RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCN5A (Homo sapiens)

Ensembl gene IDs: ENSG00000183873

Ensembl transcript IDs: ENST00000327956.6, ENST00000333535.9, ENST00000413689.6, ENST00000414099.6, ENST00000423572.7, ENST00000449557.6, ENST00000450102.6, ENST00000455624.6, ENST00000476683.1, ENST00000491944.1

Found 1823 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGGCCTaGGAGGCATGCGCCCGGTGGAGGGGCTCCATGGGAGAGCTGGAA +
Preference number: 1 (lower is better)
Translates to: LGAASPEPAGETEVA*EACARWRGSMGELE
Trigger: TTCCAGCTCTCCCATGGAGCCCCTCCACCGGGCGCATGCCTCCCAGGCCACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR GCA 90 bp CCCCATGGCTCAGCCCTCTCTTCCGATGGCTGGCTGGGCAGGGCCTaGCAGGTTCCAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAA +
Preference number: 1 (lower is better)
Translates to: PHGSALSSDGWLGRA*QVPGARTSCMPGRE
Trigger: TTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTGGAACCTGGCAGGCCCTGCCCAGCCAGCCATCGGAAGAGAGGGCTGAGCCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 90 bp CCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATaGCTCAGCCCTCTCTTCCGATGGCTGGCTGGGCAGGGCCTGCCA +
Preference number: 1 (lower is better)
Translates to: PPWLRAGELLSPKPP*LSPLFRWLAGQGLP
Trigger: TGGCAGGCCCTGCCCAGCCAGCCATCGGAAGAGAGGGCTGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR TCA 90 bp AGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTaGGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGC +
Preference number: 1 (lower is better)
Translates to: RAAGHCLTRPGHRSI*GLQAQANCSGCPRG
Trigger: GCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR TCA 90 bp AGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGTGTaGGGACTGTGTGTGTGTGCTTGTGTGAGTGGGGGTTCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: RLGAWVPRPVSGLRV*GLCVCACVSGGSAL
Trigger: GAGGGCTGAACCCCCACTCACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR GCA 90 bp TTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTaGACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTC +
Preference number: 1 (lower is better)
Translates to: FPSKGTRTGPDHPFP*TGRRAKLRSPLPCL
Trigger: GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CCA 90 bp CGGGCTGTCCACACACACAAAAACCACAGTCTCCTTCCGGCCAGCTaGGCTGGCAGCCCGACCTGCCTCCCAACCGCATTCCTGCCTGTG +
Preference number: 1 (lower is better)
Translates to: RAVHTHKNHSLLPAS*AGSPTCLPTAFLPV
Trigger: CACAGGCAGGAATGCGGTTGGGAGGCAGGTCGGGCTGCCAGCCCAGCTGGCCGGAAGGAGACTGTGGTTTTTGTGTGTGTGGACAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CCA 90 bp AGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAGGCCCATTTCTTACTCCCAAAGCCA +
Preference number: 1 (lower is better)
Translates to: RPTAPAVHAAPQNSA*LIRGAEAHFLLPKP
Trigger: TGGCTTTGGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR CCA 90 bp GACCTATGGGACCACCTGGATCTTGCCCCAAAGAGGTCCTCTGTGTaGGTGCCATCAGGATCCCGGGCTGAGCCAGAGAGGCTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: DLWDHLDLAPKRSSV*VPSGSRAEPERLGL
Trigger: CAGGCCCAGCCTCTCTGGCTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCCCATAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR TCA 90 bp CAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCCATTTCTTACTCCCAAAGCCAGGAA +
Preference number: 1 (lower is better)
Translates to: QLLRLSTRRHRTLPG*SAGLRPISYSQSQE
Trigger: TTCCTGGCTTTGGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR CCA 90 bp GGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTaGAGAGGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGT +
Preference number: 1 (lower is better)
Translates to: GRRAKLRSPLPCLCV*RGAGDHTENSSAYG
Trigger: ACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCCTCTCCAGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTaGTTGTGTGAGTGGGGGTTCAGCCCTCCCAGCATCTCAGGTCAA +
Preference number: 1 (lower is better)
Translates to: PTACVWPPCVRTVCV*LCEWGFSPPSISGQ
Trigger: TTGACCTGAGATGCTGGGAGGGCTGAACCCCCACTCACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 90 bp GTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGAGTaGGGGTTCAGCCCTCCCAGCATCTCAGGTCAAGTGGGAGGGGGA +
Preference number: 1 (lower is better)
Translates to: VWPPCVRTVCVCLCE*GFSPPSISGQVGGG
Trigger: TCCCCCTCCCACTTGACCTGAGATGCTGGGAGGGCTGAACCCCCACTCACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 90 bp TGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTaGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGC +
Preference number: 1 (lower is better)
Translates to: WRPHRKLLRVWSREP*EIASFLSSGRLRGR
Trigger: GCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 90 bp TGTCCACACACACAAAAACCACAGTCTCCTTCCGGCCAGCTGGGCTaGCAGCCCGACCTGCCTCCCAACCGCATTCCTGCCTGTGTAGCA +
Preference number: 1 (lower is better)
Translates to: CPHTQKPQSPSGQLG*QPDLPPNRIPACVA
Trigger: TGCTACACAGGCAGGAATGCGGTTGGGAGGCAGGTCGGGCTGCCAGCCCAGCTGGCCGGAAGGAGACTGTGGTTTTTGTGTGTGTGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR TCA 90 bp CTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTaGGTGGGGGTTCAGCCCTCCCAGCATCTCAGGTCAAGTGGGAGG +
Preference number: 1 (lower is better)
Translates to: LCLASVCEDCVCVLV*VGVQPSQHLRSSGR
Trigger: CCTCCCACTTGACCTGAGATGCTGGGAGGGCTGAACCCCCACTCACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 90 bp TGTCTGGAGAGGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATaGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGC +
Preference number: 1 (lower is better)
Translates to: CLERSWRPHRKLLRV*SREPWEIASFLSSG
Trigger: GCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCCTCTCCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR TCA 90 bp GGCCTGCCAGGTTCCAGGAGCAAGGACAAGCTGCATGCCAGGCCGTaGATGGGGCTTGCACCCTTGTGTCCTTTGGTTTTGTTAATACTC +
Preference number: 1 (lower is better)
Translates to: GLPGSRSKDKLHARP*MGLAPLCPLVLLIL
Trigger: GAGTATTAACAAAACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTGGAACCTGGCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR TCA 90 bp GGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGCTCCATAGACACTCTTGTTCAGGGT +
Preference number: 1 (lower is better)
Translates to: GSEDLWEPHWIPLLL*EQTSGCSIDTLVQG
Trigger: ACCCTGAACAAGAGTGTCTATGGAGCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR GCA 90 bp TTCCAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTaGACCCTTGTGTCCTTTGGTTTTGTTAATACTCTTACAGGAGGG +
Preference number: 1 (lower is better)
Translates to: FQEQGQAACQAVNGA*TLVSFGFVNTLTGG
Trigger: CCCTCCTGTAAGAGTATTAACAAAACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 90 bp ACACAGGAGAAGAGAACTAGATCTGTCAGGGGCATGGGTTGGGTCTaGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAAT +
Preference number: 1 (lower is better)
Translates to: TQEKRTRSVRGMGWV*GCHQGNWGDKKKHN
Trigger: ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACCCATGCCCCTGACAGATCTAGTTCTCTTCTCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR TCA 90 bp AGTTTGGTGAGAAGTGCTCGATTAGTTCAGACAACATCTGGCACTTaGTGTCTGTCCTTCCCTCCTGCTGGTCATTGTGCAGTTCTGGAA +
Preference number: 1 (lower is better)
Translates to: SLVRSARLVQTTSGT*CLSFPPAGHCAVLE
Trigger: TTCCAGAACTGCACAATGACCAGCAGGAGGGAAGGACAGACATCAAGTGCCAGATGTTGTCTGAACTAATCGAGCACTTCTCACCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CCA 90 bp ATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTaGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAG +
Preference number: 1 (lower is better)
Translates to: IHNIYSLSFIFRLSS*DEVAFQSRRALPDQ
Trigger: CTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR CCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGAGACTGAGGTGGCCTaGGAGGCATGCGCCCGGTGG +
Preference number: 2 (lower is better)
Translates to: SPPTARRGRLGAASPEPAETEVA*EACARW
Trigger: CCACCGGGCGCATGCCTCCCAGGCCACCTCAGTCTC...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGGGCGCCACAGAACTCTaGCTGGTTGATCCGCGGGGC +
Preference number: 2 (lower is better)
Translates to: PTARRGRLGAASPEPAGEGATEL*LVDPRG
Trigger: GCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGAGCCCTCTCTTCCGATaGCTGGCTGGGCAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: PTARRGRLGAASPEPAGESPLFR*LAGQGL
Trigger: CAGGCCCTGCCCAGCCAGCCATCGGAAGAGAGGGCT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: RRGRLGAASPEPAGETEVRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTCTGCATGCCAGGCCGTaGATGGGGCTTGCACCCTTG +
Preference number: 2 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSLHARP*MGLAPL
Trigger: CAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAG...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: RRGRLGAASPEPAGETEVPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGCATCTCAGGTCAAGTaGGAGGGGGACCCCATTCGA +
Preference number: 2 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVASQVK*EGDPIR
Trigger: TCGAATGGGGTCCCCCTCCCACTTGACCTGAGATGC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCACCCACGGCCTGTGTCTaGCCTCCGTGTGTGAGGACT +
Preference number: 2 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPPTACV*PPCVRT
Trigger: AGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCAGCCCCAAACCCCCATaGCTCAGCCCTCTCTTCCGA +
Preference number: 2 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGSPKPP*LSPLFR
Trigger: TCGGAAGAGAGGGCTGAGCCATGGGGGTTTGGGGCT...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGGTCCAGAGAGCCCTaGGAGATCGCCAGTTTCCTC +
Preference number: 2 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLWSREP*EIASFL
Trigger: GAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCA...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCCCATTTCTTACTCCCAAAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: PTAPAVHAAPQNSAW*IRGAEAHFLLPKPG
Trigger: TCCTGGCTTTGGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR TCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: QEQGQAACQAVNGACTLVRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGCCTCAGCAGCTGGGATaGAGTTGCTTTCCAGAGCCG +
Preference number: 2 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVPQQLG*SCFPEP
Trigger: CGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGG...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAAATAGGGGGCCAGAGTaGGCCCCGTGGACAAGAACC +
Preference number: 2 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPNRGPE*APWTRT
Trigger: GGTTCTTGTCCACGGGGCTCACTCTGGCCCCCTATT...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGAGGATTGTCAGCAGCTaGAGAGGTCCTGGGGGTGAT +
Preference number: 2 (lower is better)
Translates to: PTARRGRLGAASPEPAGERIVSS*RGPGGD
Trigger: ATCACCCCCAGGACCTCTTCAGCTGCTGACAATCCT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGCGCCACAGAACTCTaGCTGGTTGATCCGCGGGGC +
Preference number: 2 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHGATEL*LVDPRG
Trigger: GCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR GCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCAAAGGCAACTATCAGTaGCTAGGGCCAGCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLKGNYQ*LGPALG
Trigger: TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTT...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGGGAGCAAGGACAAGCTaGATGCCAGGCCGTGAATGG +
Preference number: 2 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVGARTS*MPGREW
Trigger: CCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCC...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGGAGCAAGGACAAGCTaGATGCCAGGCCGTGAATGG +
Preference number: 2 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSGARTS*MPGREW
Trigger: CCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGTGGCTGGGCAGGGCCTaGCAGGTTCCAGGAGCAAGG +
Preference number: 2 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEWLGRA*QVPGAR
Trigger: CCTTGCTCCTGGAACCTGGCAGGCCCTGCCCAGCCA...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGGCAGTGAAGACCTGTaGGAGCCACACTGGATTCCA +
Preference number: 2 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVGSEDL*EPHWIP
Trigger: TGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGCTGTCTCCCTTAGGCTaGGAGCCTGGGTCCCACGGC +
Preference number: 2 (lower is better)
Translates to: GAGDHTENSSAYGPESPGLSPLG*EPGSHG
Trigger: GCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTTGGTCCAGAGAGCCCTaGGAGATCGCCAGTTTCCTC +
Preference number: 2 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSWSREP*EIASFL
Trigger: GAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCA...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCC +
Preference number: 2 (lower is better)
Translates to: PLRARELGLTIPFPAQGAVDPRG*GPFLTP
Trigger: GGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAAC...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR TCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATCTGGCCTCCGTGTGTaGGGACTGTGTGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPSGLRV*GLCVCA
Trigger: AGCACACACACACAGTCCTCACACACGGAGGCCAGA...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTCAAGCACAGGCCAACTaGTCCGGCTGTCCACGCGGC +
Preference number: 2 (lower is better)
Translates to: GAMVHSPLRARELGLTIPQAQAN*SGCPRG
Trigger: GCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGGCCGTGAATGGGGCTTaGACCCTTGTGTCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: RRGRLGAASPEPAGETEVAVNGA*TLVSFG
Trigger: ACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGC...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTGGCTGGGCAGGGCCTaGCAGGTTCCAGGAGCAAGG +
Preference number: 2 (lower is better)
Translates to: GAMVHSPLRARELGLTIPWLGRA*QVPGAR
Trigger: CCTTGCTCCTGGAACCTGGCAGGCCCTGCCCAGCCA...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCACCCCTCTCTCAAAGGTaGCATGGTTCATTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: SPPTARRGRLGAASPEPAPLSQR*HGSFPS
Trigger: AGAGGGGAATGAACCATGGCACCTTTGAGAGAGGGG...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAGCATCTCAGGTCAAGTaGGAGGGGGACCCCATTCGA +
Preference number: 2 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPASQVK*EGDPIR
Trigger: TCGAATGGGGTCCCCCTCCCACTTGACCTGAGATGC...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGCCCACGGCCTGTGTCTaGCCTCCGTGTGTGAGGACT +
Preference number: 2 (lower is better)
Translates to: GAGDHTENSSAYGPESPGPTACV*PPCVRT
Trigger: AGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCC +
Preference number: 2 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSVDPRG*GPFLTP
Trigger: GGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAAC...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR TCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCC +
Preference number: 2 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVVDPRG*GPFLTP
Trigger: GGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAAC...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAGCCGTGAATGGGGCTTaGACCCTTGTGTCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPAVNGA*TLVSFG
Trigger: ACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGC...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAGGTCCTCTGTGTGGGTaGCATCAGGATCCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPGPLCG*HQDPGL
Trigger: CAGCCCGGGATCCTGATGGCACCCACACAGAGGACC...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 2 (lower is better)
Translates to: RRGRLGAASPEPAGETEVRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 2 (lower is better)
Translates to: QAQANCSGCPRGATELCLRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR CCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAGCATCTCAGGTCAAGTaGGAGGGGGACCCCATTCGA +
Preference number: 2 (lower is better)
Translates to: PLRARELGLTIPFPAQGAASQVK*EGDPIR
Trigger: TCGAATGGGGTCCCCCTCCCACTTGACCTGAGATGC...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGGTGTGCTTGTGTGAGTaGGGGTTCAGCCCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEVCLCE*GFSPPS
Trigger: GCTGGGAGGGCTGAACCCCCACTCACACAAGCACAC...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CAA 90 bp CGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATaGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGC +
Preference number: 2 (lower is better)
Translates to: RLSSWDEVAFQSRRA*PDQTRSQVYLRPPS
Trigger: GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR CAA 90 bp ACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTaGTGTGAGTGGGGGTTCAGCCCTCCCAGCATCTCAGGTCAAGTG +
Preference number: 2 (lower is better)
Translates to: TACVWPPCVRTVCVC*CEWGFSPPSISGQV
Trigger: CACTTGACCTGAGATGCTGGGAGGGCTGAACCCCCACTCACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGC +
Preference number: 2 (lower is better)
Translates to: RRGRLGAASPEPAGETEVIPLLL*EQTSGC
Trigger: GCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAAT...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGAACAGACTTCCGGCTaGTCCATAGACACTCTTGTT +
Preference number: 2 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVEQTSG*SIDTLV
Trigger: AACAAGAGTGTCTATGGAGCAGCCGGAAGTCTGTTC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCGGAGCAAGGACAAGCTaGATGCCAGGCCGTGAATGG +
Preference number: 2 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPGARTS*MPGREW
Trigger: CCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCC...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR CCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGGCATCTCAGGTCAAGTaGGAGGGGGACCCCATTCGA +
Preference number: 2 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVASQVK*EGDPIR
Trigger: TCGAATGGGGTCCCCCTCCCACTTGACCTGAGATGC...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCCCACGGCCTGTGTCTaGCCTCCGTGTGTGAGGACT +
Preference number: 2 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGPTACV*PPCVRT
Trigger: AGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCTGTCTCCCTTAGGCTaGGAGCCTGGGTCCCACGGC +
Preference number: 2 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFLSPLG*EPGSHG
Trigger: GCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGACTGTCTCCCTTAGGCTaGGAGCCTGGGTCCCACGGC +
Preference number: 2 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGLSPLG*EPGSHG
Trigger: GCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCTGCATGCCAGGCCGTaGATGGGGCTTGCACCCTTG +
Preference number: 2 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHLHARP*MGLAPL
Trigger: CAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAG...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTAGAGACAGCGTGAATTaGTGCCCATGTCCATGGAAA +
Preference number: 2 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSRDSVN*CPCPWK
Trigger: TTTCCATGGACATGGGCAGCAATTCACGCTGTCTCT...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCATGCCCCCTTCAGCACTaGCACAAATGTCCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPCPLQH*HKCPAL
Trigger: GAGGGCTGGACATTTGTGGCAGTGCTGAAGGGGGCA...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCATTTACTCGCCGGCAATaGCCCCTTCAGCACTGCCAC +
Preference number: 2 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPFTRRQ*PLQHCH
Trigger: GTGGCAGTGCTGAAGGGGGCATTGCCGGCGAGTAAA...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGGCAGTGAAGACCTGTaGGAGCCACACTGGATTCCA +
Preference number: 2 (lower is better)
Translates to: GAGDHTENSSAYGPESPGGSEDL*EPHWIP
Trigger: TGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGGCAGTGAAGACCTGTaGGAGCCACACTGGATTCCA +
Preference number: 2 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCGSEDL*EPHWIP
Trigger: TGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGACAAGAACCCCATCCTTaGGGGGCCGGCAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGQEPHP*GAGRER
Trigger: CCTTTCCCTGCCGGCCCCCCAAGGATGGGGTTCTTG...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGAACACAGGGGGAAAATaGGACCTTGGAGACAATAGG +
Preference number: 2 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVNTGGK*DLGDNR
Trigger: CCTATTGTCTCCAAGGTCCCATTTTCCCCCTGTGTT...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGTTTTCACAAGACCTATaGGACCACCTGGATCTTGCC +
Preference number: 2 (lower is better)
Translates to: RRGRLGAASPEPAGETEVFSQDL*DHLDLA
Trigger: GGCAAGATCCAGGTGGTCCCATAGGTCTTGTGAAAA...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGC +
Preference number: 2 (lower is better)
Translates to: PLRARELGLTIPFPAQGAIPLLL*EQTSGC
Trigger: GCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAAT...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAGTGTGTGTGCTTGTGTaGGTGGGGGTTCAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGVCVLV*VGVQPS
Trigger: GGAGGGCTGAACCCCCACTCACACAAGCACACACAC...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATGTGTGTGTGCTTGTGTaGGTGGGGGTTCAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHVCVLV*VGVQPS
Trigger: GGAGGGCTGAACCCCCACTCACACAAGCACACACAC...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATAATAGGGGGCCAGAGTaGGCCCCGTGGACAAGAACC +
Preference number: 2 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHNRGPE*APWTRT
Trigger: GGTTCTTGTCCACGGGGCTCACTCTGGCCCCCTATT...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATTCTCTTCAGGCAGGCTaGGGGGCCGCCATGGCTCAG +
Preference number: 2 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNSLQAG*GAAMAQ
Trigger: CTGAGCCATGGCGGCCCCTCAGCCTGCCTGAAGAGA...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAAGGATTGTCAGCAGCTaGAGAGGTCCTGGGGGTGAT +
Preference number: 2 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPRIVSS*RGPGGD
Trigger: ATCACCCCCAGGACCTCTTCAGCTGCTGACAATCCT...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTGACAGCGTGAATTGCTaGCCATGTCCATGGAAAAAT +
Preference number: 2 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSDSVNC*PCPWKN
Trigger: ATTTTTCCATGGACATGGGCAGCAATTCACGCTGTC...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTACTGGATTCCACTTCTaGTTTGAGAACAGACTTCCG +
Preference number: 2 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSTGFHF*FENRLP
Trigger: CGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGACTGGATTCCACTTCTaGTTTGAGAACAGACTTCCG +
Preference number: 2 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVTGFHF*FENRLP
Trigger: CGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGT...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 2 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR CCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTATGCCAGGCCGTGAATaGGGCTTGCACCCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: KLLRVWSREPWEIASFLSMPGRE*GLHPCV
Trigger: GACACAAGGGTGCAAGCCCCATTCACGGCCTGGCAT...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGATCTGGCCTCCGTGTGTaGGGACTGTGTGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGSGLRV*GLCVCA
Trigger: AGCACACACACACAGTCCTCACACACGGAGGCCAGA...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAACTGACAATATGACCTaGGTGAAAACACAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPTDNMT*VKTQGE
Trigger: TTCCCCCTGTGTTTTCACGCAGGTCATATTGTCAGT...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGCCGTGAATGGGGCTTaGACCCTTGTGTCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: KLLRVWSREPWEIASFLSAVNGA*TLVSFG
Trigger: ACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 2 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR CCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATAAACTCCTCCGCGTATaGTCCAGAGAGCCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHKLLRV*SREPWE
Trigger: CTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATATGGGAGAGCTGGAATaGGGCAGCCAAGCCCCTGCC +
Preference number: 2 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNMGELE*GSQAPA
Trigger: GGCAGGGGCTTGGCTGCCCCATTCCAGCTCTCCCAT...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGAACAGACTTCCGGCTaGTCCATAGACACTCTTGTT +
Preference number: 2 (lower is better)
Translates to: GAGDHTENSSAYGPESPGEQTSG*SIDTLV
Trigger: AACAAGAGTGTCTATGGAGCAGCCGGAAGTCTGTTC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGGCAGTGAAGACCTGTaGGAGCCACACTGGATTCCA +
Preference number: 2 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFGSEDL*EPHWIP
Trigger: TGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR TCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCC +
Preference number: 2 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRVDPRG*GPFLTP
Trigger: GGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAAC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR TCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGC +
Preference number: 2 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGIPLLL*EQTSGC
Trigger: GCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAAT...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGGCGCCACAGAACTCTaGCTGGTTGATCCGCGGGGC +
Preference number: 2 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSGATEL*LVDPRG
Trigger: GCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTACTGGATTCCACTTCTaGTTTGAGAACAGACTTCCG +
Preference number: 2 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCTGFHF*FENRLP
Trigger: CGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGT...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR GCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCACTGACAATATGACCTaGGTGAAAACACAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPTDNMT*VKTQGE
Trigger: TTCCCCCTGTGTTTTCACGCAGGTCATATTGTCAGT...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTTTCGCCTCAGCAGCTaGGATGAAGTTGCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: KLLRVWSREPWEIASFLSFRLSS*DEVAFQ
Trigger: CTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAA...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATATGCCAGGCCGTGAATaGGGCTTGCACCCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNMPGRE*GLHPCV
Trigger: GACACAAGGGTGCAAGCCCCATTCACGGCCTGGCAT...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAAGAGACAGCGTGAATTaGTGCCCATGTCCATGGAAA +
Preference number: 2 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGRDSVN*CPCPWK
Trigger: TTTCCATGGACATGGGCAGCAATTCACGCTGTCTCT...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CAA 90 bp TATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: YTVSVLYFASAAGMK*LSRAAGHCLTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR GCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGGGCGCCACAGAACTCTaGCTGGTTGATCCGCGGGGC +
Preference number: 2 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLGATEL*LVDPRG
Trigger: GCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR GCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTCAAGCACAGGCCAACTaGTCCGGCTGTCCACGCGGC +
Preference number: 2 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAQAQAN*SGCPRG
Trigger: GCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR CCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTAGCCCTCTCTTCCGATaGCTGGCTGGGCAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCSPLFR*LAGQGL
Trigger: CAGGCCCTGCCCAGCCAGCCATCGGAAGAGAGGGCT...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCC +
Preference number: 2 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLVDPRG*GPFLTP
Trigger: GGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAAC...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR GCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATACTGACAATATGACCTaGGTGAAAACACAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNTDNMT*VKTQGE
Trigger: TTCCCCCTGTGTTTTCACGCAGGTCATATTGTCAGT...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR CAA 90 bp AAGTTTGGTGAGAAGTGCTCGATTAGTTCAGACAACATCTGGCACTaGATGTCTGTCCTTCCCTCCTGCTGGTCATTGTGCAGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: KFGEKCSISSDNIWH*MSVLPSCWSLCSSG
Trigger: TCCAGAACTGCACAATGACCAGCAGGAGGGAAGGACAGACATCAAGTGCCAGATGTTGTCTGAACTAATCGAGCACTTCTCACCAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR TCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTCCTCAGCAGCTGGGATaGAGTTGCTTTCCAGAGCCG +
Preference number: 2 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCPQQLG*SCFPEP
Trigger: CGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGG...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGGCGCCACAGAACTCTaGCTGGTTGATCCGCGGGGC +
Preference number: 2 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQGATEL*LVDPRG
Trigger: GCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTCAAGGACAAGCTGCATaGCAGGCCGTGAATGGGGCT +
Preference number: 2 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCQGQAA*QAVNGA
Trigger: AGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTG...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTGGAGCAAGGACAAGCTaGATGCCAGGCCGTGAATGG +
Preference number: 2 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCGARTS*MPGREW
Trigger: CCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCC...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 2 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTAAAGGCAACTATCAGTaGCTAGGGCCAGCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCKGNYQ*LGPALG
Trigger: TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTT...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR-3UTR TCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGC +
Preference number: 2 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCIPLLL*EQTSGC
Trigger: GCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAAT...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CCA 72 bp GGTGAGACTGAGGTGGCCTGGGAGGCATGCGCCCGGTaGAGGGGCTCCATGGGAGAGCTGGAATGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: GETEVAWEACAR*RGSMGELEWGS
Trigger: GCTGCCCCATTCCAGCTCTCCCATGGAGCCCCTCCACCGGGCGCATGCCTCCCAGGCCACCTCAGTCTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CAA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCACAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: SPPTARRGRLGAASPEPAQNSAW*IRGAEA
Trigger: GGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTG...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR GCA 72 bp AAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTaGACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTC +
Preference number: 3 (lower is better)
Translates to: KGTRTGPDHPFP*TGRRAKLRSPL
Trigger: GAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CAA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 3 (lower is better)
Translates to: SPPTARRGRLGAASPEPAAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CAA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 3 (lower is better)
Translates to: PTARRGRLGAASPEPAGEAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CCA 72 bp GCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAGGCCCATTTCTTACTC +
Preference number: 3 (lower is better)
Translates to: APAVHAAPQNSA*LIRGAEAHFLL
Trigger: GAGTAAGAAATGGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR TCA 72 bp GCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGTGTaGGGACTGTGTGTGTGTGCTTGTGTGAGTGGGGGT +
Preference number: 3 (lower is better)
Translates to: AWVPRPVSGLRV*GLCVCACVSGG
Trigger: ACCCCCACTCACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGACCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR TCA 72 bp GCCTCCCAACCGCATTCCTGCCTGTGTAGCAGGCGGTaGGCACCCAGGAGGGGCACATACCTCTCCAAGCCT +
Preference number: 3 (lower is better)
Translates to: ASQPHSCLCSRR*APRRGTYLSKP
Trigger: AGGCTTGGAGAGGTATGTGCCCCTCCTGGGTGCTCACCGCCTGCTACACAGGCAGGAATGCGGTTGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR GCA 72 bp GGGCCTGCCAGGTTCCAGGAGCAAGGACAAGCTGCATaGCAGGCCGTGAATGGGGCTTGCACCCTTGTGTCC +
Preference number: 3 (lower is better)
Translates to: GPARFQEQGQAA*QAVNGACTLVS
Trigger: GGACACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTGGAACCTGGCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 72 bp ACACAAAAACCACAGTCTCCTTCCGGCCAGCTGGGCTaGCAGCCCGACCTGCCTCCCAACCGCATTCCTGCC +
Preference number: 3 (lower is better)
Translates to: TQKPQSPSGQLG*QPDLPPNRIPA
Trigger: GGCAGGAATGCGGTTGGGAGGCAGGTCGGGCTGCCAGCCCAGCTGGCCGGAAGGAGACTGTGGTTTTTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCCAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTQNSAW*IRGAEA
Trigger: GGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTG...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR TCA 72 bp GGCGCCACAGAACTCTGCCTGGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCCAAAGCCAGGAAGGCC +
Preference number: 3 (lower is better)
Translates to: GATELCLVDPRG*GPFLTPKARKA
Trigger: GGCCTTCCTGGCTTTGGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR CCA 72 bp CTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATaGCTCAGCCCTCTCTTCCGATGGCTGGCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: LRAGELLSPKPP*LSPLFRWLAGQ
Trigger: CTGCCCAGCCAGCCATCGGAAGAGAGGGCTGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: KLLRVWSREPWEIASFLSQNSAW*IRGAEA
Trigger: GGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCAGAGCCGCAGGGCATaGCCTGACCAGACCAGGTCA +
Preference number: 3 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLQSRRA*PDQTRS
Trigger: TGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 3 (lower is better)
Translates to: QEQGQAACQAVNGACTLVAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 3 (lower is better)
Translates to: GAGDHTENSSAYGPESPGAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGAAGAGACAGCGTGAATaGCTGCCCATGTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: PTARRGRLGAASPEPAGEKRQRE*LPMSME
Trigger: TTCCATGGACATGGGCAGCAATTCACGCTGTCTCTT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CAA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGGCCGTGAATGGGGCTaGCACCCTTGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: GAGDHTENSSAYGPESPGGREWG*HPCVLW
Trigger: CCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 72 bp CAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATaGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCC +
Preference number: 3 (lower is better)
Translates to: QFPLFRQAEGPP*LRAGELLSPKP
Trigger: GGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAGGGACCACCTGGATCTaGCCCCAAAGAGGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPGTTWI*PQRGPL
Trigger: CAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCCC...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR GCA 72 bp TGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTaGTTGTGTGAGTGGGGGTTCAGCCCTCCCAGCATC +
Preference number: 3 (lower is better)
Translates to: CVWPPCVRTVCV*LCEWGFSPPSI
Trigger: GATGCTGGGAGGGCTGAACCCCCACTCACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGGCCGTGAATGGGGCTaGCACCCTTGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: KLLRVWSREPWEIASFLSGREWG*HPCVLW
Trigger: CCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGATTCCACTTCTGCTTaGAGAACAGACTTCCGGCTG +
Preference number: 3 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSDSTSA*RTDFRL
Trigger: CAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAATC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATGGCCGTGAATGGGGCTaGCACCCTTGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHGREWG*HPCVLW
Trigger: CCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCC...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CCA 72 bp CACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTaGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: HRKLLRVWSREP*EIASFLSSGRL
Trigger: CAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 72 bp AGGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATaGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: RSWRPHRKLLRV*SREPWEIASFL
Trigger: GAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAAGAGACAGCGTGAATaGCTGCCCATGTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: GAGDHTENSSAYGPESPGKRQRE*LPMSME
Trigger: TTCCATGGACATGGGCAGCAATTCACGCTGTCTCTT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGGATTCCACTTCTGCTTaGAGAACAGACTTCCGGCTG +
Preference number: 3 (lower is better)
Translates to: QEQGQAACQAVNGACTLVDSTSA*RTDFRL
Trigger: CAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAATC...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR TCA 72 bp GGTTCCAGGAGCAAGGACAAGCTGCATGCCAGGCCGTaGATGGGGCTTGCACCCTTGTGTCCTTTGGTTTTG +
Preference number: 3 (lower is better)
Translates to: GSRSKDKLHARP*MGLAPLCPLVL
Trigger: CAAAACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 72 bp GAACACAGGAGAAGAGAACTAGATCTGTCAGGGGCATaGGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGG +
Preference number: 3 (lower is better)
Translates to: EHRRRELDLSGA*VGSGVATKGTG
Trigger: CCCAGTTCCCTTGGTGGCAACCCCAGACCCAACCCATGCCCCTGACAGATCTAGTTCTCTTCTCCTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CAA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCATTGTGTCCTTTGGTTTaGTTAATACTCTTACAGGAG +
Preference number: 3 (lower is better)
Translates to: SPPTARRGRLGAASPEPALCPLV*LILLQE
Trigger: CTCCTGTAAGAGTATTAACAAAACCAAAGGACACAA...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR GCA 72 bp AGCCTTTTCACAAGACCTATGGGACCACCTGGATCTTaGCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGG +
Preference number: 3 (lower is better)
Translates to: SLFTRPMGPPGS*PKEVLCVGAIR
Trigger: CCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCCCATAGGTCTTGTGAAAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CCA 72 bp AAGAGAACTAGATCTGTCAGGGGCATGGGTTGGGTCTaGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAG +
Preference number: 3 (lower is better)
Translates to: KRTRSVRGMGWV*GCHQGNWGDKK
Trigger: CTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACCCATGCCCCTGACAGATCTAGTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CAA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTCAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCQNSAW*IRGAEA
Trigger: GGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTG...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCTTGTGTCCTTTGGTTTaGTTAATACTCTTACAGGAG +
Preference number: 3 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGLCPLV*LILLQE
Trigger: CTCCTGTAAGAGTATTAACAAAACCAAAGGACACAA...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTTTGTGTCCTTTGGTTTaGTTAATACTCTTACAGGAG +
Preference number: 3 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSLCPLV*LILLQE
Trigger: CTCCTGTAAGAGTATTAACAAAACCAAAGGACACAA...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAGCACCCTTGTGTCCTTaGGTTTTGTTAATACTCTTA +
Preference number: 3 (lower is better)
Translates to: PLRARELGLTIPFPAQGAAPLCP*VLLILL
Trigger: TAAGAGTATTAACAAAACCAAAGGACACAAGGGTGC...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR-3UTR CAA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 3 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR-3UTR CAA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTGCACCCTTGTGTCCTTaGGTTTTGTTAATACTCTTA +
Preference number: 3 (lower is better)
Translates to: GAMVHSPLRARELGLTIPAPLCP*VLLILL
Trigger: TAAGAGTATTAACAAAACCAAAGGACACAAGGGTGC...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR TCA 72 bp TTACTCCCAAAGCCAGGAAGGCCCCAGGCTGGTTTGTaGCTGACTGCATTTAGGTTTGCCATGGTGAAAAAG +
Preference number: 3 (lower is better)
Translates to: LLPKPGRPQAGL*LTAFRFAMVKK
Trigger: CTTTTTCACCATGGCAAACCTAAATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCTGGCTTTGGGAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR GCA 72 bp CAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTaGACCCTTGTGTCCTTTGGTTTTGTTAATACTCTT +
Preference number: 3 (lower is better)
Translates to: QGQAACQAVNGA*TLVSFGFVNTL
Trigger: AAGAGTATTAACAAAACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CCA 72 bp GAAATGTCGCTGGGACAGTTAAACCGTGTCCCACACTaGACTCAAAGGGAACACAGGAGAAGAGAACTAGAT +
Preference number: 3 (lower is better)
Translates to: EMSLGQLNRVPH*TQREHRRRELD
Trigger: ATCTAGTTCTCTTCTCCTGTGTTCCCTTTGAGTCCAGTGTGGGACACGGTTTAACTGTCCCAGCGACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CCA 72 bp ATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTaGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTG +
Preference number: 3 (lower is better)
Translates to: IYSLSFIFRLSS*DEVAFQSRRAL
Trigger: CAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
3UTR TCA 72 bp AAAGATTTGCATATGCTAAATAGGATTGTCAGCAGCTaGAGAGGTCCTGGGGGTGATTGGACTAGTAAAATA +
Preference number: 3 (lower is better)
Translates to: KDLHMLNRIVSS*RGPGGDWTSKI
Trigger: TATTTTACTAGTCCAATCACCCCCAGGACCTCTTCAGCTGCTGACAATCCTATTTAGCATATGCAAATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCCGGGGGAGCGATCCCTaGATCCTACGGGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLRGSDP*ILRAPP
Trigger: CGGCGGCGCCCGTAGGATGCAGGGATCGCTCCCCCG...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGTGCCTGTGGGGAAGCTaGTGGTCCCCCGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVCLWGS*WSPGRA
Trigger: GGCCCGGCCGGGGGACCAGCAGCTTCCCCACAGGCA...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGTGGCCTGGGAGGCATaGGCCCGGTGGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVVAWEA*ARWRGS
Trigger: GGAGCCCCTCCACCGGGCGCATGCCTCCCAGGCCAC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGGGCGGCTGCTGCTTaGCGCGGACTCGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLWAAAA*RGLGSA
Trigger: CGCCGAGCCGAGTCCGCGCCAAGCAGCAGCCGCCCA...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCGCTGTCCCTGGGCACTaGTCCGGCGCAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLAVPGH*SGAGAR
Trigger: CCTGGCCCCTGCGCCGGACCAGTGCCCAGGGACAGC...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACCGGGGGAGCGATCCCTaGATCCTACGGGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHRGSDP*ILRAPP
Trigger: CGGCGGCGCCCGTAGGATGCAGGGATCGCTCCCCCG...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCGCAGGCCCCTCTGGATaGGGGCCAGGGCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLAGPSG*GPGPAG
Trigger: TCCAGCTGGCCCTGGCCCGCATCCAGAGGGGCCTGC...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGTGGCCTGGGAGGCATaGGCCCGGTGGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVVAWEA*ARWRGS
Trigger: GGAGCCCCTCCACCGGGCGCATGCCTCCCAGGCCAC...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGCTGTCCCTGGGCACTaGTCCGGCGCAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRAVPGH*SGAGAR
Trigger: CCTGGCCCCTGCGCCGGACCAGTGCCCAGGGACAGC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGGACTGGGCTGTCCCTaGGCACTGGTCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVGLGCP*ALVRRR
Trigger: CCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGCTCCTTCCGGCCAGCTaGGCTGGCAGCCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGELLPAS*AGSPTC
Trigger: GCAGGTCGGGCTGCCAGCCCAGCTGGCCGGAAGGAG...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCAGGGCTGCGGGCTTCTaGGGCCGCTGCCGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRRAAGF*GRCRRR
Trigger: TCTCCTGCGGCAGCGGCCTCAGAAGCCCGCAGCCCT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGAGGGCTGCGGGCTTCTaGGGCCGCTGCCGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLRAAGF*GRCRRR
Trigger: TCTCCTGCGGCAGCGGCCTCAGAAGCCCGCAGCCCT...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACTGCCGCCAGTCGGCCTaGGATGCACTGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHCRQSA*DALASA
Trigger: GGCCGAGGCCAGTGCATCTCAGGCCGACTGGCGGCA...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTTGCCGCCAGTCGGCCTaGGATGCACTGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSCRQSA*DALASA
Trigger: GGCCGAGGCCAGTGCATCTCAGGCCGACTGGCGGCA...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGGAGGGCCCGCTGCCGTaGTCCTGGCTCCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVEGPLP*SWLLEA
Trigger: GGCTTCGAGGAGCCAGGAGCACGGCAGCGGGCCCTC...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGGTGAGGACGCTGACTaGGCTGAGGGCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRGEDAD*AEGPLP
Trigger: CGGCAGCGGGCCCTCAGCGCAGTCAGCGTCCTCACC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGGACTGGGCTGTCCCTaGGCACTGGTCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRGLGCP*ALVRRR
Trigger: CCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGGGGTGGCAATGCAGCTaGGCAGCTGGCCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLGWQCS*AAGPGR
Trigger: CCGCCCAGGGCCAGCTGCCCAGCTGCATTGCCACCC...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCGGGTGGCAATGCAGCTaGGCAGCTGGCCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGGWQCS*AAGPGR
Trigger: CCGCCCAGGGCCAGCTGCCCAGCTGCATTGCCACCC...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCCCCGGGGGTGCCCTaGCCTGGTTGCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVSPGVP*PGCSPS
Trigger: GGAAGGCGAGCAACCAGGCCAGGGCACCCCCGGGGA...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGTCCCCGGGGGTGCCCTaGCCTGGTTGCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLSPGVP*PGCSPS
Trigger: GGAAGGCGAGCAACCAGGCCAGGGCACCCCCGGGGA...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTTCCCCGGGGGTGCCCTaGCCTGGTTGCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVSPGVP*PGCSPS
Trigger: GGAAGGCGAGCAACCAGGCCAGGGCACCCCCGGGGA...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGCCGCACCCTGGGGCCTaGGGTTCCGCTTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGEPHPGA*GSAFHC
Trigger: GCAGTGGAAAGCGGAACCCCAGGCCCCAGGGTGCGG...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGAGACTGAGGTGGCCTaGGAGGCATGCGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVETEVA*EACARW
Trigger: CCACCGGGCGCATGCCTCCCAGGCCACCTCAGTCTC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGCGAGGCAGCAGGCCTaGGTCGCTGTCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLARQQA*VAVPQL
Trigger: GAGCTGAGGGACAGCGACTCAGGCCTGCTGCCTCGC...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAAGGGCTGCGGGCTTCTaGGGCCGCTGCCGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPRAAGF*GRCRRR
Trigger: TCTCCTGCGGCAGCGGCCTCAGAAGCCCGCAGCCCT...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGCCGCCAGTCGGCCTaGGATGCACTGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPCRQSA*DALASA
Trigger: GGCCGAGGCCAGTGCATCTCAGGCCGACTGGCGGCA...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACCCGCTGCCCGCCTGCTaGCGGAAGAGGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHPLPAC*RKRKEA
Trigger: TGCCTCCTTCCTCTTCCGTCAGCAGGCGGGCAGCGG...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCCCGCTGCCCGCCTGCTaGCGGAAGAGGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGPLPAC*RKRKEA
Trigger: TGCCTCCTTCCTCTTCCGTCAGCAGGCGGGCAGCGG...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCCTTCGGAGAGGCCGCTaGCCGCCTGCTGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLLRRGR*PPADGR
Trigger: TCTTCCGTCAGCAGGCGGGCAGCGGCCTCTCCGAAG...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTCCGAGGTTCCGGGACTaGGCTGTCCCTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVPRFRD*AVPGHW
Trigger: CCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGG...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCTGGGAGGTCAGCATCTaGGGCCCGCCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGWEVSI*GPPGSS
Trigger: GGAGGAGCCAGGCGGGCCCCAGATGCTGACCTCCCA...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTTGGGAGGTCAGCATCTaGGGCCCGCCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSWEVSI*GPPGSS
Trigger: GGAGGAGCCAGGCGGGCCCCAGATGCTGACCTCCCA...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGCGGGGAGTAGGGGGTaGCAATGCAGCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQAGSRG*QCSWAA
Trigger: AGCTGCCCAGCTGCATTGCCACCCCCTACTCCCCGC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGGAGGGGCCTCTaGGCCACCGGACACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLIRRGL*ATGHRL
Trigger: CAGCCTGTGTCCGGTGGCCCAGAGGCCCCTCCGGAT...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTATCCGGAGGGGCCTCTaGGCCACCGGACACAGGCTG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVIRRGL*ATGHRL
Trigger: CAGCCTGTGTCCGGTGGCCCAGAGGCCCCTCCGGAT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCCTGGCTCCAGGTCCTaGAATCCGGAGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQPGSRS*NPEGPL
Trigger: CAGAGGCCCCTCCGGATTCCAGGACCTGGAGCCAGG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTGAGGCATGCGCCCGGTaGAGGGGCTCCATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSEACAR*RGSMGE
Trigger: CTCTCCCATGGAGCCCCTCCACCGGGCGCATGCCTC...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGAGACTGAGGTGGCCTaGGAGGCATGCGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVETEVA*EACARW
Trigger: CCACCGGGCGCATGCCTCCCAGGCCACCTCAGTCTC...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCCAGGGACTCCCGTGTaGACCTGCGGAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLPGTPV*TCGSCW
Trigger: CCAGCAGCTTCCGCAGGTTCACACGGGAGTCCCTGG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCCAGGGCACCAGCAGTaGTGTGTGGTGGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQPGHQQ*CVVALA
Trigger: AGCGAGAGCCACCACACATCACTGCTGGTGCCCTGG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGGCGTCCGCAGTGACTTaGTGGGGCCCATCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGEASAVT*WGPSRQ
Trigger: TTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGC...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCATCATCACGTAGGCGATaGGGCCCTCTCGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPPTARRGRLGAASPEPASSRRR*GPLAQG
Trigger: CCCCTGAGCGAGAGGGCCTCATCGCCTACGTGATGA...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCCTGCATGCCAGGCCGTaGATGGGGCTTGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLLHARP*MGLAPL
Trigger: CAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAG...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTTCTCTTCAGGCAGGCTaGGGGGCCGCCATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSSLQAG*GAAMAQ
Trigger: CTGAGCCATGGCGGCCCCTCAGCCTGCCTGAAGAGA...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCTGTGTAGCAGGCGGTaGGCACCCAGGAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLLCSRR*APRRGT
Trigger: TGTGCCCCTCCTGGGTGCTCACCGCCTGCTACACAG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTCTGTGTAGCAGGCGGTaGGCACCCAGGAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSLCSRR*APRRGT
Trigger: TGTGCCCCTCCTGGGTGCTCACCGCCTGCTACACAG...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGTCGTGTCTGGCGGGTaGTCTAGCATCACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVVVSGG*SSITGR
Trigger: CCGCCCTGTGATGCTAGAGCACCCGCCAGACACGAC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGAGTAGGGGGTGGCAATaGAGCTGGGCAGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVSRGWQ*SWAAGP
Trigger: AGGGCCAGCTGCCCAGCTGCATTGCCACCCCCTACT...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCAGTAGGGGGTGGCAATaGAGCTGGGCAGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLSRGWQ*SWAAGP
Trigger: AGGGCCAGCTGCCCAGCTGCATTGCCACCCCCTACT...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGAGCGTTGCAGCAGGTaGCTGCGGAAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPPTARRGRLGAASPEPAERCSR*LRKALW
Trigger: CCAGAGAGCCTTCCGCAGGCACCTGCTGCAACGCTC...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGAGCGTTGCAGCAGGTaGCTGCGGAAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVERCSR*LRKALW
Trigger: CCAGAGAGCCTTCCGCAGGCACCTGCTGCAACGCTC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTCTTCGGAGAGGCCGCTaGCCGCCTGCTGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSLRRGR*PPADGR
Trigger: TCTTCCGTCAGCAGGCGGGCAGCGGCCTCTCCGAAG...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGGCGCCACAGAACTCTaGCTGGTTGATCCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRGATEL*LVDPRG
Trigger: GCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTGGCTGGGCAGGGCCTaGCAGGTTCCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVWLGRA*QVPGAR
Trigger: CCTTGCTCCTGGAACCTGGCAGGCCCTGCCCAGCCA...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCGTGGCCTGGGAGGCATaGGCCCGGTGGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPVAWEA*ARWRGS
Trigger: GGAGCCCCTCCACCGGGCGCATGCCTCCCAGGCCAC...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGTGGCCTGGGAGGCATaGGCCCGGTGGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTVAWEA*ARWRGS
Trigger: GGAGCCCCTCCACCGGGCGCATGCCTCCCAGGCCAC...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCTGGCAGCCCGACCTaGCTCCCAACCGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVAGSPT*LPTAFL
Trigger: CAGGAATGCGGTTGGGAGGCAGGTCGGGCTGCCAGC...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGCTGGCAGCCCGACCTaGCTCCCAACCGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSAGSPT*LPTAFL
Trigger: CAGGAATGCGGTTGGGAGGCAGGTCGGGCTGCCAGC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCCTCTGGGGTCTGCTTaGTGGACTCCTCCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQPLGSA*WTPPPC
Trigger: GCACGGAGGAGGAGTCCAGCAAGCAGACCCCAGAGG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450102.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTGGGCGGCTGCTGCTTaGCGCGGACTCGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCWAAAA*RGLGSA
Trigger: CGCCGAGCCGAGTCCGCGCCAAGCAGCAGCCGCCCA...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGTGGGCGGCTGCTGCTTaGCGCGGACTCGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTWAAAA*RGLGSA
Trigger: CGCCGAGCCGAGTCCGCGCCAAGCAGCAGCCGCCCA...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGGCTCTCCTGCAAGGTaGTTGAGCCGCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQGSPAR*LSRGLA
Trigger: AGCAAGCCCGCGGCTCAACCACCTTGCAGGAGAGCC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCGAGGAGGTGGCTTCCTaGGGATGTGGCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLEEVAS*GCGLWV
Trigger: GACCCAGAGGCCACATCCCCAGGAAGCCACCTCCTC...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGAGGAGGTGGCTTCCTaGGGATGTGGCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQEEVAS*GCGLWV
Trigger: GACCCAGAGGCCACATCCCCAGGAAGCCACCTCCTC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCGCTCCTCCGATGGCGTaGTCGTGTCTGGCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGAPPMA*SCLAGA
Trigger: AGCACCCGCCAGACACGACCACGCCATCGGAGGAGC...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGCGGGGAGTAGGGGGTaGCAATGCAGCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSAGSRG*QCSWAA
Trigger: AGCTGCCCAGCTGCATTGCCACCCCCTACTCCCCGC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTGCGGGGAGTAGGGGGTaGCAATGCAGCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSAGSRG*QCSWAA
Trigger: AGCTGCCCAGCTGCATTGCCACCCCCTACTCCCCGC...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCACCTTCTCCGTCTCTaGGGGTGGCGGGGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRHLLRL*GWRGVG
Trigger: CCCTACTCCCCGCCACCCCCAGAGACGGAGAAGGTG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCACTCGGCCACAGCGATaGGCACACACACGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLTRPQR*AHTRAL
Trigger: CAGAGCCCGTGTGTGTGCCCATCGCTGTGGCCGAGT...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCCTGGCTCCAGGTCCTaGAATCCGGAGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLPGSRS*NPEGPL
Trigger: CAGAGGCCCCTCCGGATTCCAGGACCTGGAGCCAGG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGCCTGGCTCCAGGTCCTaGAATCCGGAGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLPGSRS*NPEGPL
Trigger: CAGAGGCCCCTCCGGATTCCAGGACCTGGAGCCAGG...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCGGTCTCACCGCACCCTaGGGCCTGGGGTTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGGLTAP*GLGFRF
Trigger: AAAGCGGAACCCCAGGCCCCAGGGTGCGGTGAGACC...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGCCACCAGACCTTCCCTaGGGCCTGTGTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVPPDLP*GLCGVH
Trigger: GTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGG...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCCAAGAACCCCATCCTTaGGGGGCCGGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLQEPHP*GAGRER
Trigger: CCTTTCCCTGCCGGCCCCCCAAGGATGGGGTTCTTG...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTCTCTCTTCCGATGGCTaGCTGGGCAGGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSLSSDG*LGRACQ
Trigger: CTGGCAGGCCCTGCCCAGCCAGCCATCGGAAGAGAG...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGCTCTCTTCCGATGGCTaGCTGGGCAGGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLLSSDG*LGRACQ
Trigger: CTGGCAGGCCCTGCCCAGCCAGCCATCGGAAGAGAG...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGAGCCCTCTCTTCCGATaGCTGGCTGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLSPLFR*LAGQGL
Trigger: CAGGCCCTGCCCAGCCAGCCATCGGAAGAGAGGGCT...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGCAGGTGAGACTGAGGTaGCCTGGGAGGCATGCGCCC +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLQVRLR*PGRHAP
Trigger: GGGCGCATGCCTCCCAGGCCACCTCAGTCTCACCTG...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCACTCCTTCCGGCCAGCTaGGCTGGCAGCCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSLLPAS*AGSPTC
Trigger: GCAGGTCGGGCTGCCAGCCCAGCTGGCCGGAAGGAG...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGCTCCTGCAAGGTGGTTaGGCCGCGGGCTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVLLQGG*AAGLLL
Trigger: GAGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAG...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCTCCTGCAAGGTGGTTaGGCCGCGGGCTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRLLQGG*AAGLLL
Trigger: GAGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGTCTTCCCTGCGGACCTaGGGGTCTGCTGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQSSLRT*GSADRG
Trigger: GCCTCTATCAGCAGACCCTCAGGTCCGCAGGGAAGA...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCCTCGCCTGCGAAAGGTaGAAATGCTCCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGLACER*KCSRGW
Trigger: CCAGCCGCGGGAGCATTTTCACCTTTCGCAGGCGAG...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCTCGCCTGCGAAAGGTaGAAATGCTCCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLLACER*KCSRGW
Trigger: CCAGCCGCGGGAGCATTTTCACCTTTCGCAGGCGAG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGCCAGGGCACCAGCAGTaGTGTGTGGTGGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVPGHQQ*CVVALA
Trigger: AGCGAGAGCCACCACACATCACTGCTGGTGCCCTGG...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGGGCTGCGGGCTTCTaGGGCCGCTGCCGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGRAAGF*GRCRRR
Trigger: TCTCCTGCGGCAGCGGCCTCAGAAGCCCGCAGCCCT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACAGGGCTGCGGGCTTCTaGGGCCGCTGCCGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHRAAGF*GRCRRR
Trigger: TCTCCTGCGGCAGCGGCCTCAGAAGCCCGCAGCCCT...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCAGAGGAGGCAGTCGCTaGCACCTGGCTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGRGGSR*HLAPGP
Trigger: AGGACCTGGAGCCAGGTGTCAGCGACTGCCTCCTCT...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTAGAGGAGGCAGTCGCTaGCACCTGGCTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVRGGSR*HLAPGP
Trigger: AGGACCTGGAGCCAGGTGTCAGCGACTGCCTCCTCT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACGCGTCCGCAGTGACTTaGTGGGGCCCATCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHASAVT*WGPSRQ
Trigger: TTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGC...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTACGCAGCGTCCGCAGTaGCTTGATGGGGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSTQRPQ*LDGAHL
Trigger: GAGATGGGCCCCATCAAGTCACTGCGGACGCTGCGT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTACGCAGCGTCCGCAGTaGCTTGATGGGGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVTQRPQ*LDGAHL
Trigger: GAGATGGGCCCCATCAAGTCACTGCGGACGCTGCGT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCGCCGGAGTGTGGTGGTaGTGGGCTCGTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLAGVWW*WARRRS
Trigger: AGATCTCCTACGAGCCCATCACCACCACACTCCGGC...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCATGCCTGTGGGGAAGCTaGTGGTCCCCCGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPCLWGS*WSPGRA
Trigger: GGCCCGGCCGGGGGACCAGCAGCTTCCCCACAGGCA...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGAGGCTCTCCTCACGTTaGCTGTGGGGAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGERLSSR*LWGSCW
Trigger: CCAGCAGCTTCCCCACAGGCAACGTGAGGAGAGCCT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGCGCTTCTCGATGGCTaGCAGGGACTCCCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVALLDG*QGLPCE
Trigger: TTCACACGGGAGTCCCTGGCAGCCATCGAGAAGCGC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGTTGAGCCGCGGGCTTaGTTCTCTGCCATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SPPTARRGRLGAASPEPAVEPRA*FSAMRF
Trigger: GAAGCGCATGGCAGAGAAGCAAGCCCGCGGCTCAAC...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTAGCTTTTTGGAGGCCTaGAGGTCCAGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVSFLEA*RSSWGR
Trigger: CCGGCCCCAGCTGGACCTGCAGGCCTCCAAAAAGCT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACGTCGTGTCTGGCGGGTaGTCTAGCATCACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHVVSGG*SSITGR
Trigger: CCGCCCTGTGATGCTAGAGCACCCGCCAGACACGAC...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGTGAGGACGCTGACTaGGCTGAGGGCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHGEDAD*AEGPLP
Trigger: CGGCAGCGGGCCCTCAGCGCAGTCAGCGTCCTCACC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCACCGACAAGTTGCTCATaGGGGACAGGCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPPTARRGRLGAASPEPAPTSCS*GTGPAP
Trigger: TGGAGCTGGGCCTGTCCCGCATGAGCAACTTGTCGG...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGGCAGCACCGACAAGTTaGTCATGCGGGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGEAAPTS*SCGTGP
Trigger: TGGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGC...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGCAGGCCCCTCTGGATaGGGGCCAGGGCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRAGPSG*GPGPAG
Trigger: TCCAGCTGGCCCTGGCCCGCATCCAGAGGGGCCTGC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTAGTAGGGGGTGGCAATaGAGCTGGGCAGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSSRGWQ*SWAAGP
Trigger: AGGGCCAGCTGCCCAGCTGCATTGCCACCCCCTACT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCACTGGATCCCCGGGGGTaGCCTGGCCTGGTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPLDPRG*PGLVAR
Trigger: GCGAGCAACCAGGCCAGGGCACCCCCGGGGATCCAG...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCCAGTCGGCCTGAGATaGACTGGCCTCGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRPVGLR*TGLGLR
Trigger: TCTGAGGCCGAGGCCAGTGCATCTCAGGCCGACTGG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCCGAGGTCAGGGATCTaGTCCAGGAGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRPRSGI*SRSSAV
Trigger: CACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACGCCGACACCTCTTCGTaGTTGCGCCGGAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHADTSS*LRRSVV
Trigger: CACCACACTCCGGCGCAAGCACGAAGAGGTGTCGGC...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACGAGCGTTGCAGCAGGTaGCTGCGGAAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHERCSR*LRKALW
Trigger: CCAGAGAGCCTTCCGCAGGCACCTGCTGCAACGCTC...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGAGCGTTGCAGCAGGTaGCTGCGGAAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRERCSR*LRKALW
Trigger: CCAGAGAGCCTTCCGCAGGCACCTGCTGCAACGCTC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAGGCGCCACAGAACTCTaGCTGGTTGATCCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPGATEL*LVDPRG
Trigger: GCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCACAAGCACAGGCCAACTaGTCCGGCTGTCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPQAQAN*SGCPRG
Trigger: GCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGGGTCCTCTGTGTGGGTaGCATCAGGATCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLGPLCG*HQDPGL
Trigger: CAGCCCGGGATCCTGATGGCACCCACACAGAGGACC...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGGTCCTCTGTGTGGGTaGCATCAGGATCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVGPLCG*HQDPGL
Trigger: CAGCCCGGGATCCTGATGGCACCCACACAGAGGACC...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGGTCCTCTGTGTGGGTaGCATCAGGATCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSGPLCG*HQDPGL
Trigger: CAGCCCGGGATCCTGATGGCACCCACACAGAGGACC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGCTGGGATTCCTGCTTaGTGGACTCCTCCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQAGIPA*WTPPPC
Trigger: GCACGGAGGAGGAGTCCAGCAAGCAGGAATCCCAGC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGCTGGGATTCCTGCTTaGTGGACTCCTCCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVAGIPA*WTPPPC
Trigger: GCACGGAGGAGGAGTCCAGCAAGCAGGAATCCCAGC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGTCCTCACGTTGCCTGTaGGGAAGCTGCTGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLSSRCL*GSCWSP
Trigger: GGGGGACCAGCAGCTTCCCCACAGGCAACGTGAGGA...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCCATGCGCTTCTCGATaGCTGCCAGGGACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRPCASR*LPGTPV
Trigger: CACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACCCATGCGCTTCTCGATaGCTGCCAGGGACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHPCASR*LPGTPV
Trigger: CACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGG...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGGCTCTCCTGCAAGGTaGTTGAGCCGCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSGSPAR*LSRGLA
Trigger: AGCAAGCCCGCGGCTCAACCACCTTGCAGGAGAGCC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCGGTGGAGGGTCGTGCTaGGCCATGAACACGCAGTTG +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLGGGSC*AMNTQL
Trigger: CAACTGCGTGTTCATGGCCCAGCACGACCCTCCACC...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGAGCAGTGATGTGTGGTaGCTCTCGCTCTCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVSSDVW*LSLSPA
Trigger: AGCGGGGGAGAGCGAGAGCCACCACACATCACTGCT...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGACCAGCAGTGATGTGTaGTGGCTCTCGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQTSSDV*WLSLSP
Trigger: GGGGGAGAGCGAGAGCCACCACACATCACTGCTGGT...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTGCTGTCCCTGGGCACTaGTCCGGCGCAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPAVPGH*SGAGAR
Trigger: CCTGGCCCCTGCGCCGGACCAGTGCCCAGGGACAGC...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGCTGTCCCTGGGCACTaGTCCGGCGCAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPAVPGH*SGAGAR
Trigger: CCTGGCCCCTGCGCCGGACCAGTGCCCAGGGACAGC...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGGACTGGGCTGTCCCTaGGCACTGGTCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTGLGCP*ALVRRR
Trigger: CCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCC...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGAGGAGGTGGCTTCCTaGGGATGTGGCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVEEVAS*GCGLWV
Trigger: GACCCAGAGGCCACATCCCCAGGAAGCCACCTCCTC...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCACATCTGGGGCCCGCCTaGCTCCTCCGATGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGAHLGPA*LLRWRG
Trigger: ACCACGCCATCGGAGGAGCCAGGCGGGCCCCAGATG...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGTCTACACACGGAGCCTaGGAGGTCAGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVSTHGA*EVSIWG
Trigger: GCCCCAGATGCTGACCTCCCAGGCTCCGTGTGTAGA...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTAAGCGCAGGCCCCTCTaGATGCGGGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCKRRPL*MRARAS
Trigger: GCTGGCCCTGGCCCGCATCCAGAGGGGCCTGCGCTT...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAATGCAGCTGGGCAGCTaGCCCTGGGCGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSMQLGS*PWAARA
Trigger: AGCCCTTGCCGCCCAGGGCCAGCTGCCCAGCTGCAT...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCGGGGGTGCCCTGGCCTaGTTGCTCGCCTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGGGALA*LLAFLK
Trigger: TTTGAGGAAGGCGAGCAACCAGGCCAGGGCACCCCC...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACACTCGGCCACAGCGATaGGCACACACACGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHTRPQR*AHTRAL
Trigger: CAGAGCCCGTGTGTGTGCCCATCGCTGTGGCCGAGT...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGACTCGGCCACAGCGATaGGCACACACACGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLTRPQR*AHTRAL
Trigger: CAGAGCCCGTGTGTGTGCCCATCGCTGTGGCCGAGT...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGACTCGGCCACAGCGATaGGCACACACACGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLTRPQR*AHTRAL
Trigger: CAGAGCCCGTGTGTGTGCCCATCGCTGTGGCCGAGT...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTCCACCAGACCTTCCCTaGGGCCTGTGTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVPPDLP*GLCGVH
Trigger: GTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGG...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGCCACCAGACCTTCCCTaGGGCCTGTGTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVPPDLP*GLCGVH
Trigger: GTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGG...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCCACCAGACCTTCCCTaGGGCCTGTGTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLPPDLP*GLCGVH
Trigger: GTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCCGAGGCTCACACGATaGACTCACGGTCCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLPRLTR*THGPCP
Trigger: CGGACAGGGACCGTGAGTCCATCGTGTGAGCCTCGG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTCCGAGGCTCACACGATaGACTCACGGTCCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSPRLTR*THGPCP
Trigger: CGGACAGGGACCGTGAGTCCATCGTGTGAGCCTCGG...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCCCACGGCCTGTGTCTaGCCTCCGTGTGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRPTACV*PPCVRT
Trigger: AGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCCCACGGCCTGTGTCTaGCCTCCGTGTGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLPTACV*PPCVRT
Trigger: AGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTCAAGAACCCCATCCTTaGGGGGCCGGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSQEPHP*GAGRER
Trigger: CCTTTCCCTGCCGGCCCCCCAAGGATGGGGTTCTTG...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CAA 72 bp CCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCCCATTTCTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: PAVHAAPQNSAW*IRGAEAHFLLP
Trigger: TGGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCAGGCGTTGGTGGCACTaGACCGGAAGATGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLRRWWH*TGRWSC
Trigger: GCAAGACCATCTTCCGGTTCAGTGCCACCAACGCCT...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGTGGGGTGGAAGGGACTaGGGACATACAAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVWGGRD*GHTRRW
Trigger: CCAACGCCTTGTATGTCCTCAGTCCCTTCCACCCCA...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCACCAGGGCACCAGCAGTaGTGTGTGGTGGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPPGHQQ*CVVALA
Trigger: AGCGAGAGCCACCACACATCACTGCTGGTGCCCTGG...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGATGATTTGGCCAGCTTaGAGACCCGCAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVMIWPA*RPAAGG
Trigger: TCCGCCTGCTGCGGGTCTTCAAGCTGGCCAAATCAT...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCCGGAGTGTGGTGGTaGTGGGCTCGTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVAGVWW*WARRRS
Trigger: AGATCTCCTACGAGCCCATCACCACCACACTCCGGC...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCC +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHVDPRG*GPFLTP
Trigger: GGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAAC...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCC +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSVDPRG*GPFLTP
Trigger: GGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAAC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTGTGTGCTTGTGTaGGTGGGGGTTCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSVCVLV*VGVQPS
Trigger: GGAGGGCTGAACCCCCACTCACACAAGCACACACAC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCAATAGGGGGCCAGAGTaGGCCCCGTGGACAAGAACC +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGNRGPE*APWTRT
Trigger: GGTTCTTGTCCACGGGGCTCACTCTGGCCCCCTATT...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCCGGGGGAGCGATCCCTaGATCCTACGGGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIRGSDP*ILRAPP
Trigger: CGGCGGCGCCCGTAGGATGCAGGGATCGCTCCCCCG...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGCGGGCTTGCTTCTCTaGCATGCGCTTCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRAGLLL*HALLDG
Trigger: GCCATCGAGAAGCGCATGGCAGAGAAGCAAGCCCGC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGAGGAAAGTGAACGCGTaGAGGCAGAAGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVRKVNA*RQKPRA
Trigger: GGCTCGAGGCTTCTGCCTGCACGCGTTCACTTTCCT...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAGTCGTGTCTGGCGGGTaGTCTAGCATCACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPVVSGG*SSITGR
Trigger: CCGCCCTGTGATGCTAGAGCACCCGCCAGACACGAC...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACGCAGCACCGACAAGTTaGTCATGCGGGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHAAPTS*SCGTGP
Trigger: TGGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGC...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGCAGGCCCCTCTGGATaGGGGCCAGGGCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPAGPSG*GPGPAG
Trigger: TCCAGCTGGCCCTGGCCCGCATCCAGAGGGGCCTGC...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGCAGGCCCCTCTGGATaGGGGCCAGGGCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLAGPSG*GPGPAG
Trigger: TCCAGCTGGCCCTGGCCCGCATCCAGAGGGGCCTGC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTGCCCTGGCCTGGTTaGTCGCCTTCCTCAAACCGT +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLVPWPG*SPSSNR
Trigger: ACGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCAC...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGGTGCCCTGGCCTGGTTaGTCGCCTTCCTCAAACCGT +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVVPWPG*SPSSNR
Trigger: ACGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCAC...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGTGCCCTGGCCTGGTTaGTCGCCTTCCTCAAACCGT +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVVPWPG*SPSSNR
Trigger: ACGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCAC...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGGGATTCCTGCTGCTTaGTGGACTCCTCCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLGIPAA*WTPPPC
Trigger: GCACGGAGGAGGAGTCCAGCAAGCAGCAGGAATCCC...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR GCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGTGTGGTAGCAGGTCTTaGGCAACCGCCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQCGSRS*ATATRP
Trigger: AGGTCTGGTGGCGGTTGCGCAAGACCTGCTACCACA...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGTTTACTCGCCGGCAATaGCCCCTTCAGCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGEFTRRQ*PLQHCH
Trigger: GTGGCAGTGCTGAAGGGGGCATTGCCGGCGAGTAAA...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGACCTGCGGAAGCTGCTaGTGCCCCGAGGTAATAGGA +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQTCGSC*CPEVIG
Trigger: TCCTATTACCTCGGGGCACCAGCAGCTTCCGCAGGT...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGCTCTCCGGATGGGGTaGAAGGGACTGAGGACATAC +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQALRMG*KGLRTY
Trigger: GTATGTCCTCAGTCCCTTCCACCCCATCCGGAGAGC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGCCCGCGGCTGGAACGTaGCTTCATAGAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVPAAGT*LHRSPA
Trigger: AGCAGGACTTCTATGAAGCCACGTTCCAGCCGCGGG...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTAGCAGTGATGTGTGGTaGCTCTCGCTCTCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSSSDVW*LSLSPA
Trigger: AGCGGGGGAGAGCGAGAGCCACCACACATCACTGCT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCACCAGCAGTGATGTGTaGTGGCTCTCGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGTSSDV*WLSLSP
Trigger: GGGGGAGAGCGAGAGCCACCACACATCACTGCTGGT...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGCTGTCCCTGGGCACTaGTCCGGCGCAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRAVPGH*SGAGAR
Trigger: CCTGGCCCCTGCGCCGGACCAGTGCCCAGGGACAGC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGCCGAGGTTCCGGGACTaGGCTGTCCCTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGPRFRD*AVPGHW
Trigger: CCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGG...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGCCGAGGTTCCGGGACTaGGCTGTCCCTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVPRFRD*AVPGHW
Trigger: CCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGG...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCCGAGGTTCCGGGACTaGGCTGTCCCTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCPRFRD*AVPGHW
Trigger: CCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAGCTCCTCCGATGGCGTaGTCGTGTCTGGCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGAAPPMA*SCLAGA
Trigger: AGCACCCGCCAGACACGACCACGCCATCGGAGGAGC...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGCTCCTCCGATGGCGTaGTCGTGTCTGGCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSAPPMA*SCLAGA
Trigger: AGCACCCGCCAGACACGACCACGCCATCGGAGGAGC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCGCCTGGCTCCTCCGATaGCGTGGTCGTGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPAWLLR*RGRVWR
Trigger: CCGCCAGACACGACCACGCCATCGGAGGAGCCAGGC...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCCTGGCTCCTCCGATaGCGTGGTCGTGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHAWLLR*RGRVWR
Trigger: CCGCCAGACACGACCACGCCATCGGAGGAGCCAGGC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCATCTGGGGCCCGCCTaGCTCCTCCGATGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRHLGPA*LLRWRG
Trigger: ACCACGCCATCGGAGGAGCCAGGCGGGCCCCAGATG...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCATCTGGGGCCCGCCTaGCTCCTCCGATGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTHLGPA*LLRWRG
Trigger: ACCACGCCATCGGAGGAGCCAGGCGGGCCCCAGATG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCTGGGAGGTCAGCATCTaGGGCCCGCCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSWEVSI*GPPGSS
Trigger: GGAGGAGCCAGGCGGGCCCCAGATGCTGACCTCCCA...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTGGGAGGTCAGCATCTaGGGCCCGCCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHWEVSI*GPPGSS
Trigger: GGAGGAGCCAGGCGGGCCCCAGATGCTGACCTCCCA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGTCTACACACGGAGCCTaGGAGGTCAGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLSTHGA*EVSIWG
Trigger: GCCCCAGATGCTGACCTCCCAGGCTCCGTGTGTAGA...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGTCTACACACGGAGCCTaGGAGGTCAGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLSTHGA*EVSIWG
Trigger: GCCCCAGATGCTGACCTCCCAGGCTCCGTGTGTAGA...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCGGGCCAGGGCCAGCTaGAGGTTGTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRRARAS*RLFISL
Trigger: CAGAGAGATGAACAACCTCCAGCTGGCCCTGGCCCG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAGCGCAGGCCCCTCTaGATGCGGGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTKRRPL*MRARAS
Trigger: GCTGGCCCTGGCCCGCATCCAGAGGGGCCTGCGCTT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAAAGCGCAGGCCCCTCTaGATGCGGGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPKRRPL*MRARAS
Trigger: GCTGGCCCTGGCCCGCATCCAGAGGGGCCTGCGCTT...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCAAGCGCAGGCCCCTCTaGATGCGGGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVKRRPL*MRARAS
Trigger: GCTGGCCCTGGCCCGCATCCAGAGGGGCCTGCGCTT...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGAAGCGCAGGCCCCTCTaGATGCGGGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRKRRPL*MRARAS
Trigger: GCTGGCCCTGGCCCGCATCCAGAGGGGCCTGCGCTT...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGATGCAGCTGGGCAGCTaGCCCTGGGCGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVMQLGS*PWAARA
Trigger: AGCCCTTGCCGCCCAGGGCCAGCTGCCCAGCTGCAT...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTATGCAGCTGGGCAGCTaGCCCTGGGCGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCMQLGS*PWAARA
Trigger: AGCCCTTGCCGCCCAGGGCCAGCTGCCCAGCTGCAT...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGCGGGGAGTAGGGGGTaGCAATGCAGCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSAGSRG*QCSWAA
Trigger: AGCTGCCCAGCTGCATTGCCACCCCCTACTCCCCGC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGATCCGGAGGGGCCTCTaGGCCACCGGACACAGGCTG +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGIRRGL*ATGHRL
Trigger: CAGCCTGTGTCCGGTGGCCCAGAGGCCCCTCCGGAT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGATCCGGAGGGGCCTCTaGGCCACCGGACACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLIRRGL*ATGHRL
Trigger: CAGCCTGTGTCCGGTGGCCCAGAGGCCCCTCCGGAT...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCCGCACCCTGGGGCCTaGGGTTCCGCTTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLPHPGA*GSAFHC
Trigger: GCAGTGGAAAGCGGAACCCCAGGCCCCAGGGTGCGG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACGGGTCCTTGACATCCTaGCCGAGGTCAGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHGSLTS*PRSGIC
Trigger: GCAGATCCCTGACCTCGGCCAGGATGTCAAGGACCC...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCACCGAGGCTCACACGATaGACTCACGGTCCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPPRLTR*THGPCP
Trigger: CGGACAGGGACCGTGAGTCCATCGTGTGAGCCTCGG...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCTTTTCAGTGTGTCCTaGCCAGCCAGGCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRLFSVS*PARPRL
Trigger: GAGCCTCGGCCTGGCTGGCCAGGACACACTGAAAAG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTCTTTTCAGTGTGTCCTaGCCAGCCAGGCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVLFSVS*PARPRL
Trigger: GAGCCTCGGCCTGGCTGGCCAGGACACACTGAAAAG...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTGCTTGTGTGAGTaGGGGTTCAGCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSVCLCE*GFSPPS
Trigger: GCTGGGAGGGCTGAACCCCCACTCACACAAGCACAC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCGTGTGCTTGTGTGAGTaGGGGTTCAGCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGVCLCE*GFSPPS
Trigger: GCTGGGAGGGCTGAACCCCCACTCACACAAGCACAC...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGATGCCAGGCCGTGAATaGGGCTTGCACCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVMPGRE*GLHPCV
Trigger: GACACAAGGGTGCAAGCCCCATTCACGGCCTGGCAT...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCACTCTCTTCCGATGGCTaGCTGGGCAGGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSLSSDG*LGRACQ
Trigger: CTGGCAGGCCCTGCCCAGCCAGCCATCGGAAGAGAG...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGAGCCCCAAACCCCCATaGCTCAGCCCTCTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVSPKPP*LSPLFR
Trigger: TCGGAAGAGAGGGCTGAGCCATGGGGGTTTGGGGCT...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTAGCCCCAAACCCCCATaGCTCAGCCCTCTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSSPKPP*LSPLFR
Trigger: TCGGAAGAGAGGGCTGAGCCATGGGGGTTTGGGGCT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGAGGCATGCGCCCGGTaGAGGGGCTCCATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGEACAR*RGSMGE
Trigger: CTCTCCCATGGAGCCCCTCCACCGGGCGCATGCCTC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGAGACTGAGGTGGCCTaGGAGGCATGCGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGETEVA*EACARW
Trigger: CCACCGGGCGCATGCCTCCCAGGCCACCTCAGTCTC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCCCAGGGACTCCCGTGTaGACCTGCGGAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPPGTPV*TCGSCW
Trigger: CCAGCAGCTTCCGCAGGTTCACACGGGAGTCCCTGG...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCACCAGGGGCTCTCCGATaGGCTCTTGGGGTGGATTGC +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSPGALR*ALGVDC
Trigger: GCAATCCACCCCAAGAGCTCATCGGAGAGCCCCTGG...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCACCAGGGGCTCTCCGATaGGCTCTTGGGGTGGATTGC +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGAPGALR*ALGVDC
Trigger: GCAATCCACCCCAAGAGCTCATCGGAGAGCCCCTGG...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGCGTTGGTGGCACTaGACCGGAAGATGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHRRWWH*TGRWSC
Trigger: GCAAGACCATCTTCCGGTTCAGTGCCACCAACGCCT...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTACTTCACTCCCTGCTTaGTGGACATCCACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSTSLPA*WTSTAG
Trigger: GCCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGACTTCACTCCCTGCTTaGTGGACATCCACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLTSLPA*WTSTAG
Trigger: GCCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGT...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGCGAGGCAGCAGGCCTaGGTCGCTGTCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRARQQA*VAVPQL
Trigger: GAGCTGAGGGACAGCGACTCAGGCCTGCTGCCTCGC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGTTGGTCATCTGTGTCTaGCTCGGCCACAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVLVICV*LGHSDG
Trigger: CCCATCGCTGTGGCCGAGTCAGACACAGATGACCAA...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCTTGGTCATCTGTGTCTaGCTCGGCCACAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGLVICV*LGHSDG
Trigger: CCCATCGCTGTGGCCGAGTCAGACACAGATGACCAA...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACTTGGTCATCTGTGTCTaGCTCGGCCACAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHLVICV*LGHSDG
Trigger: CCCATCGCTGTGGCCGAGTCAGACACAGATGACCAA...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGTTGGTCATCTGTGTCTaGCTCGGCCACAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLLVICV*LGHSDG
Trigger: CCCATCGCTGTGGCCGAGTCAGACACAGATGACCAA...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTGCCGCCAGTCGGCCTaGGATGCACTGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSCRQSA*DALASA
Trigger: GGCCGAGGCCAGTGCATCTCAGGCCGACTGGCGGCA...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCCGCTGCCCGCCTGCTaGCGGAAGAGGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLPLPAC*RKRKEA
Trigger: TGCCTCCTTCCTCTTCCGTCAGCAGGCGGGCAGCGG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTCCGCTGCCCGCCTGCTaGCGGAAGAGGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPPLPAC*RKRKEA
Trigger: TGCCTCCTTCCTCTTCCGTCAGCAGGCGGGCAGCGG...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACCCTCAGCAGCTGGGATaGAGTTGCTTTCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHPQQLG*SCFPEP
Trigger: CGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGG...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGTCTCTTCAGGCAGGCTaGGGGGCCGCCATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRSLQAG*GAAMAQ
Trigger: CTGAGCCATGGCGGCCCCTCAGCCTGCCTGAAGAGA...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAATCAGGATCCCGGGCTaGGCCAGAGAGGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPIRIPG*AREAGP
Trigger: AGGCCCAGCCTCTCTGGCTCAGCCCGGGATCCTGAT...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCTGTGTAGCAGGCGGTaGGCACCCAGGAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLLCSRR*APRRGT
Trigger: TGTGCCCCTCCTGGGTGCTCACCGCCTGCTACACAG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAGGGGTGGGCGGCTGCTaGTTGGCGCGGACTCGGCTC +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGGVGGC*LARTRL
Trigger: GAGCCGAGTCCGCGCCAAGCAGCAGCCGCCCACCCC...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAGGGGTGGGCGGCTGCTaGTTGGCGCGGACTCGGCTC +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGGVGGC*LARTRL
Trigger: GAGCCGAGTCCGCGCCAAGCAGCAGCCGCCCACCCC...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGTGCGGAAGCTGCTGGTaGCCCGAGGTAATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQCGSCW*PEVIGS
Trigger: ACTTCCTATTACCTCGGGGCACCAGCAGCTTCCGCA...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGAGGAAAGTGAACGCGTaGAGGCAGAAGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVRKVNA*RQKPRA
Trigger: GGCTCGAGGCTTCTGCCTGCACGCGTTCACTTTCCT...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGGTGAGGACGCTGACTaGGCTGAGGGCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRGEDAD*AEGPLP
Trigger: CGGCAGCGGGCCCTCAGCGCAGTCAGCGTCCTCACC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAAGAAGTCCATCATGTaGCAGCGAGGCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQKKSIM*QRGSRP
Trigger: AGGCCTGCTGCCTCGCTGGCACATGATGGACTTCTT...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCACAAACCGTGTTTCCTTaGGGGTGGGAGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SPPTARRGRLGAASPEPAQTVFP*GWEAPS
Trigger: AGAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTG...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCTGGATCCCCGGGGGTaGCCTGGCCTGGTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGLDPRG*PGLVAR
Trigger: GCGAGCAACCAGGCCAGGGCACCCCCGGGGATCCAG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCTGGATCCCCGGGGGTaGCCTGGCCTGGTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRLDPRG*PGLVAR
Trigger: GCGAGCAACCAGGCCAGGGCACCCCCGGGGATCCAG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQWSCLL*CPRSNC
Trigger: ACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCA...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCGGTGTTGGTCATGTCTaGTGTGCTGCCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGGVGHV*CAALGA
Trigger: TGCTCCGAGGGCAGCACAGCAGACATGACCAACACC...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGGTGTTGGTCATGTCTaGTGTGCTGCCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLGVGHV*CAALGA
Trigger: TGCTCCGAGGGCAGCACAGCAGACATGACCAACACC...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCTGTGGTAGCAGGTCTTaGGCAACCGCCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGCGSRS*ATATRP
Trigger: AGGTCTGGTGGCGGTTGCGCAAGACCTGCTACCACA...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTGTGGTAGCAGGTCTTaGGCAACCGCCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVCGSRS*ATATRP
Trigger: AGGTCTGGTGGCGGTTGCGCAAGACCTGCTACCACA...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACCTTCGGAGAGGCCGCTaGCCGCCTGCTGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHLRRGR*PPADGR
Trigger: TCTTCCGTCAGCAGGCGGGCAGCGGCCTCTCCGAAG...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCCAAGCACAGGCCAACTaGTCCGGCTGTCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSQAQAN*SGCPRG
Trigger: GCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCACAAGCACAGGCCAACTaGTCCGGCTGTCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPQAQAN*SGCPRG
Trigger: GCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGCAAGGACAAGCTGCATaGCAGGCCGTGAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLQGQAA*QAVNGA
Trigger: AGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTG...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCAAGGACAAGCTGCATaGCAGGCCGTGAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLQGQAA*QAVNGA
Trigger: AGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGGGAGCAAGGACAAGCTaGATGCCAGGCCGTGAATGG +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVGARTS*MPGREW
Trigger: CCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCC...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCGGAGCAAGGACAAGCTaGATGCCAGGCCGTGAATGG +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGGARTS*MPGREW
Trigger: CCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCC...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCTGGCTGGGCAGGGCCTaGCAGGTTCCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSWLGRA*QVPGAR
Trigger: CCTTGCTCCTGGAACCTGGCAGGCCCTGCCCAGCCA...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCTGGCTGGGCAGGGCCTaGCAGGTTCCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPWLGRA*QVPGAR
Trigger: CCTTGCTCCTGGAACCTGGCAGGCCCTGCCCAGCCA...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGACCATCCCTTTCCCTaGACAGGGCGCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSDHPFP*TGRRAK
Trigger: CTTGGCCCTGCGCCCTGTGCAGGGAAAGGGATGGTC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGCTGGCAGCCCGACCTaGCTCCCAACCGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCAGSPT*LPTAFL
Trigger: CAGGAATGCGGTTGGGAGGCAGGTCGGGCTGCCAGC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCCCAACCACACCGTCTaGAGCCAGCCCCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRPNHTV*SQPQAP
Trigger: AGGTGCCTGGGGCTGGCTGCAGACGGTGTGGTTGGG...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGTGCTCTTCATACACCTaGAGAAGGGCCAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGECSSYT*RRARYP
Trigger: CGGGTACCTGGCCCTTCTGCAGGTGTATGAAGAGCA...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414099.6
CDS-3UTR CCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGACCTGCGGAAGCTGCTaGTGCCCCGAGGTAATAGGA +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVTCGSC*CPEVIG
Trigger: TCCTATTACCTCGGGGCACCAGCAGCTTCCGCAGGT...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGACCTGCGGAAGCTGCTaGTGCCCCGAGGTAATAGGA +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVTCGSC*CPEVIG
Trigger: TCCTATTACCTCGGGGCACCAGCAGCTTCCGCAGGT...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCCTCGGTCTCAGCGATaGTGGCTTGGTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQPRSQR*WLGFAP
Trigger: AGGAGCAAAACCAAGCCACCATCGCTGAGACCGAGG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCTTCTGAGTCAGACTTaGGGAGCCTGTCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLLLSQT*GACPPH
Trigger: GTGGGGAGGACAGGCTCCCCAAGTCTGACTCAGAAG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTCTTCTGAGTCAGACTTaGGGAGCCTGTCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSLLSQT*GACPPH
Trigger: GTGGGGAGGACAGGCTCCCCAAGTCTGACTCAGAAG...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCCCCGCGGCTGGAACGTaGCTTCATAGAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGPAAGT*LHRSPA
Trigger: AGCAGGACTTCTATGAAGCCACGTTCCAGCCGCGGG...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGGACTGGGCTGTCCCTaGGCACTGGTCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSGLGCP*ALVRRR
Trigger: CCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACCGAGGTTCCGGGACTaGGCTGTCCCTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPPRFRD*AVPGHW
Trigger: CCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGTTGCCATGGAGGGCGTaGCCAGGAGCCGAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTLPWRA*PGAEVP
Trigger: CGGAACCTCGGCTCCTGGCCACGCCCTCCATGGCAA...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTCTGTTCTTTTTGCCATaGAGGGCGTGGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSLFFLP*RAWPGA
Trigger: GGCTCCTGGCCACGCCCTCCATGGCAAAAAGAACAG...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCGCTCCTCCGATGGCGTaGTCGTGTCTGGCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPAPPMA*SCLAGA
Trigger: AGCACCCGCCAGACACGACCACGCCATCGGAGGAGC...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCGCCTGGCTCCTCCGATaGCGTGGTCGTGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVAWLLR*RGRVWR
Trigger: CCGCCAGACACGACCACGCCATCGGAGGAGCCAGGC...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTGGGAGGTCAGCATCTaGGGCCCGCCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVWEVSI*GPPGSS
Trigger: GGAGGAGCCAGGCGGGCCCCAGATGCTGACCTCCCA...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGATGCAGCTGGGCAGCTaGCCCTGGGCGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRMQLGS*PWAARA
Trigger: AGCCCTTGCCGCCCAGGGCCAGCTGCCCAGCTGCAT...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGCGGGGAGTAGGGGGTaGCAATGCAGCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCAGSRG*QCSWAA
Trigger: AGCTGCCCAGCTGCATTGCCACCCCCTACTCCCCGC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGCGGGGAGTAGGGGGTaGCAATGCAGCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRAGSRG*QCSWAA
Trigger: AGCTGCCCAGCTGCATTGCCACCCCCTACTCCCCGC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCACCTTCTCCGTCTCTaGGGGTGGCGGGGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTHLLRL*GWRGVG
Trigger: CCCTACTCCCCGCCACCCCCAGAGACGGAGAAGGTG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCCACCTTCTCCGTCTCTaGGGGTGGCGGGGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSHLLRL*GWRGVG
Trigger: CCCTACTCCCCGCCACCCCCAGAGACGGAGAAGGTG...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTCACACACACGGGCTCTaGATCCCCGGGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPHTHGL*IPGGAL
Trigger: CAGGGCACCCCCGGGGATCCAGAGCCCGTGTGTGTG...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGCACACACACGGGCTCTaGATCCCCGGGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRHTHGL*IPGGAL
Trigger: CAGGGCACCCCCGGGGATCCAGAGCCCGTGTGTGTG...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCCTGGCTCCAGGTCCTaGAATCCGGAGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLPGSRS*NPEGPL
Trigger: CAGAGGCCCCTCCGGATTCCAGGACCTGGAGCCAGG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGCGGCCTGAGATGCACTaGCCTCGGCCTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVRPEMH*PRPQRR
Trigger: CCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCG...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGCCGCACCCTGGGGCCTaGGGTTCCGCTTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRPHPGA*GSAFHC
Trigger: GCAGTGGAAAGCGGAACCCCAGGCCCCAGGGTGCGG...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGGTCTCACCGCACCCTaGGGCCTGGGGTTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCGLTAP*GLGFRF
Trigger: AAAGCGGAACCCCAGGCCCCAGGGTGCGGTGAGACC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGGGTCTCACCGCACCCTaGGGCCTGGGGTTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVGLTAP*GLGFRF
Trigger: AAAGCGGAACCCCAGGCCCCAGGGTGCGGTGAGACC...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGGAGGAGCTGGAGGGTaGGCCAAGGGGTCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRGGAGG*AKGSGE
Trigger: TTCTCCCGACCCCTTGGCCCACCCTCCAGCTCCTCC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGGGAGGAGCTGGAGGGTaGGCCAAGGGGTCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVGGAGG*AKGSGE
Trigger: TTCTCCCGACCCCTTGGCCCACCCTCCAGCTCCTCC...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCGGAGGAGCTGGAGGGTaGGCCAAGGGGTCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSGGAGG*AKGSGE
Trigger: TTCTCCCGACCCCTTGGCCCACCCTCCAGCTCCTCC...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCTCCCTTAGGCTaGGAGCCTGGGTCCCACGGC +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRLSPLG*EPGSHG
Trigger: GCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCTGTCTCCCTTAGGCTaGGAGCCTGGGTCCCACGGC +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCLSPLG*EPGSHG
Trigger: GCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACCTGTCTCCCTTAGGCTaGGAGCCTGGGTCCCACGGC +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHLSPLG*EPGSHG
Trigger: GCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGCTCTCTTCCGATGGCTaGCTGGGCAGGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGLSSDG*LGRACQ
Trigger: CTGGCAGGCCCTGCCCAGCCAGCCATCGGAAGAGAG...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGAGCCCTCTCTTCCGATaGCTGGCTGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVSPLFR*LAGQGL
Trigger: CAGGCCCTGCCCAGCCAGCCATCGGAAGAGAGGGCT...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGAGCCCTCTCTTCCGATaGCTGGCTGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLSPLFR*LAGQGL
Trigger: CAGGCCCTGCCCAGCCAGCCATCGGAAGAGAGGGCT...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGTGGTCCAGAGAGCCCTaGGAGATCGCCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVWSREP*EIASFL
Trigger: GAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCA...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGAGACTGAGGTGGCCTaGGAGGCATGCGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPETEVA*EACARW
Trigger: CCACCGGGCGCATGCCTCCCAGGCCACCTCAGTCTC...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCAGGTGAGACTGAGGTaGCCTGGGAGGCATGCGCCC +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCQVRLR*PGRHAP
Trigger: GGGCGCATGCCTCCCAGGCCACCTCAGTCTCACCTG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCCAGGGACTCCCGTGTaGACCTGCGGAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLPGTPV*TCGSCW
Trigger: CCAGCAGCTTCCGCAGGTTCACACGGGAGTCCCTGG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGCCAGGGGCTCTCCGATaGGCTCTTGGGGTGGATTGC +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVPGALR*ALGVDC
Trigger: GCAATCCACCCCAAGAGCTCATCGGAGAGCCCCTGG...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGGGTGGAAGGGACTaGGGACATACAAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPWGGRD*GHTRRW
Trigger: CCAACGCCTTGTATGTCCTCAGTCCCTTCCACCCCA...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTTCTGGGACCATCTTCTaGGTCAGACTTGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSSGTIF*VRLGEP
Trigger: AGGCTCCCCAAGTCTGACTCAGAAGATGGTCCCAGA...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGTCTGGGACCATCTTCTaGGTCAGACTTGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVSGTIF*VRLGEP
Trigger: AGGCTCCCCAAGTCTGACTCAGAAGATGGTCCCAGA...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGCCAGGGCACCAGCAGTaGTGTGTGGTGGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGPGHQQ*CVVALA
Trigger: AGCGAGAGCCACCACACATCACTGCTGGTGCCCTGG...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGCGAGGCAGCAGGCCTaGGTCGCTGTCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSARQQA*VAVPQL
Trigger: GAGCTGAGGGACAGCGACTCAGGCCTGCTGCCTCGC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGCCCAGGTGGTCCGCTTaGCAAAGCGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRPRWSA*QSAGPS
Trigger: AGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGG...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACCCAGGTGGTCCGCTTaGCAAAGCGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPPRWSA*QSAGPS
Trigger: AGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGCGTCCGCAGTGACTTaGTGGGGCCCATCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLASAVT*WGPSRQ
Trigger: TTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGACGCAGCGTCCGCAGTaGCTTGATGGGGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVTQRPQ*LDGAHL
Trigger: GAGATGGGCCCCATCAAGTCACTGCGGACGCTGCGT...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACGCAGCGTCCGCAGTaGCTTGATGGGGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSTQRPQ*LDGAHL
Trigger: GAGATGGGCCCCATCAAGTCACTGCGGACGCTGCGT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGCATGCCCTCAAATCGTaGCAGAGCTCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVHALKS*QSSQRT
Trigger: CGTCCTCTGAGAGCTCTGTCACGATTTGAGGGCATG...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCATGCCCTCAAATCGTaGCAGAGCTCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLHALKS*QSSQRT
Trigger: CGTCCTCTGAGAGCTCTGTCACGATTTGAGGGCATG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGCATGCCCTCAAATCGTaGCAGAGCTCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVHALKS*QSSQRT
Trigger: CGTCCTCTGAGAGCTCTGTCACGATTTGAGGGCATG...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCCTCCCTCTGTCTGGTTaGTGCACCTCCCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGLPLSG*CTSQTS
Trigger: GGAAGTTTGGGAGGTGCATCAACCAGACAGAGGGAG...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGCTCCCTCTGTCTGGTTaGTGCACCTCCCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVLPLSG*CTSQTS
Trigger: GGAAGTTTGGGAGGTGCATCAACCAGACAGAGGGAG...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGAGGTTGTATTCCCACTaGGGCTGCTCTTCATACCCC +
Preference number: 4 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVRLYSH*GCSSYP
Trigger: GGGGTATGAAGAGCAGCCTCAGTGGGAATACAACCT...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCTGCCAGCCTCCCACTTaGCATAAGCGAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGCQPPT*HKRSWP
Trigger: TGGCCAACTTCGCTTATGTCAAGTGGGAGGCTGGCA...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACTGCCAGCCTCCCACTTaGCATAAGCGAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHCQPPT*HKRSWP
Trigger: TGGCCAACTTCGCTTATGTCAAGTGGGAGGCTGGCA...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCCGCTGCCCGCCTGCTaGCGGAAGAGGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRPLPAC*RKRKEA
Trigger: TGCCTCCTTCCTCTTCCGTCAGCAGGCGGGCAGCGG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGTCATCACGTAGGCGATaGGGCCCTCTCGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAESSRRR*GPLAQG
Trigger: CCCCTGAGCGAGAGGGCCTCATCGCCTACGTGATGA...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCTGCATGCCAGGCCGTaGATGGGGCTTGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLLHARP*MGLAPL
Trigger: CAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTCTCTTCAGGCAGGCTaGGGGGCCGCCATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVSLQAG*GAAMAQ
Trigger: CTGAGCCATGGCGGCCCCTCAGCCTGCCTGAAGAGA...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTTCTCTTCAGGCAGGCTaGGGGGCCGCCATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLSLQAG*GAAMAQ
Trigger: CTGAGCCATGGCGGCCCCTCAGCCTGCCTGAAGAGA...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCTTGCTTCTCTGCCATaGGCTTCTCGATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLLASLP*ASRWLP
Trigger: TGGCAGCCATCGAGAAGCGCATGGCAGAGAAGCAAG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGCTTGCTTCTCTGCCATaGGCTTCTCGATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLLASLP*ASRWLP
Trigger: TGGCAGCCATCGAGAAGCGCATGGCAGAGAAGCAAG...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGCTCTTGGGGTGGATTaGCATAGAGATCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPPTARRGRLGAASPEPAALGVD*HRDLAA
Trigger: AGCTGCCAGATCTCTATGGCAATCCACCCCAAGAGC...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCATCAGGCGGAAGAGTaGAAGAAAGGCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQHQAEE*KKGPGK
Trigger: TTTGCCTGGGCCTTTCTTGCACTCTTCCGCCTGATG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCGCTCTCCCCCGCTGTaGTGTTTTCATCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQRSPPL*CFHHLQ
Trigger: TTGCAGATGATGAAAACAGCACAGCGGGGGAGAGCG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGAGGGCCCGCTGCCGTaGTCCTGGCTCCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFEGPLP*SWLLEA
Trigger: GGCTTCGAGGAGCCAGGAGCACGGCAGCGGGCCCTC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAGAGGGCCCGCTGCCGTaGTCCTGGCTCCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGEGPLP*SWLLEA
Trigger: GGCTTCGAGGAGCCAGGAGCACGGCAGCGGGCCCTC...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGCAGCACCGACAAGTTaGTCATGCGGGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSAAPTS*SCGTGP
Trigger: TGGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTAAGAAGTCCATCATGTaGCAGCGAGGCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSKKSIM*QRGSRP
Trigger: AGGCCTGCTGCCTCGCTGGCACATGATGGACTTCTT...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTAGCAGGCATAATGACTaGCCCGACACCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVSRHND*PDTSMQ
Trigger: CTGCATGGAGGTGTCGGGGCAGTCATTATGCCTGCT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGCAGGCCCCTCTGGATaGGGGCCAGGGCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFAGPSG*GPGPAG
Trigger: TCCAGCTGGCCCTGGCCCGCATCCAGAGGGGCCTGC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCCAGTCGGCCTGAGATaGACTGGCCTCGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCPVGLR*TGLGLR
Trigger: TCTGAGGCCGAGGCCAGTGCATCTCAGGCCGACTGG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCATGTCTGCTGTGCTaGCCTCGGAGCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVSCLLC*PRSNCP
Trigger: AGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGA...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLWSCLL*CPRSNC
Trigger: ACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCA...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSWSCLL*CPRSNC
Trigger: ACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCA...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGCCGAGGTCAGGGATCTaGTCCAGGAGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEPRSGI*SRSSAV
Trigger: CACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGG...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCCGAGGTCAGGGATCTaGTCCAGGAGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTPRSGI*SRSSAV
Trigger: CACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGTGTCCATGCAATGGATaGGGTCCCCACTCACCATGG +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLCPCNG*GPHSPW
Trigger: CCATGGTGAGTGGGGACCGCATCCATTGCATGGACA...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCGGCGCCACAGAACTCTaGCTGGTTGATCCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVGATEL*LVDPRG
Trigger: GCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTAAAGGCAACTATCAGTaGCTAGGGCCAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVKGNYQ*LGPALG
Trigger: TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCAAAGGCAACTATCAGTaGCTAGGGCCAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRKGNYQ*LGPALG
Trigger: TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTGCCGTGAATGGGGCTTaGACCCTTGTGTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSAVNGA*TLVSFG
Trigger: ACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGC...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGGGTCCTCTGTGTGGGTaGCATCAGGATCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVGPLCG*HQDPGL
Trigger: CAGCCCGGGATCCTGATGGCACCCACACAGAGGACC...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGGGACCACCTGGATCTTaGCCCAAAGAGGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVGPPGS*PKEVLC
Trigger: ACAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCC...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCTTCTCATCCTGCTTCTaGGCACAGGCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRFSSCF*AQALLT
Trigger: CGTGAGGAGAGCCTGTGCCCAGAAGCAGGATGAGAA...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
CDS-3UTR CCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGCCATGCGCTTCTCGATaGCTGCCAGGGACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEPCASR*LPGTPV
Trigger: CACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGG...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGGCTCTCCTGCAAGGTaGTTGAGCCGCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCGSPAR*LSRGLA
Trigger: AGCAAGCCCGCGGCTCAACCACCTTGCAGGAGAGCC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGGTGGAGGGTCGTGCTaGGCCATGAACACGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSGGGSC*AMNTQL
Trigger: CAACTGCGTGTTCATGGCCCAGCACGACCCTCCACC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCGGTCTCAGCGATGGTaGCTTGGTTTTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQRSQRW*LGFAPH
Trigger: ATGAGGAGCAAAACCAAGCCACCATCGCTGAGACCG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGCCTCGGTCTCAGCGATaGTGGCTTGGTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVPRSQR*WLGFAP
Trigger: AGGAGCAAAACCAAGCCACCATCGCTGAGACCGAGG...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCGAGGAGGTGGCTTCCTaGGGATGTGGCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSEEVAS*GCGLWV
Trigger: GACCCAGAGGCCACATCCCCAGGAAGCCACCTCCTC...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGACGGTTCCAGCATGGTaGACACTTGTGGCGAGACTC +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVTVPAW*TLVARL
Trigger: GAGTCTCGCCACAAGTGTCCACCATGCTGGAACCGT...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGGAGACGGTTCCAGCATaGTGGACACTTGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVETVPA*WTLVAR
Trigger: TCTCGCCACAAGTGTCCACCATGCTGGAACCGTCTC...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGGGGGTGCCCTGGCCTaGTTGCTCGCCTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLGGALA*LLAFLK
Trigger: TTTGAGGAAGGCGAGCAACCAGGCCAGGGCACCCCC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGGGGGTGCCCTGGCCTaGTTGCTCGCCTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGGGALA*LLAFLK
Trigger: TTTGAGGAAGGCGAGCAACCAGGCCAGGGCACCCCC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCGGGGGTGCCCTGGCCTaGTTGCTCGCCTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSGGALA*LLAFLK
Trigger: TTTGAGGAAGGCGAGCAACCAGGCCAGGGCACCCCC...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTTCCCCGGGGGTGCCCTaGCCTGGTTGCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFSPGVP*PGCSPS
Trigger: GGAAGGCGAGCAACCAGGCCAGGGCACCCCCGGGGA...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGATCCCCGGGGGTGCCCTaGCCTGGTTGCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGSPGVP*PGCSPS
Trigger: GGAAGGCGAGCAACCAGGCCAGGGCACCCCCGGGGA...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCACTCGGCCACAGCGATaGGCACACACACGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPTRPQR*AHTRAL
Trigger: CAGAGCCCGTGTGTGTGCCCATCGCTGTGGCCGAGT...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGACTCGGCCACAGCGATaGGCACACACACGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAETRPQR*AHTRAL
Trigger: CAGAGCCCGTGTGTGTGCCCATCGCTGTGGCCGAGT...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAGCAGTCGCTGACACCTaGCTCCAGGTCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGAAVADT*LQVLES
Trigger: GGATTCCAGGACCTGGAGCCAGGTGTCAGCGACTGC...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTCGGCCTGAGATGCACTaGCCTCGGCCTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPRPEMH*PRPQRR
Trigger: CCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCG...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACGGCCTGAGATGCACTaGCCTCGGCCTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPRPEMH*PRPQRR
Trigger: CCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGGTCTCACCGCACCCTaGGGCCTGGGGTTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTGLTAP*GLGFRF
Trigger: AAAGCGGAACCCCAGGCCCCAGGGTGCGGTGAGACC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGGGAGCAACTGTCCTCTaGGGTCTCACCGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEGATVL*GLTAPW
Trigger: CCAGGGTGCGGTGAGACCCCAGAGGACAGTTGCTCC...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGGAGCAACTGTCCTCTaGGGTCTCACCGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRGATVL*GLTAPW
Trigger: CCAGGGTGCGGTGAGACCCCAGAGGACAGTTGCTCC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCAGTGAAGCAGTCCTCTaGGTCCTTGACATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRSEAVL*VLDILA
Trigger: GGCCAGGATGTCAAGGACCCAGAGGACTGCTTCACT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCAGAATGTCCATGCAATaGATGCGGTCCCCACTCACC +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLRMSMQ*MRSPLT
Trigger: GGTGAGTGGGGACCGCATCCATTGCATGGACATTCT...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCACTGCGGAAGGCTCTCTaGATAACCATGGCCGACACC +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPLRKAL*ITMADT
Trigger: GGTGTCGGCCATGGTTATCCAGAGAGCCTTCCGCAG...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGGAGGAGCTGGAGGGTaGGCCAAGGGGTCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTGGAGG*AKGSGE
Trigger: TTCTCCCGACCCCTTGGCCCACCCTCCAGCTCCTCC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGAGGAGATGGAGGAGCTaGAGGGTGGGCCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAERRWRS*RVGQGV
Trigger: GACCCCTTGGCCCACCCTCCAGCTCCTCCATCTCCT...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGAGGAGATGGAGGAGCTaGAGGGTGGGCCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTRRWRS*RVGQGV
Trigger: GACCCCTTGGCCCACCCTCCAGCTCCTCCATCTCCT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCCGAGGCTCACACGATaGACTCACGGTCCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRPRLTR*THGPCP
Trigger: CGGACAGGGACCGTGAGTCCATCGTGTGAGCCTCGG...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCCGAGGCTCACACGATaGACTCACGGTCCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLPRLTR*THGPCP
Trigger: CGGACAGGGACCGTGAGTCCATCGTGTGAGCCTCGG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTCTCTCTTCCGATGGCTaGCTGGGCAGGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPLSSDG*LGRACQ
Trigger: CTGGCAGGCCCTGCCCAGCCAGCCATCGGAAGAGAG...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCTCCTTCCGGCCAGCTaGGCTGGCAGCCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFLLPAS*AGSPTC
Trigger: GCAGGTCGGGCTGCCAGCCCAGCTGGCCGGAAGGAG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACTCCTGCAAGGTGGTTaGGCCGCGGGCTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPLLQGG*AAGLLL
Trigger: GAGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCCAGGGGCTCTCCGATaGGCTCTTGGGGTGGATTGC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVPGALR*ALGVDC
Trigger: GCAATCCACCCCAAGAGCTCATCGGAGAGCCCCTGG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCCTCGAGCCAGAATCTTaGCCAGAGACTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLLEPES*PETQRC
Trigger: ACACCTTTGAGTCTCTGGTCAAGATTCTGGCTCGAG...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGGTCCCGAAGGAAAGTaGACGCGTGCAGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLGPEGK*TRAGRS
Trigger: GCTTCTGCCTGCACGCGTTCACTTTCCTTCGGGACC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCTTCCCTGCGGACCTaGGGGTCTGCTGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVSSLRT*GSADRG
Trigger: GCCTCTATCAGCAGACCCTCAGGTCCGCAGGGAAGA...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGTCTTCCCTGCGGACCTaGGGGTCTGCTGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAESSLRT*GSADRG
Trigger: GCCTCTATCAGCAGACCCTCAGGTCCGCAGGGAAGA...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCTCGCCTGCGAAAGGTaGAAATGCTCCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVLACER*KCSRGW
Trigger: CCAGCCGCGGGAGCATTTTCACCTTTCGCAGGCGAG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGCTCGCCTGCGAAAGGTaGAAATGCTCCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRLACER*KCSRGW
Trigger: CCAGCCGCGGGAGCATTTTCACCTTTCGCAGGCGAG...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCCCAGGTGGTCCGCTTaGCAAAGCGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGPRWSA*QSAGPS
Trigger: AGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCCCAGGTGGTCCGCTTaGCAAAGCGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSPRWSA*QSAGPS
Trigger: AGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAAGAGGAGGCAGTCGCTaGCACCTGGCTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPRGGSR*HLAPGP
Trigger: AGGACCTGGAGCCAGGTGTCAGCGACTGCCTCCTCT...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAACTCAAGCAGAACCTTaGTGGTCTTCCGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SPPTARRGRLGAASPEPATQAEP*WSSAPL
Trigger: TAGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGT...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGCGTCCGCAGTGACTTaGTGGGGCCCATCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRASAVT*WGPSRQ
Trigger: TTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCAGGTTGTATTCCCACTaGGGCTGCTCTTCATACCCC +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGRLYSH*GCSSYP
Trigger: GGGGTATGAAGAGCAGCCTCAGTGGGAATACAACCT...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACTATTCCAGCTGTTGGTaGAGTAGTAGTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHYSSCW*SSSGAG
Trigger: CCCTGCGCCACTACTACTTCACCAACAGCTGGAATA...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
CDS-3UTR TCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCTATTCCAGCTGTTGGTaGAGTAGTAGTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGYSSCW*SSSGAG
Trigger: CCCTGCGCCACTACTACTTCACCAACAGCTGGAATA...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCCAGGACCCTTTTGGTaGAGGCAAAGAGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQPGPFW*RQRECP
Trigger: TGGACATTCTCTTTGCCTTCACCAAAAGGGTCCTGG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCGCCGGAGTGTGGTGGTaGTGGGCTCGTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPAGVWW*WARRRS
Trigger: AGATCTCCTACGAGCCCATCACCACCACACTCCGGC...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGGCCGGAGTGTGGTGGTaGTGGGCTCGTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVAGVWW*WARRRS
Trigger: AGATCTCCTACGAGCCCATCACCACCACACTCCGGC...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCTCATCACGTAGGCGATaGGGCCCTCTCGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTSSRRR*GPLAQG
Trigger: CCCCTGAGCGAGAGGGCCTCATCGCCTACGTGATGA...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCC +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCVDPRG*GPFLTP
Trigger: GGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAAC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGTTGATCCGCGGGGCTaGGGCCCATTTCTTACTCCC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLVDPRG*GPFLTP
Trigger: GGGAGTAAGAAATGGGCCTCAGCCCCGCGGATCAAC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGTGTGTGTGCTTGTGTaGGTGGGGGTTCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLVCVLV*VGVQPS
Trigger: GGAGGGCTGAACCCCCACTCACACAAGCACACACAC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCTGTGTAGCAGGCGGTaGGCACCCAGGAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGLCSRR*APRRGT
Trigger: TGTGCCCCTCCTGGGTGCTCACCGCCTGCTACACAG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGGCTCTCCTCACGTTaGCTGTGGGGAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGRLSSR*LWGSCW
Trigger: CCAGCAGCTTCCCCACAGGCAACGTGAGGAGAGCCT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGAGGCTCTCCTCACGTTaGCTGTGGGGAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAERLSSR*LWGSCW
Trigger: CCAGCAGCTTCCCCACAGGCAACGTGAGGAGAGCCT...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGCGCTTCTCGATGGCTaGCAGGGACTCCCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGALLDG*QGLPCE
Trigger: TTCACACGGGAGTCCCTGGCAGCCATCGAGAAGCGC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGTTGAGCCGCGGGCTTaGTTCTCTGCCATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGVEPRA*FSAMRF
Trigger: GAAGCGCATGGCAGAGAAGCAAGCCCGCGGCTCAAC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTAGCTTTTTGGAGGCCTaGAGGTCCAGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLSFLEA*RSSWGR
Trigger: CCGGCCCCAGCTGGACCTGCAGGCCTCCAAAAAGCT...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGGCTCTTGGGGTGGATTaGCATAGAGATCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLALGVD*HRDLAA
Trigger: AGCTGCCAGATCTCTATGGCAATCCACCCCAAGAGC...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGCTCTTGGGGTGGATTaGCATAGAGATCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLALGVD*HRDLAA
Trigger: AGCTGCCAGATCTCTATGGCAATCCACCCCAAGAGC...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAAGGAAAGTGAACGCGTaGAGGCAGAAGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGARKVNA*RQKPRA
Trigger: GGCTCGAGGCTTCTGCCTGCACGCGTTCACTTTCCT...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTCATCAGGCGGAAGAGTaGAAGAAAGGCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSHQAEE*KKGPGK
Trigger: TTTGCCTGGGCCTTTCTTGCACTCTTCCGCCTGATG...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCACATGTAGATCTTCCCTaGGGACCTGAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPHVDLP*GPEGLL
Trigger: CAGCAGACCCTCAGGTCCGCAGGGAAGATCTACATG...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACCGCTCTCCCCCGCTGTaGTGTTTTCATCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHRSPPL*CFHHLQ
Trigger: TTGCAGATGATGAAAACAGCACAGCGGGGGAGAGCG...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGCGCTCTCCCCCGCTGTaGTGTTTTCATCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLRSPPL*CFHHLQ
Trigger: TTGCAGATGATGAAAACAGCACAGCGGGGGAGAGCG...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCCGACAAGTTGCTCATaGGGGACAGGCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCPTSCS*GTGPAP
Trigger: TGGAGCTGGGCCTGTCCCGCATGAGCAACTTGTCGG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCAGTAGGGGGTGGCAATaGAGCTGGGCAGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVSRGWQ*SWAAGP
Trigger: AGGGCCAGCTGCCCAGCTGCATTGCCACCCCCTACT...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGTGCCCTGGCCTGGTTaGTCGCCTTCCTCAAACCGT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRVPWPG*SPSSNR
Trigger: ACGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCAC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCACCAGTCGGCCTGAGATaGACTGGCCTCGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPPVGLR*TGLGLR
Trigger: TCTGAGGCCGAGGCCAGTGCATCTCAGGCCGACTGG...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATCATGTCTGCTGTGCTaGCCTCGGAGCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPSCLLC*PRSNCP
Trigger: AGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGA...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAGGTGTTGGTCATGTCTaGTGTGCTGCCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGAGVGHV*CAALGA
Trigger: TGCTCCGAGGGCAGCACAGCAGACATGACCAACACC...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACCGAGGTCAGGGATCTaGTCCAGGAGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPPRSGI*SRSSAV
Trigger: CACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTCCAGCCTTTAAATGTTaGCACCTGCAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSPAFKC*HLQKGQ
Trigger: CTGGCCCTTCTGCAGGTGGCAACATTTAAAGGCTGG...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCCCAGCCTTTAAATGTTaGCACCTGCAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGPAFKC*HLQKGQ
Trigger: CTGGCCCTTCTGCAGGTGGCAACATTTAAAGGCTGG...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAGCCGACACCTCTTCGTaGTTGCGCCGGAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPADTSS*LRRSVV
Trigger: CACCACACTCCGGCGCAAGCACGAAGAGGTGTCGGC...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGCTTCAAAGAGCGTTaGAGCAGGTGCCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPCFKER*SRCLRK
Trigger: CTTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCA...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCCCCCTCTCTCAAAGGTaGCATGGTTCATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGPLSQR*HGSFPS
Trigger: AGAGGGGAATGAACCATGGCACCTTTGAGAGAGGGG...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCCATGCGCTTCTCGATaGCTGCCAGGGACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLPCASR*LPGTPV
Trigger: CACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGGATGAGCTCTTGGGGTaGATTGCCATAGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGEDELLG*IAIEIW
Trigger: CCAGATCTCTATGGCAATCCACCCCAAGAGCTCATC...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGGTGGAGGGTCGTGCTaGGCCATGAACACGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTGGGSC*AMNTQL
Trigger: CAACTGCGTGTTCATGGCCCAGCACGACCCTCCACC...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTCGGTCTCAGCGATGGTaGCTTGGTTTTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVRSQRW*LGFAPH
Trigger: ATGAGGAGCAAAACCAAGCCACCATCGCTGAGACCG...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACCGGTCTCAGCGATGGTaGCTTGGTTTTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHRSQRW*LGFAPH
Trigger: ATGAGGAGCAAAACCAAGCCACCATCGCTGAGACCG...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGCTCATGGCTGTTTACTaGGGCCAAAGGGGACATCTC +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVLMAVY*GQRGHL
Trigger: GAGATGTCCCCTTTGGCCCCAGTAAACAGCCATGAG...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGAGGAGGTGGCTTCCTaGGGATGTGGCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTREEVAS*GCGLWV
Trigger: GACCCAGAGGCCACATCCCCAGGAAGCCACCTCCTC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCCGCTGCCGTGCTCCTaGCTCCTCGAAGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLPLPCS*LLEAIY
Trigger: GTAGATGGCTTCGAGGAGCCAGGAGCACGGCAGCGG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCCGGGCCAGGGCCAGCTaGAGGTTGTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPRARAS*RLFISL
Trigger: CAGAGAGATGAACAACCTCCAGCTGGCCCTGGCCCG...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCGGGCCAGGGCCAGCTaGAGGTTGTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLRARAS*RLFISL
Trigger: CAGAGAGATGAACAACCTCCAGCTGGCCCTGGCCCG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCACCTTCTCCGTCTCTaGGGGTGGCGGGGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRHLLRL*GWRGVG
Trigger: CCCTACTCCCCGCCACCCCCAGAGACGGAGAAGGTG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGGGGGTGCCCTGGCCTaGTTGCTCGCCTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTGGALA*LLAFLK
Trigger: TTTGAGGAAGGCGAGCAACCAGGCCAGGGCACCCCC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACACACACACGGGCTCTaGATCCCCGGGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGHTHGL*IPGGAL
Trigger: CAGGGCACCCCCGGGGATCCAGAGCCCGTGTGTGTG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCCCACCGGACACAGGCTaGGATTCCTGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPPPDTG*DSCCLL
Trigger: CAGCAAGCAGCAGGAATCCCAGCCTGTGTCCGGTGG...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGCCACCGGACACAGGCTaGGATTCCTGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEPPDTG*DSCCLL
Trigger: CAGCAAGCAGCAGGAATCCCAGCCTGTGTCCGGTGG...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCCACCGGACACAGGCTaGGATTCCTGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCPPDTG*DSCCLL
Trigger: CAGCAAGCAGCAGGAATCCCAGCCTGTGTCCGGTGG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGCAGTCGCTGACACCTaGCTCCAGGTCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTAVADT*LQVLES
Trigger: GGATTCCAGGACCTGGAGCCAGGTGTCAGCGACTGC...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCCGGCCTGAGATGCACTaGCCTCGGCCTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIRPEMH*PRPQRR
Trigger: CCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCG...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGACCGCACCCTGGGGCCTaGGGTTCCGCTTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGPHPGA*GSAFHC
Trigger: GCAGTGGAAAGCGGAACCCCAGGCCCCAGGGTGCGG...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCGGTCTCACCGCACCCTaGGGCCTGGGGTTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIGLTAP*GLGFRF
Trigger: AAAGCGGAACCCCAGGCCCCAGGGTGCGGTGAGACC...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGAGCAACTGTCCTCTaGGGTCTCACCGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPGATVL*GLTAPW
Trigger: CCAGGGTGCGGTGAGACCCCAGAGGACAGTTGCTCC...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGGAGCTCAGCGGTGTTaGTCATGTCTGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSGAQRC*SCLLCC
Trigger: GCAGCACAGCAGACATGACCAACACCGCTGAGCTCC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAAGTGAAGCAGTCCTCTaGGTCCTTGACATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPSEAVL*VLDILA
Trigger: GGCCAGGATGTCAAGGACCCAGAGGACTGCTTCACT...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGTTGATGAGGCTTATCTaGTTGGGCTTGGCGATACGG +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGELMRLI*LGLAIR
Trigger: CCGTATCGCCAAGCCCAACCAGATAAGCCTCATCAA...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAATGTCCATGCAATaGATGCGGTCCCCACTCACC +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHRMSMQ*MRSPLT
Trigger: GGTGAGTGGGGACCGCATCCATTGCATGGACATTCT...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGGAGGAGCTGGAGGGTaGGCCAAGGGGTCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSGGAGG*AKGSGE
Trigger: TTCTCCCGACCCCTTGGCCCACCCTCCAGCTCCTCC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTAGGAGATGGAGGAGCTaGAGGGTGGGCCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLRRWRS*RVGQGV
Trigger: GACCCCTTGGCCCACCCTCCAGCTCCTCCATCTCCT...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGTCATAGGAGGGTaGGAAGGAAGTGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGETVIGG*EGSGGD
Trigger: ATCTCCTCCACTTCCTTCCCACCCTCCTATGACAGT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGTCAGACCCCCGCACCTaGAGGTTATCGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRSDPRT*RLSLVA
Trigger: AGCCACCAGCGATAACCTCCAGGTGCGGGGGTCTGA...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCTCAGACCCCCGCACCTaGAGGTTATCGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSSDPRT*RLSLVA
Trigger: AGCCACCAGCGATAACCTCCAGGTGCGGGGGTCTGA...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCACCGAGGCTCACACGATaGACTCACGGTCCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPPRLTR*THGPCP
Trigger: CGGACAGGGACCGTGAGTCCATCGTGTGAGCCTCGG...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCCCACAGAACTCTGCCTaGTTGATCCGCGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSPQNSA*LIRGAE
Trigger: CTCAGCCCCGCGGATCAACCAGGCAGAGTTCTGTGG...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGTTTCGCCTCAGCAGCTaGGATGAAGTTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGEFRLSS*DEVAFQ
Trigger: CTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAA...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAGGCAGTGAAGACCTGTaGGAGCCACACTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPGSEDL*EPHWIP
Trigger: TGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCTGTCTCCCTTAGGCTaGGAGCCTGGGTCCCACGGC +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGLSPLG*EPGSHG
Trigger: GCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAAAACTCCTCCGCGTATaGTCCAGAGAGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSKLLRV*SREPWE
Trigger: CTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCATGGGAGAGCTGGAATaGGGCAGCCAAGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVMGELE*GSQAPA
Trigger: GGCAGGGGCTTGGCTGCCCCATTCCAGCTCTCCCAT...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTATGGGAGAGCTGGAATaGGGCAGCCAAGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLMGELE*GSQAPA
Trigger: GGCAGGGGCTTGGCTGCCCCATTCCAGCTCTCCCAT...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCAGGTGAGACTGAGGTaGCCTGGGAGGCATGCGCCC +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSQVRLR*PGRHAP
Trigger: GGGCGCATGCCTCCCAGGCCACCTCAGTCTCACCTG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTAACCGTGTCCCACACTaGACTCAAAGGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVNRVPH*TQREHR
Trigger: CCTGTGTTCCCTTTGAGTCCAGTGTGGGACACGGTT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCGGGATTCCTGCTTGCTaGACTCCTCCTCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSGIPAC*TPPPCP
Trigger: TGGGCACGGAGGAGGAGTCCAGCAAGCAGGAATCCC...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCCCAGGGGCTCTCCGATaGGCTCTTGGGGTGGATTGC +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIPGALR*ALGVDC
Trigger: GCAATCCACCCCAAGAGCTCATCGGAGAGCCCCTGG...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGAGGCGTTGGTGGCACTaGACCGGAAGATGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTRRWWH*TGRWSC
Trigger: GCAAGACCATCTTCCGGTTCAGTGCCACCAACGCCT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAGGTGTAAATGGCGGTaGAGGTGTACTCGACATACT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQRCKWR*RCTRHT
Trigger: AGTATGTCGAGTACACCTTCACCGCCATTTACACCT...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCTCGAGCCAGAATCTTaGCCAGAGACTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLLEPES*PETQRC
Trigger: ACACCTTTGAGTCTCTGGTCAAGATTCTGGCTCGAG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCAGAGGTGCCGTTCTTaGGCAGGTAATTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQQRCRS*AGNFLD
Trigger: ATCCAGAAAATTACCTGCTCAAGAACGGCACCTCTG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACACTCCTCAGTTCCTaGAGACATCCGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGETLLSS*RHPFSP
Trigger: AGGAGAAAACGGATGTCTTCAGGAACTGAGGAGTGT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCCTCGCCTGCGAAAGGTaGAAATGCTCCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSILACER*KCSRGW
Trigger: CCAGCCGCGGGAGCATTTTCACCTTTCGCAGGCGAG...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACTTCACTCCCTGCTTaGTGGACATCCACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSTSLPA*WTSTAG
Trigger: GCCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACCCAGGTGGTCCGCTTaGCAAAGCGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGPRWSA*QSAGPS
Trigger: AGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCTTGGTCATCTGTGTCTaGCTCGGCCACAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSLVICV*LGHSDG
Trigger: CCCATCGCTGTGGCCGAGTCAGACACAGATGACCAA...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGAGAGGAGGCAGTCGCTaGCACCTGGCTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRRGGSR*HLAPGP
Trigger: AGGACCTGGAGCCAGGTGTCAGCGACTGCCTCCTCT...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACACTCAAGCAGAACCTTaGTGGTCTTCCGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHTQAEP*WSSAPL
Trigger: TAGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGT...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCCCACGTTGTCAAAGTTaGCTTTCACCTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLPRCQS*LSPWSS
Trigger: ACTGGACCAAGGTGAAAGTCAACTTTGACAACGTGG...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCATGCCAGCCTCCCACTTaGCATAAGCGAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSCQPPT*HKRSWP
Trigger: TGGCCAACTTCGCTTATGTCAAGTGGGAGGCTGGCA...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGCCGGAGTGTGGTGGTaGTGGGCTCGTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRAGVWW*WARRRS
Trigger: AGATCTCCTACGAGCCCATCACCACCACACTCCGGC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCATCACGTAGGCGATaGGGCCCTCTCGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRSSRRR*GPLAQG
Trigger: CCCCTGAGCGAGAGGGCCTCATCGCCTACGTGATGA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCCTCAGCAGCTGGGATaGAGTTGCTTTCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCPQQLG*SCFPEP
Trigger: CGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGCCTCAGCAGCTGGGATaGAGTTGCTTTCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGPQQLG*SCFPEP
Trigger: CGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGG...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHIPLLL*EQTSGC
Trigger: GCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAAT...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGTGTGTGTGCTTGTGTaGGTGGGGGTTCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLVCVLV*VGVQPS
Trigger: GGAGGGCTGAACCCCCACTCACACAAGCACACACAC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGTCTGGCCTCCGTGTGTaGGGACTGTGTGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAESGLRV*GLCVCA
Trigger: AGCACACACACACAGTCCTCACACACGGAGGCCAGA...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTCTGGCCTCCGTGTGTaGGGACTGTGTGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCSGLRV*GLCVCA
Trigger: AGCACACACACACAGTCCTCACACACGGAGGCCAGA...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCTGGCCTCCGTGTGTaGGGACTGTGTGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLSGLRV*GLCVCA
Trigger: AGCACACACACACAGTCCTCACACACGGAGGCCAGA...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGTCTGGCCTCCGTGTGTaGGGACTGTGTGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGSGLRV*GLCVCA
Trigger: AGCACACACACACAGTCCTCACACACGGAGGCCAGA...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATTCTCTTCAGGCAGGCTaGGGGGCCGCCATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHSLQAG*GAAMAQ
Trigger: CTGAGCCATGGCGGCCCCTCAGCCTGCCTGAAGAGA...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATATCAGGATCCCGGGCTaGGCCAGAGAGGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHIRIPG*AREAGP
Trigger: AGGCCCAGCCTCTCTGGCTCAGCCCGGGATCCTGAT...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGACAACATCTGGCACTTaGTGTCTGTCCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVTTSGT*CLSFPP
Trigger: AGGAGGGAAGGACAGACATCAAGTGCCAGATGTTGT...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGACAACATCTGGCACTTaGTGTCTGTCCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLTTSGT*CLSFPP
Trigger: AGGAGGGAAGGACAGACATCAAGTGCCAGATGTTGT...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGTTGTATTCCCACTaGGGCTGCTCTTCATACACC +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHRLYSH*GCSSYT
Trigger: GGTGTATGAAGAGCAGCCTCAGTGGGAATACAACCT...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414099.6
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGCGCTTCTCGATGGCTaGCAGGGACTCCCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPALLDG*QGLPCE
Trigger: TTCACACGGGAGTCCCTGGCAGCCATCGAGAAGCGC...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGCGGGCTTGCTTCTCTaGCATGCGCTTCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTAGLLL*HALLDG
Trigger: GCCATCGAGAAGCGCATGGCAGAGAAGCAAGCCCGC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGTTGAGCCGCGGGCTTaGTTCTCTGCCATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLVEPRA*FSAMRF
Trigger: GAAGCGCATGGCAGAGAAGCAAGCCCGCGGCTCAAC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGTTGAGCCGCGGGCTTaGTTCTCTGCCATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRVEPRA*FSAMRF
Trigger: GAAGCGCATGGCAGAGAAGCAAGCCCGCGGCTCAAC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTAGCTTTTTGGAGGCCTaGAGGTCCAGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSSFLEA*RSSWGR
Trigger: CCGGCCCCAGCTGGACCTGCAGGCCTCCAAAAAGCT...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACAGGAAAGTGAACGCGTaGAGGCAGAAGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHRKVNA*RQKPRA
Trigger: GGCTCGAGGCTTCTGCCTGCACGCGTTCACTTTCCT...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAGGAGGACTCGGAAGGTaGGTAAGGCTGAGACATTGC +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGAGGLGR*VRLRHC
Trigger: GCAATGTCTCAGCCTTACGCACCTTCCGAGTCCTCC...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333535.9
ENST00000423572.7
CDS-3UTR GCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTACCAACTTCACTCCCTaGTTGATGGACATCCACAGC +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVTNFTP*LMDIHS
Trigger: GCTGTGGATGTCCATCAAGCAGGGAGTGAAGTTGGT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTACCAACTTCACTCCCTaGTTGATGGACATCCACAGC +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSTNFTP*LMDIHS
Trigger: GCTGTGGATGTCCATCAAGCAGGGAGTGAAGTTGGT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTACCAGGTTTCCGACCTaGAGCATCTCCTCGAATTCA +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVTRFPT*SISSNS
Trigger: TGAATTCGAGGAGATGCTGCAGGTCGGAAACCTGGT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCACCAGGTTTCCGACCTaGAGCATCTCCTCGAATTCA +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRTRFPT*SISSNS
Trigger: TGAATTCGAGGAGATGCTGCAGGTCGGAAACCTGGT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACCGACAAGTTGCTCATaGGGGACAGGCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPPTSCS*GTGPAP
Trigger: TGGAGCTGGGCCTGTCCCGCATGAGCAACTTGTCGG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATGCAGGCCCCTCTGGATaGGGGCCAGGGCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNAGPSG*GPGPAG
Trigger: TCCAGCTGGCCCTGGCCCGCATCCAGAGGGGCCTGC...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGGGATTCCTGCTGCTTaGTGGACTCCTCCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLGIPAA*WTPPPC
Trigger: GCACGGAGGAGGAGTCCAGCAAGCAGCAGGAATCCC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAGGCTGGGATTCCTGCTaGTTGCTGGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPGWDSC*LLDSSS
Trigger: GGAGGAGGAGTCCAGCAAGCAGCAGGAATCCCAGCC...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR GCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGGTGTTGGTCATGTCTaGTGTGCTGCCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGGVGHV*CAALGA
Trigger: TGCTCCGAGGGCAGCACAGCAGACATGACCAACACC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGCCGACACCTCTTCGTaGTTGCGCCGGAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRADTSS*LRRSVV
Trigger: CACCACACTCCGGCGCAAGCACGAAGAGGTGTCGGC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGACTTCGGAGAGGCCGCTaGCCGCCTGCTGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGLRRGR*PPADGR
Trigger: TCTTCCGTCAGCAGGCGGGCAGCGGCCTCTCCGAAG...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAGGCGCCACAGAACTCTaGCTGGTTGATCCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGGATEL*LVDPRG
Trigger: GCCCCGCGGATCAACCAGGCAGAGTTCTGTGGCGCC...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGCCGTGAATGGGGCTTaGACCCTTGTGTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSAVNGA*TLVSFG
Trigger: ACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGAGCAAGGACAAGCTaGATGCCAGGCCGTGAATGG +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHGARTS*MPGREW
Trigger: CCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGGAGCAAGGACAAGCTaGATGCCAGGCCGTGAATGG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTGARTS*MPGREW
Trigger: CCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCC...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTTGGCTGGGCAGGGCCTaGCAGGTTCCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFWLGRA*QVPGAR
Trigger: CCTTGCTCCTGGAACCTGGCAGGCCCTGCCCAGCCA...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGACCATCCCTTTCCCTaGACAGGGCGCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRDHPFP*TGRRAK
Trigger: CTTGGCCCTGCGCCCTGTGCAGGGAAAGGGATGGTC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTGCCCCCTTCAGCACTaGCACAAATGTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCCPLQH*HKCPAL
Trigger: GAGGGCTGGACATTTGTGGCAGTGCTGAAGGGGGCA...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGTGCCCCCTTCAGCACTaGCACAAATGTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGCPLQH*HKCPAL
Trigger: GAGGGCTGGACATTTGTGGCAGTGCTGAAGGGGGCA...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGTTTACTCGCCGGCAATaGCCCCTTCAGCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEFTRRQ*PLQHCH
Trigger: GTGGCAGTGCTGAAGGGGGCATTGCCGGCGAGTAAA...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTTACTCGCCGGCAATaGCCCCTTCAGCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVFTRRQ*PLQHCH
Trigger: GTGGCAGTGCTGAAGGGGGCATTGCCGGCGAGTAAA...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCCATGCGCTTCTCGATaGCTGCCAGGGACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRPCASR*LPGTPV
Trigger: CACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGGCTCTCCTGCAAGGTaGTTGAGCCGCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSGSPAR*LSRGLA
Trigger: AGCAAGCCCGCGGCTCAACCACCTTGCAGGAGAGCC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTGATGAGCTCTTGGGGTaGATTGCCATAGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSDELLG*IAIEIW
Trigger: CCAGATCTCTATGGCAATCCACCCCAAGAGCTCATC...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGATGAGCTCTTGGGGTaGATTGCCATAGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSDELLG*IAIEIW
Trigger: CCAGATCTCTATGGCAATCCACCCCAAGAGCTCATC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCTCTCCGGATGGGGTaGAAGGGACTGAGGACATAC +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHALRMG*KGLRTY
Trigger: GTATGTCCTCAGTCCCTTCCACCCCATCCGGAGAGC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGCTCTCCGGATGGGGTaGAAGGGACTGAGGACATAC +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCALRMG*KGLRTY
Trigger: GTATGTCCTCAGTCCCTTCCACCCCATCCGGAGAGC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAGGTGGAGGGTCGTGCTaGGCCATGAACACGCAGTTG +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPGGGSC*AMNTQL
Trigger: CAACTGCGTGTTCATGGCCCAGCACGACCCTCCACC...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCACAAAGGAATCGAAGCTaGTGTAGCCGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSQRNRS*CSRGRG
Trigger: ACCCCGACCACGGCTACACCAGCTTCGATTCCTTTG...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCACCTCGGTCTCAGCGATaGTGGCTTGGTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSPRSQR*WLGFAP
Trigger: AGGAGCAAAACCAAGCCACCATCGCTGAGACCGAGG...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCCCGCGGCTGGAACGTaGCTTCATAGAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTPAAGT*LHRSPA
Trigger: AGCAGGACTTCTATGAAGCCACGTTCCAGCCGCGGG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAGCAGTGATGTGTGGTaGCTCTCGCTCTCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPSSDVW*LSLSPA
Trigger: AGCGGGGGAGAGCGAGAGCCACCACACATCACTGCT...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACCAGCAGTGATGTGTaGTGGCTCTCGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTTSSDV*WLSLSP
Trigger: GGGGGAGAGCGAGAGCCACCACACATCACTGCTGGT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCGCTGTCCCTGGGCACTaGTCCGGCGCAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCAVPGH*SGAGAR
Trigger: CCTGGCCCCTGCGCCGGACCAGTGCCCAGGGACAGC...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTTTGCCATGGAGGGCGTaGCCAGGAGCCGAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFLPWRA*PGAEVP
Trigger: CGGAACCTCGGCTCCTGGCCACGCCCTCCATGGCAA...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCTGTTCTTTTTGCCATaGAGGGCGTGGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLLFFLP*RAWPGA
Trigger: GGCTCCTGGCCACGCCCTCCATGGCAAAAAGAACAG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCTGTTCTTTTTGCCATaGAGGGCGTGGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTLFFLP*RAWPGA
Trigger: GGCTCCTGGCCACGCCCTCCATGGCAAAAAGAACAG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGAGGAGGTGGCTTCCTaGGGATGTGGCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHREEVAS*GCGLWV
Trigger: GACCCAGAGGCCACATCCCCAGGAAGCCACCTCCTC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGCATGGTGGACACTTGTaGCGAGACTCCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLHGGHL*RDSSNS
Trigger: AGAGTTAGAGGAGTCTCGCCACAAGTGTCCACCATG...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGTGTTTCCTTGCGGGTaGGAGGCACCTTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHVFPCG*EAPSPS
Trigger: AGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACAC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAGTGTTTCCTTGCGGGTaGGAGGCACCTTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPVFPCG*EAPSPS
Trigger: AGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACAC...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGGGGGTGCCCTGGCCTaGTTGCTCGCCTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRGGALA*LLAFLK
Trigger: TTTGAGGAAGGCGAGCAACCAGGCCAGGGCACCCCC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCATTCCTGCTGCTTGCTaGACTCCTCCTCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSIPAAC*TPPPCP
Trigger: TGGGCACGGAGGAGGAGTCCAGCAAGCAGCAGGAAT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGATTCCTGCTGCTTGCTaGACTCCTCCTCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGIPAAC*TPPPCP
Trigger: TGGGCACGGAGGAGGAGTCCAGCAAGCAGCAGGAAT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGGAGCTCAGCGGTGTTaGTCATGTCTGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLGAQRC*SCLLCC
Trigger: GCAGCACAGCAGACATGACCAACACCGCTGAGCTCC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTGGGTCCTTGACATCCTaGCCGAGGTCAGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPGSLTS*PRSGIC
Trigger: GCAGATCCCTGACCTCGGCCAGGATGTCAAGGACCC...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCGGGTCCTTGACATCCTaGCCGAGGTCAGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVGSLTS*PRSGIC
Trigger: GCAGATCCCTGACCTCGGCCAGGATGTCAAGGACCC...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGGGTCCTTGACATCCTaGCCGAGGTCAGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLGSLTS*PRSGIC
Trigger: GCAGATCCCTGACCTCGGCCAGGATGTCAAGGACCC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAAGTGAAGCAGTCCTCTaGGTCCTTGACATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGASEAVL*VLDILA
Trigger: GGCCAGGATGTCAAGGACCCAGAGGACTGCTTCACT...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCCACCAGACCTTCCCTaGGGCCTGTGTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRPPDLP*GLCGVH
Trigger: GTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCTTGATGAGGCTTATCTaGTTGGGCTTGGCGATACGG +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRLMRLI*LGLAIR
Trigger: CCGTATCGCCAAGCCCAACCAGATAAGCCTCATCAA...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGAACTTCTCCTCCATCTaGATCTTCAGGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLNFSSI*IFRASI
Trigger: GATGGACGCCCTGAAGATCCAGATGGAGGAGAAGTT...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGCTGCGGAAGGCTCTCTaGATAACCATGGCCGACACC +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVLRKAL*ITMADT
Trigger: GGTGTCGGCCATGGTTATCCAGAGAGCCTTCCGCAG...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTACTGTCATAGGAGGGTaGGAAGGAAGTGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSTVIGG*EGSGGD
Trigger: ATCTCCTCCACTTCCTTCCCACCCTCCTATGACAGT...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCACTGTCATAGGAGGGTaGGAAGGAAGTGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRTVIGG*EGSGGD
Trigger: ATCTCCTCCACTTCCTTCCCACCCTCCTATGACAGT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTACTGTCATAGGAGGGTaGGAAGGAAGTGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSTVIGG*EGSGGD
Trigger: ATCTCCTCCACTTCCTTCCCACCCTCCTATGACAGT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCATCAGACCCCCGCACCTaGAGGTTATCGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPSDPRT*RLSLVA
Trigger: AGCCACCAGCGATAACCTCCAGGTGCGGGGGTCTGA...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCTTTTCAGTGTGTCCTaGCCAGCCAGGCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVLFSVS*PARPRL
Trigger: GAGCCTCGGCCTGGCTGGCCAGGACACACTGAAAAG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTTTTCGCCTCAGCAGCTaGGATGAAGTTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVFRLSS*DEVAFQ
Trigger: CTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAA...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAGCATCTCAGGTCAAGTaGGAGGGGGACCCCATTCGA +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPASQVK*EGDPIR
Trigger: TCGAATGGGGTCCCCCTCCCACTTGACCTGAGATGC...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGTGTGCTTGTGTGAGTaGGGGTTCAGCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTVCLCE*GFSPPS
Trigger: GCTGGGAGGGCTGAACCCCCACTCACACAAGCACAC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGATGCCAGGCCGTGAATaGGGCTTGCACCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLMPGRE*GLHPCV
Trigger: GACACAAGGGTGCAAGCCCCATTCACGGCCTGGCAT...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGATGCCAGGCCGTGAATaGGGCTTGCACCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTMPGRE*GLHPCV
Trigger: GACACAAGGGTGCAAGCCCCATTCACGGCCTGGCAT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAGCCCCAAACCCCCATaGCTCAGCCCTCTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPSPKPP*LSPLFR
Trigger: TCGGAAGAGAGGGCTGAGCCATGGGGGTTTGGGGCT...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGTGGTCCAGAGAGCCCTaGGAGATCGCCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRWSREP*EIASFL
Trigger: GAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCA...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGTGGTCCAGAGAGCCCTaGGAGATCGCCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEWSREP*EIASFL
Trigger: GAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCA...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGAAACTCCTCCGCGTATaGTCCAGAGAGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLKLLRV*SREPWE
Trigger: CTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTAAGAGGTCCTCTGTGTaGGTGCCATCAGGATCCCGG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCKRSSV*VPSGSR
Trigger: CCGGGATCCTGATGGCACCCACACAGAGGACCTCTT...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGAAGAGGTCCTCTGTGTaGGTGCCATCAGGATCCCGG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTKRSSV*VPSGSR
Trigger: CCGGGATCCTGATGGCACCCACACAGAGGACCTCTT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCAGGTGAGACTGAGGTaGCCTGGGAGGCATGCGCCC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFQVRLR*PGRHAP
Trigger: GGGCGCATGCCTCCCAGGCCACCTCAGTCTCACCTG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGGGATTCCTGCTTGCTaGACTCCTCCTCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLGIPAC*TPPPCP
Trigger: TGGGCACGGAGGAGGAGTCCAGCAAGCAGGAATCCC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCCTGGGGTCTGCTTGCTaGACTCCTCCTCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSILGSAC*TPPPCP
Trigger: TGGGCACGGAGGAGGAGTCCAGCAAGCAGACCCCAG...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450102.6
CDS-3UTR CCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAGGAGCAACTGTCCTCTaGGGTCTGCTTGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPGATVL*GLLAGL
Trigger: GAGTCCAGCAAGCAGACCCCAGAGGACAGTTGCTCC...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450102.6
3UTR CAA 72 bp GTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTaGTGTGAGTGGGGGTTCAGCCCTCCCAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: VWPPCVRTVCVC*CEWGFSPPSIS
Trigger: TGAGATGCTGGGAGGGCTGAACCCCCACTCACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CAA 72 bp GGGCAGCCAAGCCCCTGCCTGCTCAGGCTTCGCCAGTaGACCCTGTTACCTCAGGGTGACAGTTCTCTATGT +
Preference number: 4 (lower is better)
Translates to: GQPSPCLLRLRQ*TLLPQGDSSLC
Trigger: ACATAGAGAACTGTCACCCTGAGGTAACAGGGTCAACTGGCGAAGCCTGAGCAGGCAGGGGCTTGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTGGGGTGGAAGGGACTaGGGACATACAAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPWGGRD*GHTRRW
Trigger: CCAACGCCTTGTATGTCCTCAGTCCCTTCCACCCCA...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGAGGTGTAAATGGCGGTaGAGGTGTACTCGACATACT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLRCKWR*RCTRHT
Trigger: AGTATGTCGAGTACACCTTCACCGCCATTTACACCT...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCGGTCCCGAAGGAAAGTaGACGCGTGCAGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIGPEGK*TRAGRS
Trigger: GCTTCTGCCTGCACGCGTTCACTTTCCTTCGGGACC...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGGTCCCGAAGGAAAGTaGACGCGTGCAGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSGPEGK*TRAGRS
Trigger: GCTTCTGCCTGCACGCGTTCACTTTCCTTCGGGACC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGGTCCCGAAGGAAAGTaGACGCGTGCAGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRGPEGK*TRAGRS
Trigger: GCTTCTGCCTGCACGCGTTCACTTTCCTTCGGGACC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCAGAGGTGCCGTTCTTaGGCAGGTAATTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRQRCRS*AGNFLD
Trigger: ATCCAGAAAATTACCTGCTCAAGAACGGCACCTCTG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCAGAGGTGCCGTTCTTaGGCAGGTAATTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLQRCRS*AGNFLD
Trigger: ATCCAGAAAATTACCTGCTCAAGAACGGCACCTCTG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTTCCCTGCGGACCTaGGGGTCTGCTGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRSSLRT*GSADRG
Trigger: GCCTCTATCAGCAGACCCTCAGGTCCGCAGGGAAGA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGACACTCCTCAGTTCCTaGAGACATCCGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLTLLSS*RHPFSP
Trigger: AGGAGAAAACGGATGTCTTCAGGAACTGAGGAGTGT...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGACACTCCTCAGTTCCTaGAGACATCCGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLTLLSS*RHPFSP
Trigger: AGGAGAAAACGGATGTCTTCAGGAACTGAGGAGTGT...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTCTGGGACCATCTTCTaGGTCAGACTTGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHSGTIF*VRLGEP
Trigger: AGGCTCCCCAAGTCTGACTCAGAAGATGGTCCCAGA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGGTGAGGCTGAGATaGTTCATTGCTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTRVRLR*FIALGP
Trigger: TGGTCCCAGAGCAATGAATCATCTCAGCCTCACCCG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCGGGTGAGGCTGAGATaGTTCATTGCTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCRVRLR*FIALGP
Trigger: TGGTCCCAGAGCAATGAATCATCTCAGCCTCACCCG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCAGGGCACCAGCAGTaGTGTGTGGTGGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFPGHQQ*CVVALA
Trigger: AGCGAGAGCCACCACACATCACTGCTGGTGCCCTGG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAATGATTTGGCCAGCTTaGAGACCCGCAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPMIWPA*RPAAGG
Trigger: TCCGCCTGCTGCGGGTCTTCAAGCTGGCCAAATCAT...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGATGATTTGGCCAGCTTaGAGACCCGCAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRMIWPA*RPAAGG
Trigger: TCCGCCTGCTGCGGGTCTTCAAGCTGGCCAAATCAT...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTATGATTTGGCCAGCTTaGAGACCCGCAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLMIWPA*RPAAGG
Trigger: TCCGCCTGCTGCGGGTCTTCAAGCTGGCCAAATCAT...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCAGGGCTGCGGGCTTCTaGGGCCGCTGCCGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCRAAGF*GRCRRR
Trigger: TCTCCTGCGGCAGCGGCCTCAGAAGCCCGCAGCCCT...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCACATGCCCTCAAATCGTaGCAGAGCTCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPHALKS*QSSQRT
Trigger: CGTCCTCTGAGAGCTCTGTCACGATTTGAGGGCATG...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCTCCCTCTGTCTGGTTaGTGCACCTCCCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLLPLSG*CTSQTS
Trigger: GGAAGTTTGGGAGGTGCATCAACCAGACAGAGGGAG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCCACGTTGTCAAAGTTaGCTTTCACCTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRPRCQS*LSPWSS
Trigger: ACTGGACCAAGGTGAAAGTCAACTTTGACAACGTGG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCACCTCAGCAGCTGGGATaGAGTTGCTTTCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPPQQLG*SCFPEP
Trigger: CGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGG...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGTGTGTGTGCTTGTGTaGGTGGGGGTTCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSVCVLV*VGVQPS
Trigger: GGAGGGCTGAACCCCCACTCACACAAGCACACACAC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCAGGATTGTCAGCAGCTaGAGAGGTCCTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSRIVSS*RGPGGD
Trigger: ATCACCCCCAGGACCTCTTCAGCTGCTGACAATCCT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGTGCGGAAGCTGCTGGTaGCCCGAGGTAATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRCGSCW*PEVIGS
Trigger: ACTTCCTATTACCTCGGGGCACCAGCAGCTTCCGCA...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCATGCGGAAGCTGCTGGTaGCCCGAGGTAATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPCGSCW*PEVIGS
Trigger: ACTTCCTATTACCTCGGGGCACCAGCAGCTTCCGCA...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCTTGCTTCTCTGCCATaGGCTTCTCGATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLLASLP*ASRWLP
Trigger: TGGCAGCCATCGAGAAGCGCATGGCAGAGAAGCAAG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCACTTGCTTCTCTGCCATaGGCTTCTCGATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPLASLP*ASRWLP
Trigger: TGGCAGCCATCGAGAAGCGCATGGCAGAGAAGCAAG...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACCTTGCTTCTCTGCCATaGGCTTCTCGATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHLASLP*ASRWLP
Trigger: TGGCAGCCATCGAGAAGCGCATGGCAGAGAAGCAAG...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGGCGGGCTTGCTTCTCTaGCATGCGCTTCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGAGLLL*HALLDG
Trigger: GCCATCGAGAAGCGCATGGCAGAGAAGCAAGCCCGC...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGTTGAGCCGCGGGCTTaGTTCTCTGCCATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRVEPRA*FSAMRF
Trigger: GAAGCGCATGGCAGAGAAGCAAGCCCGCGGCTCAAC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTAGCTTTTTGGAGGCCTaGAGGTCCAGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFSFLEA*RSSWGR
Trigger: CCGGCCCCAGCTGGACCTGCAGGCCTCCAAAAAGCT...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAGGAAAGTGAACGCGTaGAGGCAGAAGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPRKVNA*RQKPRA
Trigger: GGCTCGAGGCTTCTGCCTGCACGCGTTCACTTTCCT...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGTCGTGTCTGGCGGGTaGTCTAGCATCACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFVVSGG*SSITGR
Trigger: CCGCCCTGTGATGCTAGAGCACCCGCCAGACACGAC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAGTCGTGTCTGGCGGGTaGTCTAGCATCACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGVVSGG*SSITGR
Trigger: CCGCCCTGTGATGCTAGAGCACCCGCCAGACACGAC...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGAAGAAGTCCATCATGTaGCAGCGAGGCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVKKSIM*QRGSRP
Trigger: AGGCCTGCTGCCTCGCTGGCACATGATGGACTTCTT...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGAAGAAGTCCATCATGTaGCAGCGAGGCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVKKSIM*QRGSRP
Trigger: AGGCCTGCTGCCTCGCTGGCACATGATGGACTTCTT...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGAGCAGGCATAATGACTaGCCCGACACCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTSRHND*PDTSMQ
Trigger: CTGCATGGAGGTGTCGGGGCAGTCATTATGCCTGCT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCAGGCATAATGACTaGCCCGACACCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPSRHND*PDTSMQ
Trigger: CTGCATGGAGGTGTCGGGGCAGTCATTATGCCTGCT...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCGGCTGGGATTCCTGCTaGTTGCTGGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIGWDSC*LLDSSS
Trigger: GGAGGAGGAGTCCAGCAAGCAGCAGGAATCCCAGCC...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACCAGTCGGCCTGAGATaGACTGGCCTCGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGPVGLR*TGLGLR
Trigger: TCTGAGGCCGAGGCCAGTGCATCTCAGGCCGACTGG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGTCATGTCTGCTGTGCTaGCCTCGGAGCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGSCLLC*PRSNCP
Trigger: AGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGA...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSWSCLL*CPRSNC
Trigger: ACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCA...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGACCGAGGTCAGGGATCTaGTCCAGGAGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGPRSGI*SRSSAV
Trigger: CACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGG...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGGTGACGTCAAAGGCCTaGTTGGTCACAATGTCGAAT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLVTSKA*LVTMSN
Trigger: ATTCGACATTGTGACCAAGCAGGCCTTTGACGTCAC...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCTGTCCATGCAATGGATaGGGTCCCCACTCACCATGG +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPCPCNG*GPHSPW
Trigger: CCATGGTGAGTGGGGACCGCATCCATTGCATGGACA...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAGCCGACACCTCTTCGTaGTTGCGCCGGAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGADTSS*LRRSVV
Trigger: CACCACACTCCGGCGCAAGCACGAAGAGGTGTCGGC...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTGCTTCAAAGAGCGTTaGAGCAGGTGCCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCCFKER*SRCLRK
Trigger: CTTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCA...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCTGCTTCAAAGAGCGTTaGAGCAGGTGCCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSCFKER*SRCLRK
Trigger: CTTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCA...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGGAACAGACTTCCGGCTaGTCCATAGACACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVEQTSG*SIDTLV
Trigger: AACAAGAGTGTCTATGGAGCAGCCGGAAGTCTGTTC...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAGGAGCAAGGACAAGCTaGATGCCAGGCCGTGAATGG +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPGARTS*MPGREW
Trigger: CCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCC...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTTCTCATCCTGCTTCTaGGCACAGGCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCFSSCF*AQALLT
Trigger: CGTGAGGAGAGCCTGTGCCCAGAAGCAGGATGAGAA...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTACCTGCGGAAGCTGCTaGTGCCCCGAGGTAATAGGA +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLTCGSC*CPEVIG
Trigger: TCCTATTACCTCGGGGCACCAGCAGCTTCCGCAGGT...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAACCTGCGGAAGCTGCTaGTGCCCCGAGGTAATAGGA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPTCGSC*CPEVIG
Trigger: TCCTATTACCTCGGGGCACCAGCAGCTTCCGCAGGT...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGGCTCTCCTGCAAGGTaGTTGAGCCGCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFGSPAR*LSRGLA
Trigger: AGCAAGCCCGCGGCTCAACCACCTTGCAGGAGAGCC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACATTGCCATAGAGATCTaGCAGCTTTTTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHIAIEI*QLFGGL
Trigger: CAGGCCTCCAAAAAGCTGCCAGATCTCTATGGCAAT...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTATTGCCATAGAGATCTaGCAGCTTTTTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSIAIEI*QLFGGL
Trigger: CAGGCCTCCAAAAAGCTGCCAGATCTCTATGGCAAT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCATTGCCATAGAGATCTaGCAGCTTTTTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGIAIEI*QLFGGL
Trigger: CAGGCCTCCAAAAAGCTGCCAGATCTCTATGGCAAT...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGCTCTCCGGATGGGGTaGAAGGGACTGAGGACATAC +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTALRMG*KGLRTY
Trigger: GTATGTCCTCAGTCCCTTCCACCCCATCCGGAGAGC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCGCTCTCCGGATGGGGTaGAAGGGACTGAGGACATAC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVALRMG*KGLRTY
Trigger: GTATGTCCTCAGTCCCTTCCACCCCATCCGGAGAGC...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCAAAGGAATCGAAGCTaGTGTAGCCGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCQRNRS*CSRGRG
Trigger: ACCCCGACCACGGCTACACCAGCTTCGATTCCTTTG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCAAAGGAATCGAAGCTaGTGTAGCCGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRQRNRS*CSRGRG
Trigger: ACCCCGACCACGGCTACACCAGCTTCGATTCCTTTG...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCACTCATGGCTGTTTACTaGGGCCAAAGGGGACATCTC +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSLMAVY*GQRGHL
Trigger: GAGATGTCCCCTTTGGCCCCAGTAAACAGCCATGAG...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGTTGCTTCTTCTCTCATaGCTGTTTACTGGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQLLLLS*LFTGAK
Trigger: TTTGGCCCCAGTAAACAGCCATGAGAGAAGAAGCAA...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCCCCGCGGCTGGAACGTaGCTTCATAGAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTPAAGT*LHRSPA
Trigger: AGCAGGACTTCTATGAAGCCACGTTCCAGCCGCGGG...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCCCGCGGCTGGAACGTaGCTTCATAGAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVPAAGT*LHRSPA
Trigger: AGCAGGACTTCTATGAAGCCACGTTCCAGCCGCGGG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCACCAGCAGTGATGTGTaGTGGCTCTCGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSITSSDV*WLSLSP
Trigger: GGGGGAGAGCGAGAGCCACCACACATCACTGCTGGT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTACGGTTCCAGCATGGTaGACACTTGTGGCGAGACTC +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCTVPAW*TLVARL
Trigger: GAGTCTCGCCACAAGTGTCCACCATGCTGGAACCGT...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGACGGTTCCAGCATGGTaGACACTTGTGGCGAGACTC +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVTVPAW*TLVARL
Trigger: GAGTCTCGCCACAAGTGTCCACCATGCTGGAACCGT...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGACGGTTCCAGCATGGTaGACACTTGTGGCGAGACTC +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTTVPAW*TLVARL
Trigger: GAGTCTCGCCACAAGTGTCCACCATGCTGGAACCGT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGACGGTTCCAGCATGGTaGACACTTGTGGCGAGACTC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLTVPAW*TLVARL
Trigger: GAGTCTCGCCACAAGTGTCCACCATGCTGGAACCGT...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGAGACGGTTCCAGCATaGTGGACACTTGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHETVPA*WTLVAR
Trigger: TCTCGCCACAAGTGTCCACCATGCTGGAACCGTCTC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGAGACGGTTCCAGCATaGTGGACACTTGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTETVPA*WTLVAR
Trigger: TCTCGCCACAAGTGTCCACCATGCTGGAACCGTCTC...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCGGGTGGCAATGCAGCTaGGCAGCTGGCCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCGWQCS*AAGPGR
Trigger: CCGCCCAGGGCCAGCTGCCCAGCTGCATTGCCACCC...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGTGTTTCCTTGCGGGTaGGAGGCACCTTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRVFPCG*EAPSPS
Trigger: AGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACAC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTCCCCGGGGGTGCCCTaGCCTGGTTGCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCSPGVP*PGCSPS
Trigger: GGAAGGCGAGCAACCAGGCCAGGGCACCCCCGGGGA...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTCCTCATCTTCTTCTTaGTCATCTGTGTCTGACTCG +
Preference number: 4 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLSSSSS*SSVSDS
Trigger: CGAGTCAGACACAGATGACCAAGAAGAAGATGAGGA...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGGCAGTCGCTGACACCTaGCTCCAGGTCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGAVADT*LQVLES
Trigger: GGATTCCAGGACCTGGAGCCAGGTGTCAGCGACTGC...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGGAGCAACTGTCCTCTaGGGTCTCACCGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFGATVL*GLTAPW
Trigger: CCAGGGTGCGGTGAGACCCCAGAGGACAGTTGCTCC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCGGAGCTCAGCGGTGTTaGTCATGTCTGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVGAQRC*SCLLCC
Trigger: GCAGCACAGCAGACATGACCAACACCGCTGAGCTCC...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGAGTGAAGCAGTCCTCTaGGTCCTTGACATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRSEAVL*VLDILA
Trigger: GGCCAGGATGTCAAGGACCCAGAGGACTGCTTCACT...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGGAGAAGAAGTACTTCTaGATGATGTCCGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: PTARRGRLGAASPEPAGEEKKYF*MMSEST
Trigger: TGTGCTCTCGGACATCATCCAGAAGTACTTCTTCTC...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGAGAAGAAGTACTTCTaGATGATGTCCGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQEKKYF*MMSEST
Trigger: TGTGCTCTCGGACATCATCCAGAAGTACTTCTTCTC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAAGGAGATGGAGGAGCTaGAGGGTGGGCCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGRRWRS*RVGQGV
Trigger: GACCCCTTGGCCCACCCTCCAGCTCCTCCATCTCCT...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGACCCCCGCACCTaGAGGTTATCGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSSDPRT*RLSLVA
Trigger: AGCCACCAGCGATAACCTCCAGGTGCGGGGGTCTGA...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCCTTTTCAGTGTGTCCTaGCCAGCCAGGCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSILFSVS*PARPRL
Trigger: GAGCCTCGGCCTGGCTGGCCAGGACACACTGAAAAG...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCTTTTCAGTGTGTCCTaGCCAGCCAGGCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSLFSVS*PARPRL
Trigger: GAGCCTCGGCCTGGCTGGCCAGGACACACTGAAAAG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCAAGAACCCCATCCTTaGGGGGCCGGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFQEPHP*GAGRER
Trigger: CCTTTCCCTGCCGGCCCCCCAAGGATGGGGTTCTTG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGAACACAGGGGGAAAATaGGACCTTGGAGACAATAGG +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLNTGGK*DLGDNR
Trigger: CCTATTGTCTCCAAGGTCCCATTTTCCCCCTGTGTT...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTATGCCAGGCCGTGAATaGGGCTTGCACCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLMPGRE*GLHPCV
Trigger: GACACAAGGGTGCAAGCCCCATTCACGGCCTGGCAT...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAACTCCTCCGCGTATaGTCCAGAGAGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTKLLRV*SREPWE
Trigger: CTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCTTTTCACAAGACCTATaGGACCACCTGGATCTTGCC +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRFSQDL*DHLDLA
Trigger: GGCAAGATCCAGGTGGTCCCATAGGTCTTGTGAAAA...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTATGGGAGAGCTGGAATaGGGCAGCCAAGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFMGELE*GSQAPA
Trigger: GGCAGGGGCTTGGCTGCCCCATTCCAGCTCTCCCAT...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGGGCATGGGTTGGGTCTaGGGTTGCCACCAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGGMGWV*GCHQGN
Trigger: GTTCCCTTGGTGGCAACCCCAGACCCAACCCATGCC...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTGGGGTGGAAGGGACTaGGGACATACAAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRWGGRD*GHTRRW
Trigger: CCAACGCCTTGTATGTCCTCAGTCCCTTCCACCCCA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGATCTTCCCTGCGGACCTaGGGGTCTGCTGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGSSLRT*GSADRG
Trigger: GCCTCTATCAGCAGACCCTCAGGTCCGCAGGGAAGA...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACGGGTGAGGCTGAGATaGTTCATTGCTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPRVRLR*FIALGP
Trigger: TGGTCCCAGAGCAATGAATCATCTCAGCCTCACCCG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCATGATTTGGCCAGCTTaGAGACCCGCAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIMIWPA*RPAAGG
Trigger: TCCGCCTGCTGCGGGTCTTCAAGCTGGCCAAATCAT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCGCGAGGCAGCAGGCCTaGGTCGCTGTCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCARQQA*VAVPQL
Trigger: GAGCTGAGGGACAGCGACTCAGGCCTGCTGCCTCGC...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCTCCCTCTGTCTGGTTaGTGCACCTCCCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVLPLSG*CTSQTS
Trigger: GGAAGTTTGGGAGGTGCATCAACCAGACAGAGGGAG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCTCCCTCTGTCTGGTTaGTGCACCTCCCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLLPLSG*CTSQTS
Trigger: GGAAGTTTGGGAGGTGCATCAACCAGACAGAGGGAG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGGTTGTATTCCCACTaGGGCTGCTCTTCATACCCC +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGRLYSH*GCSSYP
Trigger: GGGGTATGAAGAGCAGCCTCAGTGGGAATACAACCT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCAGGTTGTATTCCCACTaGGGCTGCTCTTCATACCCC +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSRLYSH*GCSSYP
Trigger: GGGGTATGAAGAGCAGCCTCAGTGGGAATACAACCT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGTATTCCAGCTGTTGGTaGAGTAGTAGTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTYSSCW*SSSGAG
Trigger: CCCTGCGCCACTACTACTTCACCAACAGCTGGAATA...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTGCCAGCCTCCCACTTaGCATAAGCGAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRCQPPT*HKRSWP
Trigger: TGGCCAACTTCGCTTATGTCAAGTGGGAGGCTGGCA...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGAATACTCAATAAACTaGGTGGCCTCTGGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: SPPTARRGRLGAASPEPAEYSIN*VASGSN
Trigger: ATTTGACCCAGAGGCCACTCAGTTTATTGAGTATTC...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTAATAGGGGGCCAGAGTaGGCCCCGTGGACAAGAACC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFNRGPE*APWTRT
Trigger: GGTTCTTGTCCACGGGGCTCACTCTGGCCCCCTATT...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAGGATTGTCAGCAGCTaGAGAGGTCCTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPRIVSS*RGPGGD
Trigger: ATCACCCCCAGGACCTCTTCAGCTGCTGACAATCCT...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGAGAGCACAGTGCCTGTaGAGATGGCCACAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVRAQCL*RWPQRA
Trigger: TGCTCTTTGTGGCCATCTTCACAGGCACTGTGCTCT...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTGCGGAAGCTGCTGGTaGCCCGAGGTAATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRCGSCW*PEVIGS
Trigger: ACTTCCTATTACCTCGGGGCACCAGCAGCTTCCGCA...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAGCGCTTCTCGATGGCTaGCAGGGACTCCCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGALLDG*QGLPCE
Trigger: TTCACACGGGAGTCCCTGGCAGCCATCGAGAAGCGC...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAGCGGGCTTGCTTCTCTaGCATGCGCTTCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGAGLLL*HALLDG
Trigger: GCCATCGAGAAGCGCATGGCAGAGAAGCAAGCCCGC...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTTGCGCACGCACTTGTaGCTTAGGTTGCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCLRTHL*LRLPMK
Trigger: CTTCATGGGCAACCTAAGGCACAAGTGCGTGCGCAA...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCATTGCGCACGCACTTGTaGCTTAGGTTGCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPLRTHL*LRLPMK
Trigger: CTTCATGGGCAACCTAAGGCACAAGTGCGTGCGCAA...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGCATCAGGCGGAAGAGTaGAAGAAAGGCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVHQAEE*KKGPGK
Trigger: TTTGCCTGGGCCTTTCTTGCACTCTTCCGCCTGATG...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCCATGTAGATCTTCCCTaGGGACCTGAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTHVDLP*GPEGLL
Trigger: CAGCAGACCCTCAGGTCCGCAGGGAAGATCTACATG...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCATGTAGATCTTCCCTaGGGACCTGAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVHVDLP*GPEGLL
Trigger: CAGCAGACCCTCAGGTCCGCAGGGAAGATCTACATG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGTCCGTTTTCTCCTCTTaGTTCTTCTCTCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLSVFSS*FFSHGC
Trigger: ACAGCCATGAGAGAAGAAGCAAGAGGAGAAAACGGA...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGCTCTCCCCCGCTGTaGTGTTTTCATCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTRSPPL*CFHHLQ
Trigger: TTGCAGATGATGAAAACAGCACAGCGGGGGAGAGCG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGCATTGCAGTCCACAGTaGTGTTCTTTTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVHCSPQ*CSFCHG
Trigger: TCCATGGCAAAAAGAACAGCACTGTGGACTGCAATG...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAACCAACTTCACTCCCTaGTTGATGGACATCCACAGC +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSTNFTP*LMDIHS
Trigger: GCTGTGGATGTCCATCAAGCAGGGAGTGAAGTTGGT...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAACCAGGTTTCCGACCTaGAGCATCTCCTCGAATTCA +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSTRFPT*SISSNS
Trigger: TGAATTCGAGGAGATGCTGCAGGTCGGAAACCTGGT...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCGACAAGTTGCTCATaGGGGACAGGCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFPTSCS*GTGPAP
Trigger: TGGAGCTGGGCCTGTCCCGCATGAGCAACTTGTCGG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGCAGCACCGACAAGTTaGTCATGCGGGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFAAPTS*SCGTGP
Trigger: TGGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTAAGAAGTCCATCATGTaGCAGCGAGGCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPKKSIM*QRGSRP
Trigger: AGGCCTGCTGCCTCGCTGGCACATGATGGACTTCTT...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAGCAGGCATAATGACTaGCCCGACACCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPSRHND*PDTSMQ
Trigger: CTGCATGGAGGTGTCGGGGCAGTCATTATGCCTGCT...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCCAAACCGTGTTTCCTTaGGGGTGGGAGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTQTVFP*GWEAPS
Trigger: AGAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTG...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTGGACTCCTCCTCCGTaGCCAGGCTGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSWTPPP*PGCSPH
Trigger: ATGAGGAGAACAGCCTGGGCACGGAGGAGGAGTCCA...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCATCATGTCTGCTGTGCTaGCCTCGGAGCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPSCLLC*PRSNCP
Trigger: AGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGA...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVWSCLL*CPRSNC
Trigger: ACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCA...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGTTAAATGTTGCCACCTaGAGAAGGGCCAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAELNVAT*RRARYP
Trigger: CGGGTACCTGGCCCTTCTGCAGGTGGCAACATTTAA...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCTTAAATGTTGCCACCTaGAGAAGGGCCAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSLNVAT*RRARYP
Trigger: CGGGTACCTGGCCCTTCTGCAGGTGGCAACATTTAA...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTTAAATGTTGCCACCTaGAGAAGGGCCAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHLNVAT*RRARYP
Trigger: CGGGTACCTGGCCCTTCTGCAGGTGGCAACATTTAA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGTTAAATGTTGCCACCTaGAGAAGGGCCAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRLNVAT*RRARYP
Trigger: CGGGTACCTGGCCCTTCTGCAGGTGGCAACATTTAA...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCACCAGCCTTTAAATGTTaGCACCTGCAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPPAFKC*HLQKGQ
Trigger: CTGGCCCTTCTGCAGGTGGCAACATTTAAAGGCTGG...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCCAGCCTTTAAATGTTaGCACCTGCAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCPAFKC*HLQKGQ
Trigger: CTGGCCCTTCTGCAGGTGGCAACATTTAAAGGCTGG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAGTGACGTCAAAGGCCTaGTTGGTCACAATGTCGAAT +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPVTSKA*LVTMSN
Trigger: ATTCGACATTGTGACCAAGCAGGCCTTTGACGTCAC...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTGTCCATGCAATGGATaGGGTCCCCACTCACCATGG +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVCPCNG*GPHSPW
Trigger: CCATGGTGAGTGGGGACCGCATCCATTGCATGGACA...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTGTCCATGCAATGGATaGGGTCCCCACTCACCATGG +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPCPCNG*GPHSPW
Trigger: CCATGGTGAGTGGGGACCGCATCCATTGCATGGACA...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTGTCCATGCAATGGATaGGGTCCCCACTCACCATGG +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRCPCNG*GPHSPW
Trigger: CCATGGTGAGTGGGGACCGCATCCATTGCATGGACA...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCACAAAGAGAATGTCCATaGAATGGATGCGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGAQRECP*NGCGPH
Trigger: GTGGGGACCGCATCCATTGCATGGACATTCTCTTTG...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCTGCTTCAAAGAGCGTTaGAGCAGGTGCCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTCFKER*SRCLRK
Trigger: CTTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCA...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGACTGGATTCCACTTCTaGTTTGAGAACAGACTTCCG +
Preference number: 4 (lower is better)
Translates to: QAQANCSGCPRGATELCLTGFHF*FENRLP
Trigger: CGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGT...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCAAGGACAAGCTGCATaGCAGGCCGTGAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGQGQAA*QAVNGA
Trigger: AGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGCCCCTCTCTCAAAGGTaGCATGGTTCATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVPLSQR*HGSFPS
Trigger: AGAGGGGAATGAACCATGGCACCTTTGAGAGAGGGG...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCATCTGTCCTTCCCTCCTaGTGGTCATTGTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSSVLPS*WSLCSS
Trigger: AGAACTGCACAATGACCAGCAGGAGGGAAGGACAGA...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCTCATCCTGCTTCTaGGCACAGGCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPFSSCF*AQALLT
Trigger: CGTGAGGAGAGCCTGTGCCCAGAAGCAGGATGAGAA...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGAGCAGGTAATTTTCTaGATCACTGAGGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SPPTARRGRLGAASPEPAEQVIF*ITEVKV
Trigger: GACCTTTACCTCAGTGATCCAGAAAATTACCTGCTC...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCACAAAGGAATCGAAGCTaGTGTAGCCGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPQRNRS*CSRGRG
Trigger: ACCCCGACCACGGCTACACCAGCTTCGATTCCTTTG...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCAAAGGAATCGAAGCTaGTGTAGCCGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLQRNRS*CSRGRG
Trigger: ACCCCGACCACGGCTACACCAGCTTCGATTCCTTTG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACCTCATGGCTGTTTACTaGGGCCAAAGGGGACATCTC +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHLMAVY*GQRGHL
Trigger: GAGATGTCCCCTTTGGCCCCAGTAAACAGCCATGAG...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTAGCAGTGATGTGTGGTaGCTCTCGCTCTCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFSSDVW*LSLSPA
Trigger: AGCGGGGGAGAGCGAGAGCCACCACACATCACTGCT...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCTGTTCTTTTTGCCATaGAGGGCGTGGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGLFFLP*RAWPGA
Trigger: GGCTCCTGGCCACGCCCTCCATGGCAAAAAGAACAG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCTGTTCTTTTTGCCATaGAGGGCGTGGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSLFFLP*RAWPGA
Trigger: GGCTCCTGGCCACGCCCTCCATGGCAAAAAGAACAG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCTGTTCTTTTTGCCATaGAGGGCGTGGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRLFFLP*RAWPGA
Trigger: GGCTCCTGGCCACGCCCTCCATGGCAAAAAGAACAG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATTCTACACACGGAGCCTaGGAGGTCAGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHSTHGA*EVSIWG
Trigger: GCCCCAGATGCTGACCTCCCAGGCTCCGTGTGTAGA...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCGAGACGGTTCCAGCATaGTGGACACTTGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVETVPA*WTLVAR
Trigger: TCTCGCCACAAGTGTCCACCATGCTGGAACCGTCTC...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCGGGCCAGGGCCAGCTaGAGGTTGTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFRARAS*RLFISL
Trigger: CAGAGAGATGAACAACCTCCAGCTGGCCCTGGCCCG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGACGGGCCAGGGCCAGCTaGAGGTTGTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGRARAS*RLFISL
Trigger: CAGAGAGATGAACAACCTCCAGCTGGCCCTGGCCCG...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCCACACACACGGGCTCTaGATCCCCGGGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCHTHGL*IPGGAL
Trigger: CAGGGCACCCCCGGGGATCCAGAGCCCGTGTGTGTG...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCTCCTCATCTTCTTCTTaGTCATCTGTGTCTGACTCG +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGSSSSS*SSVSDS
Trigger: CGAGTCAGACACAGATGACCAAGAAGAAGATGAGGA...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACTCCTCATCTTCTTCTTaGTCATCTGTGTCTGACTCG +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHSSSSS*SSVSDS
Trigger: CGAGTCAGACACAGATGACCAAGAAGAAGATGAGGA...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTTCCTCATCTTCTTCTTaGTCATCTGTGTCTGACTCG +
Preference number: 4 (lower is better)
Translates to: AQANCSGCPRGATELCLVSSSSS*SSVSDS
Trigger: CGAGTCAGACACAGATGACCAAGAAGAAGATGAGGA...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCATTCCTGCTGCTTGCTaGACTCCTCCTCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIIPAAC*TPPPCP
Trigger: TGGGCACGGAGGAGGAGTCCAGCAAGCAGCAGGAAT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATCCTGGCTCCAGGTCCTaGAATCCGGAGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNPGSRS*NPEGPL
Trigger: CAGAGGCCCCTCCGGATTCCAGGACCTGGAGCCAGG...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAGCAGTCGCTGACACCTaGCTCCAGGTCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGAVADT*LQVLES
Trigger: GGATTCCAGGACCTGGAGCCAGGTGTCAGCGACTGC...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGTGAAGCAGTCCTCTaGGTCCTTGACATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTSEAVL*VLDILA
Trigger: GGCCAGGATGTCAAGGACCCAGAGGACTGCTTCACT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCTCTTCATACCCCCTaGAGTCCACAGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHALHTP*SPQLHT
Trigger: TGTATGCAGCTGTGGACTCCAGGGGGTATGAAGAGC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTGAGAAGAAGTACTTCTaGATGATGTCCGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSEKKYF*MMSEST
Trigger: TGTGCTCTCGGACATCATCCAGAAGTACTTCTTCTC...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGAGAATGTCCATGCAATaGATGCGGTCCCCACTCACC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLRMSMQ*MRSPLT
Trigger: GGTGAGTGGGGACCGCATCCATTGCATGGACATTCT...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGAGAATGTCCATGCAATaGATGCGGTCCCCACTCACC +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRRMSMQ*MRSPLT
Trigger: GGTGAGTGGGGACCGCATCCATTGCATGGACATTCT...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCTGCGGAAGGCTCTCTaGATAACCATGGCCGACACC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRLRKAL*ITMADT
Trigger: GGTGTCGGCCATGGTTATCCAGAGAGCCTTCCGCAG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCTGCGGAAGGCTCTCTaGATAACCATGGCCGACACC +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSLRKAL*ITMADT
Trigger: GGTGTCGGCCATGGTTATCCAGAGAGCCTTCCGCAG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACTTTTCAGTGTGTCCTaGCCAGCCAGGCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGLFSVS*PARPRL
Trigger: GAGCCTCGGCCTGGCTGGCCAGGACACACTGAAAAG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGGCAGTGAAGACCTGTaGGAGCCACACTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLGSEDL*EPHWIP
Trigger: TGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCGGCAGTGAAGACCTGTaGGAGCCACACTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVGSEDL*EPHWIP
Trigger: TGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTGGTCCAGAGAGCCCTaGGAGATCGCCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRWSREP*EIASFL
Trigger: GAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGAAGAGGTCCTCTGTGTaGGTGCCATCAGGATCCCGG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRKRSSV*VPSGSR
Trigger: CCGGGATCCTGATGGCACCCACACAGAGGACCTCTT...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATGGCATGGGTTGGGTCTaGGGTTGCCACCAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHGMGWV*GCHQGN
Trigger: GTTCCCTTGGTGGCAACCCCAGACCCAACCCATGCC...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGGTCCTTCCCTCCTGCTaGTCATTGTGCAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVVLPSC*SLCSSG
Trigger: TCCAGAACTGCACAATGACCAGCAGGAGGGAAGGAC...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGTCCTTCCCTCCTGCTaGTCATTGTGCAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTVLPSC*SLCSSG
Trigger: TCCAGAACTGCACAATGACCAGCAGGAGGGAAGGAC...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGTCCTTCCCTCCTGCTaGTCATTGTGCAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGVLPSC*SLCSSG
Trigger: TCCAGAACTGCACAATGACCAGCAGGAGGGAAGGAC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTAGGCGTTGGTGGCACTaGACCGGAAGATGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFRRWWH*TGRWSC
Trigger: GCAAGACCATCTTCCGGTTCAGTGCCACCAACGCCT...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATTGGGGTGGAAGGGACTaGGGACATACAAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHWGGRD*GHTRRW
Trigger: CCAACGCCTTGTATGTCCTCAGTCCCTTCCACCCCA...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAAGGTGTAAATGGCGGTaGAGGTGTACTCGACATACT +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGARCKWR*RCTRHT
Trigger: AGTATGTCGAGTACACCTTCACCGCCATTTACACCT...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCTCGAGCCAGAATCTTaGCCAGAGACTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTLEPES*PETQRC
Trigger: ACACCTTTGAGTCTCTGGTCAAGATTCTGGCTCGAG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTCGAGCCAGAATCTTaGCCAGAGACTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRLEPES*PETQRC
Trigger: ACACCTTTGAGTCTCTGGTCAAGATTCTGGCTCGAG...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCCTCGTGTTCTTTCTTaGGCATTTCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTPRVLS*AFPWPP
Trigger: AGGAGGCCATGGAAATGCTCAAGAAAGAACACGAGG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCGGGTGAGGCTGAGATaGTTCATTGCTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGRVRLR*FIALGP
Trigger: TGGTCCCAGAGCAATGAATCATCTCAGCCTCACCCG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTTGCCGCCAGTCGGCCTaGGATGCACTGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCCRQSA*DALASA
Trigger: GGCCGAGGCCAGTGCATCTCAGGCCGACTGGCGGCA...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGACTCAAGCAGAACCTTaGTGGTCTTCCGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRTQAEP*WSSAPL
Trigger: TAGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGT...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACACTCAAGCAGAACCTTaGTGGTCTTCCGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHTQAEP*WSSAPL
Trigger: TAGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGT...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCATGCCCTCAAATCGTaGCAGAGCTCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSHALKS*QSSQRT
Trigger: CGTCCTCTGAGAGCTCTGTCACGATTTGAGGGCATG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCAGGTTGTATTCCCACTaGGGCTGCTCTTCATACCCC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVRLYSH*GCSSYP
Trigger: GGGGTATGAAGAGCAGCCTCAGTGGGAATACAACCT...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCTCACAATGTCGAATATaGAGCCCTGGTACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRSQCRI*SPGTCS
Trigger: TGAACAAGTACCAGGGCTTCATATTCGACATTGTGA...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGTCTTGGCCAAGATGTTaGTTTTCTCAGGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: RRGRLGAASPEPAGETEVSWPRC*FSQDFG
Trigger: ACCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGA...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACTCTTGGCCAAGATGTTaGTTTTCTCAGGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHSWPRC*FSQDFG
Trigger: ACCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGA...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTAGAAGTACTTCTGGATaGTGTCCGAGAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCRSTSG*CPRAQC
Trigger: GCACTGTGCTCTCGGACATCATCCAGAAGTACTTCT...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACAGAAGTACTTCTGGATaGTGTCCGAGAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHRSTSG*CPRAQC
Trigger: GCACTGTGCTCTCGGACATCATCCAGAAGTACTTCT...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACGAATACTCAATAAACTaGGTGGCCTCTGGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHEYSIN*VASGSN
Trigger: ATTTGACCCAGAGGCCACTCAGTTTATTGAGTATTC...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGCCAGGACCCTTTTGGTaGAGGCAAAGAGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVPGPFW*RQRECP
Trigger: TGGACATTCTCTTTGCCTTCACCAAAAGGGTCCTGG...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCAGAACTCTGCCTGGTTaGTCCGCGGGGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCRTLPG*SAGLRP
Trigger: GGGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCT...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPIPLLL*EQTSGC
Trigger: GCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAAT...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSIPLLL*EQTSGC
Trigger: GCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAAT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCCTGTTACCTCAGGGTaGCAGTTCTCTATGTTAAAA +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRPVTSG*QFSMLK
Trigger: TTTTAACATAGAGAACTGTCACCCTGAGGTAACAGG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGACAACATCTGGCACTTaGTGTCTGTCCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTTTSGT*CLSFPP
Trigger: AGGAGGGAAGGACAGACATCAAGTGCCAGATGTTGT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCCATCAGGCGGAAGAGTaGAAGAAAGGCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTHQAEE*KKGPGK
Trigger: TTTGCCTGGGCCTTTCTTGCACTCTTCCGCCTGATG...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCACATCAGGCGGAAGAGTaGAAGAAAGGCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPHQAEE*KKGPGK
Trigger: TTTGCCTGGGCCTTTCTTGCACTCTTCCGCCTGATG...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCATGTAGATCTTCCCTaGGGACCTGAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRHVDLP*GPEGLL
Trigger: CAGCAGACCCTCAGGTCCGCAGGGAAGATCTACATG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACGCTCTCCCCCGCTGTaGTGTTTTCATCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPRSPPL*CFHHLQ
Trigger: TTGCAGATGATGAAAACAGCACAGCGGGGGAGAGCG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGAGGGCCCGCTGCCGTaGTCCTGGCTCCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSEGPLP*SWLLEA
Trigger: GGCTTCGAGGAGCCAGGAGCACGGCAGCGGGCCCTC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGGTGAGGACGCTGACTaGGCTGAGGGCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSGEDAD*AEGPLP
Trigger: CGGCAGCGGGCCCTCAGCGCAGTCAGCGTCCTCACC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGACCAACTTCACTCCCTaGTTGATGGACATCCACAGC +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRTNFTP*LMDIHS
Trigger: GCTGTGGATGTCCATCAAGCAGGGAGTGAAGTTGGT...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTAGCAGGCATAATGACTaGCCCGACACCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSSRHND*PDTSMQ
Trigger: CTGCATGGAGGTGTCGGGGCAGTCATTATGCCTGCT...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCAAACCGTGTTTCCTTaGGGGTGGGAGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSQTVFP*GWEAPS
Trigger: AGAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGATGTGGTAGCAGGTCTTaGGCAACCGCCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGCGSRS*ATATRP
Trigger: AGGTCTGGTGGCGGTTGCGCAAGACCTGCTACCACA...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGCCAGCCTTTAAATGTTaGCACCTGCAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRPAFKC*HLQKGQ
Trigger: CTGGCCCTTCTGCAGGTGGCAACATTTAAAGGCTGG...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGCAAAGAGAATGTCCATaGAATGGATGCGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLQRECP*NGCGPH
Trigger: GTGGGGACCGCATCCATTGCATGGACATTCTCTTTG...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTGCTTCAAAGAGCGTTaGAGCAGGTGCCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRCFKER*SRCLRK
Trigger: CTTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGCTTCGGAGAGGCCGCTaGCCGCCTGCTGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRLRRGR*PPADGR
Trigger: TCTTCCGTCAGCAGGCGGGCAGCGGCCTCTCCGAAG...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAAGAGACAGCGTGAATTaGTGCCCATGTCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: PLRARELGLTIPFPAQGARDSVN*CPCPWK
Trigger: TTTCCATGGACATGGGCAGCAATTCACGCTGTCTCT...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGTCTGTCCTTCCCTCCTaGTGGTCATTGTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAESVLPS*WSLCSS
Trigger: AGAACTGCACAATGACCAGCAGGAGGGAAGGACAGA...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGGATGAGCTCTTGGGGTaGATTGCCATAGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEDELLG*IAIEIW
Trigger: CCAGATCTCTATGGCAATCCACCCCAAGAGCTCATC...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGAGCAGGTAATTTTCTaGATCACTGAGGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIREQVIF*ITEVKV
Trigger: GACCTTTACCTCAGTGATCCAGAAAATTACCTGCTC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTCGGTCTCAGCGATGGTaGCTTGGTTTTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPRSQRW*LGFAPH
Trigger: ATGAGGAGCAAAACCAAGCCACCATCGCTGAGACCG...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGCGGTCTCAGCGATGGTaGCTTGGTTTTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRRSQRW*LGFAPH
Trigger: ATGAGGAGCAAAACCAAGCCACCATCGCTGAGACCG...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCTCATGGCTGTTTACTaGGGCCAAAGGGGACATCTC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVLMAVY*GQRGHL
Trigger: GAGATGTCCCCTTTGGCCCCAGTAAACAGCCATGAG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATTGCTTCTTCTCTCATaGCTGTTTACTGGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPLLLLS*LFTGAK
Trigger: TTTGGCCCCAGTAAACAGCCATGAGAGAAGAAGCAA...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCTTCTGAGTCAGACTTaGGGAGCCTGTCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFLLSQT*GACPPH
Trigger: GTGGGGAGGACAGGCTCCCCAAGTCTGACTCAGAAG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGACTTCTGAGTCAGACTTaGGGAGCCTGTCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGLLSQT*GACPPH
Trigger: GTGGGGAGGACAGGCTCCCCAAGTCTGACTCAGAAG...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTTGCCATGGAGGGCGTaGCCAGGAGCCGAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCLPWRA*PGAEVP
Trigger: CGGAACCTCGGCTCCTGGCCACGCCCTCCATGGCAA...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGTTGCCATGGAGGGCGTaGCCAGGAGCCGAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRLPWRA*PGAEVP
Trigger: CGGAACCTCGGCTCCTGGCCACGCCCTCCATGGCAA...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGCATGGTGGACACTTGTaGCGAGACTCCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGHGGHL*RDSSNS
Trigger: AGAGTTAGAGGAGTCTCGCCACAAGTGTCCACCATG...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCATGGTGGACACTTGTaGCGAGACTCCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTHGGHL*RDSSNS
Trigger: AGAGTTAGAGGAGTCTCGCCACAAGTGTCCACCATG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGTGTTTCCTTGCGGGTaGGAGGCACCTTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFVFPCG*EAPSPS
Trigger: AGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACAC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGCTCTTCATACCCCCTaGAGTCCACAGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRALHTP*SPQLHT
Trigger: TGTATGCAGCTGTGGACTCCAGGGGGTATGAAGAGC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGTCGAATATGAAGCCCTaGTACTTGTTCAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTSNMKP*YLFRGR
Trigger: ACGGCCCCTGAACAAGTACCAGGGCTTCATATTCGA...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTCGAATATGAAGCCCTaGTACTTGTTCAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHSNMKP*YLFRGR
Trigger: ACGGCCCCTGAACAAGTACCAGGGCTTCATATTCGA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGTCGAATATGAAGCCCTaGTACTTGTTCAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: QEQGQAACQAVNGACTLVSNMKP*YLFRGR
Trigger: ACGGCCCCTGAACAAGTACCAGGGCTTCATATTCGA...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGTTGATGAGGCTTATCTaGTTGGGCTTGGCGATACGG +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTLMRLI*LGLAIR
Trigger: CCGTATCGCCAAGCCCAACCAGATAAGCCTCATCAA...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCTTGATGAGGCTTATCTaGTTGGGCTTGGCGATACGG +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSLMRLI*LGLAIR
Trigger: CCGTATCGCCAAGCCCAACCAGATAAGCCTCATCAA...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGAATGTCCATGCAATaGATGCGGTCCCCACTCACC +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTRMSMQ*MRSPLT
Trigger: GGTGAGTGGGGACCGCATCCATTGCATGGACATTCT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCAGAATGTCCATGCAATaGATGCGGTCCCCACTCACC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVRMSMQ*MRSPLT
Trigger: GGTGAGTGGGGACCGCATCCATTGCATGGACATTCT...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCAACTTCTCCTCCATCTaGATCTTCAGGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPNFSSI*IFRASI
Trigger: GATGGACGCCCTGAAGATCCAGATGGAGGAGAAGTT...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATAGGAGATGGAGGAGCTaGAGGGTGGGCCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNRRWRS*RVGQGV
Trigger: GACCCCTTGGCCCACCCTCCAGCTCCTCCATCTCCT...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACTGTCATAGGAGGGTaGGAAGGAAGTGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSTVIGG*EGSGGD
Trigger: ATCTCCTCCACTTCCTTCCCACCCTCCTATGACAGT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGTTTCGCCTCAGCAGCTaGGATGAAGTTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRFRLSS*DEVAFQ
Trigger: CTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAA...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGGGCAGTGAAGACCTGTaGGAGCCACACTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGGSEDL*EPHWIP
Trigger: TGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAAACACAGGGGGAAAATaGGACCTTGGAGACAATAGG +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSNTGGK*DLGDNR
Trigger: CCTATTGTCTCCAAGGTCCCATTTTCCCCCTGTGTT...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATTGGTCCAGAGAGCCCTaGGAGATCGCCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHWSREP*EIASFL
Trigger: GAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCA...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTAACCGTGTCCCACACTaGACTCAAAGGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPNRVPH*TQREHR
Trigger: CCTGTGTTCCCTTTGAGTCCAGTGTGGGACACGGTT...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTAATAGGATTTCCACTTaGAGAAATGTCGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSNRIST*RNVAGT
Trigger: TGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATT...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCAATAGGATTTCCACTTaGAGAAATGTCGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRNRIST*RNVAGT
Trigger: TGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CAA 72 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATaGCCTGACCAGACCAGGTCACAGGTCTATCTGAGG +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRA*PDQTRSQVYLR
Trigger: CCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGATGTTGAAGAGCGAGTaGACCAGAATCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLMLKSE*TRIFTA
Trigger: GGCTGTGAAGATTCTGGTTCACTCGCTCTTCAACAT...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGATGTTGAAGAGCGAGTaGACCAGAATCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGMLKSE*TRIFTA
Trigger: GGCTGTGAAGATTCTGGTTCACTCGCTCTTCAACAT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGAGGTGTAAATGGCGGTaGAGGTGTACTCGACATACT +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAERCKWR*RCTRHT
Trigger: AGTATGTCGAGTACACCTTCACCGCCATTTACACCT...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCTCGAGCCAGAATCTTaGCCAGAGACTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVLEPES*PETQRC
Trigger: ACACCTTTGAGTCTCTGGTCAAGATTCTGGCTCGAG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCAGAGGTGCCGTTCTTaGGCAGGTAATTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTQRCRS*AGNFLD
Trigger: ATCCAGAAAATTACCTGCTCAAGAACGGCACCTCTG...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCAGAGGTGCCGTTCTTaGGCAGGTAATTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCQRCRS*AGNFLD
Trigger: ATCCAGAAAATTACCTGCTCAAGAACGGCACCTCTG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCCCTCGTGTTCTTTCTTaGGCATTTCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTPRVLS*AFPWPP
Trigger: AGGAGGCCATGGAAATGCTCAAGAAAGAACACGAGG...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGCCTCGTGTTCTTTCTTaGGCATTTCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRPRVLS*AFPWPP
Trigger: AGGAGGCCATGGAAATGCTCAAGAAAGAACACGAGG...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCCTCGTGTTCTTTCTTaGGCATTTCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLPRVLS*AFPWPP
Trigger: AGGAGGCCATGGAAATGCTCAAGAAAGAACACGAGG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGACACTCCTCAGTTCCTaGAGACATCCGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTTLLSS*RHPFSP
Trigger: AGGAGAAAACGGATGTCTTCAGGAACTGAGGAGTGT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGACACTCCTCAGTTCCTaGAGACATCCGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGTLLSS*RHPFSP
Trigger: AGGAGAAAACGGATGTCTTCAGGAACTGAGGAGTGT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTTCTGGGACCATCTTCTaGGTCAGACTTGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFSGTIF*VRLGEP
Trigger: AGGCTCCCCAAGTCTGACTCAGAAGATGGTCCCAGA...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGACGCAGCGTCCGCAGTaGCTTGATGGGGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRTQRPQ*LDGAHL
Trigger: GAGATGGGCCCCATCAAGTCACTGCGGACGCTGCGT...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACTCCCTCTGTCTGGTTaGTGCACCTCCCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGLPLSG*CTSQTS
Trigger: GGAAGTTTGGGAGGTGCATCAACCAGACAGAGGGAG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGCCACGTTGTCAAAGTTaGCTTTCACCTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVPRCQS*LSPWSS
Trigger: ACTGGACCAAGGTGAAAGTCAACTTTGACAACGTGG...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCCCACGTTGTCAAAGTTaGCTTTCACCTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSPRCQS*LSPWSS
Trigger: ACTGGACCAAGGTGAAAGTCAACTTTGACAACGTGG...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGAGAAGTACTTCTGGATaGTGTCCGAGAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRRSTSG*CPRAQC
Trigger: GCACTGTGCTCTCGGACATCATCCAGAAGTACTTCT...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCCAGGACCCTTTTGGTaGAGGCAAAGAGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLPGPFW*RQRECP
Trigger: TGGACATTCTCTTTGCCTTCACCAAAAGGGTCCTGG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVIPLLL*EQTSGC
Trigger: GCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAAT...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCATTCCACTTCTGCTTTaGGAACAGACTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTIPLLL*EQTSGC
Trigger: GCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAAT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCACCTGTTACCTCAGGGTaGCAGTTCTCTATGTTAAAA +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPPVTSG*QFSMLK
Trigger: TTTTAACATAGAGAACTGTCACCCTGAGGTAACAGG...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGATGCGGAAGCTGCTGGTaGCCCGAGGTAATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGCGSCW*PEVIGS
Trigger: ACTTCCTATTACCTCGGGGCACCAGCAGCTTCCGCA...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGGCTCTTGGGGTGGATTaGCATAGAGATCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGALGVD*HRDLAA
Trigger: AGCTGCCAGATCTCTATGGCAATCCACCCCAAGAGC...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTTGCGCACGCACTTGTaGCTTAGGTTGCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSILRTHL*LRLPMK
Trigger: CTTCATGGGCAACCTAAGGCACAAGTGCGTGCGCAA...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCATGTAGATCTTCCCTaGGGACCTGAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFHVDLP*GPEGLL
Trigger: CAGCAGACCCTCAGGTCCGCAGGGAAGATCTACATG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTACCAACTTCACTCCCTaGTTGATGGACATCCACAGC +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPTNFTP*LMDIHS
Trigger: GCTGTGGATGTCCATCAAGCAGGGAGTGAAGTTGGT...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACCAGGTTTCCGACCTaGAGCATCTCCTCGAATTCA +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTTRFPT*SISSNS
Trigger: TGAATTCGAGGAGATGCTGCAGGTCGGAAACCTGGT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCACTTGAAGGTCATCTCTaGTGTGAAAATCCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPLEGHL*CENPCE
Trigger: TTCACAGGGATTTTCACAGCAGAGATGACCTTCAAG...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCAAACCGTGTTTCCTTaGGGGTGGGAGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHQTVFP*GWEAPS
Trigger: AGAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTG...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGATCATGTCTGCTGTGCTaGCCTCGGAGCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGSCLLC*PRSNCP
Trigger: AGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGA...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFWSCLL*CPRSNC
Trigger: ACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCA...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGTGACGTCAAAGGCCTaGTTGGTCACAATGTCGAAT +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLVTSKA*LVTMSN
Trigger: ATTCGACATTGTGACCAAGCAGGCCTTTGACGTCAC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGTGACGTCAAAGGCCTaGTTGGTCACAATGTCGAAT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRVTSKA*LVTMSN
Trigger: ATTCGACATTGTGACCAAGCAGGCCTTTGACGTCAC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCCGACACCTCTTCGTaGTTGCGCCGGAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRADTSS*LRRSVV
Trigger: CACCACACTCCGGCGCAAGCACGAAGAGGTGTCGGC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGAGACAGCGTGAATTaGTGCCCATGTCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGRDSVN*CPCPWK
Trigger: TTTCCATGGACATGGGCAGCAATTCACGCTGTCTCT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGAACAGACTTCCGGCTaGTCCATAGACACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHEQTSG*SIDTLV
Trigger: AACAAGAGTGTCTATGGAGCAGCCGGAAGTCTGTTC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCCCCCTCTCTCAAAGGTaGCATGGTTCATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIPLSQR*HGSFPS
Trigger: AGAGGGGAATGAACCATGGCACCTTTGAGAGAGGGG...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCTCTGTCCTTCCCTCCTaGTGGTCATTGTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTSVLPS*WSLCSS
Trigger: AGAACTGCACAATGACCAGCAGGAGGGAAGGACAGA...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTAAGTTTGGTGAGAAGTaGTCGATTAGTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSKFGEK*SISSDN
Trigger: GTTGTCTGAACTAATCGAGCACTTCTCACCAAACTT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAATTGCCATAGAGATCTaGCAGCTTTTTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPIAIEI*QLFGGL
Trigger: CAGGCCTCCAAAAAGCTGCCAGATCTCTATGGCAAT...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACCTCGGTCTCAGCGATaGTGGCTTGGTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGPRSQR*WLGFAP
Trigger: AGGAGCAAAACCAAGCCACCATCGCTGAGACCGAGG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCCGAGGTTCCGGGACTaGGCTGTCCCTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSPRFRD*AVPGHW
Trigger: CCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGG...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTGCCTGGCTCCTCCGATaGCGTGGTCGTGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCAWLLR*RGRVWR
Trigger: CCGCCAGACACGACCACGCCATCGGAGGAGCCAGGC...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAAAGCGCAGGCCCCTCTaGATGCGGGCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRKRRPL*MRARAS
Trigger: GCTGGCCCTGGCCCGCATCCAGAGGGGCCTGCGCTT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCATGCAGCTGGGCAGCTaGCCCTGGGCGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSMQLGS*PWAARA
Trigger: AGCCCTTGCCGCCCAGGGCCAGCTGCCCAGCTGCAT...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGGGTGGCAATGCAGCTaGGCAGCTGGCCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRGWQCS*AAGPGR
Trigger: CCGCCCAGGGCCAGCTGCCCAGCTGCATTGCCACCC...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTCACACACACGGGCTCTaGATCCCCGGGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCHTHGL*IPGGAL
Trigger: CAGGGCACCCCCGGGGATCCAGAGCCCGTGTGTGTG...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATGCAGTCGCTGACACCTaGCTCCAGGTCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNAVADT*LQVLES
Trigger: GGATTCCAGGACCTGGAGCCAGGTGTCAGCGACTGC...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCTCTTGTTGTTCACGATaGTGTAGTTCAAAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGSCCSR*CSSKAS
Trigger: ACTTGCCTTTGAACTACACCATCGTGAACAACAAGA...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCGAATATGAAGCCCTaGTACTTGTTCAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRSNMKP*YLFRGR
Trigger: ACGGCCCCTGAACAAGTACCAGGGCTTCATATTCGA...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTTGATGAGGCTTATCTaGTTGGGCTTGGCGATACGG +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRLMRLI*LGLAIR
Trigger: CCGTATCGCCAAGCCCAACCAGATAAGCCTCATCAA...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGTTTTCACAAGACCTATaGGACCACCTGGATCTTGCC +
Preference number: 4 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTFSQDL*DHLDLA
Trigger: GGCAAGATCCAGGTGGTCCCATAGGTCTTGTGAAAA...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTTTTCACAAGACCTATaGGACCACCTGGATCTTGCC +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLFSQDL*DHLDLA
Trigger: GGCAAGATCCAGGTGGTCCCATAGGTCTTGTGAAAA...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTGAGGCATGCGCCCGGTaGAGGGGCTCCATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCEACAR*RGSMGE
Trigger: CTCTCCCATGGAGCCCCTCCACCGGGCGCATGCCTC...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTAACCGTGTCCCACACTaGACTCAAAGGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSNRVPH*TQREHR
Trigger: CCTGTGTTCCCTTTGAGTCCAGTGTGGGACACGGTT...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTCCAGGGACTCCCGTGTaGACCTGCGGAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCPGTPV*TCGSCW
Trigger: CCAGCAGCTTCCGCAGGTTCACACGGGAGTCCCTGG...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATAGGCGTTGGTGGCACTaGACCGGAAGATGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNRRWWH*TGRWSC
Trigger: GCAAGACCATCTTCCGGTTCAGTGCCACCAACGCCT...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTAGGTGTAAATGGCGGTaGAGGTGTACTCGACATACT +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPRCKWR*RCTRHT
Trigger: AGTATGTCGAGTACACCTTCACCGCCATTTACACCT...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTGTAAATGGCGGTaGAGGTGTACTCGACATACT +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTRCKWR*RCTRHT
Trigger: AGTATGTCGAGTACACCTTCACCGCCATTTACACCT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCAGAGGTGCCGTTCTTaGGCAGGTAATTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVQRCRS*AGNFLD
Trigger: ATCCAGAAAATTACCTGCTCAAGAACGGCACCTCTG...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATTTGGTCATCTGTGTCTaGCTCGGCCACAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNLVICV*LGHSDG
Trigger: CCCATCGCTGTGGCCGAGTCAGACACAGATGACCAA...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGATATTCCAGCTGTTGGTaGAGTAGTAGTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGYSSCW*SSSGAG
Trigger: CCCTGCGCCACTACTACTTCACCAACAGCTGGAATA...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGAATACTCAATAAACTaGGTGGCCTCTGGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSEYSIN*VASGSN
Trigger: ATTTGACCCAGAGGCCACTCAGTTTATTGAGTATTC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCCCAGGACCCTTTTGGTaGAGGCAAAGAGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIPGPFW*RQRECP
Trigger: TGGACATTCTCTTTGCCTTCACCAAAAGGGTCCTGG...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCCGGAGTGTGGTGGTaGTGGGCTCGTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRAGVWW*WARRRS
Trigger: AGATCTCCTACGAGCCCATCACCACCACACTCCGGC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGAATAGGGGGCCAGAGTaGGCCCCGTGGACAAGAACC +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRNRGPE*APWTRT
Trigger: GGTTCTTGTCCACGGGGCTCACTCTGGCCCCCTATT...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTGCCTGTGGGGAAGCTaGTGGTCCCCCGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAACLWGS*WSPGRA
Trigger: GGCCCGGCCGGGGGACCAGCAGCTTCCCCACAGGCA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAGCTCTTGGGGTGGATTaGCATAGAGATCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGALGVD*HRDLAA
Trigger: AGCTGCCAGATCTCTATGGCAATCCACCCCAAGAGC...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGATTGCGCACGCACTTGTaGCTTAGGTTGCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGLRTHL*LRLPMK
Trigger: CTTCATGGGCAACCTAAGGCACAAGTGCGTGCGCAA...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCGCTCTCCCCCGCTGTaGTGTTTTCATCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHRSPPL*CFHHLQ
Trigger: TTGCAGATGATGAAAACAGCACAGCGGGGGAGAGCG...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCATTGCAGTCCACAGTaGTGTTCTTTTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCHCSPQ*CSFCHG
Trigger: TCCATGGCAAAAAGAACAGCACTGTGGACTGCAATG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCCCGACAAGTTGCTCATaGGGGACAGGCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCPTSCS*GTGPAP
Trigger: TGGAGCTGGGCCTGTCCCGCATGAGCAACTTGTCGG...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGGGATTCCTGCTGCTTaGTGGACTCCTCCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRGIPAA*WTPPPC
Trigger: GCACGGAGGAGGAGTCCAGCAAGCAGCAGGAATCCC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR GCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTTTAAATGTTGCCACCTaGAGAAGGGCCAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFLNVAT*RRARYP
Trigger: CGGGTACCTGGCCCTTCTGCAGGTGGCAACATTTAA...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCAAAGAGAATGTCCATaGAATGGATGCGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRQRECP*NGCGPH
Trigger: GTGGGGACCGCATCCATTGCATGGACATTCTCTTTG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTCAAGCACAGGCCAACTaGTCCGGCTGTCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCQAQAN*SGCPRG
Trigger: GCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGACAGCGTGAATTGCTaGCCATGTCCATGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLDSVNC*PCPWKN
Trigger: ATTTTTCCATGGACATGGGCAGCAATTCACGCTGTC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGGACAGCGTGAATTGCTaGCCATGTCCATGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEDSVNC*PCPWKN
Trigger: ATTTTTCCATGGACATGGGCAGCAATTCACGCTGTC...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGGACAGCGTGAATTGCTaGCCATGTCCATGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVDSVNC*PCPWKN
Trigger: ATTTTTCCATGGACATGGGCAGCAATTCACGCTGTC...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAGAGACAGCGTGAATTaGTGCCCATGTCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPRDSVN*CPCPWK
Trigger: TTTCCATGGACATGGGCAGCAATTCACGCTGTCTCT...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGAACAGACTTCCGGCTaGTCCATAGACACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLEQTSG*SIDTLV
Trigger: AACAAGAGTGTCTATGGAGCAGCCGGAAGTCTGTTC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGAACAGACTTCCGGCTaGTCCATAGACACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTREQTSG*SIDTLV
Trigger: AACAAGAGTGTCTATGGAGCAGCCGGAAGTCTGTTC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACTGGATTCCACTTCTaGTTTGAGAACAGACTTCCG +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSTGFHF*FENRLP
Trigger: CGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTTGGCTGGGCAGGGCCTaGCAGGTTCCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCWLGRA*QVPGAR
Trigger: CCTTGCTCCTGGAACCTGGCAGGCCCTGCCCAGCCA...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAAAGTTTGGTGAGAAGTaGTCGATTAGTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPKFGEK*SISSDN
Trigger: GTTGTCTGAACTAATCGAGCACTTCTCACCAAACTT...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGATGTACTCGACATACTTaGTCCAGGGTGGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGCTRHT*SRVEGR
Trigger: ACGACCCTCCACCCTGGACCAAGTATGTCGAGTACA...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTGCTTCTTCTCTCATaGCTGTTTACTGGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVLLLLS*LFTGAK
Trigger: TTTGGCCCCAGTAAACAGCCATGAGAGAAGAAGCAA...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTTGCTTCTTCTCTCATaGCTGTTTACTGGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHLLLLS*LFTGAK
Trigger: TTTGGCCCCAGTAAACAGCCATGAGAGAAGAAGCAA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGGACTGGGCTGTCCCTaGGCACTGGTCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDGLGCP*ALVRRR
Trigger: CCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGACATCTGGGGCCCGCCTaGCTCCTCCGATGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRHLGPA*LLRWRG
Trigger: ACCACGCCATCGGAGGAGCCAGGCGGGCCCCAGATG...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCATGGTGGACACTTGTaGCGAGACTCCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGHGGHL*RDSSNS
Trigger: AGAGTTAGAGGAGTCTCGCCACAAGTGTCCACCATG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGACACACACACGGGCTCTaGATCCCCGGGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRHTHGL*IPGGAL
Trigger: CAGGGCACCCCCGGGGATCCAGAGCCCGTGTGTGTG...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCTTCAAGGACTCACACTaGCTCTTGTTGTTCACGATG +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPFKDSH*LLLFTM
Trigger: CATCGTGAACAACAAGAGCCAGTGTGAGTCCTTGAA...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTTCAAGGACTCACACTaGCTCTTGTTGTTCACGATG +
Preference number: 4 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLFKDSH*LLLFTM
Trigger: CATCGTGAACAACAAGAGCCAGTGTGAGTCCTTGAA...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTTCAAGGACTCACACTaGCTCTTGTTGTTCACGATG +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHFKDSH*LLLFTM
Trigger: CATCGTGAACAACAAGAGCCAGTGTGAGTCCTTGAA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCGTGTGCTTGTGTGAGTaGGGGTTCAGCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCVCLCE*GFSPPS
Trigger: GCTGGGAGGGCTGAACCCCCACTCACACAAGCACAC...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCAACACAGGGGGAAAATaGGACCTTGGAGACAATAGG +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVNTGGK*DLGDNR
Trigger: CCTATTGTCTCCAAGGTCCCATTTTCCCCCTGTGTT...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGAACACAGGGGGAAAATaGGACCTTGGAGACAATAGG +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRNTGGK*DLGDNR
Trigger: CCTATTGTCTCCAAGGTCCCATTTTCCCCCTGTGTT...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATAAACTCCTCCGCGTATaGTCCAGAGAGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNKLLRV*SREPWE
Trigger: CTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTTTTCACAAGACCTATaGGACCACCTGGATCTTGCC +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRFSQDL*DHLDLA
Trigger: GGCAAGATCCAGGTGGTCCCATAGGTCTTGTGAAAA...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CAA 72 bp AAGCCTTTTCACAAGACCTATGGGACCACCTGGATCTaGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: KPFHKTYGTTWI*PQRGPLCGCHQ
Trigger: CTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCCCATAGGTCTTGTGAAAAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCTCCTGCAAGGTGGTTaGGCCGCGGGCTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSLLQGG*AAGLLL
Trigger: GAGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAG...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGTGGGGTGGAAGGGACTaGGGACATACAAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRWGGRD*GHTRRW
Trigger: CCAACGCCTTGTATGTCCTCAGTCCCTTCCACCCCA...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCATGTTGAAGAGCGAGTaGACCAGAATCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIMLKSE*TRIFTA
Trigger: GGCTGTGAAGATTCTGGTTCACTCGCTCTTCAACAT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTAGAGGAGGCAGTCGCTaGCACCTGGCTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCRGGSR*HLAPGP
Trigger: AGGACCTGGAGCCAGGTGTCAGCGACTGCCTCCTCT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCCACGTTGTCAAAGTTaGCTTTCACCTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRPRCQS*LSPWSS
Trigger: ACTGGACCAAGGTGAAAGTCAACTTTGACAACGTGG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTCACAATGTCGAATATaGAGCCCTGGTACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHSQCRI*SPGTCS
Trigger: TGAACAAGTACCAGGGCTTCATATTCGACATTGTGA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGTCTTGGCCAAGATGTTaGTTTTCTCAGGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: GAGDHTENSSAYGPESPGSWPRC*FSQDFG
Trigger: ACCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGA...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTCTTGGCCAAGATGTTaGTTTTCTCAGGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHSWPRC*FSQDFG
Trigger: ACCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGGAATACTCAATAAACTaGGTGGCCTCTGGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAEEYSIN*VASGSN
Trigger: ATTTGACCCAGAGGCCACTCAGTTTATTGAGTATTC...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCAGGACCCTTTTGGTaGAGGCAAAGAGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFPGPFW*RQRECP
Trigger: TGGACATTCTCTTTGCCTTCACCAAAAGGGTCCTGG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCTGCATGCCAGGCCGTaGATGGGGCTTGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSLHARP*MGLAPL
Trigger: CAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAG...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAATCAGGATCCCGGGCTaGGCCAGAGAGGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRIRIPG*AREAGP
Trigger: AGGCCCAGCCTCTCTGGCTCAGCCCGGGATCCTGAT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCAGGAAAGTGAACGCGTaGAGGCAGAAGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCRKVNA*RQKPRA
Trigger: GGCTCGAGGCTTCTGCCTGCACGCGTTCACTTTCCT...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTCCGTTTTCTCCTCTTaGTTCTTCTCTCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPSVFSS*FFSHGC
Trigger: ACAGCCATGAGAGAAGAAGCAAGAGGAGAAAACGGA...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCCGTTTTCTCCTCTTaGTTCTTCTCTCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRSVFSS*FFSHGC
Trigger: ACAGCCATGAGAGAAGAAGCAAGAGGAGAAAACGGA...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAACCAGGTTTCCGACCTaGAGCATCTCCTCGAATTCA +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGTRFPT*SISSNS
Trigger: TGAATTCGAGGAGATGCTGCAGGTCGGAAACCTGGT...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCACTTGAAGGTCATCTCTaGTGTGAAAATCCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPLEGHL*CENPCE
Trigger: TTCACAGGGATTTTCACAGCAGAGATGACCTTCAAG...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCCTTGAAGGTCATCTCTaGTGTGAAAATCCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSLEGHL*CENPCE
Trigger: TTCACAGGGATTTTCACAGCAGAGATGACCTTCAAG...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCAGTAGGGGGTGGCAATaGAGCTGGGCAGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSSRGWQ*SWAAGP
Trigger: AGGGCCAGCTGCCCAGCTGCATTGCCACCCCCTACT...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCTGGATCCCCGGGGGTaGCCTGGCCTGGTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLLDPRG*PGLVAR
Trigger: GCGAGCAACCAGGCCAGGGCACCCCCGGGGATCCAG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACAAAGAGAATGTCCATaGAATGGATGCGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGQRECP*NGCGPH
Trigger: GTGGGGACCGCATCCATTGCATGGACATTCTCTTTG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGAGCGTTGCAGCAGGTaGCTGCGGAAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSERCSR*LRKALW
Trigger: CCAGAGAGCCTTCCGCAGGCACCTGCTGCAACGCTC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACTGGATTCCACTTCTaGTTTGAGAACAGACTTCCG +
Preference number: 4 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTTGFHF*FENRLP
Trigger: CGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTACTGACAATATGACCTaGGTGAAAACACAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GAMVHSPLRARELGLTIPTDNMT*VKTQGE
Trigger: TTCCCCCTGTGTTTTCACGCAGGTCATATTGTCAGT...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGACTGACAATATGACCTaGGTGAAAACACAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRTDNMT*VKTQGE
Trigger: TTCCCCCTGTGTTTTCACGCAGGTCATATTGTCAGT...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCCAAGGACAAGCTGCATaGCAGGCCGTGAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCQGQAA*QAVNGA
Trigger: AGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTG...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATGGACCACCTGGATCTTaGCCCAAAGAGGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNGPPGS*PKEVLC
Trigger: ACAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCC...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCTGGCAGCCCGACCTaGCTCCCAACCGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRAGSPT*LPTAFL
Trigger: CAGGAATGCGGTTGGGAGGCAGGTCGGGCTGCCAGC...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTCCATGCGCTTCTCGATaGCTGCCAGGGACTCCCGTG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCPCASR*LPGTPV
Trigger: CACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGG...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCGCTCTCCGGATGGGGTaGAAGGGACTGAGGACATAC +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCALRMG*KGLRTY
Trigger: GTATGTCCTCAGTCCCTTCCACCCCATCCGGAGAGC...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATCCTCGGTCTCAGCGATaGTGGCTTGGTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNPRSQR*WLGFAP
Trigger: AGGAGCAAAACCAAGCCACCATCGCTGAGACCGAGG...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTTGCTTCTTCTCTCATaGCTGTTTACTGGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVLLLLS*LFTGAK
Trigger: TTTGGCCCCAGTAAACAGCCATGAGAGAAGAAGCAA...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGACTGGGCTGTCCCTaGGCACTGGTCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAGLGCP*ALVRRR
Trigger: CCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCC...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCCGCTGCCGTGCTCCTaGCTCCTCGAAGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSPLPCS*LLEAIY
Trigger: GTAGATGGCTTCGAGGAGCCAGGAGCACGGCAGCGG...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATACGGTTCCAGCATGGTaGACACTTGTGGCGAGACTC +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNTVPAW*TLVARL
Trigger: GAGTCTCGCCACAAGTGTCCACCATGCTGGAACCGT...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTGGGTGGCAATGCAGCTaGGCAGCTGGCCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCGWQCS*AAGPGR
Trigger: CCGCCCAGGGCCAGCTGCCCAGCTGCATTGCCACCC...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCCGCACCCTGGGGCCTaGGGTTCCGCTTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDPHPGA*GSAFHC
Trigger: GCAGTGGAAAGCGGAACCCCAGGCCCCAGGGTGCGG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGGAGCAACTGTCCTCTaGGGTCTCACCGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSGATVL*GLTAPW
Trigger: CCAGGGTGCGGTGAGACCCCAGAGGACAGTTGCTCC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGGAGCTCAGCGGTGTTaGTCATGTCTGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRGAQRC*SCLLCC
Trigger: GCAGCACAGCAGACATGACCAACACCGCTGAGCTCC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTTCAAGGACTCACACTaGCTCTTGTTGTTCACGATG +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRFKDSH*LLLFTM
Trigger: CATCGTGAACAACAAGAGCCAGTGTGAGTCCTTGAA...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATTCGAATATGAAGCCCTaGTACTTGTTCAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHSNMKP*YLFRGR
Trigger: ACGGCCCCTGAACAAGTACCAGGGCTTCATATTCGA...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGAGAAGAAGTACTTCTaGATGATGTCCGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTREKKYF*MMSEST
Trigger: TGTGCTCTCGGACATCATCCAGAAGTACTTCTTCTC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTAACTTCTCCTCCATCTaGATCTTCAGGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFNFSSI*IFRASI
Trigger: GATGGACGCCCTGAAGATCCAGATGGAGGAGAAGTT...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTTTTCGCCTCAGCAGCTaGGATGAAGTTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFFRLSS*DEVAFQ
Trigger: CTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAA...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATCTCAGGTCAAGTaGGAGGGGGACCCCATTCGA +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRASQVK*EGDPIR
Trigger: TCGAATGGGGTCCCCCTCCCACTTGACCTGAGATGC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTCAAGAACCCCATCCTTaGGGGGCCGGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCQEPHP*GAGRER
Trigger: CCTTTCCCTGCCGGCCCCCCAAGGATGGGGTTCTTG...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAGGCATGCGCCCGGTaGAGGGGCTCCATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDEACAR*RGSMGE
Trigger: CTCTCCCATGGAGCCCCTCCACCGGGCGCATGCCTC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CAA 72 bp AGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTaGAGAACAGACTTCCGGCTGCTCCATAGACACTCT +
Preference number: 4 (lower is better)
Translates to: RPVGATLDSTSA*RTDFRLLHRHS
Trigger: AGAGTGTCTATGGAGCAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCCAGGGACTCCCGTGTaGACCTGCGGAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDPGTPV*TCGSCW
Trigger: CCAGCAGCTTCCGCAGGTTCACACGGGAGTCCCTGG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTGGTCCCGAAGGAAAGTaGACGCGTGCAGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCGPEGK*TRAGRS
Trigger: GCTTCTGCCTGCACGCGTTCACTTTCCTTCGGGACC...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCCGGGTGAGGCTGAGATaGTTCATTGCTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCRVRLR*FIALGP
Trigger: TGGTCCCAGAGCAATGAATCATCTCAGCCTCACCCG...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCCATGCCCTCAAATCGTaGCAGAGCTCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCHALKS*QSSQRT
Trigger: CGTCCTCTGAGAGCTCTGTCACGATTTGAGGGCATG...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTCACAATGTCGAATATaGAGCCCTGGTACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVSQCRI*SPGTCS
Trigger: TGAACAAGTACCAGGGCTTCATATTCGACATTGTGA...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCATCACAATGTCGAATATaGAGCCCTGGTACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPSQCRI*SPGTCS
Trigger: TGAACAAGTACCAGGGCTTCATATTCGACATTGTGA...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGAATACTCAATAAACTaGGTGGCCTCTGGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: SWDEVAFQSRRALPDQTREYSIN*VASGSN
Trigger: ATTTGACCCAGAGGCCACTCAGTTTATTGAGTATTC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTGCGCTTCTCGATGGCTaGCAGGGACTCCCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCALLDG*QGLPCE
Trigger: TTCACACGGGAGTCCCTGGCAGCCATCGAGAAGCGC...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGTTGAGCCGCGGGCTTaGTTCTCTGCCATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSVEPRA*FSAMRF
Trigger: GAAGCGCATGGCAGAGAAGCAAGCCCGCGGCTCAAC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCCGTTTTCTCCTCTTaGTTCTTCTCTCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSSVFSS*FFSHGC
Trigger: ACAGCCATGAGAGAAGAAGCAAGAGGAGAAAACGGA...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCATTGCAGTCCACAGTaGTGTTCTTTTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSHCSPQ*CSFCHG
Trigger: TCCATGGCAAAAAGAACAGCACTGTGGACTGCAATG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGCATTGCAGTCCACAGTaGTGTTCTTTTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGHCSPQ*CSFCHG
Trigger: TCCATGGCAAAAAGAACAGCACTGTGGACTGCAATG...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCATTGCAGTCCACAGTaGTGTTCTTTTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRHCSPQ*CSFCHG
Trigger: TCCATGGCAAAAAGAACAGCACTGTGGACTGCAATG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACTTGAAGGTCATCTCTaGTGTGAAAATCCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPLEGHL*CENPCE
Trigger: TTCACAGGGATTTTCACAGCAGAGATGACCTTCAAG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAAGTAGGGGGTGGCAATaGAGCTGGGCAGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRSRGWQ*SWAAGP
Trigger: AGGGCCAGCTGCCCAGCTGCATTGCCACCCCCTACT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGGCTGGGATTCCTGCTaGTTGCTGGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSGWDSC*LLDSSS
Trigger: GGAGGAGGAGTCCAGCAAGCAGCAGGAATCCCAGCC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR GCA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATGTGACGTCAAAGGCCTaGTTGGTCACAATGTCGAAT +
Preference number: 4 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHVTSKA*LVTMSN
Trigger: ATTCGACATTGTGACCAAGCAGGCCTTTGACGTCAC...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGAGCGTTGCAGCAGGTaGCTGCGGAAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRERCSR*LRKALW
Trigger: CCAGAGAGCCTTCCGCAGGCACCTGCTGCAACGCTC...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCTTCGGAGAGGCCGCTaGCCGCCTGCTGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDLRRGR*PPADGR
Trigger: TCTTCCGTCAGCAGGCGGGCAGCGGCCTCTCCGAAG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTAGAGCCGCAGGGCATTaGCTGACCAGACCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCRAAGH*LTRPGH
Trigger: GTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGACAGCGTGAATTGCTaGCCATGTCCATGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSDSVNC*PCPWKN
Trigger: ATTTTTCCATGGACATGGGCAGCAATTCACGCTGTC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGACTGACAATATGACCTaGGTGAAAACACAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRTDNMT*VKTQGE
Trigger: TTCCCCCTGTGTTTTCACGCAGGTCATATTGTCAGT...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCGCCGTGAATGGGGCTTaGACCCTTGTGTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCAVNGA*TLVSFG
Trigger: ACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGC...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCCCAACCACACCGTCTaGAGCCAGCCCCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDPNHTV*SQPQAP
Trigger: AGGTGCCTGGGGCTGGCTGCAGACGGTGTGGTTGGG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAATTGCCATAGAGATCTaGCAGCTTTTTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGIAIEI*QLFGGL
Trigger: CAGGCCTCCAAAAAGCTGCCAGATCTCTATGGCAAT...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCAGAGCAGGTAATTTTCTaGATCACTGAGGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPEQVIF*ITEVKV
Trigger: GACCTTTACCTCAGTGATCCAGAAAATTACCTGCTC...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTTGCTTCTTCTCTCATaGCTGTTTACTGGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSLLLLS*LFTGAK
Trigger: TTTGGCCCCAGTAAACAGCCATGAGAGAAGAAGCAA...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTAGCAGTGATGTGTGGTaGCTCTCGCTCTCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCSSDVW*LSLSPA
Trigger: AGCGGGGGAGAGCGAGAGCCACCACACATCACTGCT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAACATCTGGGGCCCGCCTaGCTCCTCCGATGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKHLGPA*LLRWRG
Trigger: ACCACGCCATCGGAGGAGCCAGGCGGGCCCCAGATG...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTGGGAGGTCAGCATCTaGGGCCCGCCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAWEVSI*GPPGSS
Trigger: GGAGGAGCCAGGCGGGCCCCAGATGCTGACCTCCCA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTTCTACACACGGAGCCTaGGAGGTCAGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCSTHGA*EVSIWG
Trigger: GCCCCAGATGCTGACCTCCCAGGCTCCGTGTGTAGA...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGAGACGGTTCCAGCATaGTGGACACTTGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRETVPA*WTLVAR
Trigger: TCTCGCCACAAGTGTCCACCATGCTGGAACCGTCTC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTATGCAGCTGGGCAGCTaGCCCTGGGCGGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCMQLGS*PWAARA
Trigger: AGCCCTTGCCGCCCAGGGCCAGCTGCCCAGCTGCAT...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCACCTTCTCCGTCTCTaGGGGTGGCGGGGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDHLLRL*GWRGVG
Trigger: CCCTACTCCCCGCCACCCCCAGAGACGGAGAAGGTG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCCTCATCTTCTTCTTaGTCATCTGTGTCTGACTCG +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSSSSSS*SSVSDS
Trigger: CGAGTCAGACACAGATGACCAAGAAGAAGATGAGGA...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTTCAAGGACTCACACTaGCTCTTGTTGTTCACGATG +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRFKDSH*LLLFTM
Trigger: CATCGTGAACAACAAGAGCCAGTGTGAGTCCTTGAA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATGCTCTTCATACCCCCTaGAGTCCACAGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNALHTP*SPQLHT
Trigger: TGTATGCAGCTGTGGACTCCAGGGGGTATGAAGAGC...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGGCATGGGTTGGGTCTaGGGTTGCCACCAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSGMGWV*GCHQGN
Trigger: GTTCCCTTGGTGGCAACCCCAGACCCAACCCATGCC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTGGCATGGGTTGGGTCTaGGGTTGCCACCAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCGMGWV*GCHQGN
Trigger: GTTCCCTTGGTGGCAACCCCAGACCCAACCCATGCC...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACCTTTATTCAGTACGATaGAAGTCTTTTGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHLYSVR*KSFGCY
Trigger: ATAGCACCCAAAAGACTTTCATCGTACTGAATAAAG...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCCTTTATTCAGTACGATaGAAGTCTTTTGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPLYSVR*KSFGCY
Trigger: ATAGCACCCAAAAGACTTTCATCGTACTGAATAAAG...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTTTATTCAGTACGATaGAAGTCTTTTGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRLYSVR*KSFGCY
Trigger: ATAGCACCCAAAAGACTTTCATCGTACTGAATAAAG...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATCCTCGTGTTCTTTCTTaGGCATTTCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNPRVLS*AFPWPP
Trigger: AGGAGGCCATGGAAATGCTCAAGAAAGAACACGAGG...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTACTTCACTCCCTGCTTaGTGGACATCCACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCTSLPA*WTSTAG
Trigger: GCCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCCCAGGTGGTCCGCTTaGCAAAGCGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLPRWSA*QSAGPS
Trigger: AGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCACAATGTCGAATATaGAGCCCTGGTACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KLLRVWSREPWEIASFLSSQCRI*SPGTCS
Trigger: TGAACAAGTACCAGGGCTTCATATTCGACATTGTGA...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATAGAAGTACTTCTGGATaGTGTCCGAGAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNRSTSG*CPRAQC
Trigger: GCACTGTGCTCTCGGACATCATCCAGAAGTACTTCT...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATTCATCACGTAGGCGATaGGGCCCTCTCGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDSSRRR*GPLAQG
Trigger: CCCCTGAGCGAGAGGGCCTCATCGCCTACGTGATGA...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAAATAGGGGGCCAGAGTaGGCCCCGTGGACAAGAACC +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRNRGPE*APWTRT
Trigger: GGTTCTTGTCCACGGGGCTCACTCTGGCCCCCTATT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAATCAGGATCCCGGGCTaGGCCAGAGAGGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKIRIPG*AREAGP
Trigger: AGGCCCAGCCTCTCTGGCTCAGCCCGGGATCCTGAT...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCCTGTTACCTCAGGGTaGCAGTTCTCTATGTTAAAA +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRPVTSG*QFSMLK
Trigger: TTTTAACATAGAGAACTGTCACCCTGAGGTAACAGG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCTCTTGGGGTGGATTaGCATAGAGATCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRALGVD*HRDLAA
Trigger: AGCTGCCAGATCTCTATGGCAATCCACCCCAAGAGC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGTTGCGCACGCACTTGTaGCTTAGGTTGCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRLRTHL*LRLPMK
Trigger: CTTCATGGGCAACCTAAGGCACAAGTGCGTGCGCAA...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACATTGCAGTCCACAGTaGTGTTCTTTTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGHCSPQ*CSFCHG
Trigger: TCCATGGCAAAAAGAACAGCACTGTGGACTGCAATG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCTTGAAGGTCATCTCTaGTGTGAAAATCCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRLEGHL*CENPCE
Trigger: TTCACAGGGATTTTCACAGCAGAGATGACCTTCAAG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGTGCCCTGGCCTGGTTaGTCGCCTTCCTCAAACCGT +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRVPWPG*SPSSNR
Trigger: ACGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCAC...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTTGTGGTAGCAGGTCTTaGGCAACCGCCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCCGSRS*ATATRP
Trigger: AGGTCTGGTGGCGGTTGCGCAAGACCTGCTACCACA...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGACCATCCCTTTCCCTaGACAGGGCGCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDDHPFP*TGRRAK
Trigger: CTTGGCCCTGCGCCCTGTGCAGGGAAAGGGATGGTC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTCCCAACCACACCGTCTaGAGCCAGCCCCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAPNHTV*SQPQAP
Trigger: AGGTGCCTGGGGCTGGCTGCAGACGGTGTGGTTGGG...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGTGTACTCGACATACTTaGTCCAGGGTGGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRCTRHT*SRVEGR
Trigger: ACGACCCTCCACCCTGGACCAAGTATGTCGAGTACA...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAACCAGCAGTGATGTGTaGTGGCTCTCGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRTSSDV*WLSLSP
Trigger: GGGGGAGAGCGAGAGCCACCACACATCACTGCTGGT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTTGCCATGGAGGGCGTaGCCAGGAGCCGAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAALPWRA*PGAEVP
Trigger: CGGAACCTCGGCTCCTGGCCACGCCCTCCATGGCAA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGTTGCCATGGAGGGCGTaGCCAGGAGCCGAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLLPWRA*PGAEVP
Trigger: CGGAACCTCGGCTCCTGGCCACGCCCTCCATGGCAA...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGCTCCTCCGATGGCGTaGTCGTGTCTGGCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLAPPMA*SCLAGA
Trigger: AGCACCCGCCAGACACGACCACGCCATCGGAGGAGC...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTCACCTTCTCCGTCTCTaGGGGTGGCGGGGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAHLLRL*GWRGVG
Trigger: CCCTACTCCCCGCCACCCCCAGAGACGGAGAAGGTG...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTCGGCCTGAGATGCACTaGCCTCGGCCTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAARPEMH*PRPQRR
Trigger: CCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCG...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTCTTGTTGTTCACGATaGTGTAGTTCAAAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVSCCSR*CSSKAS
Trigger: ACTTGCCTTTGAACTACACCATCGTGAACAACAAGA...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGAGAAGAAGTACTTCTaGATGATGTCCGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFEKKYF*MMSEST
Trigger: TGTGCTCTCGGACATCATCCAGAAGTACTTCTTCTC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGATCAGACCCCCGCACCTaGAGGTTATCGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRSDPRT*RLSLVA
Trigger: AGCCACCAGCGATAACCTCCAGGTGCGGGGGTCTGA...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTAGCCCTCTCTTCCGATaGCTGGCTGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAASPLFR*LAGQGL
Trigger: CAGGCCCTGCCCAGCCAGCCATCGGAAGAGAGGGCT...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTAAGAGGTCCTCTGTGTaGGTGCCATCAGGATCCCGG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCKRSSV*VPSGSR
Trigger: CCGGGATCCTGATGGCACCCACACAGAGGACCTCTT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCAATAGGATTTCCACTTaGAGAAATGTCGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSINRIST*RNVAGT
Trigger: TGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAATAGGATTTCCACTTaGAGAAATGTCGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGNRIST*RNVAGT
Trigger: TGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATT...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CAA 72 bp TCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGA +
Preference number: 4 (lower is better)
Translates to: SVLYFASAAGMK*LSRAAGHCLTR
Trigger: TCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTCCTGCAAGGTGGTTaGGCCGCGGGCTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLLLQGG*AAGLLL
Trigger: GAGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAG...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCCAGGGGCTCTCCGATaGGCTCTTGGGGTGGATTGC +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLPGALR*ALGVDC
Trigger: GCAATCCACCCCAAGAGCTCATCGGAGAGCCCCTGG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAACTCGCCTGCGAAAGGTaGAAATGCTCCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKLACER*KCSRGW
Trigger: CCAGCCGCGGGAGCATTTTCACCTTTCGCAGGCGAG...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCGTCCGCAGTGACTTaGTGGGGCCCATCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAASAVT*WGPSRQ
Trigger: TTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGC...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGGCGTCCGCAGTGACTTaGTGGGGCCCATCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLASAVT*WGPSRQ
Trigger: TTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGC...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGAGAAGTACTTCTGGATaGTGTCCGAGAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRRSTSG*CPRAQC
Trigger: GCACTGTGCTCTCGGACATCATCCAGAAGTACTTCT...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCCCAGGACCCTTTTGGTaGAGGCAAAGAGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCPGPFW*RQRECP
Trigger: TGGACATTCTCTTTGCCTTCACCAAAAGGGTCCTGG...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAACTGCATGCCAGGCCGTaGATGGGGCTTGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKLHARP*MGLAPL
Trigger: CAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAG...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTTGCGGAAGCTGCTGGTaGCCCGAGGTAATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCCGSCW*PEVIGS
Trigger: ACTTCCTATTACCTCGGGGCACCAGCAGCTTCCGCA...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGCGGGCTTGCTTCTCTaGCATGCGCTTCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDAGLLL*HALLDG
Trigger: GCCATCGAGAAGCGCATGGCAGAGAAGCAAGCCCGC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTAGCTTTTTGGAGGCCTaGAGGTCCAGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCSFLEA*RSSWGR
Trigger: CCGGCCCCAGCTGGACCTGCAGGCCTCCAAAAAGCT...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGAGCTTTTTGGAGGCCTaGAGGTCCAGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLSFLEA*RSSWGR
Trigger: CCGGCCCCAGCTGGACCTGCAGGCCTCCAAAAAGCT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGGTGAGGACGCTGACTaGGCTGAGGGCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQGEDAD*AEGPLP
Trigger: CGGCAGCGGGCCCTCAGCGCAGTCAGCGTCCTCACC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGATGGACTCCTCCTCCGTaGCCAGGCTGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRWTPPP*PGCSPH
Trigger: ATGAGGAGAACAGCCTGGGCACGGAGGAGGAGTCCA...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCCAGTCGGCCTGAGATaGACTGGCCTCGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLPVGLR*TGLGLR
Trigger: TCTGAGGCCGAGGCCAGTGCATCTCAGGCCGACTGG...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCCGACACCTCTTCGTaGTTGCGCCGGAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAADTSS*LRRSVV
Trigger: CACCACACTCCGGCGCAAGCACGAAGAGGTGTCGGC...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCAAAGGCAACTATCAGTaGCTAGGGCCAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSKGNYQ*LGPALG
Trigger: TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTT...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGACCATCCCTTTCCCTaGACAGGGCGCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAADHPFP*TGRRAK
Trigger: CTTGGCCCTGCGCCCTGTGCAGGGAAAGGGATGGTC...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGATGCCCCCTTCAGCACTaGCACAAATGTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRCPLQH*HKCPAL
Trigger: GAGGGCTGGACATTTGTGGCAGTGCTGAAGGGGGCA...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGATTTACTCGCCGGCAATaGCCCCTTCAGCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRFTRRQ*PLQHCH
Trigger: GTGGCAGTGCTGAAGGGGGCATTGCCGGCGAGTAAA...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGTCTGTCCTTCCCTCCTaGTGGTCATTGTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRSVLPS*WSLCSS
Trigger: AGAACTGCACAATGACCAGCAGGAGGGAAGGACAGA...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGAAGTTTGGTGAGAAGTaGTCGATTAGTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRKFGEK*SISSDN
Trigger: GTTGTCTGAACTAATCGAGCACTTCTCACCAAACTT...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTCCTCACGTTGCCTGTaGGGAAGCTGCTGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAASSRCL*GSCWSP
Trigger: GGGGGACCAGCAGCTTCCCCACAGGCAACGTGAGGA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGGGCTCTCCTGCAAGGTaGTTGAGCCGCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLGSPAR*LSRGLA
Trigger: AGCAAGCCCGCGGCTCAACCACCTTGCAGGAGAGCC...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGATGAGCTCTTGGGGTaGATTGCCATAGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRDELLG*IAIEIW
Trigger: CCAGATCTCTATGGCAATCCACCCCAAGAGCTCATC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGGTGGAGGGTCGTGCTaGGCCATGAACACGCAGTTG +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDGGGSC*AMNTQL
Trigger: CAACTGCGTGTTCATGGCCCAGCACGACCCTCCACC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAGAGCAGGTAATTTTCTaGATCACTGAGGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGEQVIF*ITEVKV
Trigger: GACCTTTACCTCAGTGATCCAGAAAATTACCTGCTC...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGACCCGCGGCTGGAACGTaGCTTCATAGAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRPAAGT*LHRSPA
Trigger: AGCAGGACTTCTATGAAGCCACGTTCCAGCCGCGGG...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCCGCTGCCGTGCTCCTaGCTCCTCGAAGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLPLPCS*LLEAIY
Trigger: GTAGATGGCTTCGAGGAGCCAGGAGCACGGCAGCGG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCCATGGTGGACACTTGTaGCGAGACTCCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCHGGHL*RDSSNS
Trigger: AGAGTTAGAGGAGTCTCGCCACAAGTGTCCACCATG...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGGGTGGCAATGCAGCTaGGCAGCTGGCCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQGWQCS*AAGPGR
Trigger: CCGCCCAGGGCCAGCTGCCCAGCTGCATTGCCACCC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTTGTTGTTCACGATaGTGTAGTTCAAAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRSCCSR*CSSKAS
Trigger: ACTTGCCTTTGAACTACACCATCGTGAACAACAAGA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCAACTTCTCCTCCATCTaGATCTTCAGGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCNFSSI*IFRASI
Trigger: GATGGACGCCCTGAAGATCCAGATGGAGGAGAAGTT...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGTTTCGCCTCAGCAGCTaGGATGAAGTTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRFRLSS*DEVAFQ
Trigger: CTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAA...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCCCACGGCCTGTGTCTaGCCTCCGTGTGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLPTACV*PPCVRT
Trigger: AGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTCAAGAACCCCATCCTTaGGGGGCCGGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCQEPHP*GAGRER
Trigger: CCTTTCCCTGCCGGCCCCCCAAGGATGGGGTTCTTG...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGATGGGAGAGCTGGAATaGGGCAGCCAAGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLMGELE*GSQAPA
Trigger: GGCAGGGGCTTGGCTGCCCCATTCCAGCTCTCCCAT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
3UTR CAA 72 bp GAGAAGTGCTCGATTAGTTCAGACAACATCTGGCACTaGATGTCTGTCCTTCCCTCCTGCTGGTCATTGTGC +
Preference number: 4 (lower is better)
Translates to: EKCSISSDNIWH*MSVLPSCWSLC
Trigger: GCACAATGACCAGCAGGAGGGAAGGACAGACATCAAGTGCCAGATGTTGTCTGAACTAATCGAGCACTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGATGTTGAAGAGCGAGTaGACCAGAATCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRMLKSE*TRIFTA
Trigger: GGCTGTGAAGATTCTGGTTCACTCGCTCTTCAACAT...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGTCCCGAAGGAAAGTaGACGCGTGCAGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAGPEGK*TRAGRS
Trigger: GCTTCTGCCTGCACGCGTTCACTTTCCTTCGGGACC...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTCTTCCCTGCGGACCTaGGGGTCTGCTGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAASSLRT*GSADRG
Trigger: GCCTCTATCAGCAGACCCTCAGGTCCGCAGGGAAGA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATACTTCACTCCCTGCTTaGTGGACATCCACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDTSLPA*WTSTAG
Trigger: GCCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGT...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGCGAGGCAGCAGGCCTaGGTCGCTGTCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQARQQA*VAVPQL
Trigger: GAGCTGAGGGACAGCGACTCAGGCCTGCTGCCTCGC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCCTCAGCAGCTGGGATaGAGTTGCTTTCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDPQQLG*SCFPEP
Trigger: CGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGAATAGGGGGCCAGAGTaGGCCCCGTGGACAAGAACC +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLNRGPE*APWTRT
Trigger: GGTTCTTGTCCACGGGGCTCACTCTGGCCCCCTATT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGGCGGGCTTGCTTCTCTaGCATGCGCTTCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLAGLLL*HALLDG
Trigger: GCCATCGAGAAGCGCATGGCAGAGAAGCAAGCCCGC...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCCGACAAGTTGCTCATaGGGGACAGGCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLPTSCS*GTGPAP
Trigger: TGGAGCTGGGCCTGTCCCGCATGAGCAACTTGTCGG...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTGCAGCACCGACAAGTTaGTCATGCGGGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCAAPTS*SCGTGP
Trigger: TGGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGC...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAAGCAGGCATAATGACTaGCCCGACACCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRSRHND*PDTSMQ
Trigger: CTGCATGGAGGTGTCGGGGCAGTCATTATGCCTGCT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAGTGCCCTGGCCTGGTTaGTCGCCTTCCTCAAACCGT +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKVPWPG*SPSSNR
Trigger: ACGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCAC...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATTGGACTCCTCCTCCGTaGCCAGGCTGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDWTPPP*PGCSPH
Trigger: ATGAGGAGAACAGCCTGGGCACGGAGGAGGAGTCCA...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGGTGTTGGTCATGTCTaGTGTGCTGCCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDGVGHV*CAALGA
Trigger: TGCTCCGAGGGCAGCACAGCAGACATGACCAACACC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCAAGGACAAGCTGCATaGCAGGCCGTGAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDQGQAA*QAVNGA
Trigger: AGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGTGGAGGGTCGTGCTaGGCCATGAACACGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAGGGSC*AMNTQL
Trigger: CAACTGCGTGTTCATGGCCCAGCACGACCCTCCACC...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTAGCAGTGATGTGTGGTaGCTCTCGCTCTCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAASSDVW*LSLSPA
Trigger: AGCGGGGGAGAGCGAGAGCCACCACACATCACTGCT...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGCCTGGCTCCTCCGATaGCGTGGTCGTGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQAWLLR*RGRVWR
Trigger: CCGCCAGACACGACCACGCCATCGGAGGAGCCAGGC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGTCTACACACGGAGCCTaGGAGGTCAGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLSTHGA*EVSIWG
Trigger: GCCCCAGATGCTGACCTCCCAGGCTCCGTGTGTAGA...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCGGGCCAGGGCCAGCTaGAGGTTGTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLRARAS*RLFISL
Trigger: CAGAGAGATGAACAACCTCCAGCTGGCCCTGGCCCG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATTCCTCATCTTCTTCTTaGTCATCTGTGTCTGACTCG +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNSSSSS*SSVSDS
Trigger: CGAGTCAGACACAGATGACCAAGAAGAAGATGAGGA...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGGAGCTCAGCGGTGTTaGTCATGTCTGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDGAQRC*SCLLCC
Trigger: GCAGCACAGCAGACATGACCAACACCGCTGAGCTCC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTGGGTCCTTGACATCCTaGCCGAGGTCAGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCGSLTS*PRSGIC
Trigger: GCAGATCCCTGACCTCGGCCAGGATGTCAAGGACCC...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGATCTTGTTGTTCACGATaGTGTAGTTCAAAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGSCCSR*CSSKAS
Trigger: ACTTGCCTTTGAACTACACCATCGTGAACAACAAGA...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGCTCTTCATACCCCCTaGAGTCCACAGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSALHTP*SPQLHT
Trigger: TGTATGCAGCTGTGGACTCCAGGGGGTATGAAGAGC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATGAGAAGAAGTACTTCTaGATGATGTCCGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNEKKYF*MMSEST
Trigger: TGTGCTCTCGGACATCATCCAGAAGTACTTCTTCTC...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTCAGACCCCCGCACCTaGAGGTTATCGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAASDPRT*RLSLVA
Trigger: AGCCACCAGCGATAACCTCCAGGTGCGGGGGTCTGA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGTGTGCTTGTGTGAGTaGGGGTTCAGCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAVCLCE*GFSPPS
Trigger: GCTGGGAGGGCTGAACCCCCACTCACACAAGCACAC...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGAGCCCCAAACCCCCATaGCTCAGCCCTCTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLSPKPP*LSPLFR
Trigger: TCGGAAGAGAGGGCTGAGCCATGGGGGTTTGGGGCT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGTCCTTCCCTCCTGCTaGTCATTGTGCAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSVLPSC*SLCSSG
Trigger: TCCAGAACTGCACAATGACCAGCAGGAGGGAAGGAC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTCTCGAGCCAGAATCTTaGCCAGAGACTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCLEPES*PETQRC
Trigger: ACACCTTTGAGTCTCTGGTCAAGATTCTGGCTCGAG...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGACTTCACTCCCTGCTTaGTGGACATCCACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLTSLPA*WTSTAG
Trigger: GCCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCAGAAGTACTTCTGGATaGTGTCCGAGAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSRSTSG*CPRAQC
Trigger: GCACTGTGCTCTCGGACATCATCCAGAAGTACTTCT...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCCTCAGCAGCTGGGATaGAGTTGCTTTCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLPQQLG*SCFPEP
Trigger: CGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGG...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCATGTAGATCTTCCCTaGGGACCTGAGGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDHVDLP*GPEGLL
Trigger: CAGCAGACCCTCAGGTCCGCAGGGAAGATCTACATG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTACCAGGTTTCCGACCTaGAGCATCTCCTCGAATTCA +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCTRFPT*SISSNS
Trigger: TGAATTCGAGGAGATGCTGCAGGTCGGAAACCTGGT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTGGACTCCTCCTCCGTaGCCAGGCTGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAWTPPP*PGCSPH
Trigger: ATGAGGAGAACAGCCTGGGCACGGAGGAGGAGTCCA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGTGGACTCCTCCTCCGTaGCCAGGCTGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLWTPPP*PGCSPH
Trigger: ATGAGGAGAACAGCCTGGGCACGGAGGAGGAGTCCA...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGTGTTGGTCATGTCTaGTGTGCTGCCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLGVGHV*CAALGA
Trigger: TGCTCCGAGGGCAGCACAGCAGACATGACCAACACC...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCCCAACCACACCGTCTaGAGCCAGCCCCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQPNHTV*SQPQAP
Trigger: AGGTGCCTGGGGCTGGCTGCAGACGGTGTGGTTGGG...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGACCTGCGGAAGCTGCTaGTGCCCCGAGGTAATAGGA +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLTCGSC*CPEVIG
Trigger: TCCTATTACCTCGGGGCACCAGCAGCTTCCGCAGGT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGATGTACTCGACATACTTaGTCCAGGGTGGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRCTRHT*SRVEGR
Trigger: ACGACCCTCCACCCTGGACCAAGTATGTCGAGTACA...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGACTCATGGCTGTTTACTaGGGCCAAAGGGGACATCTC +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRLMAVY*GQRGHL
Trigger: GAGATGTCCCCTTTGGCCCCAGTAAACAGCCATGAG...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCTTCTGAGTCAGACTTaGGGAGCCTGTCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLLLSQT*GACPPH
Trigger: GTGGGGAGGACAGGCTCCCCAAGTCTGACTCAGAAG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTCTGAGTCAGACTTaGGGAGCCTGTCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLLLSQT*GACPPH
Trigger: GTGGGGAGGACAGGCTCCCCAAGTCTGACTCAGAAG...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGCTCCTCCGATGGCGTaGTCGTGTCTGGCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQAPPMA*SCLAGA
Trigger: AGCACCCGCCAGACACGACCACGCCATCGGAGGAGC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGGTGTTTCCTTGCGGGTaGGAGGCACCTTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLVFPCG*EAPSPS
Trigger: AGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACAC...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATAGTGAAGCAGTCCTCTaGGTCCTTGACATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDSEAVL*VLDILA
Trigger: GGCCAGGATGTCAAGGACCCAGAGGACTGCTTCACT...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTTCGAATATGAAGCCCTaGTACTTGTTCAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCSNMKP*YLFRGR
Trigger: ACGGCCCCTGAACAAGTACCAGGGCTTCATATTCGA...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCAACTTCTCCTCCATCTaGATCTTCAGGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSNFSSI*IFRASI
Trigger: GATGGACGCCCTGAAGATCCAGATGGAGGAGAAGTT...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTCTGCGGAAGGCTCTCTaGATAACCATGGCCGACACC +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAALRKAL*ITMADT
Trigger: GGTGTCGGCCATGGTTATCCAGAGAGCCTTCCGCAG...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTTTTCGCCTCAGCAGCTaGGATGAAGTTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCFRLSS*DEVAFQ
Trigger: CTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAA...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAGCATCTCAGGTCAAGTaGGAGGGGGACCCCATTCGA +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKASQVK*EGDPIR
Trigger: TCGAATGGGGTCCCCCTCCCACTTGACCTGAGATGC...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTATGCCAGGCCGTGAATaGGGCTTGCACCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAMPGRE*GLHPCV
Trigger: GACACAAGGGTGCAAGCCCCATTCACGGCCTGGCAT...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGAAACTCCTCCGCGTATaGTCCAGAGAGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLKLLRV*SREPWE
Trigger: CTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCTCCTGCAAGGTGGTTaGGCCGCGGGCTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQLLQGG*AAGLLL
Trigger: GAGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAG...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTATGTTGAAGAGCGAGTaGACCAGAATCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCMLKSE*TRIFTA
Trigger: GGCTGTGAAGATTCTGGTTCACTCGCTCTTCAACAT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAATCTGGGACCATCTTCTaGGTCAGACTTGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKSGTIF*VRLGEP
Trigger: AGGCTCCCCAAGTCTGACTCAGAAGATGGTCCCAGA...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTTGCCAGCCTCCCACTTaGCATAAGCGAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCCQPPT*HKRSWP
Trigger: TGGCCAACTTCGCTTATGTCAAGTGGGAGGCTGGCA...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTGCCAGCCTCCCACTTaGCATAAGCGAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAACQPPT*HKRSWP
Trigger: TGGCCAACTTCGCTTATGTCAAGTGGGAGGCTGGCA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAAGGATTGTCAGCAGCTaGAGAGGTCCTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKRIVSS*RGPGGD
Trigger: ATCACCCCCAGGACCTCTTCAGCTGCTGACAATCCT...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAGGAGGACTCGGAAGGTaGGTAAGGCTGAGACATTGC +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKGGLGR*VRLRHC
Trigger: GCAATGTCTCAGCCTTACGCACCTTCCGAGTCCTCC...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333535.9
ENST00000423572.7
CDS-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGTCGTGTCTGGCGGGTaGTCTAGCATCACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQVVSGG*SSITGR
Trigger: CCGCCCTGTGATGCTAGAGCACCCGCCAGACACGAC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTAAGAAGTCCATCATGTaGCAGCGAGGCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCKKSIM*QRGSRP
Trigger: AGGCCTGCTGCCTCGCTGGCACATGATGGACTTCTT...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCAAACCGTGTTTCCTTaGGGGTGGGAGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLQTVFP*GWEAPS
Trigger: AGAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTG...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCCGAGGTCAGGGATCTaGTCCAGGAGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQPRSGI*SRSSAV
Trigger: CACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGG...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGACAAAGAGAATGTCCATaGAATGGATGCGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRQRECP*NGCGPH
Trigger: GTGGGGACCGCATCCATTGCATGGACATTCTCTTTG...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTTGCTTCAAAGAGCGTTaGAGCAGGTGCCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCCFKER*SRCLRK
Trigger: CTTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCA...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTGCCGTGAATGGGGCTTaGACCCTTGTGTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCAVNGA*TLVSFG
Trigger: ACCAAAGGACACAAGGGTGCAAGCCCCATTCACGGC...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTGGACCACCTGGATCTTaGCCCAAAGAGGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCGPPGS*PKEVLC
Trigger: ACAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCC...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTTTCTCATCCTGCTTCTaGGCACAGGCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCFSSCF*AQALLT
Trigger: CGTGAGGAGAGCCTGTGCCCAGAAGCAGGATGAGAA...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCAAAGGAATCGAAGCTaGTGTAGCCGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLQRNRS*CSRGRG
Trigger: ACCCCGACCACGGCTACACCAGCTTCGATTCCTTTG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCCTCGGTCTCAGCGATaGTGGCTTGGTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLPRSQR*WLGFAP
Trigger: AGGAGCAAAACCAAGCCACCATCGCTGAGACCGAGG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCCGCTGCCGTGCTCCTaGCTCCTCGAAGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQPLPCS*LLEAIY
Trigger: GTAGATGGCTTCGAGGAGCCAGGAGCACGGCAGCGG...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAGAGACGGTTCCAGCATaGTGGACACTTGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKETVPA*WTLVAR
Trigger: TCTCGCCACAAGTGTCCACCATGCTGGAACCGTCTC...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCCACCAGACCTTCCCTaGGGCCTGTGTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQPPDLP*GLCGVH
Trigger: GTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGG...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGAGGAGATGGAGGAGCTaGAGGGTGGGCCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQRRWRS*RVGQGV
Trigger: GACCCCTTGGCCCACCCTCCAGCTCCTCCATCTCCT...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAGGCAGTGAAGACCTGTaGGAGCCACACTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKGSEDL*EPHWIP
Trigger: TGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCC...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGTATTCCAGCTGTTGGTaGAGTAGTAGTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLYSSCW*SSSGAG
Trigger: CCCTGCGCCACTACTACTTCACCAACAGCTGGAATA...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
CDS-3UTR GCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTTTGCGCACGCACTTGTaGCTTAGGTTGCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCLRTHL*LRLPMK
Trigger: CTTCATGGGCAACCTAAGGCACAAGTGCGTGCGCAA...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCAAAGAGAATGTCCATaGAATGGATGCGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDQRECP*NGCGPH
Trigger: GTGGGGACCGCATCCATTGCATGGACATTCTCTTTG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTACTGGATTCCACTTCTaGTTTGAGAACAGACTTCCG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCTGFHF*FENRLP
Trigger: CGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTACTGACAATATGACCTaGGTGAAAACACAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCTDNMT*VKTQGE
Trigger: TTCCCCCTGTGTTTTCACGCAGGTCATATTGTCAGT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCCCCTCTCTCAAAGGTaGCATGGTTCATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLPLSQR*HGSFPS
Trigger: AGAGGGGAATGAACCATGGCACCTTTGAGAGAGGGG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCAAGTTTGGTGAGAAGTaGTCGATTAGTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCKFGEK*SISSDN
Trigger: GTTGTCTGAACTAATCGAGCACTTCTCACCAAACTT...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTTGTACTCGACATACTTaGTCCAGGGTGGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCCTRHT*SRVEGR
Trigger: ACGACCCTCCACCCTGGACCAAGTATGTCGAGTACA...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGTGTACTCGACATACTTaGTCCAGGGTGGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLCTRHT*SRVEGR
Trigger: ACGACCCTCCACCCTGGACCAAGTATGTCGAGTACA...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTCATGGCTGTTTACTaGGGCCAAAGGGGACATCTC +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLLMAVY*GQRGHL
Trigger: GAGATGTCCCCTTTGGCCCCAGTAAACAGCCATGAG...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGACCAGCAGTGATGTGTaGTGGCTCTCGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQTSSDV*WLSLSP
Trigger: GGGGGAGAGCGAGAGCCACCACACATCACTGCTGGT...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTTTCAAGGACTCACACTaGCTCTTGTTGTTCACGATG +
Preference number: 4 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCFKDSH*LLLFTM
Trigger: CATCGTGAACAACAAGAGCCAGTGTGAGTCCTTGAA...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGCTCTTCATACCCCCTaGAGTCCACAGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLALHTP*SPQLHT
Trigger: TGTATGCAGCTGTGGACTCCAGGGGGTATGAAGAGC...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGAGGAAGGCCCCAGGCTaGTTTGTGACTGACTGCATT +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLRKAPG*FVTDCI
Trigger: AATGCAGTCAGTCACAAACCAGCCTGGGGCCTTCCT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGAGCCCCAAACCCCCATaGCTCAGCCCTCTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQSPKPP*LSPLFR
Trigger: TCGGAAGAGAGGGCTGAGCCATGGGGGTTTGGGGCT...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTAACCGTGTCCCACACTaGACTCAAAGGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCNRVPH*TQREHR
Trigger: CCTGTGTTCCCTTTGAGTCCAGTGTGGGACACGGTT...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR TCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGAGGCGTTGGTGGCACTaGACCGGAAGATGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQRRWWH*TGRWSC
Trigger: GCAAGACCATCTTCCGGTTCAGTGCCACCAACGCCT...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTACTCAAGCAGAACCTTaGTGGTCTTCCGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAATQAEP*WSSAPL
Trigger: TAGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGT...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCTCTTGGCCAAGATGTTaGTTTTCTCAGGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSSWPRC*FSQDFG
Trigger: ACCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGA...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGTGGACTCCTCCTCCGTaGCCAGGCTGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQWTPPP*PGCSPH
Trigger: ATGAGGAGAACAGCCTGGGCACGGAGGAGGAGTCCA...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGATGAGCTCTTGGGGTaGATTGCCATAGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLDELLG*IAIEIW
Trigger: CCAGATCTCTATGGCAATCCACCCCAAGAGCTCATC...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTCATGGTGGACACTTGTaGCGAGACTCCTCTAACTCT +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAHGGHL*RDSSNS
Trigger: AGAGTTAGAGGAGTCTCGCCACAAGTGTCCACCATG...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGTGTTTCCTTGCGGGTaGGAGGCACCTTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQVFPCG*EAPSPS
Trigger: AGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACAC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTAACTTCTCCTCCATCTaGATCTTCAGGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCNFSSI*IFRASI
Trigger: GATGGACGCCCTGAAGATCCAGATGGAGGAGAAGTT...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGACTGTCATAGGAGGGTaGGAAGGAAGTGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLTVIGG*EGSGGD
Trigger: ATCTCCTCCACTTCCTTCCCACCCTCCTATGACAGT...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTATGTTGAAGAGCGAGTaGACCAGAATCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAAMLKSE*TRIFTA
Trigger: GGCTGTGAAGATTCTGGTTCACTCGCTCTTCAACAT...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATTCCGTTTTCTCCTCTTaGTTCTTCTCTCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDSVFSS*FFSHGC
Trigger: ACAGCCATGAGAGAAGAAGCAAGAGGAGAAAACGGA...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGTCATGTCTGCTGTGCTaGCCTCGGAGCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQSCLLC*PRSNCP
Trigger: AGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGA...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGTGACGTCAAAGGCCTaGTTGGTCACAATGTCGAAT +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLVTSKA*LVTMSN
Trigger: ATTCGACATTGTGACCAAGCAGGCCTTTGACGTCAC...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAGAACAGACTTCCGGCTaGTCCATAGACACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKEQTSG*SIDTLV
Trigger: AACAAGAGTGTCTATGGAGCAGCCGGAAGTCTGTTC...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
3UTR CAA 72 bp ACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATaGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TLLFRVKKRQRE*LPMSMEKSLVL
Trigger: AAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCTTTATTCAGTACGATaGAAGTCTTTTGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSLYSVR*KSFGCY
Trigger: ATAGCACCCAAAAGACTTTCATCGTACTGAATAAAG...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCCTGTTACCTCAGGGTaGCAGTTCTCTATGTTAAAA +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDPVTSG*QFSMLK
Trigger: TTTTAACATAGAGAACTGTCACCCTGAGGTAACAGG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCATCAGGCGGAAGAGTaGAAGAAAGGCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQHQAEE*KKGPGK
Trigger: TTTGCCTGGGCCTTTCTTGCACTCTTCCGCCTGATG...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGACTGGATTCCACTTCTaGTTTGAGAACAGACTTCCG +
Preference number: 4 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLTGFHF*FENRLP
Trigger: CGGAAGTCTGTTCTCAAAGCAGAAGTGGAATCCAGT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTACTGACAATATGACCTaGGTGAAAACACAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAATDNMT*VKTQGE
Trigger: TTCCCCCTGTGTTTTCACGCAGGTCATATTGTCAGT...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGTGTACTCGACATACTTaGTCCAGGGTGGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQCTRHT*SRVEGR
Trigger: ACGACCCTCCACCCTGGACCAAGTATGTCGAGTACA...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAGCAGGTAATTTTCTaGATCACTGAGGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDEQVIF*ITEVKV
Trigger: GACCTTTACCTCAGTGATCCAGAAAATTACCTGCTC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGATCTTGTTGTTCACGATaGTGTAGTTCAAAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRSCCSR*CSSKAS
Trigger: ACTTGCCTTTGAACTACACCATCGTGAACAACAAGA...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTCTTGAAGGTCATCTCTaGTGTGAAAATCCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAALEGHL*CENPCE
Trigger: TTCACAGGGATTTTCACAGCAGAGATGACCTTCAAG...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGAGCAGGTAATTTTCTaGATCACTGAGGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLEQVIF*ITEVKV
Trigger: GACCTTTACCTCAGTGATCCAGAAAATTACCTGCTC...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGAGAGACAGCGTGAATTaGTGCCCATGTCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQRDSVN*CPCPWK
Trigger: TTTCCATGGACATGGGCAGCAATTCACGCTGTCTCT...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CCA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTCTTGTTGTTCACGATaGTGTAGTTCAAAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ESPFTTYTVSVLYFASAASCCSR*CSSKAS
Trigger: ACTTGCCTTTGAACTACACCATCGTGAACAACAAGA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCTTTATTCAGTACGATaGAAGTCTTTTGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLLYSVR*KSFGCY
Trigger: ATAGCACCCAAAAGACTTTCATCGTACTGAATAAAG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR GCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGACAGCGTGAATTGCTaGCCATGTCCATGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQDSVNC*PCPWKN
Trigger: ATTTTTCCATGGACATGGGCAGCAATTCACGCTGTC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR TCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGTCTTGGCCAAGATGTTaGTTTTCTCAGGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQSWPRC*FSQDFG
Trigger: ACCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGA...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR TCA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGAATACTCAATAAACTaGGTGGCCTCTGGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQEYSIN*VASGSN
Trigger: ATTTGACCCAGAGGCCACTCAGTTTATTGAGTATTC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS CCA 90 bp TGGAGGGCGTGGCCAGGAGCCGAGGTTCCGGGACTGGGCTGTCCCTaGGCACTGGTCCGGCGCAGGGGCCAGGGCACCAGCAGTGATGTG +
Preference number: 5 (lower is better)
Translates to: WRAWPGAEVPGLGCP*ALVRRRGQGTSSDV
Trigger: CACATCACTGCTGGTGCCCTGGCCCCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGGCTCCTGGCCACGCCCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 90 bp GTCGGCCTGAGATGCACTGGCCTCGGCCTCAGAGGAGGCAGTCGCTaGCACCTGGCTCCAGGTCCTGGAATCCGGAGGGGCCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: VGLRCTGLGLRGGSR*HLAPGPGIRRGLWA
Trigger: GGCCCAGAGGCCCCTCCGGATTCCAGGACCTGGAGCCAGGTGTCAGCGACTGCCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS TCA 90 bp CCTGGGGCCTGGGGTTCCGCTTTCCACTGCTGCCGCCAGTCGGCCTaGGATGCACTGGCCTCGGCCTCAGAGGAGGCAGTCGCTGACACC +
Preference number: 5 (lower is better)
Translates to: PGAWGSAFHCCRQSA*DALASASEEAVADT
Trigger: GGTGTCAGCGACTGCCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCGACTGGCGGCAGCAGTGGAAAGCGGAACCCCAGGCCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS CCA 90 bp GGCTCCTCGAAGCCATCTACACACGGAGCCTGGGAGGTCAGCATCTaGGGCCCGCCTGGCTCCTCCGATGGCGTGGTCGTGTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: GSSKPSTHGAWEVSI*GPPGSSDGVVVSGG
Trigger: CCCGCCAGACACGACCACGCCATCGGAGGAGCCAGGCGGGCCCCAGATGCTGACCTCCCAGGCTCCGTGTGTAGATGGCTTCGAGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 90 bp GCCGCTGCCGCAGGAGACCACAGCAGAAATCCCAGGTGGTCCGCTTaGCAAAGCGCAGGCCCCTCTGGATGCGGGCCAGGGCCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: AAAAGDHSRNPRWSA*QSAGPSGCGPGPAG
Trigger: TCCAGCTGGCCCTGGCCCGCATCCAGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGATTTCTGCTGTGGTCTCCTGCGGCAGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS GCA 90 bp CAGTGCGCTGGTGAGGACGCTGACTGCGCTGAGGGCCCGCTGCCGTaGTCCTGGCTCCTCGAAGCCATCTACACACGGAGCCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: QCAGEDADCAEGPLP*SWLLEAIYTRSLGG
Trigger: ACCTCCCAGGCTCCGTGTGTAGATGGCTTCGAGGAGCCAGGAGCACGGCAGCGGGCCCTCAGCGCAGTCAGCGTCCTCACCAGCGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 90 bp GGGGTTCCGCTTTCCACTGCTGCCGCCAGTCGGCCTGAGATGCACTaGCCTCGGCCTCAGAGGAGGCAGTCGCTGACACCTGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GVPLSTAAASRPEMH*PRPQRRQSLTPGSR
Trigger: CCTGGAGCCAGGTGTCAGCGACTGCCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCGACTGGCGGCAGCAGTGGAAAGCGGAACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCGCCTCCACGGAGCCGTaGGTGCCGTTGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGASTEP*VPLSAV
Trigger: CACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGC...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGCGCAGCACCGACAAGTaGCTCATGCGGGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: PTARRGRLGAASPEPAGERSTDK*LMRDRP
Trigger: GGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGCG...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGGTGCCCTGGCCTGGTaGCTCGCCTTCCTCAAACCG +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQGALAW*LAFLKP
Trigger: CGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCACC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGGGTTGGGTCTGGGGTaGCCACCAAGGGAACTGGGG +
Preference number: 5 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVGLGLG*PPRELG
Trigger: CCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACCC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS GCA 90 bp GGCAGCCCCTCTCGGCTCTCCTGCAAGGTGGTTGAGCCGCGGGCTTaGTTCTCTGCCATGCGCTTCTCGATGGCTGCCAGGGACTCCCGT +
Preference number: 5 (lower is better)
Translates to: GSPSRLSCKVVEPRA*FSAMRFSMAARDSR
Trigger: ACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGGCAGAGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAGAGCCGAGAGGGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327956.6
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
ENST00000491944.1
CDS GCA 90 bp CGGCCACAGCGATGGGCACACACACGGGCTCTGGATCCCCGGGGGTaGCCTGGCCTGGTTGCTCGCCTTCCTCAAACCGTGTTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: RPQRWAHTRALDPRG*PGLVARLPQTVFPC
Trigger: GCAAGGAAACACGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCACCCCCGGGGATCCAGAGCCCGTGTGTGTGCCCATCGCTGTGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 90 bp GCTGGTGAGGACGCTGACTGCGCTGAGGGCCCGCTGCCGTGCTCCTaGCTCCTCGAAGCCATCTACACACGGAGCCTGGGAGGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: AGEDADCAEGPLPCS*LLEAIYTRSLGGQH
Trigger: ATGCTGACCTCCCAGGCTCCGTGTGTAGATGGCTTCGAGGAGCCAGGAGCACGGCAGCGGGCCCTCAGCGCAGTCAGCGTCCTCACCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 90 bp CCTGGCCTGGTTGCTCGCCTTCCTCAAACCGTGTTTCCTTGCGGGTaGGAGGCACCTTCTCCGTCTCTGGGGGTGGCGGGGAGTAGGGGG +
Preference number: 5 (lower is better)
Translates to: PGLVARLPQTVFPCG*EAPSPSLGVAGSRG
Trigger: CCCCCTACTCCCCGCCACCCCCAGAGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGAGGAAGGCGAGCAACCAGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 90 bp AGCAGGTCTTGCGCAACCGCCACCAGACCTTCCCTGGGGCCTGTGTaGTGTCCACCGCACAGCAGGGACAGCGCCGGACACAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: SRSCATATRPSLGPV*CPPHSRDSAGHSLQ
Trigger: CTGAAGGCTGTGTCCGGCGCTGTCCCTGCTGTGCGGTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGGCGGTTGCGCAAGACCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGCGCAGCACCGACAAGTaGCTCATGCGGGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVRSTDK*LMRDRP
Trigger: GGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGCG...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGGTGCCCTGGCCTGGTaGCTCGCCTTCCTCAAACCG +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRGALAW*LAFLKP
Trigger: CGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCACC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGAGCGTCCGCAGTGACTaGATGGGGCCCATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: PTARRGRLGAASPEPAGESVRSD*MGPISA
Trigger: TGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAGCGTCCGCAGTGACTaGATGGGGCCCATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQSVRSD*MGPISA
Trigger: TGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCT...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGACACCTCTTCGTGCTaGCGCCGGAGTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQDTSSC*RRSVVV
Trigger: CACCACCACACTCCGGCGCAAGCACGAAGAGGTGTC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS CCA 90 bp GTGGTCGTGTCTGGCGGGTGCTCTAGCATCACAGGGCGGAGGAGGTaGCTTCCTGGGGATGTGGCCTCTGGGTCGCCTGCCCCCAGTAAT +
Preference number: 5 (lower is better)
Translates to: VVVSGGCSSITGRRR*LPGDVASGSPAPSN
Trigger: ATTACTGGGGGCAGGCGACCCAGAGGCCACATCCCCAGGAAGCCACCTCCTCCGCCCTGTGATGCTAGAGCACCCGCCAGACACGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 90 bp ACAGCGATGGGCACACACACGGGCTCTGGATCCCCGGGGGTGCCCTaGCCTGGTTGCTCGCCTTCCTCAAACCGTGTTTCCTTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: TAMGTHTGSGSPGVP*PGCSPSSNRVSLRV
Trigger: CACCCGCAAGGAAACACGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCACCCCCGGGGATCCAGAGCCCGTGTGTGTGCCCATCGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGCCTCCACGGAGCCGTaGGTGCCGTTGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSASTEP*VPLSAV
Trigger: CACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCGCAGGGCAGCCAGCTaGACAATACACTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQRRAAS*TIHSPV
Trigger: CACAGGCGAGTGTATTGTCAAGCTGGCTGCCCTGCG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
CDS-3UTR CAA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGGACACCTCTTCGTGCTaGCGCCGGAGTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLDTSSC*RRSVVV
Trigger: CACCACCACACTCCGGCGCAAGCACGAAGAGGTGTC...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGCAGAGCCGCAGGGCATaGCCTGACCAGACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: QAQANCSGCPRGATELCLQSRRA*PDQTRS
Trigger: TGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTG...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGGGGACCACCTGGATCTaGCCCCAAAGAGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PTARRGRLGAASPEPAGEGTTWI*PQRGPL
Trigger: CAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCCC...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS TCA 90 bp GTGGGCCAAGGGGTCGGGAGAAGTTCTCACTCATCACGTAGGCGATaGGGCCCTCTCGCTCAGGGGCATCCTCTTCGGAGAGGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: VGQGVGRSSHSSRRR*GPLAQGHPLRRGRC
Trigger: GCAGCGGCCTCTCCGAAGAGGATGCCCCTGAGCGAGAGGGCCTCATCGCCTACGTGATGAGTGAGAACTTCTCCCGACCCCTTGGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS GCA 90 bp GGATCTGCTCCAGGAGCTCAGCGGTGTTGGTCATGTCTGCTGTGCTaGCCTCGGAGCAACTGTCCTCTGGGGTCTCACCGCACCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GSAPGAQRCWSCLLC*PRSNCPLGSHRTLG
Trigger: CCCCAGGGTGCGGTGAGACCCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTGTGGGCGGCTGCTGCTaGGCGCGGACTCGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFVGGCC*ARTRLG
Trigger: GCCGAGCCGAGTCCGCGCCAAGCAGCAGCCGCCCAC...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTTCTCCTGCAAGGTGGTaGAGCCGCGGGCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: AQANCSGCPRGATELCLVSPARW*SRGLAS
Trigger: AGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAGA...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCTCTCCTGCAAGGTGGTaGAGCCGCGGGCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGSPARW*SRGLAS
Trigger: AGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAGA...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGTGTACTCGACATACTaGGTCCAGGGTGGAGGGTCG +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQVYSTY*VQGGGS
Trigger: CGACCCTCCACCCTGGACCAAGTATGTCGAGTACAC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGCCTCCACGGAGCCGTaGGTGCCGTTGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCASTEP*VPLSAV
Trigger: CACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCCTCCACGGAGCCGTaGGTGCCGTTGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHASTEP*VPLSAV
Trigger: CACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCATCCCAGGTGGTCCGCTaGACAAAGCGCAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: PLRARELGLTIPFPAQGASQVVR*TKRRPL
Trigger: GAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGA...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGTCAAACCGTGTTTCCTaGCGGGTGGGAGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQSNRVS*RVGGTF
Trigger: GAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGA...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATGGCCAGTCCTCTGGGTCCTaGACATCCTGGCCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PWEIASFLSSGRLRGRHGQSSGS*TSWPRS
Trigger: TGACCTCGGCCAGGATGTCAAGGACCCAGAGGACTG...GCCATGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCCAGTCCTCTGGGTCCTaGACATCCTGGCCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRQSSGS*TSWPRS
Trigger: TGACCTCGGCCAGGATGTCAAGGACCCAGAGGACTG...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCAGTCCTCTGGGTCCTaGACATCCTGGCCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLQSSGS*TSWPRS
Trigger: TGACCTCGGCCAGGATGTCAAGGACCCAGAGGACTG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTCAGTCCTCTGGGTCCTaGACATCCTGGCCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSQSSGS*TSWPRS
Trigger: TGACCTCGGCCAGGATGTCAAGGACCCAGAGGACTG...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTCGCAGGGCAGCCAGCTaGACAATACACTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSRRAAS*TIHSPV
Trigger: CACAGGCGAGTGTATTGTCAAGCTGGCTGCCCTGCG...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTGGCCGTGAATGGGGCTaGCACCCTTGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSGREWG*HPCVLW
Trigger: CCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCC...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS GCA 90 bp CAGGGATCTGCTCCAGGAGCTCAGCGGTGTTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGTCCTCTGGGGTCTCACCGCACCCTG +
Preference number: 5 (lower is better)
Translates to: QGSAPGAQRCWSCLL*CPRSNCPLGSHRTL
Trigger: CAGGGTGCGGTGAGACCCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS CCA 90 bp CATCCTGGCCGAGGTCAGGGATCTGCTCCAGGAGCTCAGCGGTGTTaGTCATGTCTGCTGTGCTGCCCTCGGAGCAACTGTCCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: HPGRGQGSAPGAQRC*SCLLCCPRSNCPLG
Trigger: CCCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGGCCAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCACTCTCCGATGAGCTCTaGGGGTGGATTGCCATAGAG +
Preference number: 5 (lower is better)
Translates to: SPPTARRGRLGAASPEPALSDEL*GWIAIE
Trigger: CTCTATGGCAATCCACCCCAAGAGCTCATCGGAGAG...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCCTCTCCGATGAGCTCTaGGGGTGGATTGCCATAGAG +
Preference number: 5 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLLSDEL*GWIAIE
Trigger: CTCTATGGCAATCCACCCCAAGAGCTCATCGGAGAG...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGCCATGAACACGCAGTaGGTGAGGATGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: SPPTARRGRLGAASPEPAAMNTQ*VRMVHM
Trigger: CATGTGCACCATCCTCACCAACTGCGTGTTCATGGC...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTACTCGACATACTaGGTCCAGGGTGGAGGGTCG +
Preference number: 5 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSVYSTY*VQGGGS
Trigger: CGACCCTCCACCCTGGACCAAGTATGTCGAGTACAC...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTGTACTCGACATACTaGGTCCAGGGTGGAGGGTCG +
Preference number: 5 (lower is better)
Translates to: QAQANCSGCPRGATELCLVYSTY*VQGGGS
Trigger: CGACCCTCCACCCTGGACCAAGTATGTCGAGTACAC...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGTGTACTCGACATACTaGGTCCAGGGTGGAGGGTCG +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRVYSTY*VQGGGS
Trigger: CGACCCTCCACCCTGGACCAAGTATGTCGAGTACAC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGCCTCCACGGAGCCGTaGGTGCCGTTGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLASTEP*VPLSAV
Trigger: CACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGCCTCCACGGAGCCGTaGGTGCCGTTGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRASTEP*VPLSAV
Trigger: CACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGCTCAGCGATGGTGGCTaGGTTTTGCTCCTCATAGGC +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQLSDGG*VLLLIG
Trigger: GCCTATGAGGAGCAAAACCAAGCCACCATCGCTGAG...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCACTCAGCGATGGTGGCTaGGTTTTGCTCCTCATAGGC +
Preference number: 5 (lower is better)
Translates to: SPPTARRGRLGAASPEPALSDGG*VLLLIG
Trigger: GCCTATGAGGAGCAAAACCAAGCCACCATCGCTGAG...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACAGTGCTGTTCTTTTaGCCATGGAGGGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PTARRGRLGAASPEPAGETVLFF*PWRAWP
Trigger: TGGCCACGCCCTCCATGGCAAAAAGAACAGCACTGT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAACAGTGCTGTTCTTTTaGCCATGGAGGGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SPPTARRGRLGAASPEPATVLFF*PWRAWP
Trigger: TGGCCACGCCCTCCATGGCAAAAAGAACAGCACTGT...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGAACTTCACTCCCTGCTaGATGGACATCCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVNFTPC*MDIHSG
Trigger: CCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGTT...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGTCAAACCGTGTTTCCTaGCGGGTGGGAGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: QAQANCSGCPRGATELCLSNRVS*RVGGTF
Trigger: GAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGA...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAGGTGCCCTGGCCTGGTaGCTCGCCTTCCTCAAACCG +
Preference number: 5 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPGALAW*LAFLKP
Trigger: CGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCACC...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGTACCCGGCCCCCACGTaGTCAAAGTTGACTTTCACC +
Preference number: 5 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVYPAPT*SKLTFT
Trigger: GGTGAAAGTCAACTTTGACAACGTGGGGGCCGGGTA...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCATGAAGCCCTGGTACTaGTTCAGGGGCCGTGGGATG +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRMKPWY*FRGRGM
Trigger: CATCCCACGGCCCCTGAACAAGTACCAGGGCTTCAT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACCAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHQNSAW*IRGAEA
Trigger: GGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTG...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAGGGTTGGGTCTGGGGTaGCCACCAAGGGAACTGGGG +
Preference number: 5 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPGLGLG*PPRELG
Trigger: CCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACCC...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS GCA 90 bp GAGGTCAGGGATCTGCTCCAGGAGCTCAGCGGTGTTGGTCATGTCTaGTGTGCTGCCCTCGGAGCAACTGTCCTCTGGGGTCTCACCGCA +
Preference number: 5 (lower is better)
Translates to: EVRDLLQELSGVGHV*CAALGATVLWGLTA
Trigger: TGCGGTGAGACCCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCCCTGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGCAGGCTCTCCTCACGTaGCCTGTGGGGAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVQALLT*PVGKLL
Trigger: CAGCAGCTTCCCCACAGGCAACGTGAGGAGAGCCTG...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTCTCTCCGATGAGCTCTaGGGGTGGATTGCCATAGAG +
Preference number: 5 (lower is better)
Translates to: AQANCSGCPRGATELCLVLSDEL*GWIAIE
Trigger: CTCTATGGCAATCCACCCCAAGAGCTCATCGGAGAG...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGCTCTCCGATGAGCTCTaGGGGTGGATTGCCATAGAG +
Preference number: 5 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVLSDEL*GWIAIE
Trigger: CTCTATGGCAATCCACCCCAAGAGCTCATCGGAGAG...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTGCCATGAACACGCAGTaGGTGAGGATGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSAMNTQ*VRMVHM
Trigger: CATGTGCACCATCCTCACCAACTGCGTGTTCATGGC...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGTTGAGCGCTGTGAAGTaGCGCACGCACTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLLSAVK*RTHLCL
Trigger: AAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAA...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGAGCCGTTGGTGCCGTaGAGCGCTGTGAAGTTGCGC +
Preference number: 5 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLEPLVP*SAVKLR
Trigger: GCGCAACTTCACAGCGCTCAACGGCACCAACGGCTC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGAGCCGTTGGTGCCGTaGAGCGCTGTGAAGTTGCGC +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHEPLVP*SAVKLR
Trigger: GCGCAACTTCACAGCGCTCAACGGCACCAACGGCTC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTACAGTGCTGTTCTTTTaGCCATGGAGGGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: AQANCSGCPRGATELCLVTVLFF*PWRAWP
Trigger: TGGCCACGCCCTCCATGGCAAAAAGAACAGCACTGT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTACAGTGCTGTTCTTTTaGCCATGGAGGGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSTVLFF*PWRAWP
Trigger: TGGCCACGCCCTCCATGGCAAAAAGAACAGCACTGT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTCAGCATGGTGGACACTaGTGGCGAGACTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: AQANCSGCPRGATELCLVQHGGH*WRDSSN
Trigger: GTTAGAGGAGTCTCGCCACAAGTGTCCACCATGCTG...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTAACTTCACTCCCTGCTaGATGGACATCCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: AQANCSGCPRGATELCLVNFTPC*MDIHSG
Trigger: CCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGTT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCACGCAGCACCGACAAGTaGCTCATGCGGGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPRSTDK*LMRDRP
Trigger: GGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGCG...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCATCAAACCGTGTTTCCTaGCGGGTGGGAGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPSNRVS*RVGGTF
Trigger: GAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGA...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGCAAAGCCCAGGGTGTaGGCCACCAGGCTGACCAGA +
Preference number: 5 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLAKPRV*ATRLTR
Trigger: TCTGGTCAGCCTGGTGGCCAACACCCTGGGCTTTGC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCAAAGCCCAGGGTGTaGGCCACCAGGCTGACCAGA +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHAKPRV*ATRLTR
Trigger: TCTGGTCAGCCTGGTGGCCAACACCCTGGGCTTTGC...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGAGCGTCCGCAGTGACTaGATGGGGCCCATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLSVRSD*MGPISA
Trigger: TGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCT...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGTACCCGGCCCCCACGTaGTCAAAGTTGACTTTCACC +
Preference number: 5 (lower is better)
Translates to: QAQANCSGCPRGATELCLYPAPT*SKLTFT
Trigger: GGTGAAAGTCAACTTTGACAACGTGGGGGCCGGGTA...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGGACACCTCTTCGTGCTaGCGCCGGAGTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: QEQGQAACQAVNGACTLVDTSSC*RRSVVV
Trigger: CACCACCACACTCCGGCGCAAGCACGAAGAGGTGTC...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGACACCTCTTCGTGCTaGCGCCGGAGTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRDTSSC*RRSVVV
Trigger: CACCACCACACTCCGGCGCAAGCACGAAGAGGTGTC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGATGCTTCAAAGAGCGTaGCAGCAGGTGCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: QAQANCSGCPRGATELCLMLQRA*QQVPAE
Trigger: TTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCAT...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCAGAGCCGCAGGGCATaGCCTGACCAGACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRQSRRA*PDQTRS
Trigger: TGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTG...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTCAGAGCCGCAGGGCATaGCCTGACCAGACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCQSRRA*PDQTRS
Trigger: TGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTG...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGGGTTGGGTCTGGGGTaGCCACCAAGGGAACTGGGG +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTGLGLG*PPRELG
Trigger: CCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACCC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGGGTTGGGTCTGGGGTaGCCACCAAGGGAACTGGGG +
Preference number: 5 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRGLGLG*PPRELG
Trigger: CCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACCC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGACAACATCTGGCACTaGATGTCTGTCCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQDNIWH*MSVLPS
Trigger: GGAGGGAAGGACAGACATCAAGTGCCAGATGTTGTC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTCCTCTGGGGTCTGCTaGCTGGACTCCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHSSGVC*LDSSSV
Trigger: CACGGAGGAGGAGTCCAGCAAGCAGACCCCAGAGGA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450102.6
CDS GCA 90 bp AAGCAGTCCTCTGGGTCCTTGACATCCTGGCCGAGGTCAGGGATCTaGTCCAGGAGCTCAGCGGTGTTGGTCATGTCTGCTGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: KQSSGSLTSWPRSGI*SRSSAVLVMSAVLP
Trigger: GGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGGCCAGGATGTCAAGGACCCAGAGGACTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS GCA 90 bp CAGGGATCTGCTCCAGGAGCTCAGCGGTGTTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGTCCTCTGGGGTCTGCTTGCTGGACT +
Preference number: 5 (lower is better)
Translates to: QGSAPGAQRCWSCLL*CPRSNCPLGSACWT
Trigger: AGTCCAGCAAGCAGACCCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449557.6
ENST00000450102.6
CDS GCA 90 bp GAGGTCAGGGATCTGCTCCAGGAGCTCAGCGGTGTTGGTCATGTCTaGTGTGCTGCCCTCGGAGCAACTGTCCTCTGGGGTCTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: EVRDLLQELSGVGHV*CAALGATVLWGLLA
Trigger: AGCAAGCAGACCCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCCCTGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449557.6
ENST00000450102.6
CDS GCA 90 bp GAATCAAACCACAGTTATTGGGAATTACAAAGCAGAACCACCGCCTaGCCTCCCCGACCAGCCCTCTCCCTTGGCCCCCTCCCACGGGGG +
Preference number: 5 (lower is better)
Translates to: ESNHSYWELQSRTTA*PPRPALSLGPLPRG
Trigger: CCCCCGTGGGAGGGGGCCAAGGGAGAGGGCTGGTCGGGGAGGGCAGGCGGTGGTTCTGCTTTGTAATTCCCAATAACTGTGGTTTGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS-3UTR CAA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGTCTCCTGCAAGGTGGTaGAGCCGCGGGCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QEQGQAACQAVNGACTLVSPARW*SRGLAS
Trigger: AGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAGA...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAAAGTTGCGCACGCACTaGTGCCTTAGGTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPKLRTH*CLRLPM
Trigger: CATGGGCAACCTAAGGCACAAGTGCGTGCGCAACTT...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCACTCAGCGATGGTGGCTaGGTTTTGCTCCTCATAGGC +
Preference number: 5 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPLSDGG*VLLLIG
Trigger: GCCTATGAGGAGCAAAACCAAGCCACCATCGCTGAG...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGCCTCGTGTTCTTTCTaGAGCATTTCCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: QAQANCSGCPRGATELCLASCSF*SISMAS
Trigger: GGAGGCCATGGAAATGCTCAAGAAAGAACACGAGGC...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGGCCTCGTGTTCTTTCTaGAGCATTTCCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLASCSF*SISMAS
Trigger: GGAGGCCATGGAAATGCTCAAGAAAGAACACGAGGC...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGTCGAGGGCAATGATCTaGAAGGTCATCTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PTARRGRLGAASPEPAGESRAMI*KVISAV
Trigger: CACAGCAGAGATGACCTTCAAGATCATTGCCCTCGA...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGGATGTTCCAGCCCTGTaGGAAGTAGTAGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVDVPAL*EVVVGV
Trigger: GACCCCTACTACTACTTCCAACAGGGCTGGAACATC...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGGATGTTCCAGCCCTGTaGGAAGTAGTAGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: RRGRLGAASPEPAGETEVDVPAL*EVVVGV
Trigger: GACCCCTACTACTACTTCCAACAGGGCTGGAACATC...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCCCAGGTGGTCCGCTaGACAAAGCGCAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRSQVVR*TKRRPL
Trigger: GAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTCCCAGGTGGTCCGCTaGACAAAGCGCAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSISQVVR*TKRRPL
Trigger: GAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGA...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACCAGTCCTCTGGGTCCTaGACATCCTGGCCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHQSSGS*TSWPRS
Trigger: TGACCTCGGCCAGGATGTCAAGGACCCAGAGGACTG...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTACTCAAGCAGAACCTaGATGGTCTTCCGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLYSSRT*MVFRSS
Trigger: AGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGTA...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGGCAAAGCCCAGGGTGTaGGCCACCAGGCTGACCAGA +
Preference number: 5 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRAKPRV*ATRLTR
Trigger: TCTGGTCAGCCTGGTGGCCAACACCCTGGGCTTTGC...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTAGCGTCCGCAGTGACTaGATGGGGCCCATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLSVRSD*MGPISA
Trigger: TGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCT...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGCCCACGTTGTCAAAGTaGACTTTCACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVPTLSK*TFTLVQ
Trigger: CTGGACCAAGGTGAAAGTCAACTTTGACAACGTGGG...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAATGAAGCCCTGGTACTaGTTCAGGGGCCGTGGGATG +
Preference number: 5 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSMKPWY*FRGRGM
Trigger: CATCCCACGGCCCCTGAACAAGTACCAGGGCTTCAT...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGCGCAGGGCAGCCAGCTaGACAATACACTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: QEQGQAACQAVNGACTLVRRAAS*TIHSPV
Trigger: CACAGGCGAGTGTATTGTCAAGCTGGCTGCCCTGCG...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCCAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIQNSAW*IRGAEA
Trigger: GGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTG...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCACAGAGCCGCAGGGCATaGCCTGACCAGACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPQSRRA*PDQTRS
Trigger: TGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTG...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGGATTCCACTTCTGCTTaGAGAACAGACTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVDSTSA*RTDFRL
Trigger: CAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAATC...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGGATTCCACTTCTGCTTaGAGAACAGACTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQDSTSA*RTDFRL
Trigger: CAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAATC...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGGCCGTGAATGGGGCTaGCACCCTTGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCGREWG*HPCVLW
Trigger: CCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAGGGACCACCTGGATCTaGCCCCAAAGAGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPGTTWI*PQRGPL
Trigger: CAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCCC...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGACTGAGGTGGACAACATCTGGCACTaGATGTCTGTCCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: RRGRLGAASPEPAGETEVDNIWH*MSVLPS
Trigger: GGAGGGAAGGACAGACATCAAGTGCCAGATGTTGTC...CACCTCAGTCTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGGCTGGGATTCCTGCTaGCTGGACTCCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTGWDSC*LDSSSV
Trigger: CACGGAGGAGGAGTCCAGCAAGCAGGAATCCCAGCC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423572.7
ENST00000455624.6
CDS TCA 90 bp GCTTCTCTGCCATGCGCTTCTCGATGGCTGCCAGGGACTCCCGTGTaGACCTGCGGAAGCTGCTGGTGCCCCGAGGTAATAGGAAGTTTG +
Preference number: 5 (lower is better)
Translates to: ASLPCASRWLPGTPV*TCGSCWCPEVIGSL
Trigger: CAAACTTCCTATTACCTCGGGGCACCAGCAGCTTCCGCAGGTTCACACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGGCAGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327956.6
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
ENST00000491944.1
CDS TCA 90 bp CGTGCCCAGGCTGTTCTCCTCATCTTCTTCTTGGTCATCTGTGTCTaGCTCGGCCACAGCGATGGGCACACACACGGGCTCTGGATCCCC +
Preference number: 5 (lower is better)
Translates to: RAQAVLLIFFLVICV*LGHSDGHTHGLWIP
Trigger: GGGGATCCAGAGCCCGTGTGTGTGCCCATCGCTGTGGCCGAGTCAGACACAGATGACCAAGAAGAAGATGAGGAGAACAGCCTGGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 90 bp CAGGTCTCGCCTGCGAAAGGTGAAAATGCTCCCGCGGCTGGAACGTaGCTTCATAGAAGTCCTGCTGAGGCCACGGGTGAGGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: QVSPAKGENAPAAGT*LHRSPAEATGEAEM
Trigger: CATCTCAGCCTCACCCGTGGCCTCAGCAGGACTTCTATGAAGCCACGTTCCAGCCGCGGGAGCATTTTCACCTTTCGCAGGCGAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCAGGCTCTCCTCACGTaGCCTGTGGGGAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRQALLT*PVGKLL
Trigger: CAGCAGCTTCCCCACAGGCAACGTGAGGAGAGCCTG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCACTCTCCGATGAGCTCTaGGGGTGGATTGCCATAGAG +
Preference number: 5 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSLSDEL*GWIAIE
Trigger: CTCTATGGCAATCCACCCCAAGAGCTCATCGGAGAG...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGTGTACTCGACATACTaGGTCCAGGGTGGAGGGTCG +
Preference number: 5 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLVYSTY*VQGGGS
Trigger: CGACCCTCCACCCTGGACCAAGTATGTCGAGTACAC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAAAGTTGCGCACGCACTaGTGCCTTAGGTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSKLRTH*CLRLPM
Trigger: CATGGGCAACCTAAGGCACAAGTGCGTGCGCAACTT...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGAGCCGTTGGTGCCGTaGAGCGCTGTGAAGTTGCGC +
Preference number: 5 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHREPLVP*SAVKLR
Trigger: GCGCAACTTCACAGCGCTCAACGGCACCAACGGCTC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCACAGCATGGTGGACACTaGTGGCGAGACTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: PLRARELGLTIPFPAQGAQHGGH*WRDSSN
Trigger: GTTAGAGGAGTCTCGCCACAAGTGTCCACCATGCTG...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTTCGAGGGCAATGATCTaGAAGGTCATCTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: AQANCSGCPRGATELCLVSRAMI*KVISAV
Trigger: CACAGCAGAGATGACCTTCAAGATCATTGCCCTCGA...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTTCGAGGGCAATGATCTaGAAGGTCATCTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSSRAMI*KVISAV
Trigger: CACAGCAGAGATGACCTTCAAGATCATTGCCCTCGA...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGTTCAGGACCACAAGGTaGCCAATGACCATAACAAGC +
Preference number: 5 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVFRTTR*PMTITS
Trigger: GCTTGTTATGGTCATTGGCAACCTTGTGGTCCTGAA...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTTCCCAGGTGGTCCGCTaGACAAAGCGCAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFSQVVR*TKRRPL
Trigger: GAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGA...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCATCAAACCGTGTTTCCTaGCGGGTGGGAGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPSNRVS*RVGGTF
Trigger: GAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGA...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGTCAAACCGTGTTTCCTaGCGGGTGGGAGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAESNRVS*RVGGTF
Trigger: GAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGA...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCTGGGATTCCTGCTGCTaGCTGGACTCCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTWDSCC*LDSSSV
Trigger: CACGGAGGAGGAGTCCAGCAAGCAGCAGGAATCCCA...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CAA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCAGGAGCTCAGCGGTGTaGGTCATGTCTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSRSSAV*VMSAVL
Trigger: CAGCACAGCAGACATGACCAACACCGCTGAGCTCCT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGCCCACGTTGTCAAAGTaGACTTTCACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLPTLSK*TFTLVQ
Trigger: CTGGACCAAGGTGAAAGTCAACTTTGACAACGTGGG...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGATGAAGCCCTGGTACTaGTTCAGGGGCCGTGGGATG +
Preference number: 5 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTMKPWY*FRGRGM
Trigger: CATCCCACGGCCCCTGAACAAGTACCAGGGCTTCAT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCATGGGCAGGTCCATGTaGATGAGGCTTATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRMGRSM*MRLIWL
Trigger: CAACCAGATAAGCCTCATCAACATGGACCTGCCCAT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFQNSAW*IRGAEA
Trigger: GGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCGATTCCACTTCTGCTTaGAGAACAGACTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRDSTSA*RTDFRL
Trigger: CAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAATC...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGATGGGGCTTGCACCCTaGTGTCCTTTGGTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: PTARRGRLGAASPEPAGEMGLAP*CPLVLL
Trigger: TAACAAAACCAAAGGACACAAGGGTGCAAGCCCCAT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp TCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGATGGGGCTTGCACCCTaGTGTCCTTTGGTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: SEASKHRPTAPAVHAAPQMGLAP*CPLVLL
Trigger: TAACAAAACCAAAGGACACAAGGGTGCAAGCCCCAT...CTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGGCCGTGAATGGGGCTaGCACCCTTGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTGREWG*HPCVLW
Trigger: CCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCGGGACCACCTGGATCTaGCCCCAAAGAGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTGTTWI*PQRGPL
Trigger: CAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCCC...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGGCTGGGATTCCTGCTaGCTGGACTCCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRGWDSC*LDSSSV
Trigger: CACGGAGGAGGAGTCCAGCAAGCAGGAATCCCAGCC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTGTGGGCGGCTGCTGCTaGGCGCGGACTCGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCVGGCC*ARTRLG
Trigger: GCCGAGCCGAGTCCGCGCCAAGCAGCAGCCGCCCAC...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGCCATGAACACGCAGTaGGTGAGGATGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: GAGDHTENSSAYGPESPGAMNTQ*VRMVHM
Trigger: CATGTGCACCATCCTCACCAACTGCGTGTTCATGGC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGGCCATGAACACGCAGTaGGTGAGGATGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTAMNTQ*VRMVHM
Trigger: CATGTGCACCATCCTCACCAACTGCGTGTTCATGGC...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGAAGTTGCGCACGCACTaGTGCCTTAGGTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTKLRTH*CLRLPM
Trigger: CATGGGCAACCTAAGGCACAAGTGCGTGCGCAACTT...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGTTGAGCGCTGTGAAGTaGCGCACGCACTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRLSAVK*RTHLCL
Trigger: AAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAA...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TCCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTGAGCGCTGTGAAGTaGCGCACGCACTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SHGLCLASVCEDCVCVLVLSAVK*RTHLCL
Trigger: AAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAA...CACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTCAGCGATGGTGGCTaGGTTTTGCTCCTCATAGGC +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRLSDGG*VLLLIG
Trigger: GCCTATGAGGAGCAAAACCAAGCCACCATCGCTGAG...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCAGCCTCGTGTTCTTTCTaGAGCATTTCCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PLRARELGLTIPFPAQGAASCSF*SISMAS
Trigger: GGAGGCCATGGAAATGCTCAAGAAAGAACACGAGGC...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGAACTTCACTCCCTGCTaGATGGACATCCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAENFTPC*MDIHSG
Trigger: CCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGTT...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCATCTCCTCGAATTCACTaGTCATGTTGTAGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: SPPTARRGRLGAASPEPASPRIH*SCCSAP
Trigger: TGGAGCACTACAACATGACAAGTGAATTCGAGGAGA...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGATGTTCCAGCCCTGTaGGAAGTAGTAGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSDVPAL*EVVVGV
Trigger: GACCCCTACTACTACTTCCAACAGGGCTGGAACATC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTTTCAGGACCACAAGGTaGCCAATGACCATAACAAGC +
Preference number: 5 (lower is better)
Translates to: AQANCSGCPRGATELCLVFRTTR*PMTITS
Trigger: GCTTGTTATGGTCATTGGCAACCTTGTGGTCCTGAA...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGTTCAGGACCACAAGGTaGCCAATGACCATAACAAGC +
Preference number: 5 (lower is better)
Translates to: HRPTAPAVHAAPQNSAWLFRTTR*PMTITS
Trigger: GCTTGTTATGGTCATTGGCAACCTTGTGGTCCTGAA...CAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCTTCAGGACCACAAGGTaGCCAATGACCATAACAAGC +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRFRTTR*PMTITS
Trigger: GCTTGTTATGGTCATTGGCAACCTTGTGGTCCTGAA...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCAAACCGTGTTTCCTaGCGGGTGGGAGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRSNRVS*RVGGTF
Trigger: GAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGA...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTGGGATTCCTGCTGCTaGCTGGACTCCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRWDSCC*LDSSSV
Trigger: CACGGAGGAGGAGTCCAGCAAGCAGCAGGAATCCCA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CAA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGAGGAGCTCAGCGGTGTaGGTCATGTCTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRRSSAV*VMSAVL
Trigger: CAGCACAGCAGACATGACCAACACCGCTGAGCTCCT...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGAGCTCAGCGGTGTaGGTCATGTCTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTRSSAV*VMSAVL
Trigger: CAGCACAGCAGACATGACCAACACCGCTGAGCTCCT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAGCAAAGCCCAGGGTGTaGGCCACCAGGCTGACCAGA +
Preference number: 5 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGAKPRV*ATRLTR
Trigger: TCTGGTCAGCCTGGTGGCCAACACCCTGGGCTTTGC...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGGTGAGAAGTTGACTTTCACCTaGGTCCAGTACAATTCTCCG +
Preference number: 5 (lower is better)
Translates to: PTARRGRLGAASPEPAGEKLTFT*VQYNSP
Trigger: CGGAGAATTGTACTGGACCAAGGTGAAAGTCAACTT...CTCACCTGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CCCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCAAGTTGACTTTCACCTaGGTCCAGTACAATTCTCCG +
Preference number: 5 (lower is better)
Translates to: PFPCTGRRAKLRSPLPCLKLTFT*VQYNSP
Trigger: CGGAGAATTGTACTGGACCAAGGTGAAAGTCAACTT...GAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGTACCCGGCCCCCACGTaGTCAAAGTTGACTTTCACC +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRYPAPT*SKLTFT
Trigger: GGTGAAAGTCAACTTTGACAACGTGGGGGCCGGGTA...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGATGAAGCCCTGGTACTaGTTCAGGGGCCGTGGGATG +
Preference number: 5 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRMKPWY*FRGRGM
Trigger: CATCCCACGGCCCCTGAACAAGTACCAGGGCTTCAT...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTACGTCAAAGGCCTGCTaGGTCACAATGTCGAATATG +
Preference number: 5 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSTSKAC*VTMSNM
Trigger: CATATTCGACATTGTGACCAAGCAGGCCTTTGACGT...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGACGTCAAAGGCCTGCTaGGTCACAATGTCGAATATG +
Preference number: 5 (lower is better)
Translates to: QAQANCSGCPRGATELCLTSKAC*VTMSNM
Trigger: CATATTCGACATTGTGACCAAGCAGGCCTTTGACGT...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCATGCTTCAAAGAGCGTaGCAGCAGGTGCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSMLQRA*QQVPAE
Trigger: TTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCAT...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACATGCTTCAAAGAGCGTaGCAGCAGGTGCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHMLQRA*QQVPAE
Trigger: TTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCAT...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAAAGAGACAGCGTGAATaGCTGCCCATGTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPKRQRE*LPMSME
Trigger: TTCCATGGACATGGGCAGCAATTCACGCTGTCTCTT...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAGATTCCACTTCTGCTTaGAGAACAGACTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPDSTSA*RTDFRL
Trigger: CAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAATC...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACATGGGGCTTGCACCCTaGTGTCCTTTGGTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHMGLAP*CPLVLL
Trigger: TAACAAAACCAAAGGACACAAGGGTGCAAGCCCCAT...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGGGGACCACCTGGATCTaGCCCCAAAGAGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGGTTWI*PQRGPL
Trigger: CAGAGGACCTCTTTGGGGCAAGATCCAGGTGGTCCC...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTCTCAGGCTTCGCCAGTaGACCCTGTTACCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLLRLRQ*TLLPQG
Trigger: ACCCTGAGGTAACAGGGTCAACTGGCGAAGCCTGAG...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CAGCCCCAGGCACCTGTCTCAAAGCTCCCGGGCTGTCCACACACACAAAAACCACTCAGGCTTCGCCAGTaGACCCTGTTACCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: QPQAPVSKLPGCPHTQKPLRLRQ*TLLPQG
Trigger: ACCCTGAGGTAACAGGGTCAACTGGCGAAGCCTGAG...TGGTTTTTGTGTGTGTGGACAGCCCGGGAGCTTTGAGACAGGTGCCTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS TCA 90 bp GGCAACCACTCTGCCACTCTCGCCACACCACTGGGACCCATGACATaGAACCACATGTGGAGTCTGGGGCTGGGGACACATCAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: GNHSATLATPLGPMT*NHMWSLGLGTHQSE
Trigger: TTCACTCTGATGTGTCCCCAGCCCCAGACTCCACATGTGGTTTCATGTCATGGGTCCCAGTGGTGTGGCGAGAGTGGCAGAGTGGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS GCA 90 bp CTGCTGGTGCCCCGAGGTAATAGGAAGTTTGCCATCTTCTCATCCTaGTTCTGGGCACAGGCTCTCCTCACGTTGCCTGTGGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LLVPRGNRKFAIFSS*FWAQALLTLPVGKL
Trigger: CAGCTTCCCCACAGGCAACGTGAGGAGAGCCTGTGCCCAGAAGCAGGATGAGAAGATGGCAAACTTCCTATTACCTCGGGGCACCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327956.6
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000491944.1
CDS CCA 90 bp GTGCCCCGAGGTAATAGGAAGTTTGCCATCTTCTCATCCTGCTTCTaGGCACAGGCTCTCCTCACGTTGCCTGTGGGGAAGCTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: VPRGNRKFAIFSSCF*AQALLTLPVGKLLV
Trigger: GACCAGCAGCTTCCCCACAGGCAACGTGAGGAGAGCCTGTGCCCAGAAGCAGGATGAGAAGATGGCAAACTTCCTATTACCTCGGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000491944.1
CDS-3UTR CAA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTGAGGTAATAGGAAGTTaGCCATCTTCTCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSEVIGS*PSSHPA
Trigger: AGCAGGATGAGAAGATGGCAAACTTCCTATTACCTC...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTCTCTCCGATGAGCTCTaGGGGTGGATTGCCATAGAG +
Preference number: 5 (lower is better)
Translates to: GAMVHSPLRARELGLTIPLSDEL*GWIAIE
Trigger: CTCTATGGCAATCCACCCCAAGAGCTCATCGGAGAG...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCTACGATGAAAGTCTTTaGGGTGCTATAGAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRYDESL*GAIEGV
Trigger: GACCCCTTCTATAGCACCCAAAAGACTTTCATCGTA...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTTTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTTACGATGAAAGTCTTTaGGGTGCTATAGAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: PFPAQGAGPSSAPHSHVSYDESL*GAIEGV
Trigger: GACCCCTTCTATAGCACCCAAAAGACTTTCATCGTA...AGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGCCATGAACACGCAGTaGGTGAGGATGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLAMNTQ*VRMVHM
Trigger: CATGTGCACCATCCTCACCAACTGCGTGTTCATGGC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGGTGTACTCGACATACTaGGTCCAGGGTGGAGGGTCG +
Preference number: 5 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRVYSTY*VQGGGS
Trigger: CGACCCTCCACCCTGGACCAAGTATGTCGAGTACAC...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCTTGAGCGCTGTGAAGTaGCGCACGCACTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTLSAVK*RTHLCL
Trigger: AAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAA...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGCCTCGTGTTCTTTCTaGAGCATTTCCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLASCSF*SISMAS
Trigger: GGAGGCCATGGAAATGCTCAAGAAAGAACACGAGGC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGGATGTTCCAGCCCTGTaGGAAGTAGTAGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: GAGDHTENSSAYGPESPGDVPAL*EVVVGV
Trigger: GACCCCTACTACTACTTCCAACAGGGCTGGAACATC...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGAAGTTGACTTTCACCTaGGTCCAGTACAATTCTCCG +
Preference number: 5 (lower is better)
Translates to: QAQANCSGCPRGATELCLKLTFT*VQYNSP
Trigger: CGGAGAATTGTACTGGACCAAGGTGAAAGTCAACTT...CAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCTACCCGGCCCCCACGTaGTCAAAGTTGACTTTCACC +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTYPAPT*SKLTFT
Trigger: GGTGAAAGTCAACTTTGACAACGTGGGGGCCGGGTA...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CTGTCTCCCTTAGGCTGGGAGCCTGGGTCCCACGGCCTGTGTCTGGCCTCCGTGATCTTGGCCAAGATGTaGATTTTCTCAGGACTTTGG +
Preference number: 5 (lower is better)
Translates to: LSPLGWEPGSHGLCLASVILAKM*IFSGLW
Trigger: CCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGAT...CACGGAGGCCAGACACAGGCCGTGGGACCCAGGCTCCCAGCCTAAGGGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GGCCGCCATGGCTCAGGGCTGGTGAACTTCTTAGCCCCAAACCCCCATGGCTCAGCCACAAAGAGCAGGTaGATCTTGGCCAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: GRHGSGLVNFLAPNPHGSATKSR*ILAKML
Trigger: CAACATCTTGGCCAAGATCAACCTGCTCTTTGTGGC...TGAGCCATGGGGGTTTGGGGCTAAGAAGTTCACCAGCCCTGAGCCATGGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGACGCAGGGCAGCCAGCTaGACAATACACTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGRRAAS*TIHSPV
Trigger: CACAGGCGAGTGTATTGTCAAGCTGGCTGCCCTGCG...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATCAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNQNSAW*IRGAEA
Trigger: GGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTG...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTCTCAGGCTTCGCCAGTaGACCCTGTTACCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: KLLRVWSREPWEIASFLSLRLRQ*TLLPQG
Trigger: ACCCTGAGGTAACAGGGTCAACTGGCGAAGCCTGAG...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGGACAACATCTGGCACTaGATGTCTGTCCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLDNIWH*MSVLPS
Trigger: GGAGGGAAGGACAGACATCAAGTGCCAGATGTTGTC...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCGCCTCGTGTTCTTTCTaGAGCATTTCCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EVAFQSRRALPDQTRSQVASCSF*SISMAS
Trigger: GGAGGCCATGGAAATGCTCAAGAAAGAACACGAGGC...GACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCAACTTCACTCCCTGCTaGATGGACATCCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSINFTPC*MDIHSG
Trigger: CCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGTT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAACTTCACTCCCTGCTaGATGGACATCCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGNFTPC*MDIHSG
Trigger: CCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGTT...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGGCTGGGCCTGACCACAGTGCCCCCTCTCTCAAAGGTGCCATGGTTCATTCCCTCGAGGGCAATGATCTaGAAGGTCATCTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: RLGLTTVPPLSKVPWFIPSRAMI*KVISAV
Trigger: CACAGCAGAGATGACCTTCAAGATCATTGCCCTCGA...GGGAATGAACCATGGCACCTTTGAGAGAGGGGGCACTGTGGTCAGGCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGTCGAGGGCAATGATCTaGAAGGTCATCTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTSRAMI*KVISAV
Trigger: CACAGCAGAGATGACCTTCAAGATCATTGCCCTCGA...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGGTGCCCTGGCCTGGTaGCTCGCCTTCCTCAAACCG +
Preference number: 5 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRGALAW*LAFLKP
Trigger: CGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCACC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACTACTCAAGCAGAACCTaGATGGTCTTCCGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHYSSRT*MVFRSS
Trigger: AGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGTA...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCACATATGTGAACATCTaGTCGGCATACTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRTYVNI*SAYSSR
Trigger: TCTGCTTGAGTATGCCGACAAGATGTTCACATATGT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATGCAAAGCCCAGGGTGTaGGCCACCAGGCTGACCAGA +
Preference number: 5 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNAKPRV*ATRLTR
Trigger: TCTGGTCAGCCTGGTGGCCAACACCCTGGGCTTTGC...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTACCCGGCCCCCACGTaGTCAAAGTTGACTTTCACC +
Preference number: 5 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRYPAPT*SKLTFT
Trigger: GGTGAAAGTCAACTTTGACAACGTGGGGGCCGGGTA...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGAGCCCTGGGAGATCGCCAGTTTCCTCTCTTCAGGCAGGCTGAGGGGCCGCCAGATTTTCTCAGGACTTaGGTCATCTGTCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: RALGDRQFPLFRQAEGPPDFLRT*VICLHH
Trigger: ATGGTGGAGACAGATGACCAAAGTCCTGAGAAAATC...TGGCGGCCCCTCAGCCTGCCTGAAGAGAGGAAACTGGCGATCTCCCAGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTATCTTGGCCAAGATGTaGATTTTCTCAGGACTTTGG +
Preference number: 5 (lower is better)
Translates to: AQANCSGCPRGATELCLVILAKM*IFSGLW
Trigger: CCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGAT...AACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCAACTGCTCCGGCTGTCCACGCGGCGCCACAGAACTCTGCCTGGTTGATCCGCATCTTGGCCAAGATGTaGATTTTCTCAGGACTTTGG +
Preference number: 5 (lower is better)
Translates to: PTAPAVHAAPQNSAWLIRILAKM*IFSGLW
Trigger: CCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGAT...GCGGATCAACCAGGCAGAGTTCTGTGGCGCCGCGTGGACAGCCGGAGCAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGTCTAAGAGCAGGTTGATCTaGGCCAAGATGTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: PAQGAGPSSAPHSHVSVSKSRLI*AKMLIF
Trigger: GAAAATCAACATCTTGGCCAAGATCAACCTGCTCTT...AGACACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGCCACAAAGAGCAGGTaGATCTTGGCCAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRATKSR*ILAKML
Trigger: CAACATCTTGGCCAAGATCAACCTGCTCTTTGTGGC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GGAGCTGGAGACCACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGATGGGCAGGTCCATGTaGATGAGGCTTATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GAGDHTENSSAYGPESPGMGRSM*MRLIWL
Trigger: CAACCAGATAAGCCTCATCAACATGGACCTGCCCAT...CCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGTGGTCTCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGATGGGCAGGTCCATGTaGATGAGGCTTATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRMGRSM*MRLIWL
Trigger: CAACCAGATAAGCCTCATCAACATGGACCTGCCCAT...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCATGCTTCAAAGAGCGTaGCAGCAGGTGCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIMLQRA*QQVPAE
Trigger: TTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCAT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATCAGAGCCGCAGGGCATaGCCTGACCAGACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNQSRRA*PDQTRS
Trigger: TGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTG...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGCCCTCCGACAGCTCGGCGAGGTAGGTTAGGAGCAGCCAGCCCAGAGCCGGCAGCACCCTTGTGTCCTTaGGTTTTGTTAATACTCTTA +
Preference number: 5 (lower is better)
Translates to: SPPTARRGRLGAASPEPAAPLCP*VLLILL
Trigger: TAAGAGTATTAACAAAACCAAAGGACACAAGGGTGC...TGCCGGCTCTGGGCTGGCTGCTCCTAACCTACCTCGCCGAGCTGTCGGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGTGGGCGGCTGCTGCTaGGCGCGGACTCGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLVGGCC*ARTRLG
Trigger: GCCGAGCCGAGTCCGCGCCAAGCAGCAGCCGCCCAC...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATAAGTTGCGCACGCACTaGTGCCTTAGGTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHKLRTH*CLRLPM
Trigger: CATGGGCAACCTAAGGCACAAGTGCGTGCGCAACTT...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGATTGAGCGCTGTGAAGTaGCGCACGCACTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGLSAVK*RTHLCL
Trigger: AAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAA...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGACTCAGCGATGGTGGCTaGGTTTTGCTCCTCATAGGC +
Preference number: 5 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGLSDGG*VLLLIG
Trigger: GCCTATGAGGAGCAAAACCAAGCCACCATCGCTGAG...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCGCCTCGTGTTCTTTCTaGAGCATTTCCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIASCSF*SISMAS
Trigger: GGAGGCCATGGAAATGCTCAAGAAAGAACACGAGGC...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCAGCATGGTGGACACTaGTGGCGAGACTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFQHGGH*WRDSSN
Trigger: GTTAGAGGAGTCTCGCCACAAGTGTCCACCATGCTG...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAAAGGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATAACTTCACTCCCTGCTaGATGGACATCCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: QRCHGSFPSKGTRTGPDHNFTPC*MDIHSG
Trigger: CCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGTT...ATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATCAGTCCTCTGGGTCCTaGACATCCTGGCCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNQSSGS*TSWPRS
Trigger: TGACCTCGGCCAGGATGTCAAGGACCCAGAGGACTG...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCATACTCAAGCAGAACCTaGATGGTCTTCCGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPYSSRT*MVFRSS
Trigger: AGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGTA...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCCCCACGTTGTCAAAGTaGACTTTCACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTPTLSK*TFTLVQ
Trigger: CTGGACCAAGGTGAAAGTCAACTTTGACAACGTGGG...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTACGTCAAAGGCCTGCTaGGTCACAATGTCGAATATG +
Preference number: 5 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCTSKAC*VTMSNM
Trigger: CATATTCGACATTGTGACCAAGCAGGCCTTTGACGT...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTATGCTTCAAAGAGCGTaGCAGCAGGTGCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFMLQRA*QQVPAE
Trigger: TTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCAT...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TTCCCTGCACAGGGCGCAGGGCCAAGCTCCGCTCCCCACTCCCATGTCTCTGTGGCACCCTTGTGTCCTTaGGTTTTGTTAATACTCTTA +
Preference number: 5 (lower is better)
Translates to: FPAQGAGPSSAPHSHVSVAPLCP*VLLILL
Trigger: TAAGAGTATTAACAAAACCAAAGGACACAAGGGTGC...CACAGAGACATGGGAGTGGGGAGCGGAGCTTGGCCCTGCGCCCTGTGCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGCGGCGCCACGCACCCTTGTGTCCTTaGGTTTTGTTAATACTCTTA +
Preference number: 5 (lower is better)
Translates to: YLRPPSTGQLLRLSTRRHAPLCP*VLLILL
Trigger: TAAGAGTATTAACAAAACCAAAGGACACAAGGGTGC...GTGGCGCCGCGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGGAGGTAATAGGAAGTTaGCCATCTTCTCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLREVIGS*PSSHPA
Trigger: AGCAGGATGAGAAGATGGCAAACTTCCTATTACCTC...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCATACGATGAAAGTCTTTaGGGTGCTATAGAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPYDESL*GAIEGV
Trigger: GACCCCTTCTATAGCACCCAAAAGACTTTCATCGTA...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTTACGATGAAAGTCTTTaGGGTGCTATAGAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCYDESL*GAIEGV
Trigger: GACCCCTTCTATAGCACCCAAAAGACTTTCATCGTA...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACGTCTCCTCGAATTCACTaGTCATGTTGTAGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: SQVYLRPPSTGQLLRLSTSPRIH*SCCSAP
Trigger: TGGAGCACTACAACATGACAAGTGAATTCGAGGAGA...CGTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGCACCGACAAGTaGCTCATGCGGGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSRSTDK*LMRDRP
Trigger: GGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGCG...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGGTGCCCTGGCCTGGTaGCTCGCCTTCCTCAAACCG +
Preference number: 5 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSGALAW*LAFLKP
Trigger: CGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCACC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGCCCACGTTGTCAAAGTaGACTTTCACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRPTLSK*TFTLVQ
Trigger: CTGGACCAAGGTGAAAGTCAACTTTGACAACGTGGG...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAGATTTTCTCAGGACTTaGGTCATCTGTCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: SRRALPDQTRSQVYLRPPDFLRT*VICLHH
Trigger: ATGGTGGAGACAGATGACCAAAGTCCTGAGAAAATC...TGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTGATTTTCTCAGGACTTaGGTCATCTGTCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCDFLRT*VICLHH
Trigger: ATGGTGGAGACAGATGACCAAAGTCCTGAGAAAATC...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCGCCACAAAGAGCAGGTaGATCTTGGCCAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSIATKSR*ILAKML
Trigger: CAACATCTTGGCCAAGATCAACCTGCTCTTTGTGGC...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCAGCTGGGATGAAGTaGCTTTCCAGAGCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRAAGMK*LSRAAG
Trigger: CCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTAAGAGACAGCGTGAATaGCTGCCCATGTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: KLLRVWSREPWEIASFLSKRQRE*LPMSME
Trigger: TTCCATGGACATGGGCAGCAATTCACGCTGTCTCTT...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GGTGCCATGGTTCATTCCCCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTATGGGGCTTGCACCCTaGTGTCCTTTGGTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: GAMVHSPLRARELGLTIPMGLAP*CPLVLL
Trigger: TAACAAAACCAAAGGACACAAGGGTGCAAGCCCCAT...AGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGGGGAATGAACCATGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTATGGGGCTTGCACCCTaGTGTCCTTTGGTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLMGLAP*CPLVLL
Trigger: TAACAAAACCAAAGGACACAAGGGTGCAAGCCCCAT...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAGACAACATCTGGCACTaGATGTCTGTCCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGDNIWH*MSVLPS
Trigger: GGAGGGAAGGACAGACATCAAGTGCCAGATGTTGTC...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS TCA 90 bp GGAGGAGGGTCAGAGGTTCTTCATTTCCAACCAGCTCCCAGGTCATaGCCATGCATTTGTCTTAGGACCAGCAGGGAATCAGCGCTACTC +
Preference number: 5 (lower is better)
Translates to: GGGSEVLHFQPAPRS*PCICLRTSRESALL
Trigger: GAGTAGCGCTGATTCCCTGCTGGTCCTAAGACAAATGCATGGTCATGACCTGGGAGCTGGTTGGAAATGAAGAACCTCTGACCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476683.1
CDS-3UTR CAA 90 bp CGACCCCTGGGCAGTGAAGACCTGTGGGAGCCACACTGGATTCCACTTCTGCTTGAGGTAATAGGAAGTTaGCCATCTTCTCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: RPLGSEDLWEPHWIPLLLEVIGS*PSSHPA
Trigger: AGCAGGATGAGAAGATGGCAAACTTCCTATTACCTC...AAGCAGAAGTGGAATCCAGTGTGGCTCCCACAGGTCTTCACTGCCCAGGGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCGAGCCGTTGGTGCCGTaGAGCGCTGTGAAGTTGCGC +
Preference number: 5 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSEPLVP*SAVKLR
Trigger: GCGCAACTTCACAGCGCTCAACGGCACCAACGGCTC...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCATCTCCTCGAATTCACTaGTCATGTTGTAGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPSPRIH*SCCSAP
Trigger: TGGAGCACTACAACATGACAAGTGAATTCGAGGAGA...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCTCTCCTCGAATTCACTaGTCATGTTGTAGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTSPRIH*SCCSAP
Trigger: TGGAGCACTACAACATGACAAGTGAATTCGAGGAGA...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGGTGCCCTGGCCTGGTaGCTCGCCTTCCTCAAACCG +
Preference number: 5 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRGALAW*LAFLKP
Trigger: CGGTTTGAGGAAGGCGAGCAACCAGGCCAGGGCACC...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GATCTTGCCCCAAAGAGGTCCTCTGTGTGGGTGCCATCAGGATCCCGGGCTGAGACATATGTGAACATCTaGTCGGCATACTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: DLAPKRSSVWVPSGSRAETYVNI*SAYSSR
Trigger: TCTGCTTGAGTATGCCGACAAGATGTTCACATATGT...CTCAGCCCGGGATCCTGATGGCACCCACACAGAGGACCTCTTTGGGGCAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CAGGAGCAAGGACAAGCTGCATGCCAGGCCGTGAATGGGGCTTGCACCCTTGTGACATATGTGAACATCTaGTCGGCATACTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: QEQGQAACQAVNGACTLVTYVNI*SAYSSR
Trigger: TCTGCTTGAGTATGCCGACAAGATGTTCACATATGT...CACAAGGGTGCAAGCCCCATTCACGGCCTGGCATGCAGCTTGTCCTTGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAGTTGACTTTCACCTaGGTCCAGTACAATTCTCCG +
Preference number: 5 (lower is better)
Translates to: SSWDEVAFQSRRALPDQTKLTFT*VQYNSP
Trigger: CGGAGAATTGTACTGGACCAAGGTGAAAGTCAACTT...GGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCACGTCAAAGGCCTGCTaGGTCACAATGTCGAATATG +
Preference number: 5 (lower is better)
Translates to: LLSRAAGHCLTRPGHRSITSKAC*VTMSNM
Trigger: CATATTCGACATTGTGACCAAGCAGGCCTTTGACGT...GATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCACGGCCTGTGTCTGGCCTCCGTGTGTGAGGACTGTGTGTGTGTGCTTGTGTATCTTGGCCAAGATGTaGATTTTCTCAGGACTTTGG +
Preference number: 5 (lower is better)
Translates to: PTACVWPPCVRTVCVCLCILAKM*IFSGLW
Trigger: CCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGAT...ACACAAGCACACACACACAGTCCTCACACACGGAGGCCAGACACAGGCCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACATCTTGGCCAAGATGTaGATTTTCTCAGGACTTTGG +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHILAKM*IFSGLW
Trigger: CCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGAT...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTCCACAAGAGCAGGTTGATCTaGGCCAAGATGTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: VTGLSEASKHRPTAPAVHKSRLI*AKMLIF
Trigger: GAAAATCAACATCTTGGCCAAGATCAACCTGCTCTT...GTGGACAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGAAGAGCAGGTTGATCTaGGCCAAGATGTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: QTRSQVYLRPPSTGQLLRKSRLI*AKMLIF
Trigger: GAAAATCAACATCTTGGCCAAGATCAACCTGCTCTT...CCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTGACACCTCTTCGTGCTaGCGCCGGAGTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCDTSSC*RRSVVV
Trigger: CACCACCACACTCCGGCGCAAGCACGAAGAGGTGTC...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAAAGAGACAGCGTGAATaGCTGCCCATGTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGKRQRE*LPMSME
Trigger: TTCCATGGACATGGGCAGCAATTCACGCTGTCTCTT...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCTCTCCTGCAAGGTGGTaGAGCCGCGGGCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSSPARW*SRGLAS
Trigger: AGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAGA...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CTCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGTACGATGAAAGTCTTTaGGGTGCTATAGAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: LLQEGKKRQLSVPRASPGYDESL*GAIEGV
Trigger: GACCCCTTCTATAGCACCCAAAAGACTTTCATCGTA...CCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGTTGAGCGCTGTGAAGTaGCGCACGCACTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRLSAVK*RTHLCL
Trigger: AAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAA...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGAGCCGTTGGTGCCGTaGAGCGCTGTGAAGTTGCGC +
Preference number: 5 (lower is better)
Translates to: TVSVLYFASAAGMKLLSREPLVP*SAVKLR
Trigger: GCGCAACTTCACAGCGCTCAACGGCACCAACGGCTC...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGCAGCATGGTGGACACTaGTGGCGAGACTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRQHGGH*WRDSSN
Trigger: GTTAGAGGAGTCTCGCCACAAGTGTCCACCATGCTG...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACACAGAAAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTTTCAGGACCACAAGGTaGCCAATGACCATAACAAGC +
Preference number: 5 (lower is better)
Translates to: TQKTPPRMVQRALGDRQFFRTTR*PMTITS
Trigger: GCTTGTTATGGTCATTGGCAACCTTGTGGTCCTGAA...AAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTTTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGACATATGTGAACATCTaGTCGGCATACTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: SWDEVAFQSRRALPDQTRTYVNI*SAYSSR
Trigger: TCTGCTTGAGTATGCCGACAAGATGTTCACATATGT...CCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAAGCGTCCGCAGTGACTaGATGGGGCCCATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRSVRSD*MGPISA
Trigger: TGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTAAGTTGACTTTCACCTaGGTCCAGTACAATTCTCCG +
Preference number: 5 (lower is better)
Translates to: KLLRVWSREPWEIASFLSKLTFT*VQYNSP
Trigger: CGGAGAATTGTACTGGACCAAGGTGAAAGTCAACTT...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAACGTCAAAGGCCTGCTaGGTCACAATGTCGAATATG +
Preference number: 5 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGTSKAC*VTMSNM
Trigger: CATATTCGACATTGTGACCAAGCAGGCCTTTGACGT...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AAACTCCTCCGCGTATGGTCCAGAGAGCCCTGGGAGATCGCCAGTTTCCTCTCTGATTTTCTCAGGACTTaGGTCATCTGTCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: KLLRVWSREPWEIASFLSDFLRT*VICLHH
Trigger: ATGGTGGAGACAGATGACCAAAGTCCTGAGAAAATC...AGAGAGGAAACTGGCGATCTCCCAGGGCTCTCTGGACCATACGCGGAGGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAAAGAGCAGGTTGATCTaGGCCAAGATGTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: AAGMKLLSRAAGHCLTRPKSRLI*AKMLIF
Trigger: GAAAATCAACATCTTGGCCAAGATCAACCTGCTCTT...TGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCAGAACTCTGCCTGGTaGATCCGCGGGGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDQNSAW*IRGAEA
Trigger: GGCCTCAGCCCCGCGGATCAACCAGGCAGAGTTCTG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCTCTAAGGGCACGAGAACTGGGCCTGACCATCCCTTTCCCTGCACAGGGCGCATTGTGTCCTTTGGTTTaGTTAATACTCTTACAGGAG +
Preference number: 5 (lower is better)
Translates to: PLRARELGLTIPFPAQGALCPLV*LILLQE
Trigger: CTCCTGTAAGAGTATTAACAAAACCAAAGGACACAA...TGCGCCCTGTGCAGGGAAAGGGATGGTCAGGCCCAGTTCTCGTGCCCTTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp CGCAGGGCATTGCCTGACCAGACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCGCACCCTTGTGTCCTTaGGTTTTGTTAATACTCTTA +
Preference number: 5 (lower is better)
Translates to: RRALPDQTRSQVYLRPPSAPLCP*VLLILL
Trigger: TAAGAGTATTAACAAAACCAAAGGACACAAGGGTGC...GCTTGGAGGCCTCAGATAGACCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS GCA 90 bp TTTCTTCTGGATTTCAACCCTCCTAACATAGGACTTCGGCTTGAGTaGCGTAAGGATGTCCACACAGCAAGCTTCCCGGTGGCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: FLLDFNPPNIGLRLE*RKDVHTASFPVALL
Trigger: CAAGAGAGCCACCGGGAAGCTTGCTGTGTGGACATCCTTACGGCACTCAAGCCGAAGTCCTATGTTAGGAGGGTTGAAATCCAGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS-3UTR CAA 90 bp GCCAGCCCTGGGACCCAGGCCACTCTCCTCTGGAAGCCTTTTATTTTTGTAGGAGAGGTAATAGGAAGTTaGCCATCTTCTCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: ASPGTQATLLWKPFIFVGEVIGS*PSSHPA
Trigger: AGCAGGATGAGAAGATGGCAAACTTCCTATTACCTC...TCCTACAAAAATAAAAGGCTTCCAGAGGAGAGTGGCCTGGGTCCCAGGGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCGCAGCACCGACAAGTaGCTCATGCGGGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLRSTDK*LMRDRP
Trigger: GGGCCTGTCCCGCATGAGCAACTTGTCGGTGCTGCG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp GAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTTCCCAGGTGGTCCGCTaGACAAAGCGCAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: ESPFTTYTVSVLYFASAASQVVR*TKRRPL
Trigger: GAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGA...AGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGTCCCAGGTGGTCCGCTaGACAAAGCGCAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLSQVVR*TKRRPL
Trigger: GAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGA...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ATGAAGTTGCTTTCCAGAGCCGCAGGGCATTGCCTGACCAGACCAGGTCACAGGACATATGTGAACATCTaGTCGGCATACTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: MKLLSRAAGHCLTRPGHRTYVNI*SAYSSR
Trigger: TCTGCTTGAGTATGCCGACAAGATGTTCACATATGT...CCTGTGACCTGGTCTGGTCAGGCAATGCCCTGCGGCTCTGGAAAGCAACTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGAGATTTTCTCAGGACTTaGGTCATCTGTCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGDFLRT*VICLHH
Trigger: ATGGTGGAGACAGATGACCAAAGTCCTGAGAAAATC...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp ACCAGGTCACAGGTCTATCTGAGGCCTCCAAGCACAGGCCAACTGCTCCGGCTGTTGTGTCCTTTGGTTTaGTTAATACTCTTACAGGAG +
Preference number: 5 (lower is better)
Translates to: TRSQVYLRPPSTGQLLRLLCPLV*LILLQE
Trigger: CTCCTGTAAGAGTATTAACAAAACCAAAGGACACAA...CAGCCGGAGCAGTTGGCCTGTGCTTGGAGGCCTCAGATAGACCTGTGACCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCAAGTTGCGCACGCACTaGTGCCTTAGGTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSKLRTH*CLRLPM
Trigger: CATGGGCAACCTAAGGCACAAGTGCGTGCGCAACTT...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCTCAGCGATGGTGGCTaGGTTTTGCTCCTCATAGGC +
Preference number: 5 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSLSDGG*VLLLIG
Trigger: GCCTATGAGGAGCAAAACCAAGCCACCATCGCTGAG...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCACAGTGCTGTTCTTTTaGCCATGGAGGGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSTVLFF*PWRAWP
Trigger: TGGCCACGCCCTCCATGGCAAAAAGAACAGCACTGT...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTCAGCATGGTGGACACTaGTGGCGAGACTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCQHGGH*WRDSSN
Trigger: GTTAGAGGAGTCTCGCCACAAGTGTCCACCATGCTG...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAAGGAGCTCAGCGGTGTaGGTCATGTCTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRRSSAV*VMSAVL
Trigger: CAGCACAGCAGACATGACCAACACCGCTGAGCTCCT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTGCAAAGCCCAGGGTGTaGGCCACCAGGCTGACCAGA +
Preference number: 5 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCAKPRV*ATRLTR
Trigger: TCTGGTCAGCCTGGTGGCCAACACCCTGGGCTTTGC...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGAGCGTCCGCAGTGACTaGATGGGGCCCATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLSVRSD*MGPISA
Trigger: TGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCGCAGGGCAGCCAGCTaGACAATACACTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDRRAAS*TIHSPV
Trigger: CACAGGCGAGTGTATTGTCAAGCTGGCTGCCCTGCG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
CDS-3UTR CAA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCATGGGCAGGTCCATGTaGATGAGGCTTATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCMGRSM*MRLIWL
Trigger: CAACCAGATAAGCCTCATCAACATGGACCTGCCCAT...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGACACCTCTTCGTGCTaGCGCCGGAGTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLDTSSC*RRSVVV
Trigger: CACCACCACACTCCGGCGCAAGCACGAAGAGGTGTC...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGATTCCACTTCTGCTTaGAGAACAGACTTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRDSTSA*RTDFRL
Trigger: CAGCCGGAAGTCTGTTCTCAAAGCAGAAGTGGAATC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTTCTCCTGCAAGGTGGTaGAGCCGCGGGCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCSPARW*SRGLAS
Trigger: AGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAGA...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGTCTCCTGCAAGGTGGTaGAGCCGCGGGCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLSPARW*SRGLAS
Trigger: AGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAGA...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTGATGTTCCAGCCCTGTaGGAAGTAGTAGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCDVPAL*EVVVGV
Trigger: GACCCCTACTACTACTTCCAACAGGGCTGGAACATC...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGTGGGATTCCTGCTGCTaGCTGGACTCCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLWDSCC*LDSSSV
Trigger: CACGGAGGAGGAGTCCAGCAAGCAGCAGGAATCCCA...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CAA 90 bp ACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAATGCTTCAAAGAGCGTaGCAGCAGGTGCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: TVSVLYFASAAGMKLLSRMLQRA*QQVPAE
Trigger: TTCCGCAGGCACCTGCTGCAACGCTCTTTGAAGCAT...TCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGGGCCGTGAATGGGGCTaGCACCCTTGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLGREWG*HPCVLW
Trigger: CCAAAGGACACAAGGGTGCAAGCCCCATTCACGGCC...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS CCA 90 bp AATCAGAAGAGGGTTTCTCAAACTTTCATGTGCCCAAGAATCCCCTaGGGATCAAATGAAAATGCAGGTGCTGACTTGGCAGGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: NQKRVSQTFMCPRIP*GSNENAGADLAGLE
Trigger: CTCCAGACCTGCCAAGTCAGCACCTGCATTTTCATTTGATCCCCAGGGGATTCTTGGGCACATGAAAGTTTGAGAAACCCTCTTCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476683.1
CDS-3UTR CAA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTCTCCTCGAATTCACTaGTCATGTTGTAGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCSPRIH*SCCSAP
Trigger: TGGAGCACTACAACATGACAAGTGAATTCGAGGAGA...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGAGGAGCTCAGCGGTGTaGGTCATGTCTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLRSSAV*VMSAVL
Trigger: CAGCACAGCAGACATGACCAACACCGCTGAGCTCCT...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTAGGAGCTCAGCGGTGTaGGTCATGTCTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCRSSAV*VMSAVL
Trigger: CAGCACAGCAGACATGACCAACACCGCTGAGCTCCT...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCTACTCAAGCAGAACCTaGATGGTCTTCCGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSYSSRT*MVFRSS
Trigger: AGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGTA...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGATGAAGCCCTGGTACTaGTTCAGGGGCCGTGGGATG +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLMKPWY*FRGRGM
Trigger: CATCCCACGGCCCCTGAACAAGTACCAGGGCTTCAT...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TCTTACAGGAGGGGAAGAAAAGGCAACTATCAGTGCCTAGGGCCAGCCCTGGGATTGTGTCCTTTGGTTTaGTTAATACTCTTACAGGAG +
Preference number: 5 (lower is better)
Translates to: SYRRGRKGNYQCLGPALGLCPLV*LILLQE
Trigger: CTCCTGTAAGAGTATTAACAAAACCAAAGGACACAA...TCCCAGGGCTGGCCCTAGGCACTGATAGTTGCCTTTTCTTCCCCTCCTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGAGCCGTTGGTGCCGTaGAGCGCTGTGAAGTTGCGC +
Preference number: 5 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQEPLVP*SAVKLR
Trigger: GCGCAACTTCACAGCGCTCAACGGCACCAACGGCTC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAACAGTGCTGTTCTTTTaGCCATGGAGGGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKTVLFF*PWRAWP
Trigger: TGGCCACGCCCTCCATGGCAAAAAGAACAGCACTGT...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CGGCTGCTCCATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCACATATGTGAACATCTaGTCGGCATACTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: RLLHRHSCSGLRRDSVNCTYVNI*SAYSSR
Trigger: TCTGCTTGAGTATGCCGACAAGATGTTCACATATGT...GCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATGGAGCAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TACAAAAATAGGATTTCCACTTGGAGAAATGTCGCTGGGACAGTTAAACCGTGTTACCCGGCCCCCACGTaGTCAAAGTTGACTTTCACC +
Preference number: 5 (lower is better)
Translates to: YKNRISTWRNVAGTVKPCYPAPT*SKLTFT
Trigger: GGTGAAAGTCAACTTTGACAACGTGGGGGCCGGGTA...ACACGGTTTAACTGTCCCAGCGACATTTCTCCAAGTGGAAATCCTATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGATCTTGGCCAAGATGTaGATTTTCTCAGGACTTTGG +
Preference number: 5 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRILAKM*IFSGLW
Trigger: CCAAAGTCCTGAGAAAATCAACATCTTGGCCAAGAT...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCAAGTTGACTTTCACCTaGGTCCAGTACAATTCTCCG +
Preference number: 5 (lower is better)
Translates to: SLSFIFRLSSWDEVAFQSKLTFT*VQYNSP
Trigger: CGGAGAATTGTACTGGACCAAGGTGAAAGTCAACTT...GCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCCCACGTTGTCAAAGTaGACTTTCACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDPTLSK*TFTLVQ
Trigger: CTGGACCAAGGTGAAAGTCAACTTTGACAACGTGGG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGGCACCCTTGTGTCCTTaGGTTTTGTTAATACTCTTA +
Preference number: 5 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRAPLCP*VLLILL
Trigger: TAAGAGTATTAACAAAACCAAAGGACACAAGGGTGC...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp GGTTGGGTCTGGGGTTGCCACCAAGGGAACTGGGGTGACAAGAAGAAACATAATCGAAGAGCCGACAAATaGCCTAGTTTTATATTTTCT +
Preference number: 5 (lower is better)
Translates to: GWVWGCHQGNWGDKKKHNRRADK*PSFIFS
Trigger: AGAAAATATAAAACTAGGCAATTTGTCGGCTCTTCG...ATTATGTTTCTTCTTGTCACCCCAGTTCCCTTGGTGGCAACCCCAGACCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000413689.6
ENST00000414099.6
CDS-3UTR CAA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAATCGAGGGCAATGATCTaGAAGGTCATCTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKSRAMI*KVISAV
Trigger: CACAGCAGAGATGACCTTCAAGATCATTGCCCTCGA...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGTACTCAAGCAGAACCTaGATGGTCTTCCGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLYSSRT*MVFRSS
Trigger: AGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGTA...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGCCCACGTTGTCAAAGTaGACTTTCACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLPTLSK*TFTLVQ
Trigger: CTGGACCAAGGTGAAAGTCAACTTTGACAACGTGGG...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATACGTCAAAGGCCTGCTaGGTCACAATGTCGAATATG +
Preference number: 5 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDTSKAC*VTMSNM
Trigger: CATATTCGACATTGTGACCAAGCAGGCCTTTGACGT...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTAAGAGCAGGTTGATCTaGGCCAAGATGTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCKSRLI*AKMLIF
Trigger: GAAAATCAACATCTTGGCCAAGATCAACCTGCTCTT...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGCCACAAAGAGCAGGTaGATCTTGGCCAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLATKSR*ILAKML
Trigger: CAACATCTTGGCCAAGATCAACCTGCTCTTTGTGGC...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGATGGGCAGGTCCATGTaGATGAGGCTTATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLMGRSM*MRLIWL
Trigger: CAACCAGATAAGCCTCATCAACATGGACCTGCCCAT...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CGTGAATTGCTGCCCATGTCCATGGAAAAATCCTTAGTTCTTTGCTCAAGTAAAAAGAGACAGCGTGAATaGCTGCCCATGTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: RELLPMSMEKSLVLCSSKKRQRE*LPMSME
Trigger: TTCCATGGACATGGGCAGCAATTCACGCTGTCTCTT...TTTACTTGAGCAAAGAACTAAGGATTTTTCCATGGACATGGGCAGCAATTCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCTCAGGCTTCGCCAGTaGACCCTGTTACCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQLRLRQ*TLLPQG
Trigger: ACCCTGAGGTAACAGGGTCAACTGGCGAAGCCTGAG...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
CDS-3UTR CAA 90 bp AGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGCTTTCCAGAGCCGCAGGCGAAGAGCCGACAAATaGCCTAGTTTTATATTTTCT +
Preference number: 5 (lower is better)
Translates to: SFIFRLSSWDEVAFQSRRRRADK*PSFIFS
Trigger: AGAAAATATAAAACTAGGCAATTTGTCGGCTCTTCG...CCTGCGGCTCTGGAAAGCAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413689.6
ENST00000414099.6
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAGGTAATAGGAAGTTaGCCATCTTCTCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDEVIGS*PSSHPA
Trigger: AGCAGGATGAGAAGATGGCAAACTTCCTATTACCTC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCATGGTGGACACTaGTGGCGAGACTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQQHGGH*WRDSSN
Trigger: GTTAGAGGAGTCTCGCCACAAGTGTCCACCATGCTG...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp ACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGAAGTTGTTCAGGACCACAAGGTaGCCAATGACCATAACAAGC +
Preference number: 5 (lower is better)
Translates to: TTYTVSVLYFASAAGMKLFRTTR*PMTITS
Trigger: GCTTGTTATGGTCATTGGCAACCTTGTGGTCCTGAA...CAACTTCATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATGATTTTCTCAGGACTTaGGTCATCTGTCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDDFLRT*VICLHH
Trigger: ATGGTGGAGACAGATGACCAAAGTCCTGAGAAAATC...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGTACGATGAAAGTCTTTaGGGTGCTATAGAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLYDESL*GAIEGV
Trigger: GACCCCTTCTATAGCACCCAAAAGACTTTCATCGTA...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp AAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGTCTCCTCGAATTCACTaGTCATGTTGTAGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: KAHSQHIQSQFYISPQQLSPRIH*SCCSAP
Trigger: TGGAGCACTACAACATGACAAGTGAATTCGAGGAGA...CAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGGATGTTCCAGCCCTGTaGGAAGTAGTAGTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQDVPAL*EVVVGV
Trigger: GACCCCTACTACTACTTCCAACAGGGCTGGAACATC...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp CATAGACACTCTTGTTCAGGGTTAAGAAGAGACAGCGTGAATTGCTGCCCATGTCGAAGAGCCGACAAATaGCCTAGTTTTATATTTTCT +
Preference number: 5 (lower is better)
Translates to: HRHSCSGLRRDSVNCCPCRRADK*PSFIFS
Trigger: AGAAAATATAAAACTAGGCAATTTGTCGGCTCTTCG...ACATGGGCAGCAATTCACGCTGTCTCTTCTTAACCCTGAACAAGAGTGTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413689.6
ENST00000414099.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGAAGAGACAGCGTGAATaGCTGCCCATGTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQKRQRE*LPMSME
Trigger: TTCCATGGACATGGGCAGCAATTCACGCTGTCTCTT...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS-3UTR CAA 90 bp CCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGCAGCTGGGATCGAAGAGCCGACAAATaGCCTAGTTTTATATTTTCT +
Preference number: 5 (lower is better)
Translates to: PIHNIYSLSFIFRLSSWDRRADK*PSFIFS
Trigger: AGAAAATATAAAACTAGGCAATTTGTCGGCTCTTCG...ATCCCAGCTGCTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413689.6
ENST00000414099.6
ENST00000450102.6
ENST00000455624.6
CDS-3UTR CAA 90 bp TTTATGAAAGCCCATTCACAACATATACAGTCTCAGTTTTATATTTCGCCTCAGTTGTGTCCTTTGGTTTaGTTAATACTCTTACAGGAG +
Preference number: 5 (lower is better)
Translates to: FMKAHSQHIQSQFYISPQLCPLV*LILLQE
Trigger: CTCCTGTAAGAGTATTAACAAAACCAAAGGACACAA...CTGAGGCGAAATATAAAACTGAGACTGTATATGTTGTGAATGGGCTTTCATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS GCA 72 bp TGGGCGCAGGCTCAGCGGCCCCGGGGGAGCGATCCCTaGATCCTACGGGCGCCGCCGCCGTCTCGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: WAQAQRPRGSDP*ILRAPPPSRLR
Trigger: GCGGAGCCGAGACGGCGGCGGCGCCCGTAGGATGCAGGGATCGCTCCCCCGGGGCCGCTGAGCCTGCGCCCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
CDS CCA 72 bp TGGCCAGGAGCCGAGGTTCCGGGACTGGGCTGTCCCTaGGCACTGGTCCGGCGCAGGGGCCAGGGCACCAGC +
Preference number: 6 (lower is better)
Translates to: WPGAEVPGLGCP*ALVRRRGQGTS
Trigger: GCTGGTGCCCTGGCCCCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGGCTCCTGGCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp CATGGAGGGCGTGGCCAGGAGCCGAGGTTCCGGGACTaGGCTGTCCCTGGGCACTGGTCCGGCGCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: HGGRGQEPRFRD*AVPGHWSGAGA
Trigger: GGCCCCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGGCTCCTGGCCACGCCCTCCATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp GAGCCGAGGTTCCGGGACTGGGCTGTCCCTGGGCACTaGTCCGGCGCAGGGGCCAGGGCACCAGCAGTGATG +
Preference number: 6 (lower is better)
Translates to: EPRFRDWAVPGH*SGAGARAPAVM
Trigger: CATCACTGCTGGTGCCCTGGCCCCTGCGCCGGACCAGTGCCCAGGGACAGCCCAGTCCCGGAACCTCGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS GCA 72 bp AATGCAGCTGGGCAGCTGGCCCTGGGCGGCAAGGGCTaGGGGCTTCTGAGGCCGCTGCCGCAGGAGACCACA +
Preference number: 6 (lower is better)
Translates to: NAAGQLALGGKG*GLLRPLPQETT
Trigger: TGTGGTCTCCTGCGGCAGCGGCCTCAGAAGCCCGCAGCCCTTGCCGCCCAGGGCCAGCTGCCCAGCTGCATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 90 bp GGCCGCTGCCGCAGGAGACCACAGCAGAAATCCCAGGTGGTCCGCTaGACAAAGCGCAGGCCCCTCTGGATGCGGGCCAGGGCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: GRCRRRPQQKSQVVR*TKRRPLWMRARASW
Trigger: CCAGCTGGCCCTGGCCCGCATCCAGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGATTTCTGCTGTGGTCTCCTGCGGCAGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp TGCGCAACCGCCACCAGACCTTCCCTGGGGCCTGTGTaGTGTCCACCGCACAGCAGGGACAGCGCCGGACAC +
Preference number: 6 (lower is better)
Translates to: CATATRPSLGPV*CPPHSRDSAGH
Trigger: GTGTCCGGCGCTGTCCCTGCTGTGCGGTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGGCGGTTGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS GCA 72 bp GGTGAGGACGCTGACTGCGCTGAGGGCCCGCTGCCGTaGTCCTGGCTCCTCGAAGCCATCTACACACGGAGC +
Preference number: 6 (lower is better)
Translates to: GEDADCAEGPLP*SWLLEAIYTRS
Trigger: GCTCCGTGTGTAGATGGCTTCGAGGAGCCAGGAGCACGGCAGCGGGCCCTCAGCGCAGTCAGCGTCCTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp TCTGGCGGGTGCTCTAGCATCACAGGGCGGAGGAGGTaGCTTCCTGGGGATGTGGCCTCTGGGTCGCCTGCC +
Preference number: 6 (lower is better)
Translates to: SGGCSSITGRRR*LPGDVASGSPA
Trigger: GGCAGGCGACCCAGAGGCCACATCCCCAGGAAGCCACCTCCTCCGCCCTGTGATGCTAGAGCACCCGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 72 bp AGATGCACTGGCCTCGGCCTCAGAGGAGGCAGTCGCTaGCACCTGGCTCCAGGTCCTGGAATCCGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: RCTGLGLRGGSR*HLAPGPGIRRG
Trigger: GCCCCTCCGGATTCCAGGACCTGGAGCCAGGTGTCAGCGACTGCCTCCTCTGAGGCCGAGGCCAGTGCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS TCA 72 bp TGGGGTTCCGCTTTCCACTGCTGCCGCCAGTCGGCCTaGGATGCACTGGCCTCGGCCTCAGAGGAGGCAGTC +
Preference number: 6 (lower is better)
Translates to: WGSAFHCCRQSA*DALASASEEAV
Trigger: GACTGCCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCGACTGGCGGCAGCAGTGGAAAGCGGAACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS GCA 72 bp CCTGGCTCCTCCGATGGCGTGGTCGTGTCTGGCGGGTaGTCTAGCATCACAGGGCGGAGGAGGTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: PGSSDGVVVSGG*SSITGRRRWLP
Trigger: AGGAAGCCACCTCCTCCGCCCTGTGATGCTAGAGCACCCGCCAGACACGACCACGCCATCGGAGGAGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp AAGCCATCTACACACGGAGCCTGGGAGGTCAGCATCTaGGGCCCGCCTGGCTCCTCCGATGGCGTGGTCGTG +
Preference number: 6 (lower is better)
Translates to: KPSTHGAWEVSI*GPPGSSDGVVV
Trigger: CACGACCACGCCATCGGAGGAGCCAGGCGGGCCCCAGATGCTGACCTCCCAGGCTCCGTGTGTAGATGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 72 bp TTCTCATCCTGCTTCTGGGCACAGGCTCTCCTCACGTaGCCTGTGGGGAAGCTGCTGGTCCCCCGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: FSSCFWAQALLT*PVGKLLVPRPG
Trigger: GCCCGGCCGGGGGACCAGCAGCTTCCCCACAGGCAACGTGAGGAGAGCCTGTGCCCAGAAGCAGGATGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000423572.7
ENST00000491944.1
CDS TCA 72 bp GCAGGAGACCACAGCAGAAATCCCAGGTGGTCCGCTTaGCAAAGCGCAGGCCCCTCTGGATGCGGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: AGDHSRNPRWSA*QSAGPSGCGPG
Trigger: CCCTGGCCCGCATCCAGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGATTTCTGCTGTGGTCTCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp GTTGCTCGCCTTCCTCAAACCGTGTTTCCTTGCGGGTaGGAGGCACCTTCTCCGTCTCTGGGGGTGGCGGGG +
Preference number: 6 (lower is better)
Translates to: VARLPQTVFPCG*EAPSPSLGVAG
Trigger: CCCCGCCACCCCCAGAGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGAGGAAGGCGAGCAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp CTTTCCACTGCTGCCGCCAGTCGGCCTGAGATGCACTaGCCTCGGCCTCAGAGGAGGCAGTCGCTGACACCT +
Preference number: 6 (lower is better)
Translates to: LSTAAASRPEMH*PRPQRRQSLTP
Trigger: AGGTGTCAGCGACTGCCTCCTCTGAGGCCGAGGCCAGTGCATCTCAGGCCGACTGGCGGCAGCAGTGGAAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS CCA 72 bp GTAGCAGGTCTTGCGCAACCGCCACCAGACCTTCCCTaGGGCCTGTGTGGTGTCCACCGCACAGCAGGGACA +
Preference number: 6 (lower is better)
Translates to: VAGLAQPPPDLP*GLCGVHRTAGT
Trigger: TGTCCCTGCTGTGCGGTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGGCGGTTGCGCAAGACCTGCTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 72 bp GATTCCCAGACCAAGCCGTCGGCCTCCACGGAGCCGTaGGTGCCGTTGAGCGCTGTGAAGTTGCGCACGCAC +
Preference number: 6 (lower is better)
Translates to: DSQTKPSASTEP*VPLSAVKLRTH
Trigger: GTGCGTGCGCAACTTCACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGCCGACGGCTTGGTCTGGGAATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 72 bp CGCAGGAGACCACAGCAGAAATCCCAGGTGGTCCGCTaGACAAAGCGCAGGCCCCTCTGGATGCGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RRRPQQKSQVVR*TKRRPLWMRAR
Trigger: CCTGGCCCGCATCCAGAGGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGATTTCTGCTGTGGTCTCCTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 72 bp TCAGAGGACGGAGTGCACGCAGCGTCCGCAGTGACTTaGTGGGGCCCATCTCGGCAAAGCCCAGGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: SEDGVHAASAVT*WGPSRQSPGCW
Trigger: CCAACACCCTGGGCTTTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCTGCGTGCACTCCGTCCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 72 bp AGCTCTCAGAGGACGGAGTGCACGCAGCGTCCGCAGTaGCTTGATGGGGCCCATCTCGGCAAAGCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: SSQRTECTQRPQ*LDGAHLGKAQG
Trigger: ACCCTGGGCTTTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCTGCGTGCACTCCGTCCTCTGAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS GCA 72 bp GCGGGCTTGCTTCTCTGCCATGCGCTTCTCGATGGCTaGCAGGGACTCCCGTGTGAACCTGCGGAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: AGLLLCHALLDG*QGLPCEPAEAA
Trigger: AGCAGCTTCCGCAGGTTCACACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGGCAGAGAAGCAAGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000327956.6
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
ENST00000491944.1
CDS GCA 72 bp TCTCGGCTCTCCTGCAAGGTGGTTGAGCCGCGGGCTTaGTTCTCTGCCATGCGCTTCTCGATGGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SRLSCKVVEPRA*FSAMRFSMAAR
Trigger: CCTGGCAGCCATCGAGAAGCGCATGGCAGAGAAGCAAGCCCGCGGCTCAACCACCTTGCAGGAGAGCCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000327956.6
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
ENST00000491944.1
CDS GCA 72 bp GGCCTGGTTGCTCGCCTTCCTCAAACCGTGTTTCCTTaGGGGTGGGAGGCACCTTCTCCGTCTCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: GLVARLPQTVFP*GWEAPSPSLGV
Trigger: CACCCCCAGAGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGAGGAAGGCGAGCAACCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp CAGTCCACAGTGCTGTTCTTTTTGCCATGGAGGGCGTaGCCAGGAGCCGAGGTTCCGGGACTGGGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: QSTVLFFLPWRA*PGAEVPGLGCP
Trigger: GGGACAGCCCAGTCCCGGAACCTCGGCTCCTGGCCACGCCCTCCATGGCAAAAAGAACAGCACTGTGGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp CTCACTGAGGGAAAGGCCTTCCCCCAGGCTCCTGCATaGCGATGTGCTGCACGGACACGCATGCCCACAGTG +
Preference number: 6 (lower is better)
Translates to: LTEGKAFPQAPA*RCAARTRMPTV
Trigger: CACTGTGGGCATGCGTGTCCGTGCAGCACATCGCCATGCAGGAGCCTGGGGGAAGGCCTTTCCCTCAGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327956.6
CDS CAA 72 bp ACCAAGCCGTCGGCCTCCACGGAGCCGTTGGTGCCGTaGAGCGCTGTGAAGTTGCGCACGCACTTGTGCCTT +
Preference number: 6 (lower is better)
Translates to: TKPSASTEPLVP*SAVKLRTHLCL
Trigger: AAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGCCGACGGCTTGGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 72 bp CTCAGAGGACGGAGTGCACGCAGCGTCCGCAGTGACTaGATGGGGCCCATCTCGGCAAAGCCCAGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: LRGRSARSVRSD*MGPISAKPRVL
Trigger: CAACACCCTGGGCTTTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCTGCGTGCACTCCGTCCTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 90 bp GATTCCCAGACCAAGCCGTCGGCCTCCACGGAGCCGTTGGTGCCGTaGAGCGCTGTGAAGTTGCGCACGCACTTGTGCCTTAGGTTGCCC +
Preference number: 6 (lower is better)
Translates to: DSQTKPSASTEPLVP*SAVKLRTHLCLRLP
Trigger: GGGCAACCTAAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGCCGACGGCTTGGTCTGGGAATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 90 bp AGGTCCAGGGATTCCCAGACCAAGCCGTCGGCCTCCACGGAGCCGTaGGTGCCGTTGAGCGCTGTGAAGTTGCGCACGCACTTGTGCCTT +
Preference number: 6 (lower is better)
Translates to: RSRDSQTKPSASTEP*VPLSAVKLRTHLCL
Trigger: AAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAACGGCACCAACGGCTCCGTGGAGGCCGACGGCTTGGTCTGGGAATCCCTGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 90 bp ACATCCTGGCCGAGGTCAGGGATCTGCTCCAGGAGCTCAGCGGTGTaGGTCATGTCTGCTGTGCTGCCCTCGGAGCAACTGTCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: TSWPRSGICSRSSAV*VMSAVLPSEQLSSG
Trigger: CCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGGCCAGGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 72 bp CCATGCGCTTCTCGATGGCTGCCAGGGACTCCCGTGTaGACCTGCGGAAGCTGCTGGTGCCCCGAGGTAATA +
Preference number: 6 (lower is better)
Translates to: PCASRWLPGTPV*TCGSCWCPEVI
Trigger: TATTACCTCGGGGCACCAGCAGCTTCCGCAGGTTCACACGGGAGTCCCTGGCAGCCATCGAGAAGCGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327956.6
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
ENST00000491944.1
CDS GCA 72 bp GCTCCAGGAGCTCAGCGGTGTTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGTCCTCTGGGGTCTCAC +
Preference number: 6 (lower is better)
Translates to: APGAQRCWSCLL*CPRSNCPLGSH
Trigger: GTGAGACCCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000455624.6
CDS GCA 72 bp GCTCCAGGAGCTCAGCGGTGTTGGTCATGTCTGCTGTaGTGCCCTCGGAGCAACTGTCCTCTGGGGTCTGCT +
Preference number: 6 (lower is better)
Translates to: APGAQRCWSCLL*CPRSNCPLGSA
Trigger: AGCAGACCCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449557.6
ENST00000450102.6
CDS CAA 72 bp TGGCCTGGTTGCTCGCCTTCCTCAAACCGTGTTTCCTaGCGGGTGGGAGGCACCTTCTCCGTCTCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: WPGCSPSSNRVS*RVGGTFSVSGG
Trigger: ACCCCCAGAGACGGAGAAGGTGCCTCCCACCCGCAAGGAAACACGGTTTGAGGAAGGCGAGCAACCAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 90 bp GTCCGCAGTGACTTGATGGGGCCCATCTCGGCAAAGCCCAGGGTGTaGGCCACCAGGCTGACCAGAGAGACGTCTACGATGAGGAAGTCG +
Preference number: 6 (lower is better)
Translates to: VRSDLMGPISAKPRV*ATRLTRETSTMRKS
Trigger: CGACTTCCTCATCGTAGACGTCTCTCTGGTCAGCCTGGTGGCCAACACCCTGGGCTTTGCCGAGATGGGCCCCATCAAGTCACTGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 72 bp GGGGTCGGGAGAAGTTCTCACTCATCACGTAGGCGATaGGGCCCTCTCGCTCAGGGGCATCCTCTTCGGAGA +
Preference number: 6 (lower is better)
Translates to: GVGRSSHSSRRR*GPLAQGHPLRR
Trigger: TCTCCGAAGAGGATGCCCCTGAGCGAGAGGGCCTCATCGCCTACGTGATGAGTGAGAACTTCTCCCGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS GCA 72 bp GATCTGCTCCAGGAGCTCAGCGGTGTTGGTCATGTCTaGTGTGCTGCCCTCGGAGCAACTGTCCTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: DLLQELSGVGHV*CAALGATVLWG
Trigger: ACCCCAGAGGACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS GCA 72 bp CCTTGGCTAAGTTCTGGTGACCTGCTTGAAGGTCCCTaGAAGTGGGTGGGGAGGAGGACGGACCAAGGGGGT +
Preference number: 6 (lower is better)
Translates to: PWLSSGDLLEGP*KWVGRRTDQGG
Trigger: ACCCCCTTGGTCCGTCCTCCTCCCCACCCACTTGCAGGGACCTTCAAGCAGGTCACCAGAACTTAGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476683.1
CDS CCA 72 bp CGCTGGGCGAGACGGTTCCAGCATGGTGGACACTTGTaGCGAGACTCCTCTAACTCTTCCAGTGCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: RWARRFQHGGHL*RDSSNSSSALV
Trigger: CACCAGCGCACTGGAAGAGTTAGAGGAGTCTCGCCACAAGTGTCCACCATGCTGGAACCGTCTCGCCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp CGAGGTCAGGGATCTGCTCCAGGAGCTCAGCGGTGTTaGTCATGTCTGCTGTGCTGCCCTCGGAGCAACTGT +
Preference number: 6 (lower is better)
Translates to: RGQGSAPGAQRC*SCLLCCPRSNC
Trigger: ACAGTTGCTCCGAGGGCAGCACAGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp CCTTCAGTGAAGCAGTCCTCTGGGTCCTTGACATCCTaGCCGAGGTCAGGGATCTGCTCCAGGAGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: PSVKQSSGSLTS*PRSGICSRSSA
Trigger: CGCTGAGCTCCTGGAGCAGATCCCTGACCTCGGCCAGGATGTCAAGGACCCAGAGGACTGCTTCACTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp ACAGCGCCGGACACAGCCTTCAGTGAAGCAGTCCTCTaGGTCCTTGACATCCTGGCCGAGGTCAGGGATCTG +
Preference number: 6 (lower is better)
Translates to: TAPDTAFSEAVL*VLDILAEVRDL
Trigger: CAGATCCCTGACCTCGGCCAGGATGTCAAGGACCCAGAGGACTGCTTCACTGAAGGCTGTGTCCGGCGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 72 bp GACTTGATGGGGCCCATCTCGGCAAAGCCCAGGGTGTaGGCCACCAGGCTGACCAGAGAGACGTCTACGATG +
Preference number: 6 (lower is better)
Translates to: DLMGPISAKPRV*ATRLTRETSTM
Trigger: CATCGTAGACGTCTCTCTGGTCAGCCTGGTGGCCAACACCCTGGGCTTTGCCGAGATGGGCCCCATCAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 72 bp ACCACTCTGCCACTCTCGCCACACCACTGGGACCCATaGCATGAAACCACATGTGGAGTCTGGGGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: TTLPLSPHHWDP*HETTCGVWGWG
Trigger: TCCCCAGCCCCAGACTCCACATGTGGTTTCATGTCATGGGTCCCAGTGGTGTGGCGAGAGTGGCAGAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS GCA 72 bp TCTGGGTCCTTGACATCCTGGCCGAGGTCAGGGATCTaGTCCAGGAGCTCAGCGGTGTTGGTCATGTCTGCT +
Preference number: 6 (lower is better)
Translates to: SGSLTSWPRSGI*SRSSAVLVMSA
Trigger: AGCAGACATGACCAACACCGCTGAGCTCCTGGAGCAGATCCCTGACCTCGGCCAGGATGTCAAGGACCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp AAAGAGCGTTGCAGCAGGTGCCTGCGGAAGGCTCTCTaGATAACCATGGCCGACACCTCTTCGTGCTTGCGC +
Preference number: 6 (lower is better)
Translates to: KERCSRCLRKAL*ITMADTSSCLR
Trigger: GCGCAAGCACGAAGAGGTGTCGGCCATGGTTATCCAGAGAGCCTTCCGCAGGCACCTGCTGCAACGCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp ATCAGCGCTACTCTCACTCCTAAACTAGAATGGAGGTaGGGTGGGGGCAGCACGTGCACATCCCCAGCGTGG +
Preference number: 6 (lower is better)
Translates to: ISATLTPKLEWR*GGGSTCTSPAW
Trigger: CCACGCTGGGGATGTGCACGTGCTGCCCCCACCCCACCTCCATTCTAGTTTAGGAGTGAGAGTAGCGCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476683.1
CDS CAA 72 bp TCCACGGAGCCGTTGGTGCCGTTGAGCGCTGTGAAGTaGCGCACGCACTTGTGCCTTAGGTTGCCCATGAAG +
Preference number: 6 (lower is better)
Translates to: STEPLVPLSAVK*RTHLCLRLPMK
Trigger: CTTCATGGGCAACCTAAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAACGGCACCAACGGCTCCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp TCCGATGAGCTCTTGGGGTGGATTGCCATAGAGATCTaGCAGCTTTTTGGAGGCCTGCAGGTCCAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SDELLGWIAIEI*QLFGGLQVQLG
Trigger: CCCCAGCTGGACCTGCAGGCCTCCAAAAAGCTGCCAGATCTCTATGGCAATCCACCCCAAGAGCTCATCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
ENST00000476683.1
ENST00000491944.1
CDS CAA 72 bp GGCAGGTCCATGTTGATGAGGCTTATCTGGTTGGGCTaGGCGATACGGAGTGGCTCAGACAGGGCATCGGCA +
Preference number: 6 (lower is better)
Translates to: GRSMLMRLIWLG*AIRSGSDRASA
Trigger: TGCCGATGCCCTGTCTGAGCCACTCCGTATCGCCAAGCCCAACCAGATAAGCCTCATCAACATGGACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 72 bp GCTGTTCTCCTCATCTTCTTCTTGGTCATCTGTGTCTaGCTCGGCCACAGCGATGGGCACACACACGGGCTC +
Preference number: 6 (lower is better)
Translates to: AVLLIFFLVICV*LGHSDGHTHGL
Trigger: GAGCCCGTGTGTGTGCCCATCGCTGTGGCCGAGTCAGACACAGATGACCAAGAAGAAGATGAGGAGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS GCA 72 bp TCAGTAAACGGGTCCATGACCACCAACTTCACTCCCTaGTTGATGGACATCCACAGCGGGCAGCACTCCCAG +
Preference number: 6 (lower is better)
Translates to: SVNGSMTTNFTP*LMDIHSGQHSQ
Trigger: CTGGGAGTGCTGCCCGCTGTGGATGTCCATCAAGCAGGGAGTGAAGTTGGTGGTCATGGACCCGTTTACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp GATGAGGCTTATCTGGTTGGGCTTGGCGATACGGAGTaGCTCAGACAGGGCATCGGCAAAGTCAGACAGGAC +
Preference number: 6 (lower is better)
Translates to: DEAYLVGLGDTE*LRQGIGKVRQD
Trigger: GTCCTGTCTGACTTTGCCGATGCCCTGTCTGAGCCACTCCGTATCGCCAAGCCCAACCAGATAAGCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 72 bp ACCATGGGCAGGTCCATGTTGATGAGGCTTATCTGGTaGGGCTTGGCGATACGGAGTGGCTCAGACAGGGCA +
Preference number: 6 (lower is better)
Translates to: TMGRSMLMRLIW*GLAIRSGSDRA
Trigger: TGCCCTGTCTGAGCCACTCCGTATCGCCAAGCCCAACCAGATAAGCCTCATCAACATGGACCTGCCCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS TCA 72 bp GAGGCTGAGATGATTCATTGCTCTGGGACCATCTTCTaGGTCAGACTTGGGGAGCCTGTCCTCCCCACACTC +
Preference number: 6 (lower is better)
Translates to: EAEMIHCSGTIF*VRLGEPVLPTL
Trigger: GAGTGTGGGGAGGACAGGCTCCCCAAGTCTGACTCAGAAGATGGTCCCAGAGCAATGAATCATCTCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 90 bp GAGTGCCGTAAGGATGTCCACACAGCAAGCTTCCCGGTGGCTCTCTaGGTGATGGTGCTAAGGATAACTGGTGCTAGAAGGCAACCACTC +
Preference number: 6 (lower is better)
Translates to: ECRKDVHTASFPVAL*VMVLRITGARRQPL
Trigger: GAGTGGTTGCCTTCTAGCACCAGTTATCCTTAGCACCATCACCAAGAGAGCCACCGGGAAGCTTGCTGTGTGGACATCCTTACGGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS GCA 72 bp GATTTCAACCCTCCTAACATAGGACTTCGGCTTGAGTaGCGTAAGGATGTCCACACAGCAAGCTTCCCGGTG +
Preference number: 6 (lower is better)
Translates to: DFNPPNIGLRLE*RKDVHTASFPV
Trigger: CACCGGGAAGCTTGCTGTGTGGACATCCTTACGGCACTCAAGCCGAAGTCCTATGTTAGGAGGGTTGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS CAA 72 bp AAGGATGTCCACACAGCAAGCTTCCCGGTGGCTCTCTaGGTGATGGTGCTAAGGATAACTGGTGCTAGAAGG +
Preference number: 6 (lower is better)
Translates to: KDVHTASFPVAL*VMVLRITGARR
Trigger: CCTTCTAGCACCAGTTATCCTTAGCACCATCACCAAGAGAGCCACCGGGAAGCTTGCTGTGTGGACATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS TCA 72 bp TGGTGTAGTTCAAAGGCAAGTCTCCCTCTGTCTGGTTaGTGCACCTCCCAAACTTCCCCGCAAAGAGGTTCA +
Preference number: 6 (lower is better)
Translates to: WCSSKASLPLSG*CTSQTSPQRGS
Trigger: TGAACCTCTTTGCGGGGAAGTTTGGGAGGTGCATCAACCAGACAGAGGGAGACTTGCCTTTGAACTACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CCA 72 bp GATCAAATGAAAATGCAGGTGCTGACTTGGCAGGTCTaGAGGAGGGTCAGAGGTTCTTCATTTCCAACCAGC +
Preference number: 6 (lower is better)
Translates to: DQMKMQVLTWQV*RRVRGSSFPTS
Trigger: GCTGGTTGGAAATGAAGAACCTCTGACCCTCCTCCAGACCTGCCAAGTCAGCACCTGCATTTTCATTTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476683.1
CDS TCA 72 bp TCAGAGGTTCTTCATTTCCAACCAGCTCCCAGGTCATaGCCATGCATTTGTCTTAGGACCAGCAGGGAATCA +
Preference number: 6 (lower is better)
Translates to: SEVLHFQPAPRS*PCICLRTSRES
Trigger: TGATTCCCTGCTGGTCCTAAGACAAATGCATGGTCATGACCTGGGAGCTGGTTGGAAATGAAGAACCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476683.1
CDS CCA 72 bp AGTTCAAGGACTCACACTGGCTCTTGTTGTTCACGATaGTGTAGTTCAAAGGCAAGTCTCCCTCTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: SSRTHTGSCCSR*CSSKASLPLSG
Trigger: ACCAGACAGAGGGAGACTTGCCTTTGAACTACACCATCGTGAACAACAAGAGCCAGTGTGAGTCCTTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333535.9
ENST00000413689.6
ENST00000414099.6
ENST00000423572.7
ENST00000449557.6
ENST00000450102.6
ENST00000455624.6
CDS CAA 90 bp TCAGGTCAGGTGATACAGGAAGCAAGTGCATTTCTGGTCCTAGTTTaGGTTCACATCTTCTGTGATCTGTTGATCAGCTTGTGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SGQVIQEASAFLVLV*VHIFCDLLISLCLA
Trigger: AGCCAGGCACAAGCTGATCAACAGATCACAGAAGATGTGAACCAAAACTAGGACCAGAAATGCACTTGCTTCCTGTATCACCTGACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS TCA 72 bp TGCATTTCTGGTCCTAGTTTTGGTTCACATCTTCTGTaGTCTGTTGATCAGCTTGTGCCTGGCTCAGAAGTC +
Preference number: 6 (lower is better)
Translates to: CISGPSFGSHLL*SVDQLVPGSEV
Trigger: GACTTCTGAGCCAGGCACAAGCTGATCAACAGATCACAGAAGATGTGAACCAAAACTAGGACCAGAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS CAA 72 bp CTGGTCCTAGTTTTGGTTCACATCTTCTGTGATCTGTaGATCAGCTTGTGCCTGGCTCAGAAGTCCTTGAAA +
Preference number: 6 (lower is better)
Translates to: LVLVLVHIFCDL*ISLCLAQKSLK
Trigger: TTTCAAGGACTTCTGAGCCAGGCACAAGCTGATCAACAGATCACAGAAGATGTGAACCAAAACTAGGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491944.1
CDS CAA 72 bp GTGATACAGGAAGCAAGTGCATTTCTGGTCCTAGTTTaGGTTCACATCTTCTGTGATCTGTTGATCAGCTTG +
Preference number: 6 (lower is better)
Translates to: VIQEASAFLVLV*VHIFCDLLISL
Trigger: CAAGCTGATCAACAGATCACAGAAGATGTGAACCAAAACTAGGACCAGAAATGCACTTGCTTCCTGTATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491944.1