCAACATTGTCAAAGTTaGTCTTCACGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSQHCQS*SSRSSI
Trigger: GATGGAAGAACGTGAAGATCAACTTTGACAATGTTG...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCCAACATTGTCAAAGTTaGTCTTCACGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSQHCQS*SSRSSI
Trigger: GATGGAAGAACGTGAAGATCAACTTTGACAATGTTG...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTTGTATAGAGACTTCCTaGCACATTCAACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPCIETS*HIQLQH
Trigger: ATGCTGCAGTTGAATGTGTCAGGAAGTCTCTATACA...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTAACCCCAGAAGCAAGTaGAAGGAAAGACATTTTCTC +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFNPRSK*KERHFL
Trigger: GAGAAAATGTCTTTCCTTTCACTTGCTTCTGGGGTT...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTGTTGGGGTTCCTTCCTaGTTTCATACACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPAVGVPS*FHTLVS
Trigger: GGATACCAGTGTATGAAAGCAGGAAGGAACCCCAAC...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGTTGGGGTTCCTTCCTaGTTTCATACACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNVGVPS*FHTLVS
Trigger: GGATACCAGTGTATGAAAGCAGGAAGGAACCCCAAC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTGTGCCTCTTCCTGTTaGTTCTTAAGTTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYCASSC*FLSCSN
Trigger: GTTGGAGCAACTTAAGAAGCAACAGGAAGAGGCACA...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTAGGCCTTCCTTCTCATaGCATCTTCTGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPARPSFS*HLLTLT
Trigger: AGTCAGAGTCAGAAGATGGCATGAGAAGGAAGGCCT...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCAGGATGGTGCTCCATTaGCATAAACAGTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPRMVLH*HKQCIQ
Trigger: CTGAATACACTGTTTATGGCAATGGAGCACCATCCT...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGGTGTCATAGGATGGTaGTCCATTGCCATAAACAGT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSGVIGW*SIAINS
Trigger: ACTGTTTATGGCAATGGAGCACCATCCTATGACACC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCATATTCCAGGATGGTaGGGATGGTCTTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNHIPGW*GWSFSA
Trigger: AGCAGAGAAAGACCATCCGCACCATCCTGGAATATG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTTTCTCAATTATATCTaGCAGGAACATTCCCACAAT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIFLNYI*QEHSHN
Trigger: ATTGTGGGAATGTTCCTGGCAGATATAATTGAGAAA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGGCATCTGCAAAGTCTaGCAGCTTACAGTACTCAAT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYGICKV*QLTVLN
Trigger: ATTGAGTACTGTAAGCTGGCAGACTTTGCAGATGCC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATATGCTCCAAGGCATCTaGAAAGTCTGCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNMLQGI*KVCQLT
Trigger: TGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCAT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATCTCCACAGCTGTTCTaGATTGATAATATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRKERGIITEDAQDSSHKSPQLF*IDNIQE
Trigger: TTCCTGAATATTATCAATGCAGAACAGCTGTGGAGA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATCATCTTGCAAAATGTaGAACAATGGCTGTATGTTA +
Preference number: 4 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTSSCKM*NNGCML
Trigger: TAACATACAGCCATTGTTGCACATTTTGCAAGATGA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAAAATCTCATCACTATaGCCTAGTAGCTTAATGACA +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIKISSL*PSSLMT
Trigger: TGTCATTAAGCTACTAGGGCATAGTGATGAGATTTT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTATTTGGCAAAGCATTaGCACTTACCCACTCAGCGA +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYYLAKH*HLPTQR
Trigger: TCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATA...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTCCCAATCAAAGCCTTTaGTGCCATTTTCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPPNQSL*CHFQDS
Trigger: GCTATCTTGAAAATGGCACCAAAGGCTTTGATTGGG...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTGACATGTTCAAATTGTaGTGTCATAGGATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVDMFKL*CHRMVL
Trigger: GAGCACCATCCTATGACACCACAATTTGAACATGTC...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTGACATGTTCAAATTGTaGTGTCATAGGATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFDMFKL*CHRMVL
Trigger: GAGCACCATCCTATGACACCACAATTTGAACATGTC...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAGACCTCTTCTACTTCTaGTTTGATATCAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: SKLIFTFFHLISVLFPSIDLFYF*FDINGA
Trigger: AGCACCATTGATATCAAACCAGAAGTAGAAGAGGTC...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCGACCTCTTCTACTTCTaGTTTGATATCAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSDLFYF*FDINGA
Trigger: AGCACCATTGATATCAAACCAGAAGTAGAAGAGGTC...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATAACGAGCACAATGTTTaGAATCGGCCTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNNEHNV*NRPEQV
Trigger: GACTTGCTCAGGCCGATTCCAAACATTGTGCTCGTT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTGTGCAGTGATACTGTaGCTGCGCTGCTCTTTGATT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNCAVIL*LRCSLI
Trigger: AATCAAAGAGCAGCGCAGCCACAGTATCACTGCACA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGCACAGAGCTGAACAATaGAAACTCTGTTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLHRAEQ*KLCCKT
Trigger: AGTTTTGCAACAGAGTTTCCATTGTTCAGCTCTGTG...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAATTGTCTTCAGGCCTaGAATTACAGAGATAGTTTT +
Preference number: 4 (lower is better)
Translates to: PREAHVEKMRFMSKKLTINCLQA*NYRDSF
Trigger: AAAACTATCTCTGTAATTCCAGGCCTGAAGACAATT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp TCCAAGTCTCTTAAATTTGTCTCTGATACTGGATTAGTTAACTGGGTAGATCTCGCTTTTTCAATAGCATaGATGGAATGGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SKSLKFVSDTGLVNWVDLAFSIA*MEWGLH
Trigger: ATGCAGCCCCCATTCCATCCATGCTATTGAAAAAGC...GAGATCTACCCAGTTAACTAATCCAGTATCAGAGACAAATTTAAGAGACTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637709.2
3UTR CAA 72 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTaGGGATCAAAGTCTCCCCCATGTACTGGACACAGA +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSH*GSKSPPCTGHR
Trigger: TCTGTGTCCAGTACATGGGGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGAATGTATAAATCCCTGTaGACGTGTACTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRMYKSL*TCTPHS
Trigger: AGAATGTGGAGTACACGTTCACAGGGATTTATACAT...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR TCA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTTCTACTTCTGGTTTaGTATCAATGGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPLLLLV*YQWCFL
Trigger: AAGGAAGCACCATTGATATCAAACCAGAAGTAGAAG...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR TCA 90 bp TTCTTCGGTCATGAAGATGTCCTGACCTCCGAACTTTTTCTTTTGTTGATTGAACTTCTACTTCTGGTTTaGTATCAATGGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FFGHEDVLTSELFLLLIELLLLV*YQWCFL
Trigger: AAGGAAGCACCATTGATATCAAACCAGAAGTAGAAG...TTCAATCAACAAAAGAAAAAGTTCGGAGGTCAGGACATCTTCATGACCGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCTAAGTTGCATTGACTaGTGTGGAACATGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSLSCID*CGTCSN
Trigger: GTTACTGCATGTTCCACATCAGTCAATGCAACTTAG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGTCAATTCTCCAGTATaGAGGCTAAACGATCGTCAT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSVNSPV*RLNDRH
Trigger: ATGACGATCGTTTAGCCTTCATACTGGAGAATTGAC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCCCCATAACTCCCAATaGAAGGTCATTTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPPHNSQ*KVILSS
Trigger: GGAACTTAAAATGACCTTTCATTGGGAGTTATGGGG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTGTATAGAGACTTCCTaGCACATTCAACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSCIETS*HIQLQH
Trigger: ATGCTGCAGTTGAATGTGTCAGGAAGTCTCTATACA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCAAAAACGTCATCACTaGTTCTTTCAGTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPQKRHH*FFQFDA
Trigger: GGCATCGAACTGAAAGAATCAGTGATGACGTTTTTG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTCAGCTGAAGAGGGACTaGGGAAAGTTAGAAATTAGA +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLQLKRD*GKLEIR
Trigger: TCTAATTTCTAACTTTCCTCAGTCCCTCTTCAGCTG...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGAATCAAAGCCTTTGGTaGCATTTTCAAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLNQSLW*HFQDSS
Trigger: AGAGCTATCTTGAAAATGGCACCAAAGGCTTTGATT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACAGGATGGTGCTCCATTaGCATAAACAGTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYRMVLH*HKQCIQ
Trigger: CTGAATACACTGTTTATGGCAATGGAGCACCATCCT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTGTTCTCCATCTGCTTaGTTTGAGTGTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNCSPSA*FECLSP
Trigger: TGGAGACAGACACTCAAAGCAAGCAGATGGAGAACA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTCGATACCAGCCTCGTaGTTCACATATGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSSIPAS*FTYAKL
Trigger: CAATTTTGCATATGTGAAGCACGAGGCTGGTATCGA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNAIFSS*SSFVSY
Trigger: ATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCATGCAGTAACCACCTaGCCAAGCATTAGAAAATCT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSHAVTT*PSIRKS
Trigger: AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCTTCTGATCACGGCATaGCATCATGCAAATCATTTC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYLLITA*HHANHF
Trigger: GAAATGATTTGCATGATGGCATGCCGTGATCAGAAG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACATAGAAAGCTCTGCTTaGCGACTTACTGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYIESSA*RLTVVC
Trigger: ACAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTAT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCATCATTACAGAAGATaGCCAGGACTCAAGTCACAA +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSHHYRR*PGLKSQ
Trigger: TTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTCCCAATCAAAGCCTTTaGTGCCATTTTCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLPNQSL*CHFQDS
Trigger: GCTATCTTGAAAATGGCACCAAAGGCTTTGATTGGG...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTGATTGGCGATACAGTTaGCCTTCTTTTCATACAACT +
Preference number: 4 (lower is better)
Translates to: FFHLISVLFPSISFSHSVDWRYS*PSFHTT
Trigger: AGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATC...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCGATTGGCGATACAGTTaGCCTTCTTTTCATACAACT +
Preference number: 4 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPDWRYS*PSFHTT
Trigger: AGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATC...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CCA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTATTAGTAGTGTCCTGTaGTGTATGGATCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: SSIYGTISASLSPIILCPISSVL*CMDLMH
Trigger: ATGCATGAGATCCATACACCACAGGACACTACTAAT...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCTTGCCGACTTACTGTaGTTTGTTCTATGCAAAACT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFLADLL*FVLCKT
Trigger: AGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCACAGAGCTGAACAATaGAAACTCTGTTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFHRAEQ*KLCCKT
Trigger: AGTTTTGCAACAGAGTTTCCATTGTTCAGCTCTGTG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCATGTATAAATCCCTGTaGACGTGTACTCCACATTCT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSMYKSL*TCTPHS
Trigger: AGAATGTGGAGTACACGTTCACAGGGATTTATACAT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTTCCTTTGCACTCTTTaGGCTGAGTTTAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSFLCTL*AEFRDF
Trigger: GAAATCTCTAAACTCAGCTCAAAGAGTGCAAAGGAA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTTTCCTTTGCACTCTTTaGGCTGAGTTTAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLFLCTL*AEFRDF
Trigger: GAAATCTCTAAACTCAGCTCAAAGAGTGCAAAGGAA...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTATGCTGAGCAGTGACTaGTTCATGATGGAAAATTTC +
Preference number: 4 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLMLSSD*FMMENF
Trigger: GAAATTTTCCATCATGAATCAGTCACTGCTCAGCAT...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR TCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCTTCTACTTCTGGTTTaGTATCAATGGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYLLLLV*YQWCFL
Trigger: AAGGAAGCACCATTGATATCAAACCAGAAGTAGAAG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR TCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCTTCTACTTCTGGTTTaGTATCAATGGTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSLLLLV*YQWCFL
Trigger: AAGGAAGCACCATTGATATCAAACCAGAAGTAGAAG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTGTAAAGGTTCCAGCATaGCAGGAACTGTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPAVKVPA*QELCRN
Trigger: ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTAC...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATAGGATGGTGCTCCATTaGCATAAACAGTGTATTCAG +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNRMVLH*HKQCIQ
Trigger: CTGAATACACTGTTTATGGCAATGGAGCACCATCCT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCATCTAGTTTATCTTTaGTGCCTTCAGGATCCGACT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNHLVYL*CLQDPT
Trigger: AGTCGGATCCTGAAGGCAGCAAAGATAAACTAGATG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp GAAGTGTTAGAAAGAAATAGACTAACATGCTATCTCAAGGAGTTTATACCAGCTCCCAATCAAAGCCTTTaGTGCCATTTTCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: EVLERNRLTCYLKEFIPAPNQSL*CHFQDS
Trigger: GCTATCTTGAAAATGGCACCAAAGGCTTTGATTGGG...AGCTGGTATAAACTCCTTGAGATAGCATGTTAGTCTATTTCTTTCTAACACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATCCCAATCAAAGCCTTTaGTGCCATTTTCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNPNQSL*CHFQDS
Trigger: GCTATCTTGAAAATGGCACCAAAGGCTTTGATTGGG...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGATTGGCGATACAGTTaGCCTTCTTTTCATACAACT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSDWRYS*PSFHTT
Trigger: AGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCATTAGTAGTGTCCTGTaGTGTATGGATCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSISSVL*CMDLMH
Trigger: ATGCATGAGATCCATACACCACAGGACACTACTAAT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGCAAAACTAGTCTGGTaGACTGTGAAATTACCTTCA +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYAKLVW*TVKLPS
Trigger: TGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGGCTTCGTTAATATTTaGCAAAGCATTGCCACTTAC +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYGFVNI*QSIATY
Trigger: GTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCACAGAGCTGAACAATaGAAACTCTGTTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYHRAEQ*KLCCKT
Trigger: AGTTTTGCAACAGAGTTTCCATTGTTCAGCTCTGTG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCTTTCTCAATTATATCTaGCAGGAACATTCCCACAAT +
Preference number: 4 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFFLNYI*QEHSHN
Trigger: ATTGTGGGAATGTTCCTGGCAGATATAATTGAGAAA...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTAGTTTAGCCAAATCTTaGATAGACGTGGTTAGAATT +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFSLAKS*IDVVRI
Trigger: AATTCTAACCACGTCTATGCAAGATTTGGCTAAACT...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTAAAATCTCATCACTATaGCCTAGTAGCTTAATGACA +
Preference number: 4 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFKISSL*PSSLMT
Trigger: TGTCATTAAGCTACTAGGGCATAGTGATGAGATTTT...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCATCTATATATATATGTaGAGTGATACTGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPIYIYM*SDTVAA
Trigger: CGCAGCCACAGTATCACTGCACATATATATATAGAT...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTTTCTCAAGCATTTCTaGCATTTCCGCATAAACAGA +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPFLKHF*HFRINR
Trigger: TCTGTTTATGCGGAAATGGCAGAAATGCTTGAGAAA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATATTAGTAGTGTCCTGTaGTGTATGGATCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNISSVL*CMDLMH
Trigger: ATGCATGAGATCCATACACCACAGGACACTACTAAT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTATGCAAAACTAGTCTaGTGGACTGTGAAATTACCT +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPYAKLV*WTVKLP
Trigger: AGGTAATTTCACAGTCCACCAGACTAGTTTTGCATA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CCA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCTATGCAAAACTAGTCTaGTGGACTGTGAAATTACCT +
Preference number: 4 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSYAKLV*WTVKLP
Trigger: AGGTAATTTCACAGTCCACCAGACTAGTTTTGCATA...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR GCA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTCTCCACAGCTGTTCTaGATTGATAATATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNSPQLF*IDNIQE
Trigger: TTCCTGAATATTATCAATGCAGAACAGCTGTGGAGA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR GCA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTCATCTTGCAAAATGTaGAACAATGGCTGTATGTTA +
Preference number: 4 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPSSCKM*NNGCML
Trigger: TAACATACAGCCATTGTTGCACATTTTGCAAGATGA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS GCA 90 bp GGACAGGTCAGCTCCCTGCAGGGCGCGCCCGCTCGCCCGCTCGCCTaGAGCGCGCCGCCCGCCCGCAGGCTCTCAGACTCGCGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: GQVSSLQGAPARPLA*SAPPARRLSDSRLR
Trigger: GCGGAGACGCGAGTCTGAGAGCCTGCGGGCGGGCGGCGCGCTGCAGGCGAGCGGGCGAGCGGGCGCGCCCTGCAGGGAGCTGACCTGTCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662684.1
ENST00000667214.1
CDS GCA 90 bp TCAATCAGCGGCAGGTGGAGGCTCGTGTTTCAGCCCACAGGGACCTaGTGCCAGGAGCGGGGAGGCGCTGCCTCCCTGACAGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SISGRWRLVFQPTGT*CQERGGAASLTAPR
Trigger: CCTGGGGGCTGTCAGGGAGGCAGCGCCTCCCCGCTCCTGGCAGCAGGTCCCTGTGGGCTGAAACACGAGCCTCCACCTGCCGCTGATTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546961.1
CDS CCA 90 bp CGTTGCAGTCCACCGTGCTGTTGCGCTTCACGCTGCGCCGCAGGCTaGGGAAGATGCGCGAGGAGCGGCTGCCCTGGCTGTAGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: RCSPPCCCASRCAAG*GRCARSGCPGCSRC
Trigger: ACAGCGGCTACAGCCAGGGCAGCCGCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTGCAACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000551216.2
ENST00000599343.5
ENST00000627620.5
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS GCA 90 bp CGTGTTTCAGCCCACAGGGACCTGCTGCCAGGAGCGGGGAGGCGCTaGCTCCCTGACAGCCCCCAGGCCACCTCAGTCTTTCCGATCCTC +
Preference number: 5 (lower is better)
Translates to: RVSAHRDLLPGAGRR*LPDSPQATSVFPIL
Trigger: GAGGATCGGAAAGACTGAGGTGGCCTGGGGGCTGTCAGGGAGGCAGCGCCTCCCCGCTCCTGGCAGCAGGTCCCTGTGGGCTGAAACACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546961.1
CDS CCA 90 bp ATTTCCACCTCAGTTGTAGCCTCTGGCAGGAGACGCCCGCCGATGTaGGAGCCGGGGCCGCCGATGAGGGACACCACGCCGTTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: ISTSVVASGRRRPPM*EPGPPMRDTTPLQS
Trigger: GGACTGCAACGGCGTGGTGTCCCTCATCGGCGGCCCCGGCTCCCACATCGGCGGGCGTCTCCTGCCAGAGGCTACAACTGAGGTGGAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACAGTCCACCGTGCTGTaGCGCTTCACGCTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAQSTVL*RFTLRR
Trigger: GCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAACAGTCCACCGTGCTGTaGCGCTTCACGCTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQQSTVL*RFTLRR
Trigger: GCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTG...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS GCA 90 bp TCAGGGCCTGGTGGTGCAAGCAGCCGCGCTGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTATGCTGCGTCCAGGACAGGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SGPGGASSRAAIFSS*SSFVSYAASRTGQL
Trigger: CAGCTGACCTGTCCTGGACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000637709.2
ENST00000668547.1
CDS GCA 90 bp TCAGGGCCTGGTGGTGCAAGCAGCCGCGCTGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTATGCTGCGTCCAGGACAGGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: SGPGGASSRAAIFSS*SSFVSYAASRTGQL
Trigger: GAGCTGACCTGTCCTGGACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000550891.4
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCACTTCCAGGTCGCTGTTaGGCTTGGGCTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSLPGRC*AWACCP
Trigger: AGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAG...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCATCTGTGGCAGCCAGGTaGTCTGCACTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWASVAAR*SALKEL
Trigger: GAGCTCCTTCAGTGCAGACAACCTGGCTGCCACAGA...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCAAGCAGAAGGCCGATGTaGAACAGGGCAGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWASRRPM*NRAGKD
Trigger: GTCCTTGCCTGCCCTGTTCAACATCGGCCTTCTGCT...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAAAGGTCGCTGTTTGGCTaGGGCTTGCTGTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: HGILIPSGQAPGPEAFSQRSLFG*GLLSSS
Trigger: CGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCT...TTGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGCAGTCCACCGTGCTGTaGCGCTTCACGCTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWQSTVL*RFTLRR
Trigger: GCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTG...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGAGGGACACCACGCCGTaGCAGTCCACCGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLRDTTP*QSTVLL
Trigger: CAACAGCACGGTGGACTGCAACGGCGTGGTGTCCCT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACAGGGACACCACGCCGTaGCAGTCCACCGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: LLASLTSPCLALLAHTSHRDTTP*QSTVLL
Trigger: CAACAGCACGGTGGACTGCAACGGCGTGGTGTCCCT...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCACAAACCGGTTCAGACTaGGTCATTGGTGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSQTGSD*VIGGGS
Trigger: GGAGCCACCACCAATGACCAAGTCTGAACCGGTTTG...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CCATGGCATTCTCATTCCATCCGGGCAGGCTCCGGGGCCAGAGGCATTCAGTCAGGCCACACAACACACTaGTTTCGAAGGTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: PWHSHSIRAGSGARGIQSGHTTH*FRRFPM
Trigger: CATGGGGAACCTTCGAAACAAGTGTGTTGTGTGGCC...TGACTGAATGCCTCTGGCCCCGGAGCCTGCCCGGATGGAATGAGAATGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAACAGTCCACCGTGCTGTaGCGCTTCACGCTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQQSTVL*RFTLRR
Trigger: GCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTG...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATGATACCTCCTCCTGCTaGCGACGCAGTGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHDTSSC*RRSVVV
Trigger: CACAACCACACTGCGTCGCAAGCAGGAGGAGGTATC...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCGCAGAGTGGAGGCTGTaGGGCATCGCACATGCCCTA +
Preference number: 5 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSAEWRL*GIAHAL
Trigger: TAGGGCATGTGCGATGCCCAACAGCCTCCACTCTGC...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS TCA 90 bp AGGTCGCTGTTTGGCTTGGGCTTGCTGTCCTCATCGTCCTCCCGATaGCTGCCATCGGCCTTTGGTGGTTTCTTGAGCTTGCTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RSLFGLGLLSSSSSR*LPSAFGGFLSLLSA
Trigger: TGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000599343.5
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS CCA 90 bp CCCGTAGATGAAAGGCAAACTCTTCCCTGCTTCCAGGTCGCTGTTTaGCTTGGGCTTGCTGTCCTCATCGTCCTCCCGATGACTGCCATC +
Preference number: 5 (lower is better)
Translates to: PVDERQTLPCFQVAV*LGLAVLIVLPMTAI
Trigger: GATGGCAGTCATCGGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGCAGGGAAGAGTTTGCCTTTCATCTACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000599343.5
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACTCAGGGGTGAAAGGCTaGAAACTATCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDSGVKG*KLSGPG
Trigger: ACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGA...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCCTGTTTGGCTTGGGCTaGCTGTCCTCATCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: REVLWASKHRPVVGNATCLFGLG*LSSSSS
Trigger: GGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAG...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCCTTCCAGGTCGCTGTTaGGCTTGGGCTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: REVLWASKHRPVVGNATCLPGRC*AWACCP
Trigger: AGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAG...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGCTGAAGATGCTGCTCTaGCTGTTGTGGCGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLLKMLL*LLWRER
Trigger: CCTCTCCCGCCACAACAGCAAGAGCAGCATCTTCAG...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCTGAAGATGCTGCTCTaGCTGTTGTGGCGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSLKMLL*LLWRER
Trigger: CCTCTCCCGCCACAACAGCAAGAGCAGCATCTTCAG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCAGGGACACCACGCCGTaGCAGTCCACCGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVRDTTP*QSTVLL
Trigger: CAACAGCACGGTGGACTGCAACGGCGTGGTGTCCCT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCTCTGTGGCAGCCAGGTaGTCTGCACTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSSVAAR*SALKEL
Trigger: GAGCTCCTTCAGTGCAGACAACCTGGCTGCCACAGA...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GGCATTCACCACCACCCTCGCCCTTTACAGTCTCTGCAGGTCCCAGAAGTCCCCGTCAAGTTGGGGTTGTaGATGAAGGACATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GIHHHPRPLQSLQVPEVPVKLGL*MKDMWS
Trigger: GGACCACATGTCCTTCATCAACAACCCCAACTTGAC...GGGGACTTCTGGGACCTGCAGAGACTGTAAAGGGCGAGGGTGGTGGTGAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548086.3
CDS CCA 90 bp GGGCTTGCTGTCCTCATCGTCCTCCCGATGACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCTCTCAGCAATGCGCCTCTCAATGTT +
Preference number: 5 (lower is better)
Translates to: GLAVLIVLPMTAIGL*WFLELALSNAPLNV
Trigger: AACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGAGGACAGCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000599343.5
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCATGCTGCTCTTGCTGTaGTGGCGGGAGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVMLLLL*WRERKG
Trigger: GCCCTTCCTCTCCCGCCACAACAGCAAGAGCAGCAT...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCATGCTGCTCTTGCTGTaGTGGCGGGAGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPMLLLL*WRERKG
Trigger: GCCCTTCCTCTCCCGCCACAACAGCAAGAGCAGCAT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGCTCAACGCAAACATTTaGAGCACACACTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: DLPKATQRASGQARDRTQLNANI*STHSQV
Trigger: CACCTGTGAGTGTGTGCTCAAAATGTTTGCGTTGAG...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGAGGGTACGAATCCCTTaGGCGCCTTTGATCAGACGC +
Preference number: 5 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLRVRIP*APLIRR
Trigger: GCGTCTGATCAAAGGCGCCAAAGGGATTCGTACCCT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGGTCGCTTTAGGGGCTTaGACTGGGAGTTTGTTTATC +
Preference number: 5 (lower is better)
Translates to: DLPKATQRASGQARDRTQVALGA*TGSLFI
Trigger: GATAAACAAACTCCCAGTCAAAGCCCCTAAAGCGAC...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGCAGAGTGGAGGCTGTaGGGCATCGCACATGCCCTA +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPAEWRL*GIAHAL
Trigger: TAGGGCATGTGCGATGCCCAACAGCCTCCACTCTGC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS TCA 90 bp CCTCATCGTCCTCCCGATGACTGCCATCGGCCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGCGCCTCTCAATGTTTGCCAGTGACT +
Preference number: 5 (lower is better)
Translates to: PHRPPDDCHRPLVVS*ACSQQCASQCLPVT
Trigger: AGTCACTGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000599343.5
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS CCA 90 bp CTTGCTGTCCTCATCGTCCTCCCGATGACTGCCATCGGCCTTTGGTaGTTTCTTGAGCTTGCTCTCAGCAATGCGCCTCTCAATGTTTGC +
Preference number: 5 (lower is better)
Translates to: LAVLIVLPMTAIGLW*FLELALSNAPLNVC
Trigger: GCAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGAGGACAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000599343.5
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGCTGTTTGGCTTGGGCTaGCTGTCCTCATCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWLFGLG*LSSSSS
Trigger: GGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAG...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGCTTCCAGGTCGCTGTTaGGCTTGGGCTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWLPGRC*AWACCP
Trigger: AGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAG...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CTGCTTTCATACACTGGTATCCCTCTGGGCATTGCCCAGCATCAGAACTGTTCCAACTGCAACCAGGCCTaGGGGGATGTCCCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: LLSYTGIPLGIAQHQNCSNCNQA*GDVPVD
Trigger: ATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTT...GGAACAGTTCTGATGCTGGGCAATGCCCAGAGGGATACCAGTGTATGAAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCAACTGCAACCAGGCCTaGGGGGATGTCCCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPNCNQA*GDVPVD
Trigger: ATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTAACTGCAACCAGGCCTaGGGGGATGTCCCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGNCNQA*GDVPVD
Trigger: ATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTT...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCAGTCCACCGTGCTGTaGCGCTTCACGCTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIQSTVL*RFTLRR
Trigger: GCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTAGGGACACCACGCCGTaGCAGTCCACCGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFRDTTP*QSTVLL
Trigger: CAACAGCACGGTGGACTGCAACGGCGTGGTGTCCCT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGCGTGCACCTTTAGTTaGGTCCAGGCCACACCCTTC +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVACTFS*VQATPF
Trigger: GAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATTGCCATTCTTCTGGAAGTCACCATTCCGGTGGATGTCTGCACCGGTGTGATGCGTGCACCTTTAGTTaGGTCCAGGCCACACCCTTC +
Preference number: 5 (lower is better)
Translates to: HCHSSGSHHSGGCLHRCDACTFS*VQATPF
Trigger: GAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGC...ATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGAATGGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCCGCTGGTTGTGCCATaGCCATTCTTCTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSPLVVP*PFFWKS
Trigger: TGACTTCCAGAAGAATGGCAATGGCACAACCAGCGG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATTGGCAGATCCATAGCGATGAGCTCAATGGTATTGGGCTTGGGCACTCGGAGTTGACCTGGCAGCACTaGAACCGCTGGACACAACCT +
Preference number: 5 (lower is better)
Translates to: HWQIHSDELNGIGLGHSELTWQH*NRWTQP
Trigger: AGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAA...CTCCGAGTGCCCAAGCCCAATACCATTGAGCTCATCGCTATGGATCTGCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGATACCTCCTCCTGCTaGCGACGCAGTGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGDTSSC*RRSVVV
Trigger: CACAACCACACTGCGTCGCAAGCAGGAGGAGGTATC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTTGCGAGAGCCCCTTaGATTTCTCTTCCCTCTATT +
Preference number: 5 (lower is better)
Translates to: DLPKATQRASGQARDRTQFARAP*ISLPSI
Trigger: AATAGAGGGAAGAGAAATCAAAGGGGCTCTCGCAAA...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCTCTTTAACTTCTCCTaGCCTGGCTCTGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: LLASLTSPCLALLAHTSHLFNFS*PGSAGT
Trigger: TGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAG...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGGGTGGTTTCTTGAGCTaGCTCTCAGCAATGCGCCTC +
Preference number: 5 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWGGFLS*LSAMRL
Trigger: GAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACC...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGGTGGTTTCTTGAGCTaGCTCTCAGCAATGCGCCTC +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPGGFLS*LSAMRL
Trigger: GAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGAGGTCGCTGTTTGGCTaGGGCTTGCTGTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVRSLFG*GLLSSS
Trigger: CGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCT...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACACTTCCAGGTCGCTGTTaGGCTTGGGCTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTLPGRC*AWACCP
Trigger: AGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAG...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGAACTGCAACCAGGCCTaGGGGGATGTCCCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVNCNQA*GDVPVD
Trigger: ATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTT...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGCTGAAGATGCTGCTCTaGCTGTTGTGGCGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVLKMLL*LLWRER
Trigger: CCTCTCCCGCCACAACAGCAAGAGCAGCATCTTCAG...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACAGTCCACCGTGCTGTaGCGCTTCACGCTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: LRKERGIITEDAQDSSHKQSTVL*RFTLRR
Trigger: GCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGAGGGACACCACGCCGTaGCAGTCCACCGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQRDTTP*QSTVLL
Trigger: CAACAGCACGGTGGACTGCAACGGCGTGGTGTCCCT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAGCGTGCACCTTTAGTTaGGTCCAGGCCACACCCTTC +
Preference number: 5 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTACTFS*VQATPF
Trigger: GAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGC...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GGGTTCCCACAATCTCCCTTAAAGCCACTCCCTGGGTGTTCCTTATCTAGGCTGTGCCAATGCCGCTGGTaGTGCCATTGCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: GFPQSPLKPLPGCSLSRLCQCRW*CHCHSS
Trigger: AGAAGAATGGCAATGGCACAACCAGCGGCATTGGCA...CAGCCTAGATAAGGAACACCCAGGGAGTGGCTTTAAGGGAGATTGTGGGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTTGACCTGGCAGCACTaGAACCGCTGGACACAACCT +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVLTWQH*NRWTQP
Trigger: AGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCAGCCAACACCAGGCATaGGTGAAGAACTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSSQHQA*VKNLTK
Trigger: CTTCGTCAAGTTCTTCACCAATGCCTGGTGTTGGCT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTCAATGGTATTGGGCTaGGGCACTCGGAGAGGATGC +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGSMVLG*GTRRGC
Trigger: GCATCCTCTCCGAGTGCCCAAGCCCAATACCATTGA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGATACCTCCTCCTGCTaGCGACGCAGTGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKDTSSC*RRSVVV
Trigger: CACAACCACACTGCGTCGCAAGCAGGAGGAGGTATC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GACTTGCCCAAGGCCACACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGAACGGATCCATCTGCTaGTTGGATTGGGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: DLPKATQRASGQARDRTQNGSIC*LDWVCF
Trigger: AAAACAAACCCAATCCAACAAGCAGATGGATCCGTT...CTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTGTGGCCTTGGGCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATGATCTTACAGCTCTGTaGCCCATCTCAAGACCTAAG +
Preference number: 5 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHDLTAL*PISRPK
Trigger: CTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATC...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTAGGTCGCTGTTTGGCTaGGGCTTGCTGTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFRSLFG*GLLSSS
Trigger: CGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGGCCACACAACACACTaGTTTCGAAGGTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPGHTTH*FRRFPM
Trigger: CATGGGGAACCTTCGAAACAAGTGTGTTGTGTGGCC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGGCCACACAACACACTaGTTTCGAAGGTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVGHTTH*FRRFPM
Trigger: CATGGGGAACCTTCGAAACAAGTGTGTTGTGTGGCC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAATGCTGCTCTTGCTGTaGTGGCGGGAGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRMLLLL*WRERKG
Trigger: GCCCTTCCTCTCCCGCCACAACAGCAAGAGCAGCAT...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATATGCTGCTCTTGCTGTaGTGGCGGGAGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDMLLLL*WRERKG
Trigger: GCCCTTCCTCTCCCGCCACAACAGCAAGAGCAGCAT...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTCTGAAGATGCTGCTCTaGCTGTTGTGGCGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVALKMLL*LLWRER
Trigger: CCTCTCCCGCCACAACAGCAAGAGCAGCATCTTCAG...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCCGCTGGTTGTGCCATaGCCATTCTTCTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVPLVVP*PFFWKS
Trigger: TGACTTCCAGAAGAATGGCAATGGCACAACCAGCGG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCTGCCAATGCCGCTGGTaGTGCCATTGCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPCQCRW*CHCHSS
Trigger: AGAAGAATGGCAATGGCACAACCAGCGGCATTGGCA...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTGCCAATGCCGCTGGTaGTGCCATTGCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVCQCRW*CHCHSS
Trigger: AGAAGAATGGCAATGGCACAACCAGCGGCATTGGCA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GTCCATCCAGCCTTTGAAGGTTGCTACTTGAAGAAGGGCCAGGTATCCTGCCCCACAGTCAAGTTGGGGTaGTTGATGAAGGACATGTGG +
Preference number: 5 (lower is better)
Translates to: VHPAFEGCYLKKGQVSCPTVKLG*LMKDMW
Trigger: CCACATGTCCTTCATCAACAACCCCAACTTGACTGT...GGGGCAGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGACAGTCAAGTTGGGGTaGTTGATGAAGGACATGTGG +
Preference number: 5 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLTVKLG*LMKDMW
Trigger: CCACATGTCCTTCATCAACAACCCCAACTTGACTGT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCTACCAGCCATCTCGCTCCAGAGTGGAGCTACTGGAGCGGACTAGAGTGGGCACCAACATTGTCAAAGTaGATCTTCACGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: PTSHLAPEWSYWSGLEWAPTLSK*IFTFFH
Trigger: ATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG...TGCCCACTCTAGTCCGCTCCAGTAGCTCCACTCTGGAGCGAGATGGCTGGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTCCATCCAGCCTTTGAAGGTTGCTACTTGAAGAAGGGCCAGGTATCCTGCCCCTTTGAAGGTTGCTACTaGAAGAAGGGCCAGGTATCC +
Preference number: 5 (lower is better)
Translates to: VHPAFEGCYLKKGQVSCPFEGCY*KKGQVS
Trigger: GGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAA...GGGGCAGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATCAATGGTATTGGGCTaGGGCACTCGGAGAGGATGC +
Preference number: 5 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQSMVLG*GTRRGC
Trigger: GCATCCTCTCCGAGTGCCCAAGCCCAATACCATTGA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCATGAGCTCAATGGTATaGGGCTTGGGCACTCGGAGA +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPMSSMV*GLGTRR
Trigger: TCTCCGAGTGCCCAAGCCCAATACCATTGAGCTCAT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTATGAGCTCAATGGTATaGGGCTTGGGCACTCGGAGA +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGMSSMV*GLGTRR
Trigger: TCTCCGAGTGCCCAAGCCCAATACCATTGAGCTCAT...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCGACACTTTGGAAGGATaGGATGCCACGAACCGCTCT +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVDTLEG*DATNRS
Trigger: AGAGCGGTTCGTGGCATCCAATCCTTCCAAAGTGTC...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGACACTTTGGAAGGATaGGATGCCACGAACCGCTCT +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGDTLEG*DATNRS
Trigger: AGAGCGGTTCGTGGCATCCAATCCTTCCAAAGTGTC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGACTCTGTTGCAAAACTaGGGCCCCTCCCAACCCAGA +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKTLLQN*GPSQPR
Trigger: TCTGGGTTGGGAGGGGCCCAAGTTTTGCAACAGAGT...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGGTTCAGACTTGGTCATaGGTGGTGGCTCCATGGCAT +
Preference number: 5 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWVQTWS*VVAPWH
Trigger: ATGCCATGGAGCCACCACCAATGACCAAGTCTGAAC...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGTCAGGGGTGAAAGGCTaGAAACTATCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKSGVKG*KLSGPG
Trigger: ACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGA...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCTGTTTGGCTTGGGCTaGCTGTCCTCATCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQLFGLG*LSSSSS
Trigger: GGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ATGTTAGGAGATGGCTCTTCCCAAAGAGGGGCACCATTATCCAAACCTCTAGATCTGTTTGGCTTGGGCTaGCTGTCCTCATCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: MLGDGSSQRGAPLSKPLDLFGLG*LSSSSS
Trigger: GGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAG...ATCTAGAGGTTTGGATAATGGTGCCCCTCTTTGGGAAGAGCCATCTCCTAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCAGGTCGCTGTTTGGCTaGGGCTTGCTGTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGRSLFG*GLLSSS
Trigger: CGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATCTTCCAGGTCGCTGTTaGGCTTGGGCTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNLPGRC*AWACCP
Trigger: AGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAG...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATCTTCCAGGTCGCTGTTaGGCTTGGGCTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: QNCSHRVKVPACQELCRNLPGRC*AWACCP
Trigger: AGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAG...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CAA 90 bp TGGGGGAAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTATCCCTCTGGGCATaGCCCAGCATCAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: WGKRSNGSSKPVQTWSLVVSLWA*PSIRTV
Trigger: AACAGTTCTGATGCTGGGCAATGCCCAGAGGGATAC...CACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGATGCTGCTCTTGCTGTaGTGGCGGGAGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPEMLLLL*WRERKG
Trigger: GCCCTTCCTCTCCCGCCACAACAGCAAGAGCAGCAT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTGTCAAGTTGGGGTTGTaGATGAAGGACATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGVKLGL*MKDMWS
Trigger: GGACCACATGTCCTTCATCAACAACCCCAACTTGAC...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGTCAAGTTGGGGTTGTaGATGAAGGACATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPVKLGL*MKDMWS
Trigger: GGACCACATGTCCTTCATCAACAACCCCAACTTGAC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GTCCATCCAGCCTTTGAAGGTTGCTACTTGAAGAAGGGCCAGGTATCCTGCCCCTCATCTAGTTTATCTTaGCTGCCTTCAGGATCCGAC +
Preference number: 5 (lower is better)
Translates to: VHPAFEGCYLKKGQVSCPSSSLS*LPSGSD
Trigger: GTCGGATCCTGAAGGCAGCAAAGATAAACTAGATGA...GGGGCAGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATAGGATCCACCAAGACTaGCCTAGCCCTTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYRIHQD*PSPSSM
Trigger: CATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCT...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATCATCTGATCTCTGTATaGTTCCCCTCCATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHHLISV*FPSISF
Trigger: AAAGCTTATGGAGGGGAACAATACAGAGATCAGATG...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTATCCCTTTGGCGCCTTaGATCAGACGCAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFIPLAP*IRRKMR
Trigger: GCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGAT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTAGGGTACGAATCCCTTaGGCGCCTTTGATCAGACGC +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFRVRIP*APLIRR
Trigger: GCGTCTGATCAAAGGCGCCAAAGGGATTCGTACCCT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGAGCAGAAGGCCGATGTaGAACAGGGCAGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQSRRPM*NRAGKD
Trigger: GTCCTTGCCTGCCCTGTTCAACATCGGCCTTCTGCT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGAGCAGAAGGCCGATGTaGAACAGGGCAGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVSRRPM*NRAGKD
Trigger: GTCCTTGCCTGCCCTGTTCAACATCGGCCTTCTGCT...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTGATACCTCCTCCTGCTaGCGACGCAGTGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFDTSSC*RRSVVV
Trigger: CACAACCACACTGCGTCGCAAGCAGGAGGAGGTATC...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTAGAAACCAAGTGGGCTaGGTTCAGAGGCGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFRNQVG*VQRRLH
Trigger: ATGGAGCCGCCTCTGAACCAAGCCCACTTGGTTTCT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCTCATTAGGGCAGCATaGGCCTCCATGCATTCACTA +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPLIRAA*ASMHSL
Trigger: TAGTGAATGCATGGAGGCCAATGCTGCCCTAATGAG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCCAAGACAGGCTTCCCTaGTACAGTAAAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSQDRLP*YSKKGH
Trigger: ATGACCCTTTTTACTGTACAAGGGAAGCCTGTCTTG...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTGCACATGCCCTAGCTTaGGGGCACAGGGATAGGGTT +
Preference number: 5 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFAHALA*GHRDRV
Trigger: AACCCTATCCCTGTGCCCCAAAGCTAGGGCATGTGC...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGCAGAGTGGAGGCTGTaGGGCATCGCACATGCCCTA +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPEAEWRL*GIAHAL
Trigger: TAGGGCATGTGCGATGCCCAACAGCCTCCACTCTGC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CACAGCGAGCCAGCGGTCAAGCTAGGGACAGAACACAGTTCTGTCCCTTTTCTGAAGTCCAATAATACTTaGCCCTTCCCTAGCGCCTTT +
Preference number: 5 (lower is better)
Translates to: HSEPAVKLGTEHSSVPFLKSNNT*PFPSAF
Trigger: AAAGGCGCTAGGGAAGGGCAAAGTATTATTGGACTT...CAGAAAAGGGACAGAACTGTGTTCTGTCCCTAGCTTGACCGCTGGCTCGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS TCA 90 bp CATCCAAAAGCGCAGGGAACTCAATTTACAGGATCTTGGGCCCACTaGAAAAACGAGAAGTCAATCAGCGGCAGGTGGAGGCTCGTGTTT +
Preference number: 5 (lower is better)
Translates to: HPKAQGTQFTGSWAH*KNEKSISGRWRLVF
Trigger: AAACACGAGCCTCCACCTGCCGCTGATTGACTTCTCGTTTTTTCAGTGGGCCCAAGATCCTGTAAATTGAGTTCCCTGCGCTTTTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546961.1
CDS GCA 90 bp CATTTCGACCGCTCACTCCACCCTCGCGAGGATCTAGGTAATGAGTaGCAGAGCTCTTGGCACTTTACTGTGTCTCTCCTCTACTTAATA +
Preference number: 5 (lower is better)
Translates to: HFDRSLHPREDLGNE*QSSWHFTVSLLYLI
Trigger: TATTAAGTAGAGGAGAGACACAGTAAAGTGCCAAGAGCTCTGGCACTCATTACCTAGATCCTCGCGAGGGTGGAGTGAGCGGTCGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546961.1
CDS CCA 90 bp CTGAAGAGAGAAATAGAAATAGGCCAGGAAGAACACAGAAATGGCTaGGGTGTTAACAGGAGTGGGGTCCAGACAGACCAAGTGGGATGG +
Preference number: 5 (lower is better)
Translates to: LKREIEIGQEEHRNG*GVNRSGVQTDQVGW
Trigger: CCATCCCACTTGGTCTGTCTGGACCCCACTCCTGTTAACACCCCAGCCATTTCTGTGTTCTTCCTGGCCTATTTCTATTTCTCTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGGTGGTTTCTTGAGCTaGCTCTCAGCAATGCGCCTC +
Preference number: 5 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFGGFLS*LSAMRL
Trigger: GAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTCTTCCAGGTCGCTGTTaGGCTTGGGCTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTILPGRC*AWACCP
Trigger: AGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAG...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGAACTGCAACCAGGCCTaGGGGGATGTCCCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPENCNQA*GDVPVD
Trigger: ATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAAACTGCAACCAGGCCTaGGGGGATGTCCCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTNCNQA*GDVPVD
Trigger: ATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTT...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGGCCACACAACACACTaGTTTCGAAGGTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYGHTTH*FRRFPM
Trigger: CATGGGGAACCTTCGAAACAAGTGTGTTGTGTGGCC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATGTATCCCTCTGGGCATaGCCCAGCATCAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYVSLWA*PSIRTV
Trigger: AACAGTTCTGATGCTGGGCAATGCCCAGAGGGATAC...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTGTATCCCTCTGGGCATaGCCCAGCATCAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFVSLWA*PSIRTV
Trigger: AACAGTTCTGATGCTGGGCAATGCCCAGAGGGATAC...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTGTATCCCTCTGGGCATaGCCCAGCATCAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAVSLWA*PSIRTV
Trigger: AACAGTTCTGATGCTGGGCAATGCCCAGAGGGATAC...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTCTGAAGATGCTGCTCTaGCTGTTGTGGCGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSLKMLL*LLWRER
Trigger: CCTCTCCCGCCACAACAGCAAGAGCAGCATCTTCAG...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACTGAAGATGCTGCTCTaGCTGTTGTGGCGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTLKMLL*LLWRER
Trigger: CCTCTCCCGCCACAACAGCAAGAGCAGCATCTTCAG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCAGTCCACCGTGCTGTaGCGCTTCACGCTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSQSTVL*RFTLRR
Trigger: GCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTCTGTGGCAGCCAGGTaGTCTGCACTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSSVAAR*SALKEL
Trigger: GAGCTCCTTCAGTGCAGACAACCTGGCTGCCACAGA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGCGTGCACCTTTAGTTaGGTCCAGGCCACACCCTTC +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIACTFS*VQATPF
Trigger: GAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGTCAAGTTGGGGTTGTaGATGAAGGACATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKVKLGL*MKDMWS
Trigger: GGACCACATGTCCTTCATCAACAACCCCAACTTGAC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCACAGTCAAGTTGGGGTaGTTGATGAAGGACATGTGG +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPTVKLG*LMKDMW
Trigger: CCACATGTCCTTCATCAACAACCCCAACTTGACTGT...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGTTGACCTGGCAGCACTaGAACCGCTGGACACAACCT +
Preference number: 5 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVLTWQH*NRWTQP
Trigger: AGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAA...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTTGACCTGGCAGCACTaGAACCGCTGGACACAACCT +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQLTWQH*NRWTQP
Trigger: AGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAAC +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQSPSSM*TWQHLN
Trigger: GTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAAC +
Preference number: 5 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFSPSSM*TWQHLN
Trigger: GTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCT...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGAGGATCCACCAAGACTaGCCTAGCCCTTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQRIHQD*PSPSSM
Trigger: CATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCT...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCAGGATCCACCAAGACTaGCCTAGCCCTTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGRIHQD*PSPSSM
Trigger: CATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAAGCCAACACCAGGCATaGGTGAAGAACTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTSQHQA*VKNLTK
Trigger: CTTCGTCAAGTTCTTCACCAATGCCTGGTGTTGGCT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTCCATCCAGCCTTTGAAGGTTGCTACTTGAAGAAGGGCCAGGTATCCTGCCCCCATCTGATCTCTGTATaGTTCCCCTCCATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: VHPAFEGCYLKKGQVSCPHLISV*FPSISF
Trigger: AAAGCTTATGGAGGGGAACAATACAGAGATCAGATG...GGGGCAGGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAAGGCTGGATGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp CATTGGCAGATCCATAGCGATGAGCTCAATGGTATTGGGCTTGGGCACTCGGAGTATCCTGCCCCAACATaGTCAAAGTTGATCTTCACG +
Preference number: 5 (lower is better)
Translates to: HWQIHSDELNGIGLGHSEYPAPT*SKLIFT
Trigger: CGTGAAGATCAACTTTGACAATGTTGGGGCAGGATA...CTCCGAGTGCCCAAGCCCAATACCATTGAGCTCATCGCTATGGATCTGCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTTTGAAGGTTGCTACTaGAAGAAGGGCCAGGTATCC +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVFEGCY*KKGQVS
Trigger: GGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCAGGGTACGAATCCCTTaGGCGCCTTTGATCAGACGC +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGRVRIP*APLIRR
Trigger: GCGTCTGATCAAAGGCGCCAAAGGGATTCGTACCCT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAGCAGAAGGCCGATGTaGAACAGGGCAGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTISRRPM*NRAGKD
Trigger: GTCCTTGCCTGCCCTGTTCAACATCGGCCTTCTGCT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTCAATGGTATTGGGCTaGGGCACTCGGAGAGGATGC +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQSMVLG*GTRRGC
Trigger: GCATCCTCTCCGAGTGCCCAAGCCCAATACCATTGA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGCACCGGTGTGATTGGCGATACAGTTGGCCTTCTTTTCATACAACTCATCCAGATGAGCTCAATGGTATaGGGCTTGGGCACTCGGAGA +
Preference number: 5 (lower is better)
Translates to: CTGVIGDTVGLLFIQLIQMSSMV*GLGTRR
Trigger: TCTCCGAGTGCCCAAGCCCAATACCATTGAGCTCAT...CTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGATACCTCCTCCTGCTaGCGACGCAGTGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTDTSSC*RRSVVV
Trigger: CACAACCACACTGCGTCGCAAGCAGGAGGAGGTATC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGAGAAACCAAGTGGGCTaGGTTCAGAGGCGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVRNQVG*VQRRLH
Trigger: ATGGAGCCGCCTCTGAACCAAGCCCACTTGGTTTCT...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCGATAGAAAGCTCTGCTaGCCGACTTACTGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPDRKLC*PTYCGL
Trigger: CAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATC...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCCTTCCCAGTCTGGTATaGGGTGTAGTACAAAAATTC +
Preference number: 5 (lower is better)
Translates to: REVLWASKHRPVVGNATCLPSLV*GVVQKF
Trigger: GAATTTTTGTACTACACCCAATACCAGACTGGGAAG...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCTCATTAGGGCAGCATaGGCCTCCATGCATTCACTA +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKLIRAA*ASMHSL
Trigger: TAGTGAATGCATGGAGGCCAATGCTGCCCTAATGAG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGCACATGCCCTAGCTTaGGGGCACAGGGATAGGGTT +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSAHALA*GHRDRV
Trigger: AACCCTATCCCTGTGCCCCAAAGCTAGGGCATGTGC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGCACATGCCCTAGCTTaGGGGCACAGGGATAGGGTT +
Preference number: 5 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTAHALA*GHRDRV
Trigger: AACCCTATCCCTGTGCCCCAAAGCTAGGGCATGTGC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GAACCCCTCGCGGTATCGACCCATGCCTGGAGAAAGCCACAATGCAGAGGACATAATGAACGAAGCTTTTaGCTAAACTGTGGGCAACAT +
Preference number: 5 (lower is better)
Translates to: EPLAVSTHAWRKPQCRGHNERSF*LNCGQH
Trigger: ATGTTGCCCACAGTTTAGCAAAAAGCTTCGTTCATT...ATGTCCTCTGCATTGTGGCTTTCTCCAGGCATGGGTCGATACCGCGAGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGAGAGGTTAAGTGACTaGCCCAAGGCCACACAGCGA +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGERLSD*PKATQR
Trigger: TCGCTGTGTGGCCTTGGGCAAGTCACTTAACCTCTC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCTAGCCTCGATCTATTaGTGTTCTTCCTTACACTGT +
Preference number: 5 (lower is better)
Translates to: LLASLTSPCLALLAHTSHLASIY*CSSLHC
Trigger: ACAGTGTAAGGAAGAACACAAATAGATCGAGGCTAG...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTGTTCAGACTTGGTCATaGGTGGTGGCTCCATGGCAT +
Preference number: 5 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVAVQTWS*VVAPWH
Trigger: ATGCCATGGAGCCACCACCAATGACCAAGTCTGAAC...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp GCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACCCTGACATGCTAATTAAAGGATaGGCTATCTTCATGCTGTGT +
Preference number: 5 (lower is better)
Translates to: ASLTSPCLALLAHTSHPDMLIKG*AIFMLC
Trigger: ACACAGCATGAAGATAGCCAATCCTTTAATTAGCAT...GTCAGGGTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CAGAACTGTTCCCACAGAGTAAAGGTTCCAGCATGCCAGGAACTGTGTAGAAATTCAGGGGTGAAAGGCTaGAAACTATCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: QNCSHRVKVPACQELCRNSGVKG*KLSGPG
Trigger: ACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGA...ATTTCTACACAGTTCCTGGCATGCTGGAACCTTTACTCTGTGGGAACAGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGGTGGTTTCTTGAGCTaGCTCTCAGCAATGCGCCTC +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSGGFLS*LSAMRL
Trigger: GAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGGCCACACAACACACTaGTTTCGAAGGTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFGHTTH*FRRFPM
Trigger: CATGGGGAACCTTCGAAACAAGTGTGTTGTGTGGCC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGTATCCCTCTGGGCATaGCCCAGCATCAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGVSLWA*PSIRTV
Trigger: AACAGTTCTGATGCTGGGCAATGCCCAGAGGGATAC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GATGCTGCTTTAGAATGGTGGACAAAACGAATGGAGGAGAAAGAGGAGATGTGGGTATCCCTCTGGGCATaGCCCAGCATCAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: DAALEWWTKRMEEKEEMWVSLWA*PSIRTV
Trigger: AACAGTTCTGATGCTGGGCAATGCCCAGAGGGATAC...CCACATCTCCTCTTTCTCCTCCATTCGTTTTGTCCACCATTCTAAAGCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTATCCCTCTGGGCATaGCCCAGCATCAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQVSLWA*PSIRTV
Trigger: AACAGTTCTGATGCTGGGCAATGCCCAGAGGGATAC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTAGGGACACCACGCCGTaGCAGTCCACCGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SSIYGTISASLSPIILCPRDTTP*QSTVLL
Trigger: CAACAGCACGGTGGACTGCAACGGCGTGGTGTCCCT...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAACTGAGATCTGGAGGTaGTTCATTTCCCCATCGTCA +
Preference number: 5 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTTEIWR*FISPSS
Trigger: TGACGATGGGGAAATGAACAACCTCCAGATCTCAGT...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGACTGAGATCTGGAGGTaGTTCATTTCCCCATCGTCA +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKTEIWR*FISPSS
Trigger: TGACGATGGGGAAATGAACAACCTCCAGATCTCAGT...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCAGGCCACACCCTTCTaGATACGGATCACTGAGATC +
Preference number: 5 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFQATPF*IRITEI
Trigger: GATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTG...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATGCGTGCACCTTTAGTTaGGTCCAGGCCACACCCTTC +
Preference number: 5 (lower is better)
Translates to: VKVDLHVLPSDLCIVPLHACTFS*VQATPF
Trigger: GAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGC...ATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGTGCCAATGCCGCTGGTaGTGCCATTGCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQCQCRW*CHCHSS
Trigger: AGAAGAATGGCAATGGCACAACCAGCGGCATTGGCA...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAAC +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSSPSSM*TWQHLN
Trigger: GTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAAC +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPESPSSM*TWQHLN
Trigger: GTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGAGGATCCACCAAGACTaGCCTAGCCCTTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPERIHQD*PSPSSM
Trigger: CATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTATCCTGCCCCAACATaGTCAAAGTTGATCTTCACG +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGYPAPT*SKLIFT
Trigger: CGTGAAGATCAACTTTGACAATGTTGGGGCAGGATA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTCAATGGTATTGGGCTaGGGCACTCGGAGAGGATGC +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSSMVLG*GTRRGC
Trigger: GCATCCTCTCCGAGTGCCCAAGCCCAATACCATTGA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCATGAGCTCAATGGTATaGGGCTTGGGCACTCGGAGA +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGMSSMV*GLGTRR
Trigger: TCTCCGAGTGCCCAAGCCCAATACCATTGAGCTCAT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GCTGGGTCCTGTCCAAAGGCTGACCCAGTGCAAGGGACTAGATTAGTAGTGTCCAATCATTTCTACGCATaGAACGAGCACAATGTTTGG +
Preference number: 5 (lower is better)
Translates to: AGSCPKADPVQGTRLVVSNHFYA*NEHNVW
Trigger: CCAAACATTGTGCTCGTTCAATGCGTAGAAATGATT...GGACACTACTAATCTAGTCCCTTGCACTGGGTCAGCCTTTGGACAGGACCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGGATAGAAAGCTCTGCTaGCCGACTTACTGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKDRKLC*PTYCGL
Trigger: CAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATC...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATCTTACAGCTCTGTaGCCCATCTCAAGACCTAAG +
Preference number: 5 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQDLTAL*PISRPK
Trigger: CTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATC...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCGAGCACATGGTGTACTaGGCGGGATCTTACAGCTCT +
Preference number: 5 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFEHMVY*AGSYSS
Trigger: AGAGCTGTAAGATCCCGCCAAGTACACCATGTGCTC...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGAGAGCACATGGTGTACTaGGCGGGATCTTACAGCTCT +
Preference number: 5 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDREHMVY*AGSYSS
Trigger: AGAGCTGTAAGATCCCGCCAAGTACACCATGTGCTC...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTGGCTGCGCTGCTCTTaGATTGGCTTCGTTAATATT +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGWLRCS*IGFVNI
Trigger: AATATTAACGAAGCCAATCAAAGAGCAGCGCAGCCA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCTTTGCGAGAGCCCCTTaGATTTCTCTTCCCTCTATT +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVFARAP*ISLPSI
Trigger: AATAGAGGGAAGAGAAATCAAAGGGGCTCTCGCAAA...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTACAATGGAAACTCTGTaGCAAAACTTGGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFTMETL*QNLGPS
Trigger: GGAGGGGCCCAAGTTTTGCAACAGAGTTTCCATTGT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGGAGAGGTTAAGTGACTaGCCCAAGGCCACACAGCGA +
Preference number: 5 (lower is better)
Translates to: LASLIFGKALPLTHSAKMERLSD*PKATQR
Trigger: TCGCTGTGTGGCCTTGGGCAAGTCACTTAACCTCTC...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGAGAGGTTAAGTGACTaGCCCAAGGCCACACAGCGA +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPEERLSD*PKATQR
Trigger: TCGCTGTGTGGCCTTGGGCAAGTCACTTAACCTCTC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS CCA 90 bp TCACTCCACCCTCGCGAGGATCTAGGTAATGAGTGCCAGAGCTCTTaGCACTTTACTGTGTCTCTCCTCTACTTAATATTTTCCTACCAC +
Preference number: 5 (lower is better)
Translates to: SLHPREDLGNECQSS*HFTVSLLYLIFSYH
Trigger: GTGGTAGGAAAATATTAAGTAGAGGAGAGACACAGTAAAGTGCCAAGAGCTCTGGCACTCATTACCTAGATCCTCGCGAGGGTGGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546961.1
CDS-3UTR CAA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGAACTGCAACCAGGCCTaGGGGGATGTCCCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLNCNQA*GDVPVD
Trigger: ATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGGGCCACACAACACACTaGTTTCGAAGGTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPEGHTTH*FRRFPM
Trigger: CATGGGGAACCTTCGAAACAAGTGTGTTGTGTGGCC...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGTATCCCTCTGGGCATaGCCCAGCATCAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSVSLWA*PSIRTV
Trigger: AACAGTTCTGATGCTGGGCAATGCCCAGAGGGATAC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATATCTGTGGCAGCCAGGTaGTCTGCACTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: SKLIFTFFHLISVLFPSISVAAR*SALKEL
Trigger: GAGCTCCTTCAGTGCAGACAACCTGGCTGCCACAGA...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACAGGCCACACCCTTCTaGATACGGATCACTGAGATC +
Preference number: 5 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTQATPF*IRITEI
Trigger: GATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCAGGCCACACCCTTCTaGATACGGATCACTGAGATC +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPEQATPF*IRITEI
Trigger: GATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCCGCTGGTTGTGCCATaGCCATTCTTCTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPEPLVVP*PFFWKS
Trigger: TGACTTCCAGAAGAATGGCAATGGCACAACCAGCGG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTGCCAATGCCGCTGGTaGTGCCATTGCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPECQCRW*CHCHSS
Trigger: AGAAGAATGGCAATGGCACAACCAGCGGCATTGGCA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCGTCAAGTTGGGGTTGTaGATGAAGGACATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGVKLGL*MKDMWS
Trigger: GGACCACATGTCCTTCATCAACAACCCCAACTTGAC...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCTAACATCCTCTGTGTaGAGGTTCTCAAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKLTSSV*RFSKSD
Trigger: GTCTGACTTTGAGAACCTCAACACAGAGGATGTTAG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGTCATCTAGTTTATCTTaGCTGCCTTCAGGATCCGAC +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKSSSLS*LPSGSD
Trigger: GTCGGATCCTGAAGGCAGCAAAGATAAACTAGATGA...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ACCTTGCTTTTCTTCCAATCTCTCCTTCTTAGCCAGAACTTTGCGAGAGCCCCTTTTGAAGGTTGCTACTaGAAGAAGGGCCAGGTATCC +
Preference number: 5 (lower is better)
Translates to: TLLFFQSLLLSQNFARAPFEGCY*KKGQVS
Trigger: GGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAA...AGGGGCTCTCGCAAAGTTCTGGCTAAGAAGGAGAGATTGGAAGAAAAGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTAGCAGAAGGCCGATGTaGAACAGGGCAGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSSRRPM*NRAGKD
Trigger: GTCCTTGCCTGCCCTGTTCAACATCGGCCTTCTGCT...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGATGAGCTCAATGGTATaGGGCTTGGGCACTCGGAGA +
Preference number: 5 (lower is better)
Translates to: LASLIFGKALPLTHSAKMMSSMV*GLGTRR
Trigger: TCTCCGAGTGCCCAAGCCCAATACCATTGAGCTCAT...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTGACACTTTGGAAGGATaGGATGCCACGAACCGCTCT +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSDTLEG*DATNRS
Trigger: AGAGCGGTTCGTGGCATCCAATCCTTCCAAAGTGTC...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGAGAGGTTTTATGGGCCTCTAAGCACCGGCCAGTAGTGGGGAATGCCACATGCCACAGCTGTTCTGCATaGATAATATTCAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: REVLWASKHRPVVGNATCHSCSA*IIFRKF
Trigger: AAACTTCCTGAATATTATCAATGCAGAACAGCTGTG...GCATGTGGCATTCCCCACTACTGGCCGGTGCTTAGAGGCCCATAAAACCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTTCAACTGCAGCATCTaGGCTTTGAAATCCAGTCAT +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGFNCSI*ALKSSH
Trigger: ATGACTGGATTTCAAAGCCAAGATGCTGCAGTTGAA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCCGACTTACTGTGGTTaGTTCTATGCAAAACTAGTC +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVPTYCG*FYAKLV
Trigger: GACTAGTTTTGCATAGAACAAACCACAGTAAGTCGG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCTTCCCAGTCTGGTATaGGGTGTAGTACAAAAATTC +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPLPSLV*GVVQKF
Trigger: GAATTTTTGTACTACACCCAATACCAGACTGGGAAG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCTCATTAGGGCAGCATaGGCCTCCATGCATTCACTA +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQLIRAA*ASMHSL
Trigger: TAGTGAATGCATGGAGGCCAATGCTGCCCTAATGAG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAACAAGACAGGCTTCCCTaGTACAGTAAAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQQDRLP*YSKKGH
Trigger: ATGACCCTTTTTACTGTACAAGGGAAGCCTGTCTTG...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAATTTGCGAGAGCCCCTTaGATTTCTCTTCCCTCTATT +
Preference number: 5 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQFARAP*ISLPSI
Trigger: AATAGAGGGAAGAGAAATCAAAGGGGCTCTCGCAAA...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGGGCCCAGTATGAGCTaGCAGAGTGGAGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFGPSMS*QSGGCW
Trigger: CCAACAGCCTCCACTCTGCAAGCTCATACTGGGCCC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTACAATGGAAACTCTGTaGCAAAACTTGGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFTMETL*QNLGPS
Trigger: GGAGGGGCCCAAGTTTTGCAACAGAGTTTCCATTGT...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGAAGCACATCTCATTCTaGCAGAGGAGACTTAGAACA +
Preference number: 5 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWKHISF*QRRLRT
Trigger: TGTTCTAAGTCTCCTCTGCAAGAATGAGATGTGCTT...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CTATTGGCCTCTTTAACTTCTCCTTGCCTGGCTCTGCTGGCACACACCTCCCACATGCTAATTAAAGGATaGGCTATCTTCATGCTGTGT +
Preference number: 5 (lower is better)
Translates to: LLASLTSPCLALLAHTSHMLIKG*AIFMLC
Trigger: ACACAGCATGAAGATAGCCAATCCTTTAATTAGCAT...GTGGGAGGTGTGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAGGCCAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATCAGGGGTGAAAGGCTaGAAACTATCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LRKERGIITEDAQDSSHKSGVKG*KLSGPG
Trigger: ACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGGGTGGTTTCTTGAGCTaGCTCTCAGCAATGCGCCTC +
Preference number: 5 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLGGFLS*LSAMRL
Trigger: GAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACC...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTCTGTTTGGCTTGGGCTaGCTGTCCTCATCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSIYGTISASLSPIILCPLFGLG*LSSSSS
Trigger: GGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAG...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGACTGTTTGGCTTGGGCTaGCTGTCCTCATCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRLFGLG*LSSSSS
Trigger: GGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAG...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CAA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGAAGGTCGCTGTTTGGCTaGGGCTTGCTGTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRRSLFG*GLLSSS
Trigger: CGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCT...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CAA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATAAACTGCAACCAGGCCTaGGGGGATGTCCCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: TQRNTNSLNLLPISKTEINCNQA*GDVPVD
Trigger: ATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTT...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR CAA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTATGCTGCTCTTGCTGTaGTGGCGGGAGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLMLLLL*WRERKG
Trigger: GCCCTTCCTCTCCCGCCACAACAGCAAGAGCAGCAT...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCATGCTGCTCTTGCTGTaGTGGCGGGAGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSMLLLL*WRERKG
Trigger: GCCCTTCCTCTCCCGCCACAACAGCAAGAGCAGCAT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTCAGATGAGGAAAGTGTaGGCAAATTTATACCAGCAT +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGQMRKV*ANLYQH
Trigger: ATGCTGGTATAAATTTGCCAACACTTTCCTCATCTG...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTTCTGTGGCAGCCAGGTaGTCTGCACTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFSVAAR*SALKEL
Trigger: GAGCTCCTTCAGTGCAGACAACCTGGCTGCCACAGA...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCTCTGTGGCAGCCAGGTaGTCTGCACTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPSVAAR*SALKEL
Trigger: GAGCTCCTTCAGTGCAGACAACCTGGCTGCCACAGA...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGTCAAGTTGGGGTTGTaGATGAAGGACATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIVKLGL*MKDMWS
Trigger: GGACCACATGTCCTTCATCAACAACCCCAACTTGAC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCACAGTCAAGTTGGGGTaGTTGATGAAGGACATGTGG +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGTVKLG*LMKDMW
Trigger: CCACATGTCCTTCATCAACAACCCCAACTTGACTGT...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCTAACATCCTCTGTGTaGAGGTTCTCAAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYLTSSV*RFSKSD
Trigger: GTCTGACTTTGAGAACCTCAACACAGAGGATGTTAG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTCATCTAGTTTATCTTaGCTGCCTTCAGGATCCGAC +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFSSSLS*LPSGSD
Trigger: GTCGGATCCTGAAGGCAGCAAAGATAAACTAGATGA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATTGCCATTCTTCTGGAAGTCACCATTCCGGTGGATGTCTGCACCGGTGTGATTCTTCTACTTCTGGTTaGATATCAATGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: HCHSSGSHHSGGCLHRCDSSTSG*ISMVLP
Trigger: AGGAAGCACCATTGATATCAAACCAGAAGTAGAAGA...ATCACACCGGTGCAGACATCCACCGGAATGGTGACTTCCAGAAGAATGGCAATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp CTGCAACGGAAATATGCTGGTCCCGGCAGCCTCTCTTCTGTTTCTGTATCTGGTTCTTCTACTTCTGGTTaGATATCAATGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LQRKYAGPGSLSSVSVSGSSTSG*ISMVLP
Trigger: AGGAAGCACCATTGATATCAAACCAGAAGTAGAAGA...ACCAGATACAGAAACAGAAGAGAGGCTGCCGGGACCAGCATATTTCCGTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAAC +
Preference number: 5 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLSPSSM*TWQHLN
Trigger: GTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTAGGATCCACCAAGACTaGCCTAGCCCTTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSRIHQD*PSPSSM
Trigger: CATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCT...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAGCCAACACCAGGCATaGGTGAAGAACTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTISQHQA*VKNLTK
Trigger: CTTCGTCAAGTTCTTCACCAATGCCTGGTGTTGGCT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CCCATCTCCAAACCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGCATCTGATCTCTGTATaGTTCCCCTCCATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: PISKPREAHVEKMRFMSKHLISV*FPSISF
Trigger: AAAGCTTATGGAGGGGAACAATACAGAGATCAGATG...CTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGGTTTGGAGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAACATCTGATCTCTGTATaGTTCCCCTCCATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQHLISV*FPSISF
Trigger: AAAGCTTATGGAGGGGAACAATACAGAGATCAGATG...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCCCCCAACATTGTCAAAGTaGATCTTCACGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: WNRPEQVLLSLKKPDCFPPTLSK*IFTFFH
Trigger: ATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG...GGGAAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGCATTAGAAAATCTGTAAGTCTAGGGAGCGGGGTCCTTTGCCCTTGGCAGGTCCCAACATTGTCAAAGTaGATCTTCACGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SIRKSVSLGSGVLCPWQVPTLSK*IFTFFH
Trigger: ATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG...GACCTGCCAAGGGCAAAGGACCCCGCTCCCTAGACTTACAGATTTTCTAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATTATCCTGCCCCAACATaGTCAAAGTTGATCTTCACG +
Preference number: 5 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYYPAPT*SKLIFT
Trigger: CGTGAAGATCAACTTTGACAATGTTGGGGCAGGATA...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTTTTGAAGGTTGCTACTaGAAGAAGGGCCAGGTATCC +
Preference number: 5 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFFEGCY*KKGQVS
Trigger: GGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAA...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGCTTGCCGACTTACTGTGGTTTGTTCTATGCAAAACTAGTCTGGTGGACTGTGCTCAACGCAAACATTTaGAGCACACACTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: CLPTYCGLFYAKLVWWTVLNANI*STHSQV
Trigger: CACCTGTGAGTGTGTGCTCAAAATGTTTGCGTTGAG...CACAGTCCACCAGACTAGTTTTGCATAGAACAAACCACAGTAAGTCGGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGATCCCTTTGGCGCCTTaGATCAGACGCAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLIPLAP*IRRKMR
Trigger: GCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGAT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGGGTACGAATCCCTTaGGCGCCTTTGATCAGACGC +
Preference number: 5 (lower is better)
Translates to: SKLIFTFFHLISVLFPSIRVRIP*APLIRR
Trigger: GCGTCTGATCAAAGGCGCCAAAGGGATTCGTACCCT...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTTAGAAGTTGTCTTTTaGCAGATGAAGCCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFLEVVF*QMKPRL
Trigger: AAGGCGGGGCTTCATCTGCAAAAAGACAACTTCTAA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAAACGGATCCATCTGCTaGTTGGATTGGGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: CCCRSRLKRAGQFLVVQQNGSIC*LDWVCF
Trigger: AAAACAAACCCAATCCAACAAGCAGATGGATCCGTT...TTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAGAGCACATGGTGTACTaGGCGGGATCTTACAGCTCT +
Preference number: 5 (lower is better)
Translates to: LRKERGIITEDAQDSSHKEHMVY*AGSYSS
Trigger: AGAGCTGTAAGATCCCGCCAAGTACACCATGTGCTC...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGTCGCTTTAGGGGCTTaGACTGGGAGTTTGTTTATC +
Preference number: 5 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNVALGA*TGSLFI
Trigger: GATAAACAAACTCCCAGTCAAAGCCCCTAAAGCGAC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGGCAGATCGGTGTGTCTGATTATGGGTTGGTTCTTCTTCCCCCTCTAGTGTATCAAGACAGGCTTCCCTaGTACAGTAAAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: RQIGVSDYGLVLLPPLVYQDRLP*YSKKGH
Trigger: ATGACCCTTTTTACTGTACAAGGGAAGCCTGTCTTG...ATACACTAGAGGGGGAAGAAGAACCAACCCATAATCAGACACACCGATCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCGGGCCCAGTATGAGCTaGCAGAGTGGAGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPGPSMS*QSGGCW
Trigger: CCAACAGCCTCCACTCTGCAAGCTCATACTGGGCCC...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGCACCGGTGTGATTGGCGATACAGTTGGCCTTCTTTTCATACAACTCATCCAGTTGTCATACACCAAGTaGCCAATCACCATGACCATC +
Preference number: 5 (lower is better)
Translates to: CTGVIGDTVGLLFIQLIQLSYTK*PITMTI
Trigger: GATGGTCATGGTGATTGGCAACTTGGTGTATGACAA...CTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp ATTCCAAGCTGTTTCCCTAGGAGGGTAGAAGACGTGGGGGAAGAGAAGCAATGGGTGCCCGGCTGTATTTaGCTTTTAAATAAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: IPSCFPRRVEDVGEEKQWVPGCI*LLNKRE
Trigger: TTCCCTTTTATTTAAAAGCAAAATACAGCCGGGCAC...CCATTGCTTCTCTTCCCCCACGTCTTCTACCCTCCTAGGGAAACAGCTTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR CAA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGAGGTGGTTTCTTGAGCTaGCTCTCAGCAATGCGCCTC +
Preference number: 5 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRGGFLS*LSAMRL
Trigger: GAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACC...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CAA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATAGGTGGTTTCTTGAGCTaGCTCTCAGCAATGCGCCTC +
Preference number: 5 (lower is better)
Translates to: TQRNTNSLNLLPISKTEIGGFLS*LSAMRL
Trigger: GAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACC...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR CAA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCTGTTTGGCTTGGGCTaGCTGTCCTCATCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPLFGLG*LSSSSS
Trigger: GGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCTGTTTGGCTTGGGCTaGCTGTCCTCATCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYLFGLG*LSSSSS
Trigger: GGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACAGGTCGCTGTTTGGCTaGGGCTTGCTGTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYRSLFG*GLLSSS
Trigger: CGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCTTCCAGGTCGCTGTTaGGCTTGGGCTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSLPGRC*AWACCP
Trigger: AGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCTGAAGATGCTGCTCTaGCTGTTGTGGCGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPLKMLL*LLWRER
Trigger: CCTCTCCCGCCACAACAGCAAGAGCAGCATCTTCAG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTACTGAGATCTGGAGGTaGTTCATTTCCCCATCGTCA +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTITEIWR*FISPSS
Trigger: TGACGATGGGGAAATGAACAACCTCCAGATCTCAGT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATACAGGCCACACCCTTCTaGATACGGATCACTGAGATC +
Preference number: 5 (lower is better)
Translates to: SKLIFTFFHLISVLFPSIQATPF*IRITEI
Trigger: GATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTG...TATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACGCGTGCACCTTTAGTTaGGTCCAGGCCACACCCTTC +
Preference number: 5 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYACTFS*VQATPF
Trigger: GAAGGGTGTGGCCTGGACCAAACTAAAGGTGCACGC...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCTGCCAATGCCGCTGGTaGTGCCATTGCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSCQCRW*CHCHSS
Trigger: AGAAGAATGGCAATGGCACAACCAGCGGCATTGGCA...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTACAGTCAAGTTGGGGTaGTTGATGAAGGACATGTGG +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSTVKLG*LMKDMW
Trigger: CCACATGTCCTTCATCAACAACCCCAACTTGACTGT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGACAGTCAAGTTGGGGTaGTTGATGAAGGACATGTGG +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPETVKLG*LMKDMW
Trigger: CCACATGTCCTTCATCAACAACCCCAACTTGACTGT...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTCATCTAGTTTATCTTaGCTGCCTTCAGGATCCGAC +
Preference number: 5 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFSSSLS*LPSGSD
Trigger: GTCGGATCCTGAAGGCAGCAAAGATAAACTAGATGA...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTGACCTGGCAGCACTaGAACCGCTGGACACAACCT +
Preference number: 5 (lower is better)
Translates to: FFHLISVLFPSISFSHSVLTWQH*NRWTQP
Trigger: AGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAA...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAAC +
Preference number: 5 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFSPSSM*TWQHLN
Trigger: GTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCT...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp TTCTTCGGTCATGAAGATGTCCTGACCTCCGAACTTTTTCTTTTGTTGATTGAAAGCCCTTCCTCGATGTaGACCTGGCAGCACTTGAAC +
Preference number: 5 (lower is better)
Translates to: FFGHEDVLTSELFLLLIESPSSM*TWQHLN
Trigger: GTTCAAGTGCTGCCAGGTCAACATCGAGGAAGGGCT...TTCAATCAACAAAAGAAAAAGTTCGGAGGTCAGGACATCTTCATGACCGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAAGCCAACACCAGGCATaGGTGAAGAACTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: LRKERGIITEDAQDSSHKSQHQA*VKNLTK
Trigger: CTTCGTCAAGTTCTTCACCAATGCCTGGTGTTGGCT...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAGCCAACACCAGGCATaGGTGAAGAACTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: VKVDLHVLPSDLCIVPLHSQHQA*VKNLTK
Trigger: CTTCGTCAAGTTCTTCACCAATGCCTGGTGTTGGCT...ATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp TGCACCGGTGTGATTGGCGATACAGTTGGCCTTCTTTTCATACAACTCATCCAGCATCTGATCTCTGTATaGTTCCCCTCCATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: CTGVIGDTVGLLFIQLIQHLISV*FPSISF
Trigger: AAAGCTTATGGAGGGGAACAATACAGAGATCAGATG...CTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCATCTGATCTCTGTATaGTTCCCCTCCATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFHLISV*FPSISF
Trigger: AAAGCTTATGGAGGGGAACAATACAGAGATCAGATG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCTATCCTGCCCCAACATaGTCAAAGTTGATCTTCACG +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGYPAPT*SKLIFT
Trigger: CGTGAAGATCAACTTTGACAATGTTGGGGCAGGATA...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATTATCCTGCCCCAACATaGTCAAAGTTGATCTTCACG +
Preference number: 5 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNYPAPT*SKLIFT
Trigger: CGTGAAGATCAACTTTGACAATGTTGGGGCAGGATA...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTTTTGAAGGTTGCTACTaGAAGAAGGGCCAGGTATCC +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIFEGCY*KKGQVS
Trigger: GGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAA...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATTTGAAGGTTGCTACTaGAAGAAGGGCCAGGTATCC +
Preference number: 5 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTFEGCY*KKGQVS
Trigger: GGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACACTCAACGCAAACATTTaGAGCACACACTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTLNANI*STHSQV
Trigger: CACCTGTGAGTGTGTGCTCAAAATGTTTGCGTTGAG...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTATCCCTTTGGCGCCTTaGATCAGACGCAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFIPLAP*IRRKMR
Trigger: GCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGAT...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCATCCCTTTGGCGCCTTaGATCAGACGCAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFIPLAP*IRRKMR
Trigger: GCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGAT...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAGCAGAAGGCCGATGTaGAACAGGGCAGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSSRRPM*NRAGKD
Trigger: GTCCTTGCCTGCCCTGTTCAACATCGGCCTTCTGCT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTTCAATGGTATTGGGCTaGGGCACTCGGAGAGGATGC +
Preference number: 5 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFSMVLG*GTRRGC
Trigger: GCATCCTCTCCGAGTGCCCAAGCCCAATACCATTGA...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCAATAGTACAAGCCATTaGGGATCAAAGTCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFNSTSH*GSKSPP
Trigger: TGGGGGAGACTTTGATCCCAAATGGCTTGTACTATT...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTTTCAACTGCAGCATCTaGGCTTTGAAATCCAGTCAT +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFFNCSI*ALKSSH
Trigger: ATGACTGGATTTCAAAGCCAAGATGCTGCAGTTGAA...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGTGTCTGATTATGGGTaGGTTCTTCTTCCCCCTCTA +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIVSDYG*VLLPPL
Trigger: TAGAGGGGGAAGAAGAACCAACCCATAATCAGACAC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACAGTGTCTGATTATGGGTaGGTTCTTCTTCCCCCTCTA +
Preference number: 5 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTVSDYG*VLLPPL
Trigger: TAGAGGGGGAAGAAGAACCAACCCATAATCAGACAC...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTGATAGAAAGCTCTGCTaGCCGACTTACTGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTIDRKLC*PTYCGL
Trigger: CAAACCACAGTAAGTCGGCAAGCAGAGCTTTCTATC...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCTAGTGGTCCAACAAGATAGATGGCTGCGCTGCTCTTaGATTGGCTTCGTTAATATT +
Preference number: 5 (lower is better)
Translates to: CRSRLKRAGQFLVVQQDRWLRCS*IGFVNI
Trigger: AATATTAACGAAGCCAATCAAAGAGCAGCGCAGCCA...TCTATCTTGTTGGACCACTAGAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AAGAGAAGCAATGGTAGTTCCAAACCGGTTCAGACTTGGTCATTGGTGGTGGCTCTAGCCTCGATCTATTaGTGTTCTTCCTTACACTGT +
Preference number: 5 (lower is better)
Translates to: KRSNGSSKPVQTWSLVVALASIY*CSSLHC
Trigger: ACAGTGTAAGGAAGAACACAAATAGATCGAGGCTAG...AGCCACCACCAATGACCAAGTCTGAACCGGTTTGGAACTACCATTGCTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS-3UTR CAA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTTCAGGGGTGAAAGGCTaGAAACTATCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFSGVKG*KLSGPG
Trigger: ACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGA...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATAGGTCGCTGTTTGGCTaGGGCTTGCTGTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNRSLFG*GLLSSS
Trigger: CGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGAGGCCACACAACACACTaGTTTCGAAGGTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRGHTTH*FRRFPM
Trigger: CATGGGGAACCTTCGAAACAAGTGTGTTGTGTGGCC...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CAA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATAGGCCACACAACACACTaGTTTCGAAGGTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: TQRNTNSLNLLPISKTEIGHTTH*FRRFPM
Trigger: CATGGGGAACCTTCGAAACAAGTGTGTTGTGTGGCC...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCAGATGAGGAAAGTGTaGGCAAATTTATACCAGCAT +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFQMRKV*ANLYQH
Trigger: ATGCTGGTATAAATTTGCCAACACTTTCCTCATCTG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTCTGTGGCAGCCAGGTaGTCTGCACTGAAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNSVAAR*SALKEL
Trigger: GAGCTCCTTCAGTGCAGACAACCTGGCTGCCACAGA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAACTGAGATCTGGAGGTaGTTCATTTCCCCATCGTCA +
Preference number: 5 (lower is better)
Translates to: LRKERGIITEDAQDSSHKTEIWR*FISPSS
Trigger: TGACGATGGGGAAATGAACAACCTCCAGATCTCAGT...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATACTGAGATCTGGAGGTaGTTCATTTCCCCATCGTCA +
Preference number: 5 (lower is better)
Translates to: VKVDLHVLPSDLCIVPLHTEIWR*FISPSS
Trigger: TGACGATGGGGAAATGAACAACCTCCAGATCTCAGT...ATGGAGGGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCAGGCCACACCCTTCTaGATACGGATCACTGAGATC +
Preference number: 5 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPQATPF*IRITEI
Trigger: GATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTG...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTCCGCTGGTTGTGCCATaGCCATTCTTCTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SSIYGTISASLSPIILCPPLVVP*PFFWKS
Trigger: TGACTTCCAGAAGAATGGCAATGGCACAACCAGCGG...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTCCGCTGGTTGTGCCATaGCCATTCTTCTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: FFHLISVLFPSISFSHSVPLVVP*PFFWKS
Trigger: TGACTTCCAGAAGAATGGCAATGGCACAACCAGCGG...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTTGCCAATGCCGCTGGTaGTGCCATTGCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSIYGTISASLSPIILCPCQCRW*CHCHSS
Trigger: AGAAGAATGGCAATGGCACAACCAGCGGCATTGGCA...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGCTAACATCCTCTGTGTaGAGGTTCTCAAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: LASLIFGKALPLTHSAKMLTSSV*RFSKSD
Trigger: GTCTGACTTTGAGAACCTCAACACAGAGGATGTTAG...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTCATCTAGTTTATCTTaGCTGCCTTCAGGATCCGAC +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPESSSLS*LPSGSD
Trigger: GTCGGATCCTGAAGGCAGCAAAGATAAACTAGATGA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTTGACCTGGCAGCACTaGAACCGCTGGACACAACCT +
Preference number: 5 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYLTWQH*NRWTQP
Trigger: AGGTTGTGTCCAGCGGTTCAAGTGCTGCCAGGTCAA...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCATCTGATCTCTGTATaGTTCCCCTCCATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQHLISV*FPSISF
Trigger: AAAGCTTATGGAGGGGAACAATACAGAGATCAGATG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TGCACCGGTGTGATTGGCGATACAGTTGGCCTTCTTTTCATACAACTCATCCAGCCAACATTGTCAAAGTaGATCTTCACGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: CTGVIGDTVGLLFIQLIQPTLSK*IFTFFH
Trigger: ATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG...CTGGATGAGTTGTATGAAAAGAAGGCCAACTGTATCGCCAATCACACCGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTATCCTGCCCCAACATaGTCAAAGTTGATCTTCACG +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPEYPAPT*SKLIFT
Trigger: CGTGAAGATCAACTTTGACAATGTTGGGGCAGGATA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACTCAACGCAAACATTTaGAGCACACACTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: LRKERGIITEDAQDSSHKLNANI*STHSQV
Trigger: CACCTGTGAGTGTGTGCTCAAAATGTTTGCGTTGAG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACATCCCTTTGGCGCCTTaGATCAGACGCAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYIPLAP*IRRKMR
Trigger: GCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGAT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCAGGGTACGAATCCCTTaGGCGCCTTTGATCAGACGC +
Preference number: 5 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPRVRIP*APLIRR
Trigger: GCGTCTGATCAAAGGCGCCAAAGGGATTCGTACCCT...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGACACTTTGGAAGGATaGGATGCCACGAACCGCTCT +
Preference number: 5 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFDTLEG*DATNRS
Trigger: AGAGCGGTTCGTGGCATCCAATCCTTCCAAAGTGTC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTTAGAAGTTGTCTTTTaGCAGATGAAGCCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSLEVVF*QMKPRL
Trigger: AAGGCGGGGCTTCATCTGCAAAAAGACAACTTCTAA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGTTAGAAGTTGTCTTTTaGCAGATGAAGCCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPELEVVF*QMKPRL
Trigger: AAGGCGGGGCTTCATCTGCAAAAAGACAACTTCTAA...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTTAGAGTCTCCACATTAGAAGTTGTCTTTTaGCAGATGAAGCCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: LRGKQTTFGIDLQVRVSTLEVVF*QMKPRL
Trigger: AAGGCGGGGCTTCATCTGCAAAAAGACAACTTCTAA...TGTGGAGACTCTAACCTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GGTGTACTTGGCGGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACACACAGCTGTTCTGCATaGATAATATTCAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: GVLGGILQLCCPSQDLRTHSCSA*IIFRKF
Trigger: AAACTTCCTGAATATTATCAATGCAGAACAGCTGTG...TGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCCGCCAAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTAATAGTACAAGCCATTaGGGATCAAAGTCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSNSTSH*GSKSPP
Trigger: TGGGGGAGACTTTGATCCCAAATGGCTTGTACTATT...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTCCCGACTTACTGTGGTTaGTTCTATGCAAAACTAGTC +
Preference number: 5 (lower is better)
Translates to: KNSTDAAAEAGLRELDSFPTYCG*FYAKLV
Trigger: GACTAGTTTTGCATAGAACAAACCACAGTAAGTCGG...GAAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTATGTCAGCTTCTGTTTaGTGCTGTTTACAATGTAGC +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFMSASV*CCLQCS
Trigger: GCTACATTGTAAACAGCACAAAACAGAAGCTGACAT...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCACTCTGTTGCAAAACTaGGGCCCCTCCCAACCCAGA +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSTLLQN*GPSQPR
Trigger: TCTGGGTTGGGAGGGGCCCAAGTTTTGCAACAGAGT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATGGTGGTTTCTTGAGCTaGCTCTCAGCAATGCGCCTC +
Preference number: 5 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNGGFLS*LSAMRL
Trigger: GAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACC...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGATTAGTAGTGTCCTGTGGTGTATGGATCTCATGCATGACTTCTGATCACGGCCAGATGAGGAAAGTGTaGGCAAATTTATACCAGCAT +
Preference number: 5 (lower is better)
Translates to: RLVVSCGVWISCMTSDHGQMRKV*ANLYQH
Trigger: ATGCTGGTATAAATTTGCCAACACTTTCCTCATCTG...GCCGTGATCAGAAGTCATGCATGAGATCCATACACCACAGGACACTACTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGCAGATGAGGAAAGTGTaGGCAAATTTATACCAGCAT +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQQMRKV*ANLYQH
Trigger: ATGCTGGTATAAATTTGCCAACACTTTCCTCATCTG...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTACTGAGATCTGGAGGTaGTTCATTTCCCCATCGTCA +
Preference number: 5 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSTEIWR*FISPSS
Trigger: TGACGATGGGGAAATGAACAACCTCCAGATCTCAGT...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGACTGAGATCTGGAGGTaGTTCATTTCCCCATCGTCA +
Preference number: 5 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLTEIWR*FISPSS
Trigger: TGACGATGGGGAAATGAACAACCTCCAGATCTCAGT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCAGGCCACACCCTTCTaGATACGGATCACTGAGATC +
Preference number: 5 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYQATPF*IRITEI
Trigger: GATCTCAGTGATCCGTATCAAGAAGGGTGTGGCCTG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCCGCTGGTTGTGCCATaGCCATTCTTCTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPPLVVP*PFFWKS
Trigger: TGACTTCCAGAAGAATGGCAATGGCACAACCAGCGG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTTCTTCTACTTCTGGTTaGATATCAATGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFSSTSG*ISMVLP
Trigger: AGGAAGCACCATTGATATCAAACCAGAAGTAGAAGA...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATAGGATCCACCAAGACTaGCCTAGCCCTTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNRIHQD*PSPSSM
Trigger: CATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCAGGATCCACCAAGACTaGCCTAGCCCTTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSRIHQD*PSPSSM
Trigger: CATCGAGGAAGGGCTAGGCAAGTCTTGGTGGATCCT...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp TTCTTCGGTCATGAAGATGTCCTGACCTCCGAACTTTTTCTTTTGTTGATTGAAAGCCAACACCAGGCATaGGTGAAGAACTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: FFGHEDVLTSELFLLLIESQHQA*VKNLTK
Trigger: CTTCGTCAAGTTCTTCACCAATGCCTGGTGTTGGCT...TTCAATCAACAAAAGAAAAAGTTCGGAGGTCAGGACATCTTCATGACCGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATTCAATGGTATTGGGCTaGGGCACTCGGAGAGGATGC +
Preference number: 5 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNSMVLG*GTRRGC
Trigger: GCATCCTCTCCGAGTGCCCAAGCCCAATACCATTGA...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCATGAGCTCAATGGTATaGGGCTTGGGCACTCGGAGA +
Preference number: 5 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPMSSMV*GLGTRR
Trigger: TCTCCGAGTGCCCAAGCCCAATACCATTGAGCTCAT...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAATTAGAAGTTGTCTTTTaGCAGATGAAGCCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: LRKERGIITEDAQDSSHKLEVVF*QMKPRL
Trigger: AAGGCGGGGCTTCATCTGCAAAAAGACAACTTCTAA...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GTTTGGAATCGGCCTGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTGTTTTCACAGCTGTTCTGCATaGATAATATTCAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: VWNRPEQVLLSLKKPDCFHSCSA*IIFRKF
Trigger: AAACTTCCTGAATATTATCAATGCAGAACAGCTGTG...AAAACAATCAGGTTTCTTCAGGCTGAGGAGGACTTGCTCAGGCCGATTCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CAAAAATTCTACGGATGCTGCTGCAGAAGCAGGCTTAAGAGAGCTGGACAGTTTAATCATTTCTACGCATaGAACGAGCACAATGTTTGG +
Preference number: 5 (lower is better)
Translates to: QKFYGCCCRSRLKRAGQFNHFYA*NEHNVW
Trigger: CCAAACATTGTGCTCGTTCAATGCGTAGAAATGATT...AAACTGTCCAGCTCTCTTAAGCCTGCTTCTGCAGCAGCATCCGTAGAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CCACGTGAAGCCCATGTGGAGAAGATGCGCTTTATGTCAAAGAAACTGACAATTAACGGATCCATCTGCTaGTTGGATTGGGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: PREAHVEKMRFMSKKLTINGSIC*LDWVCF
Trigger: AAAACAAACCCAATCCAACAAGCAGATGGATCCGTT...AATTGTCAGTTTCTTTGACATAAAGCGCATCTTCTCCACATGGGCTTCACGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CAAGATGCAGCTGTGTTACGTGGTAAGCAGACGACGTTTGGTATAGATCTTCAGGTCTCTTTTCACTCTTaGTATAGAGACTTCCTGACA +
Preference number: 5 (lower is better)
Translates to: QDAAVLRGKQTTFGIDLQVSFHS*YRDFLT
Trigger: TGTCAGGAAGTCTCTATACAAAGAGTGAAAAGAGAC...CTGAAGATCTATACCAAACGTCGTCTGCTTACCACGTAACACAGCTGCATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTCAGAGGCGGCTCCATCTCTACCTCAGGTCTCACCAGTGACTATTATTCTAATGTCTCTTTTCACTCTTaGTATAGAGACTTCCTGACA +
Preference number: 5 (lower is better)
Translates to: FRGGSISTSGLTSDYYSNVSFHS*YRDFLT
Trigger: TGTCAGGAAGTCTCTATACAAAGAGTGAAAAGAGAC...ATTAGAATAATAGTCACTGGTGAGACCTGAGGTAGAGATGGAGCCGCCTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACTCTGTTGCAAAACTaGGGCCCCTCCCAACCCAGA +
Preference number: 5 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNTLLQN*GPSQPR
Trigger: TCTGGGTTGGGAGGGGCCCAAGTTTTGCAACAGAGT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTCTCTTTAACTTCTCCTaGCCTGGCTCTGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLLFNFS*PGSAGT
Trigger: TGTGCCAGCAGAGCCAGGCAAGGAGAAGTTAAAGAG...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS TCA 90 bp TACCTTAGGGTTTCTGGGCCAAGAAAGAATAAAAATCAACAAACATaGCGGGTAGTAGAAGGACTAAGCAGTAGAAGGACTTGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: YLRVSGPRKNKNQQT*RVVEGLSSRRTWAS
Trigger: AGAAGCCCAAGTCCTTCTACTGCTTAGTCCTTCTACTACCCGTCATGTTTGTTGATTTTTATTCTTTCTTGGCCCAGAAACCCTAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550891.4
CDS TCA 90 bp AAACAGGTTCAGCACTTTTTAGGAGTGGGAGAGGTGCTCACTTCTTaGTTTACACTTGGTCCTTACTTTGTCATACACCAAGTTGCCAAT +
Preference number: 5 (lower is better)
Translates to: KQVQHFLGVGEVLTS*FTLGPYFVIHQVAN
Trigger: ATTGGCAACTTGGTGTATGACAAAGTAAGGACCAAGTGTAAATCAAGAAGTGAGCACCTCTCCCACTCCTAAAAAGTGCTGAACCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp CCAACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCACAGTCAAGTTGGGGTaGTTGATGAAGGACATGTGG +
Preference number: 5 (lower is better)
Translates to: PTLSKLIFTFFHLISVLFTVKLG*LMKDMW
Trigger: CCACATGTCCTTCATCAACAACCCCAACTTGACTGT...GAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp GTTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTCTAACATCCTCTGTGTaGAGGTTCTCAAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: VLPSDLCIVPLHKLFTFSLTSSV*RFSKSD
Trigger: GTCTGACTTTGAGAACCTCAACACAGAGGATGTTAG...ACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTCATCTAGTTTATCTTaGCTGCCTTCAGGATCCGAC +
Preference number: 5 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLSSSLS*LPSGSD
Trigger: GTCGGATCCTGAAGGCAGCAAAGATAAACTAGATGA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GCATTGACTGATGTGGAACATGCAGTAACCACCTGCCCAAGCATTAGAAAATCTTCTTCTACTTCTGGTTaGATATCAATGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: ALTDVEHAVTTCPSIRKSSSTSG*ISMVLP
Trigger: AGGAAGCACCATTGATATCAAACCAGAAGTAGAAGA...AGATTTTCTAATGCTTGGGCAGGTGGTTACTGCATGTTCCACATCAGTCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCCTGAGCCAACATTGTCAAAGTaGATCTTCACGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: HANHFYALNEHNVWNRPEPTLSK*IFTFFH
Trigger: ATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG...CTCAGGCCGATTCCAAACATTGTGCTCGTTCAATGCGTAGAAATGATTTGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTTGAAGGTTGCTACTaGAAGAAGGGCCAGGTATCC +
Preference number: 5 (lower is better)
Translates to: FFHLISVLFPSISFSHSVFEGCY*KKGQVS
Trigger: GGATACCTGGCCCTTCTTCAAGTAGCAACCTTCAAA...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp TTCTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTCTCAACGCAAACATTTaGAGCACACACTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: FFHLISVLFPSISFSHSVLNANI*STHSQV
Trigger: CACCTGTGAGTGTGTGCTCAAAATGTTTGCGTTGAG...AACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTGTGTCTGATTATGGGTaGGTTCTTCTTCCCCCTCTA +
Preference number: 5 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFVSDYG*VLLPPL
Trigger: TAGAGGGGGAAGAAGAACCAACCCATAATCAGACAC...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAACTTCCCAGTCTGGTATaGGGTGTAGTACAAAAATTC +
Preference number: 5 (lower is better)
Translates to: LRKERGIITEDAQDSSHKLPSLV*GVVQKF
Trigger: GAATTTTTGTACTACACCCAATACCAGACTGGGAAG...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTGGCTGCGCTGCTCTTaGATTGGCTTCGTTAATATT +
Preference number: 5 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLWLRCS*IGFVNI
Trigger: AATATTAACGAAGCCAATCAAAGAGCAGCGCAGCCA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTGTCGCTTTAGGGGCTTaGACTGGGAGTTTGTTTATC +
Preference number: 5 (lower is better)
Translates to: SSIYGTISASLSPIILCPVALGA*TGSLFI
Trigger: GATAAACAAACTCCCAGTCAAAGCCCCTAAAGCGAC...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTGGCTTCGTTAATATTTGGCAAAGCATTGCCACTTACCCACTCAGCGAAGATGAATGAACGAAGCTTTTaGCTAAACTGTGGGCAACAT +
Preference number: 5 (lower is better)
Translates to: LASLIFGKALPLTHSAKMNERSF*LNCGQH
Trigger: ATGTTGCCCACAGTTTAGCAAAAAGCTTCGTTCATT...CATCTTCGCTGAGTGGGTAAGTGGCAATGCTTTGCCAAATATTAACGAAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACACAATGGAAACTCTGTaGCAAAACTTGGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYTMETL*QNLGPS
Trigger: GGAGGGGCCCAAGTTTTGCAACAGAGTTTCCATTGT...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGAAGTCCAATAATACTTaGCCCTTCCCTAGCGCCTTT +
Preference number: 5 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLKSNNT*PFPSAF
Trigger: AAAGGCGCTAGGGAAGGGCAAAGTATTATTGGACTT...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCGTCAAGTTGGGGTTGTaGATGAAGGACATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSVKLGL*MKDMWS
Trigger: GGACCACATGTCCTTCATCAACAACCCCAACTTGAC...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCTAACATCCTCTGTGTaGAGGTTCTCAAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPLTSSV*RFSKSD
Trigger: GTCTGACTTTGAGAACCTCAACACAGAGGATGTTAG...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp TTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATAGCCAACACCAGGCATaGGTGAAGAACTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: LRTQRIVAGMELLPFSPNSQHQA*VKNLTK
Trigger: CTTCGTCAAGTTCTTCACCAATGCCTGGTGTTGGCT...ATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTTATCCTGCCCCAACATaGTCAAAGTTGATCTTCACG +
Preference number: 5 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFYPAPT*SKLIFT
Trigger: CGTGAAGATCAACTTTGACAATGTTGGGGCAGGATA...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCTCAACGCAAACATTTaGAGCACACACTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSLNANI*STHSQV
Trigger: CACCTGTGAGTGTGTGCTCAAAATGTTTGCGTTGAG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp AGCAGCATTTATGGTACCATTTCAGCTTCCTTAAGTCCAATAATACTTTGCCCTAATAGTACAAGCCATTaGGGATCAAAGTCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: SSIYGTISASLSPIILCPNSTSH*GSKSPP
Trigger: TGGGGGAGACTTTGATCCCAAATGGCTTGTACTATT...AGGGCAAAGTATTATTGGACTTAAGGAAGCTGAAATGGTACCATAAATGCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp CTGAGAAAAGAAAGAGGCATCATTACAGAAGATGCCCAGGACTCAAGTCACAAAAATGAACGAAGCTTTTaGCTAAACTGTGGGCAACAT +
Preference number: 5 (lower is better)
Translates to: LRKERGIITEDAQDSSHKNERSF*LNCGQH
Trigger: ATGTTGCCCACAGTTTAGCAAAAAGCTTCGTTCATT...TTTGTGACTTGAGTCCTGGGCATCTTCTGTAATGATGCCTCTTTCTTTTCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTAAGTCCAATAATACTTaGCCCTTCCCTAGCGCCTTT +
Preference number: 5 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFKSNNT*PFPSAF
Trigger: AAAGGCGCTAGGGAAGGGCAAAGTATTATTGGACTT...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAAATACCTAACATCCTCTGTGTaGAGGTTCTCAAAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: KNSKNCSRYGTLTIFSKYLTSSV*RFSKSD
Trigger: GTCTGACTTTGAGAACCTCAACACAGAGGATGTTAG...GTATTTGGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp CTATGCAAAACTAGTCTGGTGGACTGTGAAATTACCTTCAAAGTGCTTCTACTGTCTTCTACTTCTGGTTaGATATCAATGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LCKTSLVDCEITFKVLLLSSTSG*ISMVLP
Trigger: AGGAAGCACCATTGATATCAAACCAGAAGTAGAAGA...CAGTAGAAGCACTTTGAAGGTAATTTCACAGTCCACCAGACTAGTTTTGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ACCCAAAGGAACACAAATTCTCTGAACCTTCTCCCCATCTCAAAAACAGAAATAAAGCACATCTCATTCTaGCAGAGGAGACTTAGAACA +
Preference number: 5 (lower is better)
Translates to: TQRNTNSLNLLPISKTEIKHISF*QRRLRT
Trigger: TGTTCTAAGTCTCCTCTGCAAGAATGAGATGTGCTT...TATTTCTGTTTTTGAGATGGGGAGAAGGTTCAGAGAATTTGTGTTCCTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS-3UTR CAA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTCAGATGAGGAAAGTGTaGGCAAATTTATACCAGCAT +
Preference number: 5 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFQMRKV*ANLYQH
Trigger: ATGCTGGTATAAATTTGCCAACACTTTCCTCATCTG...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCTCATCTAGTTTATCTTaGCTGCCTTCAGGATCCGAC +
Preference number: 5 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSSSSLS*LPSGSD
Trigger: GTCGGATCCTGAAGGCAGCAAAGATAAACTAGATGA...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp CTTCCATCTGATCTCTGTATTGTTCCCCTCCATAAGCTTTTCACATTCAGTTTTTCTTCTACTTCTGGTTaGATATCAATGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LPSDLCIVPLHKLFTFSFSSTSG*ISMVLP
Trigger: AGGAAGCACCATTGATATCAAACCAGAAGTAGAAGA...AAAACTGAATGTGAAAAGCTTATGGAGGGGAACAATACAGAGATCAGATGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp AACATTGTCAAAGTTGATCTTCACGTTCTTCCATCTGATCTCTGTATTGTTCCCCCAACATTGTCAAAGTaGATCTTCACGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: NIVKVDLHVLPSDLCIVPPTLSK*IFTFFH
Trigger: ATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG...GGGAACAATACAGAGATCAGATGGAAGAACGTGAAGATCAACTTTGACAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp GGGATCTTACAGCTCTGTTGCCCATCTCAAGACCTAAGAACAATTATTAAGTTTCCAACATTGTCAAAGTaGATCTTCACGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: GILQLCCPSQDLRTIIKFPTLSK*IFTFFH
Trigger: ATGGAAGAACGTGAAGATCAACTTTGACAATGTTGG...AAACTTAATAATTGTTCTTAGGTCTTGAGATGGGCAACAGAGCTGTAAGATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCTTCAACTGCAGCATCTaGGCTTTGAAATCCAGTCAT +
Preference number: 5 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPFNCSI*ALKSSH
Trigger: ATGACTGGATTTCAAAGCCAAGATGCTGCAGTTGAA...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCCCGACTTACTGTGGTTaGTTCTATGCAAAACTAGTC +
Preference number: 5 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPPTYCG*FYAKLV
Trigger: GACTAGTTTTGCATAGAACAAACCACAGTAAGTCGG...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCACTTGGTCCTTACTTaGTCATACACCAAGTTGCCA +
Preference number: 5 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSHLVLT*SYTKLP
Trigger: TGGCAACTTGGTGTATGACAAAGTAAGGACCAAGTG...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp TTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCGCAAACAAGTTAACTCCCTTCTTGATTTACACTaGGTCCTTACTTTGTCATAC +
Preference number: 5 (lower is better)
Translates to: FRSLIKAVVVLSRKQVNSLLDLH*VLTLSY
Trigger: GTATGACAAAGTAAGGACCAAGTGTAAATCAAGAAG...GGAGTTAACTTGTTTGCGGGAAAGTACCACTACTGCTTTAATGAGACTTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS-3UTR CAA 90 bp ATTTGGTTTTACAGTGACATAAATAGTACAAGCCATTTGGGATCAAAGTCTCCCAATCATTTCTACGCATaGAACGAGCACAATGTTTGG +
Preference number: 5 (lower is better)
Translates to: IWFYSDINSTSHLGSKSPNHFYA*NEHNVW
Trigger: CCAAACATTGTGCTCGTTCAATGCGTAGAAATGATT...GGGAGACTTTGATCCCAAATGGCTTGTACTATTTATGTCACTGTAAAACCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCAATCATTTCTACGCATaGAACGAGCACAATGTTTGG +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSNHFYA*NEHNVW
Trigger: CCAAACATTGTGCTCGTTCAATGCGTAGAAATGATT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCGTCTCTTTTCACTCTTaGTATAGAGACTTCCTGACA +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSVSFHS*YRDFLT
Trigger: TGTCAGGAAGTCTCTATACAAAGAGTGAAAAGAGAC...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCATGTCAGCTTCTGTTTaGTGCTGTTTACAATGTAGC +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSMSASV*CCLQCS
Trigger: GCTACATTGTAAACAGCACAAAACAGAAGCTGACAT...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
CDS-3UTR CAA 90 bp AGATGTCTACTGGTTCTTATTCTAGTGAGACAGACAGCAGTAGAACATGATAGACTGCATAAGCTTTCATaGGGATTTATGTCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: RCLLVLILVRQTAVEHDRLHKLS*GFMSEN
Trigger: ATTCTCAGACATAAATCCCAATGAAAGCTTATGCAG...TCTATCATGTTCTACTGCTGTCTGTCTCACTAGAATAAGAACCAGTAGACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS-3UTR CAA 90 bp TTCAATTTCAAATCGGATTTCAGAAGTCTCATTAAAGCAGTAGTGGTACTTTCCCAGATGAGGAAAGTGTaGGCAAATTTATACCAGCAT +
Preference number: 5 (lower is better)
Translates to: FNFKSDFRSLIKAVVVLSQMRKV*ANLYQH
Trigger: ATGCTGGTATAAATTTGCCAACACTTTCCTCATCTG...GGAAAGTACCACTACTGCTTTAATGAGACTTCTGAAATCCGATTTGAAATTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548086.3
ENST00000636945.2
CDS-3UTR CAA 90 bp ACTTTTAAGAACTCAAAGAATTGTAGCCGGTATGGAACTCTTACCATTTTCTCCCACAGCTGTTCTGCATaGATAATATTCAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: TFKNSKNCSRYGTLTIFSHSCSA*IIFRKF
Trigger: AAACTTCCTGAATATTATCAATGCAGAACAGCTGTG...GGAGAAAATGGTAAGAGTTCCATACCGGCTACAATTCTTTGAGTTCTTAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS-3UTR CAA 90 bp ATTTCAATTTCAATCCCTTTTAAAAGTCTGGGTCCAGTTTCCTATTGGCCTCTTACCAGAGGATTATTATaGTTCTTACTGTTGCTGATC +
Preference number: 5 (lower is better)
Translates to: ISISIPFKSLGPVSYWPLTRGLL*FLLLLI
Trigger: GATCAGCAACAGTAAGAACAATAATAATCCTCTGGT...AAGAGGCCAATAGGAAACTGGACCCAGACTTTTAAAAGGGATTGAAATTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667214.1
CDS GCA 72 bp CCGGGAGGCGCGGCCGGACTGCAAAGGCGCCGAGGATaGGGCGGGCGGGACTGCGGTGGGCGCCATCTTGGA +
Preference number: 6 (lower is better)
Translates to: PGGAAGLQRRRG*GGRDCGGRHLG
Trigger: TCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTGCAGTCCGGCCGCGCCTCCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000627620.5
ENST00000637709.2
ENST00000668547.1
CDS GCA 72 bp GGACTGCAAAGGCGCCGAGGATGCGGCGGGCGGGACTaGGGTGGGCGCCATCTTGGAGCGCTCCCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: GLQRRRGCGGRD*GGRHLGALPAP
Trigger: GGGCGCGGGGAGCGCTCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTGCAGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637709.2
CDS CAA 90 bp CCGCCGATGTGGGAGCCGGGGCCGCCGATGAGGGACACCACGCCGTaGCAGTCCACCGTGCTGTTGCGCTTCACGCTGCGCCGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: PPMWEPGPPMRDTTP*QSTVLLRFTLRRRL
Trigger: CAGCCTGCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTGCAACGGCGTGGTGTCCCTCATCGGCGGCCCCGGCTCCCACATCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000551216.2
ENST00000599343.5
ENST00000627620.5
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS GCA 72 bp CGCCGTTGCAGTCCACCGTGCTGTTGCGCTTCACGCTaGGCCGCAGGCTGGGGAAGATGCGCGAGGAGCGGC +
Preference number: 6 (lower is better)
Translates to: RRCSPPCCCASR*AAGWGRCARSG
Trigger: GCCGCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACAGCACGGTGGACTGCAACGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000551216.2
ENST00000599343.5
ENST00000627620.5
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS CCA 72 bp CCACCGTGCTGTTGCGCTTCACGCTGCGCCGCAGGCTaGGGAAGATGCGCGAGGAGCGGCTGCCCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: PPCCCASRCAAG*GRCARSGCPGC
Trigger: ACAGCCAGGGCAGCCGCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCGTGAAGCGCAACAGCACGGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000551216.2
ENST00000599343.5
ENST00000627620.5
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS GCA 72 bp GGCAGGTGGAGGCTCGTGTTTCAGCCCACAGGGACCTaGTGCCAGGAGCGGGGAGGCGCTGCCTCCCTGACA +
Preference number: 6 (lower is better)
Translates to: GRWRLVFQPTGT*CQERGGAASLT
Trigger: TGTCAGGGAGGCAGCGCCTCCCCGCTCCTGGCAGCAGGTCCCTGTGGGCTGAAACACGAGCCTCCACCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546961.1
CDS CAA 90 bp GGGTCTCGGAACCGCCCAGGTCCCCTGAAACTGAAGATGCTGCTCTaGCTGTTGTGGCGGGAGAGGAAGGGCGAGCCTGGGATGCTGAGC +
Preference number: 6 (lower is better)
Translates to: GSRNRPGPLKLKMLL*LLWRERKGEPGMLS
Trigger: GCTCAGCATCCCAGGCTCGCCCTTCCTCTCCCGCCACAACAGCAAGAGCAGCATCTTCAGTTTCAGGGGACCTGGGCGGTTCCGAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000551216.2
ENST00000599343.5
ENST00000627620.5
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS GCA 72 bp TGCCAAATGTCCCCGGTAGGCACGCTGCAGGACCACTaGAGATACCTCCTCCTGCTTGCGACGCAGTGTGGT +
Preference number: 6 (lower is better)
Translates to: CQMSPVGTLQDH*RYLLLLATQCG
Trigger: ACCACACTGCGTCGCAAGCAGGAGGAGGTATCTGCAGTGGTCCTGCAGCGTGCCTACCGGGGACATTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000599343.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS CAA 90 bp GCAATGCGCCTCTCAATGTTTGCCAGTGACTCAGGGGTGAAAGGCTaGAAACTATCAGGGCCTGGTGGTGCAAGCAGCCGCGCTGCCATC +
Preference number: 6 (lower is better)
Translates to: AMRLSMFASDSGVKG*KLSGPGGASSRAAI
Trigger: GATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000550891.4
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS GCA 72 bp GGTGGTGCAAGCAGCCGCGCTGCCATCTTCTCATCCTaGAGCAGCTTCGTTAGTTATGCTGCGTCCAGGACA +
Preference number: 6 (lower is better)
Translates to: GGASSRAAIFSS*SSFVSYAASRT
Trigger: TGTCCTGGACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000550891.4
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS GCA 72 bp AGGGGTGAAAGGCTTGAAACTATCAGGGCCTGGTGGTaGAAGCAGCCGCGCTGCCATCTTCTCATCCTGCAG +
Preference number: 6 (lower is better)
Translates to: RGERLETIRAWW*KQPRCHLLILQ
Trigger: CTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354534.11
ENST00000545061.5
ENST00000550891.4
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS CCA 72 bp GTCCTCATCGTCCTCCCGATGACTGCCATCGGCCTTTaGTGGTTTCTTGAGCTTGCTCTCAGCAATGCGCCT +
Preference number: 6 (lower is better)
Translates to: VLIVLPMTAIGL*WFLELALSNAP
Trigger: AGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000599343.5
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS GCA 72 bp CGCTCACTCCACCCTCGCGAGGATCTAGGTAATGAGTaGCAGAGCTCTTGGCACTTTACTGTGTCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: RSLHPREDLGNE*QSSWHFTVSLL
Trigger: GAGGAGAGACACAGTAAAGTGCCAAGAGCTCTGGCACTCATTACCTAGATCCTCGCGAGGGTGGAGTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546961.1
CDS CAA 72 bp CTCTCAATGTTTGCCAGTGACTCAGGGGTGAAAGGCTaGAAACTATCAGGGCCTGGTGGTGCAAGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: LSMFASDSGVKG*KLSGPGGASSR
Trigger: GCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000599343.5
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS TCA 72 bp CCTCCCGATGACTGCCATCGGCCTTTGGTGGTTTCTTaGGCTTGCTCTCAGCAATGCGCCTCTCAATGTTTG +
Preference number: 6 (lower is better)
Translates to: PPDDCHRPLVVS*ACSQQCASQCL
Trigger: CAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000550891.4
ENST00000599343.5
ENST00000627620.5
ENST00000637709.2
ENST00000638820.1
ENST00000662684.1
ENST00000667214.1
ENST00000668547.1
CDS CCA 72 bp GATGTCCAAGCAGTGGATGCGATCCCCGCTCACCATTaGCAGATCCATAGCGATGAGCTCAATGGTATTGGG +
Preference number: 6 (lower is better)
Translates to: DVQAVDAIPAHH*QIHSDELNGIG
Trigger: CCCAATACCATTGAGCTCATCGCTATGGATCTGCCAATGGTGAGCGGGGATCGCATCCACTGCTTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000599343.5
ENST00000627620.5
ENST00000662684.1
ENST00000668547.1
CDS TCA 72 bp GCGCAGGGAACTCAATTTACAGGATCTTGGGCCCACTaGAAAAACGAGAAGTCAATCAGCGGCAGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: AQGTQFTGSWAH*KNEKSISGRWR
Trigger: CCTCCACCTGCCGCTGATTGACTTCTCGTTTTTTCAGTGGGCCCAAGATCCTGTAAATTGAGTTCCCTGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546961.1
CDS CCA 72 bp GAAATAGAAATAGGCCAGGAAGAACACAGAAATGGCTaGGGTGTTAACAGGAGTGGGGTCCAGACAGACCAA +
Preference number: 6 (lower is better)
Translates to: EIEIGQEEHRNG*GVNRSGVQTDQ
Trigger: TTGGTCTGTCTGGACCCCACTCCTGTTAACACCCCAGCCATTTCTGTGTTCTTCCTGGCCTATTTCTATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638820.1
ENST00000667214.1
CDS CCA 72 bp CCTCGCGAGGATCTAGGTAATGAGTGCCAGAGCTCTTaGCACTTTACTGTGTCTCTCCTCTACTTAATATTT +
Preference number: 6 (lower is better)
Translates to: PREDLGNECQSS*HFTVSLLYLIF
Trigger: AAATATTAAGTAGAGGAGAGACACAGTAAAGTGCCAAGAGCTCTGGCACTCATTACCTAGATCCTCGCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546961.1
CDS CAA 90 bp GAAACAGGTTCAGCACTTTTTAGGAGTGGGAGAGGTGCTCACTTCTaGATTTACACTTGGTCCTTACTTTGTCATACACCAAGTTGCCAA +
Preference number: 6 (lower is better)
Translates to: ETGSALFRSGRGAHF*IYTWSLLCHTPSCQ
Trigger: TTGGCAACTTGGTGTATGACAAAGTAAGGACCAAGTGTAAATCAAGAAGTGAGCACCTCTCCCACTCCTAAAAAGTGCTGAACCTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS TCA 72 bp CAGCACTTTTTAGGAGTGGGAGAGGTGCTCACTTCTTaGTTTACACTTGGTCCTTACTTTGTCATACACCAA +
Preference number: 6 (lower is better)
Translates to: QHFLGVGEVLTS*FTLGPYFVIHQ
Trigger: TTGGTGTATGACAAAGTAAGGACCAAGTGTAAATCAAGAAGTGAGCACCTCTCCCACTCCTAAAAAGTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS CAA 72 bp TCAGCACTTTTTAGGAGTGGGAGAGGTGCTCACTTCTaGATTTACACTTGGTCCTTACTTTGTCATACACCA +
Preference number: 6 (lower is better)
Translates to: SALFRSGRGAHF*IYTWSLLCHTP
Trigger: TGGTGTATGACAAAGTAAGGACCAAGTGTAAATCAAGAAGTGAGCACCTCTCCCACTCCTAAAAAGTGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636945.2
CDS CAA 90 bp AATTCCAGTGAAAACCAGATTTCCTACAGCCAAGACATGTTCAAATaGTGGTGTCATAGGATGGTGCTCCATTGCCATAAACAGTGTATT +
Preference number: 6 (lower is better)
Translates to: NSSENQISYSQDMFK*WCHRMVLHCHKQCI
Trigger: AATACACTGTTTATGGCAATGGAGCACCATCCTATGACACCACAATTTGAACATGTCTTGGCTGTAGGAAATCTGGTTTTCACTGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354534.11
ENST00000355133.7
ENST00000545061.5
ENST00000548086.3
ENST00000550891.4
ENST00000599343.5
ENST00000627620.5
ENST00000636945.2
ENST00000662684.1
ENST00000668547.1
CDS TCA 72 bp GTTTCTGGGCCAAGAAAGAATAAAAATCAACAAACATaGCGGGTAGTAGAAGGACTAAGCAGTAGAAGGACT +
Preference number: 6 (lower is better)
Translates to: VSGPRKNKNQQT*RVVEGLSSRRT
Trigger: AGTCCTTCTACTGCTTAGTCCTTCTACTACCCGTCATGTTTGTTGATTTTTATTCTTTCTTGGCCCAGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550891.4