RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCN3B (Homo sapiens)

Ensembl gene IDs: ENSG00000166257

Ensembl transcript IDs: ENST00000299333.8, ENST00000392770.6, ENST00000527125.1, ENST00000530277.5, ENST00000655686.1, ENST00000657123.1, ENST00000657191.1, ENST00000659826.1, ENST00000667790.1

Found 1277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCCTCCGTCTCCATCACACACACTGCTCAGCAGAGGCAGCTCTTaGCAAGCCGTGACGCAGGGAGGAAGCACAGAGCATTGCTGGCTC +
Preference number: 1 (lower is better)
Translates to: RPPSPSHTLLSRGSS*QAVTQGGSTEHCWL
Trigger: GAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCTGAGCAGTGTGTGTGATGGAGACGGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR TCA 90 bp CTCCATCACACACACTGCTCAGCAGAGGCAGCTCTTGCCAAGCCGTaGCGCAGGGAGGAAGCACAGAGCATTGCTGGCTCTGAGGGTCAG +
Preference number: 1 (lower is better)
Translates to: LHHTHCSAEAALAKP*RREEAQSIAGSEGQ
Trigger: CTGACCCTCAGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCTGAGCAGTGTGTGTGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR TCA 90 bp AAAGGCTGGGGTAGGGACAGGCAGGGAGTGTTTGGGTTGGGGCTCTaGTTCAAGACCGAGGTGACAGTGAAGGTCAGCAGGGCAAGGTGC +
Preference number: 1 (lower is better)
Translates to: KGWGRDRQGVFGLGL*FKTEVTVKVSRARC
Trigger: GCACCTTGCCCTGCTGACCTTCACTGTCACCTCGGTCTTGAATCAGAGCCCCAACCCAAACACTCCCTGCCTGTCCCTACCCCAGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR TCA 90 bp TGCCAAGCCGTGACGCAGGGAGGAAGCACAGAGCATTGCTGGCTCTaGGGGTCAGCTGGCCTGGGATGGAGACCGAGTTTGATATATAAA +
Preference number: 1 (lower is better)
Translates to: CQAVTQGGSTEHCWL*GSAGLGWRPSLIYK
Trigger: TTTATATATCAAACTCGGTCTCCATCCCAGGCCAGCTGACCCTCAGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCACGGCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR TCA 90 bp GGATGCAGGACTCCGGTTGCAACAGAAACACCTGAGTTAGGCTGCTaGAAGGCCTTCCCACTCACGAACACGGAACTAGCTGTAGGAGTC +
Preference number: 1 (lower is better)
Translates to: GCRTPVATETPELGC*KAFPLTNTELAVGV
Trigger: GACTCCTACAGCTAGTTCCGTGTTCGTGAGTGGGAAGGCCTTTCAGCAGCCTAACTCAGGTGTTTCTGTTGCAACCGGAGTCCTGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR GCA 90 bp CAGTTGTGGGCAACAAAGTCACTTGTACAACCTGCCATCCACATCTaGCTTCCCCTCCCATGTTCCTGTAGGTCACCTCATGTCACACTG +
Preference number: 1 (lower is better)
Translates to: QLWATKSLVQPAIHI*LPLPCSCRSPHVTL
Trigger: CAGTGTGACATGAGGTGACCTACAGGAACATGGGAGGGGAAGGCAGATGTGGATGGCAGGTTGTACAAGTGACTTTGTTGCCCACAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR CCA 90 bp GTTCAGGCCACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGATGGCAAGGTA +
Preference number: 1 (lower is better)
Translates to: VQATSCHTAPVLFLH*YRRVLLVLRWDGKV
Trigger: TACCTTGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGTGGCCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR CCA 90 bp TCCAGCCCAGCCCAGCCCAAAAATTCTTTGACCAAAGAAGGGAGTTaGAGAATCCTGTGCCTCTGTTACCATGGGCAAGTTCAGATTGCC +
Preference number: 1 (lower is better)
Translates to: SSPAQPKNSLTKEGS*RILCLCYHGQVQIA
Trigger: GGCAATCTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGTCAAAGAATTTTTGGGCTGGGCTGGGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR TCA 90 bp ATTGCTGGCTCTGAGGGTCAGCTGGCCTGGGATGGAGACCGAGTTTaGTATATAAATCAGACTTGCTTGGAAGTGCTTATCTCCTGCGTC +
Preference number: 1 (lower is better)
Translates to: IAGSEGQLAWDGDRV*YINQTCLEVLISCV
Trigger: GACGCAGGAGATAAGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCCAGCTGACCCTCAGAGCCAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR TCA 90 bp TTAAAGAATTACCCTGAGGGCGGGGACCCCAGGCAGGGTAGACAGTaGCCTAAGGGACCAAATTTAAAGTCACTTCAGTTGTGGGCAACA +
Preference number: 1 (lower is better)
Translates to: LKNYPEGGDPRQGRQ*PKGPNLKSLQLWAT
Trigger: TGTTGCCCACAACTGAAGTGACTTTAAATTTGGTCCCTTAGGTCACTGTCTACCCTGCCTGGGGTCCCCGCCCTCAGGGTAATTCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR GCA 90 bp GGATCTAGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATaGTTCAGGATCTTTCTGTCACTGGAGAACCTAGACAGGCGTGCT +
Preference number: 1 (lower is better)
Translates to: GSSSGVLSSREHVSP*FRIFLSLENLDRRA
Trigger: AGCACGCCTGTCTAGGTTCTCCAGTGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCTAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 90 bp AGGATCTTTCTGTCACTGGAGAACCTAGACAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGCCATGAACCTGACAAAACTGACTTC +
Preference number: 1 (lower is better)
Translates to: RIFLSLENLDRRASL*CCSKVGHEPDKTDF
Trigger: GAAGTCAGTTTTGTCAGGTTCATGGCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCTGTCTAGGTTCTCCAGTGACAGAAAGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 90 bp AACCTATGGAATATGGTCTTTCCCTATAAAGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTGAATCCCAGTCACCTTCATCTTCTT +
Preference number: 1 (lower is better)
Translates to: NLWNMVFPYKGRSQV*GTSLSLNPSHLHLL
Trigger: AAGAAGATGAAGGTGACTGGGATTCAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCCTTTATAGGGAAAGACCATATTCCATAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 90 bp GATTGCCTCGACACTCAGGTCAAAGCAGTTCACCTTCCGAAGCGCTaGCATCATACAGAGCTTTCTGACTTAAAGAATTACCCTGAGGGC +
Preference number: 1 (lower is better)
Translates to: DCLDTQVKAVHLPKR*HHTELSDLKNYPEG
Trigger: GCCCTCAGGGTAATTCTTTAAGTCAGAAAGCTCTGTATGATGTCAGCGCTTCGGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR TCA 90 bp GGCAAGGTAGTCAGACGCGTTTTCTTGGGCTGCCTCTTCGGCTTTTaGGACCTTTCTGTAGCAATATATCATCTCGATGAGCAGCCACAA +
Preference number: 1 (lower is better)
Translates to: GKVVRRVFLGCLFGF*DLSVAIYHLDEQPQ
Trigger: TTGTGGCTGCTCATCGAGATGATATATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGACTACCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR GCA 90 bp CAGCCCAAAAATTCTTTGACCAAAGAAGGGAGTTGGAGAATCCTGTaGCTCTGTTACCATGGGCAAGTTCAGATTGCCTCGACACTCAGG +
Preference number: 1 (lower is better)
Translates to: QPKNSLTKEGSWRIL*LCYHGQVQIASTLR
Trigger: CCTGAGTGTCGAGGCAATCTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGTCAAAGAATTTTTGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR CCA 90 bp GGCAATCATGCATACTGCCGGGTTCAACTTAGATACACGAGCTATTaGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTA +
Preference number: 1 (lower is better)
Translates to: GNHAYCRVQLRYTSY*ATEENGVVVSILLL
Trigger: TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGTATGCATGATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CCA 90 bp TTTGACCAAAGAAGGGAGTTGGAGAATCCTGTGCCTCTGTTACCATaGGCAAGTTCAGATTGCCTCGACACTCAGGTCAAAGCAGTTCAC +
Preference number: 1 (lower is better)
Translates to: FDQRRELENPVPLLP*ASSDCLDTQVKAVH
Trigger: GTGAACTGCTTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR TCA 90 bp TTCCCTATAAAGGGAGGTCCCAGGTCTGAGGGACCTCTCTCTCGCTaGATCCCAGTCACCTTCATCTTCTTACATTCCATAAAGCATCTT +
Preference number: 1 (lower is better)
Translates to: FPIKGGPRSEGPLSR*IPVTFIFLHSIKHL
Trigger: AAGATGCTTTATGGAATGTAAGAAGATGAAGGTGACTGGGATTCAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCCTTTATAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 90 bp CAGCCACAAGGTGAGGAAGACCAGAAGGATGTACATCATGATTTCTaGGACCACAGAGGTGAAGTCCTCTCCAGCTTCCATTTTAGTCAT +
Preference number: 1 (lower is better)
Translates to: QPQGEEDQKDVHHDF*DHRGEVLSSFHFSH
Trigger: ATGACTAAAATGGAAGCTGGAGAGGACTTCACCTCTGTGGTCTCAGAAATCATGATGTACATCCTTCTGGTCTTCCTCACCTTGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR TCA 90 bp TGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTTTTCT +
Preference number: 1 (lower is better)
Translates to: CGSKHLATTASWWHP*AMGLEKFHTEANFS
Trigger: AGAAAAATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 90 bp TGGGCCATGAACCTGACAAAACTGACTTCAGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACCCGAACTAATCACTCCTGCTTCCTT +
Preference number: 1 (lower is better)
Translates to: WAMNLTKLTSGNPSS*HTFALTRTNHSCFL
Trigger: AAGGAAGCAGGAGTGATTAGTTCGGGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCCTGAAGTCAGTTTTGTCAGGTTCATGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 90 bp AGCTTGACAGAGTGGGTGCAAAAAGATGTTAGTAGAATGAGTGGATaGTCAGACTGGCAAGCACACCAAGCACTATTCAGATACATTTGC +
Preference number: 1 (lower is better)
Translates to: SLTEWVQKDVSRMSG*SDWQAHQALFRYIC
Trigger: GCAAATGTATCTGAATAGTGCTTGGTGTGCTTGCCAGTCTGATCATCCACTCATTCTACTAACATCTTTTTGCACCCACTCTGTCAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR CCA 90 bp GTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATaGGACTGGAAAAATTTCACACTGAGGCCAATTTTTCTAACTATA +
Preference number: 1 (lower is better)
Translates to: VSILLLPQAGGIHEL*DWKNFTLRPIFLTI
Trigger: TATAGTTAGAAAAATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CCA 90 bp AGCCAAGCTTGGCCTTTAGTGAATTGTGTTATTGAGGATCAGACATaGGAAATATCCAGCACCAAGACAACAGATGGGGTTTCTAAAGTG +
Preference number: 1 (lower is better)
Translates to: SQAWPLVNCVIEDQT*EISSTKTTDGVSKV
Trigger: CACTTTAGAAACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAACACAATTCACTAAAGGCCAAGCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR TCA 90 bp AGGTGGGTGGAGATTGGAAGTAGGCTGGTGATCACAGTACCTTATTaGTTTACAGTCATTATCAAATCTCCCAGGAAGGAGTTTAATTGC +
Preference number: 1 (lower is better)
Translates to: RWVEIGSRLVITVPY*FTVIIKSPRKEFNC
Trigger: GCAATTAAACTCCTTCCTGGGAGATTTGATAATGACTGTAAATCAATAAGGTACTGTGATCACCAGCCTACTTCCAATCTCCACCCACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR TCA 90 bp GAAAATCAGATTGAGCCAAGCTTGGCCTTTAGTGAATTGTGTTATTaGGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGG +
Preference number: 1 (lower is better)
Translates to: ENQIEPSLAFSELCY*GSDMGNIQHQDNRW
Trigger: CCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAACACAATTCACTAAAGGCCAAGCTTGGCTCAATCTGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR TCA 90 bp AACAAGGAGTTTACTGAAAAACAGCACATACAGGCATTACGTTGTTaGGGGCTTAGGTGGTCAGGAACATTTCCAGAGTTTGGATTGTGT +
Preference number: 1 (lower is better)
Translates to: NKEFTEKQHIQALRC*GLRWSGTFPEFGLC
Trigger: ACACAATCCAAACTCTGGAAATGTTCCTGACCACCTAAGCCCTCAACAACGTAATGCCTGTATGTGCTGTTTTTCAGTAAACTCCTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR CCA 90 bp CATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTaGACCTGTCACTTAATTAAAATGAAACACGAGATATTGACTAAA +
Preference number: 1 (lower is better)
Translates to: HLSPLLSLGAEGCHT*TCHLIKMKHEILTK
Trigger: TTTAGTCAATATCTCGTGTTTCATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR GCA 90 bp AAGATATATTCTGAAGTGTGTCTAGCTCTTGCTTCTCTTTCTTCCTaGAAAGATGCAGTGACACAGCCTTTTCCCTCAGATTTATGTGAG +
Preference number: 1 (lower is better)
Translates to: KIYSEVCLALASLSS*KDAVTQPFPSDLCE
Trigger: CTCACATAAATCTGAGGGAAAAGGCTGTGTCACTGCATCTTTGCAGGAAGAAAGAGAAGCAAGAGCTAGACACACTTCAGAATATATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR CCA 90 bp ATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTaGAAAAATTTCACACTGAGGCCAATTTTTCTAACTATAAAGTTA +
Preference number: 1 (lower is better)
Translates to: ILLLPQAGGIHELWD*KNFTLRPIFLTIKL
Trigger: TAACTTTATAGTTAGAAAAATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 90 bp ATCAGACTGGCAAGCACACCAAGCACTATTCAGATACATTTGCAGTaGCTAGGTGAATTCACTGAATTAGGGATTTTTCATTTACAAAAT +
Preference number: 1 (lower is better)
Translates to: IRLASTPSTIQIHLQ*LGEFTELGIFHLQN
Trigger: ATTTTGTAAATGAAAAATCCCTAATTCAGTGAATTCACCTAGTCACTGCAAATGTATCTGAATAGTGCTTGGTGTGCTTGCCAGTCTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR CAA 90 bp GGGAAGCGATGGGGCCCTTGGGGCGCCCTCCTGATGCCATTGACATaGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: GKRWGPWGALLMPLT*LNMGCPVPQVFRPP
Trigger: AGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CAA 90 bp AGGCAGCTCTTGCCAAGCCGTGACGCAGGGAGGAAGCACAGAGCATaGCTGGCTCTGAGGGTCAGCTGGCCTGGGATGGAGACCGAGTTT +
Preference number: 2 (lower is better)
Translates to: RQLLPSRDAGRKHRA*LALRVSWPGMETEF
Trigger: AAACTCGGTCTCCATCCCAGGCCAGCTGACCCTCAGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGAAGCGATGGGGCCCTTaGGGCGCCCTCCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVKRWGP*GALLMP
Trigger: TGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CAA 90 bp CATGAAGGGAAGCGATGGGGCCCTTGGGGCGCCCTCCTGATGCCATaGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: HEGKRWGPWGALLMP*TLLNMGCPVPQVFR
Trigger: CCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGCTTGTCCCTGGGTGCTaGAGGATGTCACACTTGGAC +
Preference number: 2 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLLVPGC*RMSHLD
Trigger: GTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAG...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTG +
Preference number: 2 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVGRSQV*GTSLSL
Trigger: CAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGCCTGCAAAGATGCAGTaGCACAGCCTTTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLPAKMQ*HSLFPQ
Trigger: CTGAGGGAAAAGGCTGTGTCACTGCATCTTTGCAGG...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAAGCGATGGGGCCCTTaGGGCGCCCTCCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETKRWGP*GALLMP
Trigger: TGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACAAGCGATGGGGCCCTTaGGGCGCCCTCCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHKRWGP*GALLMP
Trigger: TGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTCATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGTGCTTTTCAGACCTGTaGCTGCATGGCACACTAAAG +
Preference number: 2 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLCFSDL*LHGTLK
Trigger: CTTTAGTGTGCCATGCAGTCACAGGTCTGAAAAGCA...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCCTGAGTTAGGCTGCTaGAAGGCCTTCCCACTCACG +
Preference number: 2 (lower is better)
Translates to: WATEENGVVVSILLLPQAPELGC*KAFPLT
Trigger: CGTGAGTGGGAAGGCCTTTCAGCAGCCTAACTCAGG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR-3UTR GCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 2 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR GCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACA +
Preference number: 2 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETNAQVV*PQGGHT
Trigger: TGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLRGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR CAA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTaGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGG +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSI*LLPQAGGIHELWDW
Trigger: CCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAGAACAATGGATGCATaGAGGGAAGCGATGGGGCCC +
Preference number: 2 (lower is better)
Translates to: WATEENGVVVSILLLPQARTMDA*REAMGP
Trigger: GGGCCCCATCGCTTCCCTTCATGCATCCATTGTTCT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 2 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNRRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGAGAGGCCGAGGCATaGGAATTGCTTGAACCCAAG +
Preference number: 2 (lower is better)
Translates to: WATEENGVVVSILLLPQAGEAEA*ELLEPK
Trigger: CTTGGGTTCAAGCAATTCTCATGCCTCGGCCTCTCC...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTG +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWGRSQV*GTSLSL
Trigger: CAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCC...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCAGTTGAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: WATEENGVVVSILLLPQAQLRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTCAACTG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGTTCTTCCTGCAAAGATaGAGTGACACAGCCTTTTCC +
Preference number: 2 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLFFLQR*SDTAFS
Trigger: GGAAAAGGCTGTGTCACTGCATCTTTGCAGGAAGAA...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGAAGCGATGGGGCCCTTaGGGCGCCCTCCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEKRWGP*GALLMP
Trigger: TGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAAAGCGATGGGGCCCTTaGGGCGCCCTCCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSKRWGP*GALLMP
Trigger: TGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CAA 90 bp GGAGTTGGAGAATCCTGTGCCTCTGTTACCATGGGCAAGTTCAGATaGCCTCGACACTCAGGTCAAAGCAGTTCACCTTCCGAAGCGCTG +
Preference number: 2 (lower is better)
Translates to: GVGESCASVTMGKFR*PRHSGQSSSPSEAL
Trigger: CAGCGCTTCGGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAGAACAATGGATGCATaGAGGGAAGCGATGGGGCCC +
Preference number: 2 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKRTMDA*REAMGP
Trigger: GGGCCCCATCGCTTCCCTTCATGCATCCATTGTTCT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGGAGAGGCCGAGGCATaGGAATTGCTTGAACCCAAG +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVGEAEA*ELLEPK
Trigger: CTTGGGTTCAAGCAATTCTCATGCCTCGGCCTCTCC...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGCAGTTGAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: VVVSILLLPQAGGIHELWQLRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTCAACTG...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGCTGAGGTGGGAGGATTaGTTAAACCTGGGGCAGTTG +
Preference number: 2 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVLRWED*LNLGQL
Trigger: CAACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAG...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 2 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVCNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGAGAACAATGGATGCATaGAGGGAAGCGATGGGGCCC +
Preference number: 2 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWRTMDA*REAMGP
Trigger: GGGCCCCATCGCTTCCCTTCATGCATCCATTGTTCT...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGGAGAGGCCGAGGCATaGGAATTGCTTGAACCCAAG +
Preference number: 2 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWGEAEA*ELLEPK
Trigger: CTTGGGTTCAAGCAATTCTCATGCCTCGGCCTCTCC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGCCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 2 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 2 (lower is better)
Translates to: WATEENGVVVSILLLPQAPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGCTTGTCCCTGGGTGCTaGAGGATGTCACACTTGGAC +
Preference number: 2 (lower is better)
Translates to: RVDLSPVRACERSIAIDKLVPGC*RMSHLD
Trigger: GTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAG...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACAGTTGAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLQLRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTCAACTG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLNISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR GCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGCTGAGGTGGGAGGATTaGTTAAACCTGGGGCAGTTG +
Preference number: 2 (lower is better)
Translates to: VVVSILLLPQAGGIHELWLRWED*LNLGQL
Trigger: CAACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAG...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGCATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTCATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGCCCCTCTCTTGTCCCTaGGTGCTGAAGGATGTCACA +
Preference number: 2 (lower is better)
Translates to: RVDLSPVRACERSIAIDKPLSCP*VLKDVT
Trigger: TGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGG...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTTAACGGTCTGGTTTTaGGCCAGGCACAGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: WATEENGVVVSILLLPQALTVWF*ARHSCS
Trigger: TGAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGAGATACACGAGCTATTaGGCCACCGAGGAAAACGGT +
Preference number: 2 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVRYTSY*ATEENG
Trigger: ACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCT...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCTGTGGCCTGGAGGTTaGGATTCCTGGATCCTTTTT +
Preference number: 2 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNLWPGG*DSWILF
Trigger: AAAAAGGATCCAGGAATCCCAACCTCCAGGCCACAG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR CAA 90 bp GTCCAGCCCAGCCCAGCCCAAAAATTCTTTGACCAAAGAAGGGAGTaGGAGAATCCTGTGCCTCTGTTACCATGGGCAAGTTCAGATTGC +
Preference number: 2 (lower is better)
Translates to: VQPSPAQKFFDQRRE*ENPVPLLPWASSDC
Trigger: GCAATCTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGTCAAAGAATTTTTGGGCTGGGCTGGGCTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR TCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTAGAACAATGGATGCATaGAGGGAAGCGATGGGGCCC +
Preference number: 2 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIRTMDA*REAMGP
Trigger: GGGCCCCATCGCTTCCCTTCATGCATCCATTGTTCT...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKSWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVSWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACA +
Preference number: 2 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMNAQVV*PQGGHT
Trigger: TGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATT...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: WATEENGVVVSILLLPQALASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGTGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 2 (lower is better)
Translates to: RVDLSPVRACERSIAIDKCNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGTTTGGGAGGCTGAGGTaGGTGGGTCATTTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWFGRLR*VGHLRS
Trigger: TGACCTCAAATGACCCACCCACCTCAGCCTCCCAAA...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTCCCCTCTCTTGTCCCTaGGTGCTGAAGGATGTCACA +
Preference number: 2 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIPLSCP*VLKDVT
Trigger: TGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGG...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCTGTTCTCAGATGGGATaGCAAGGTAGTCAGACGCGT +
Preference number: 2 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETCSQMG*QGSQTR
Trigger: ACGCGTCTGACTACCTTGCCATCCCATCTGAGAACA...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 2 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSRRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGCTTGTCCCTGGGTGCTaGAGGATGTCACACTTGGAC +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWLVPGC*RMSHLD
Trigger: GTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAG...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR TCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTGGGGAGGAAGTGGGCTaGACTAATCATGAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAGEEVG*TNHELS
Trigger: GGACAGCTCATGATTAGTTCAGCCCACTTCCTCCCC...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAAGGCAGGGTAGACAGTaGCCTAAGGGACCAAATTTA +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVRQGRQ*PKGPNL
Trigger: TAAATTTGGTCCCTTAGGTCACTGTCTACCCTGCCT...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR TCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGTACATCATGATTTCTaGGACCACAGAGGTGAAGTC +
Preference number: 2 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNVHHDF*DHRGEV
Trigger: GACTTCACCTCTGTGGTCTCAGAAATCATGATGTAC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACA +
Preference number: 2 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQNAQVV*PQGGHT
Trigger: TGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATT...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGTATATAAATCAGACTTaGTTGGAAGTGCTTATCTCC +
Preference number: 2 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLYINQT*LEVLIS
Trigger: GGAGATAAGCACTTCCAAGCAAGTCTGATTTATATA...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR GCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCCTGCCATCCACATCTaGCTTCCCCTCCCATGTTCC +
Preference number: 2 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSPAIHI*LPLPCS
Trigger: GGAACATGGGAGGGGAAGGCAGATGTGGATGGCAGG...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR GCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAATGGGCAAGTTCAGATTaGCTCGACACTCAGGTCAAA +
Preference number: 2 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKWASSD*LDTQVK
Trigger: TTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCA...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHLASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: VVVSILLLPQAGGIHELWGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGCCAGGAAGTGTAAACTaGGCAGCACCTAAGGCTTAT +
Preference number: 2 (lower is better)
Translates to: VVVSILLLPQAGGIHELWPGSVN*AAPKAY
Trigger: ATAAGCCTTAGGTGCTGCCCAGTTTACACTTCCTGG...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGAATGTGTTAACGGTCTaGTTTTGGGCCAGGCACAGT +
Preference number: 2 (lower is better)
Translates to: VVVSILLLPQAGGIHELWNVLTV*FWARHS
Trigger: ACTGTGCCTGGCCCAAAACCAGACCGTTAACACATT...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CCTGTTCTATTCCTCCACTGGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGATTCAGACGCGTTTTCTTaGGCTGCCTCTTCGGCTTTT +
Preference number: 2 (lower is better)
Translates to: PVLFLHWYRRVLLVLRWDSDAFS*AASSAF
Trigger: AAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGA...ATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGA +
Preference number: 2 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETLLVLR*DGKVVR
Trigger: TCTGACTACCTTGCCATCCCATCTGAGAACAAGGAG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAAATAAACCTGTGGCCTaGAGGTTGGGATTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVNKPVA*RLGFLD
Trigger: ATCCAGGAATCCCAACCTCCAGGCCACAGGTTTATT...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR CAA 90 bp GACAGTGAAGGTCAGCAGGGCAAGGTGCTCTCAGGGCCAACTGGATaGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAA +
Preference number: 2 (lower is better)
Translates to: DSEGQQGKVLSGPTG*SNHIHGCEVVRMGK
Trigger: TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGGCCCTGAGAGCACCTTGCCCTGCTGACCTTCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR TCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 2 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGGTGCACAGAAATTTTaGGAGGAAGAACTCAGGAAT +
Preference number: 2 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVGAQKF*EEELRN
Trigger: ATTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGCACAGAAATTTTaGGAGGAAGAACTCAGGAAT +
Preference number: 2 (lower is better)
Translates to: WATEENGVVVSILLLPQAGAQKF*EEELRN
Trigger: ATTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACC...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGGCATGAGAATTGCTTaGACCCAAGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIGMRIA*TQEAEV
Trigger: AACCTCTGCCTCTTGGGTTCAAGCAATTCTCATGCC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGCTTGTCCCTGGGTGCTaGAGGATGTCACACTTGGAC +
Preference number: 2 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMLVPGC*RMSHLD
Trigger: GTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAG...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: AGGIHELWDWKNFTLRPISWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTGTGGTAGAGAAGCAGTaGGTGGGATTAGGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAVVEKQ*VGLGVR
Trigger: TCTCACCCCTAATCCCACTCACTGCTTCTCTACCAC...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGCCTGCAAAGATGCAGTaGCACAGCCTTTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWPAKMQ*HSLFPQ
Trigger: CTGAGGGAAAAGGCTGTGTCACTGCATCTTTGCAGG...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTTGCAACAGAAACACCTaGGTTAGGCTGCTGAAAGGC +
Preference number: 2 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLCNRNT*VRLLKG
Trigger: GCCTTTCAGCAGCCTAACTCAGGTGTTTCTGTTGCA...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR-3UTR TCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGCCCTGTCTTTAACTTaGTCTTTTCCTTCATGCCCC +
Preference number: 2 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIALSLT*SFPSCP
Trigger: GGGGCATGAAGGAAAAGATCAAGTTAAAGACAGGGC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR-3UTR GCA 90 bp ACCAAAGAAGGGAGTTGGAGAATCCTGTGCCTCTGTTACCATGGGCAAGTTCAGGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 2 (lower is better)
Translates to: TKEGSWRILCLCYHGQVQEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...CTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR GCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAAAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACA +
Preference number: 2 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKNAQVV*PQGGHT
Trigger: TGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATT...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR GCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACA +
Preference number: 2 (lower is better)
Translates to: NISLRCTLLLEDISESQINAQVV*PQGGHT
Trigger: TGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATT...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACA +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASENAQVV*PQGGHT
Trigger: TGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATT...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGCCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 2 (lower is better)
Translates to: VVVSILLLPQAGGIHELWPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 2 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGGCAATCATGCATACTaGCGGGTTCAACTTAGATAC +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVGNHAY*RVQLRY
Trigger: GTATCTAAGTTGAACCCGGCAGTATGCATGATTGCC...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTCCCCACACTTTGGCCTaGTCACTAGCAGTGATAATG +
Preference number: 2 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIPHTLA*SLAVIM
Trigger: CATTATCACTGCTAGTGAGCAGGCCAAAGTGTGGGG...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGATTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGLASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTTGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 2 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSACNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTACCTGGGGGCTGAGGTaGGAGGATTGCTTAAACCTG +
Preference number: 2 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVTWGLR*EDCLNL
Trigger: CAGGTTTAAGCAATCCTCCCACCTCAGCCCCCAGGT...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAAATGTGTTAACGGTCTaGTTTTGGGCCAGGCACAGT +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLNVLTV*FWARHS
Trigger: ACTGTGCCTGGCCCAAAACCAGACCGTTAACACATT...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLRGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTAGACAGGGAGGTGGGTaGAGATTGGAAGTAGGCTGG +
Preference number: 2 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVRQGGG*RLEVGW
Trigger: CCAGCCTACTTCCAATCTCCACCCACCTCCCTGTCT...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGCAGGCAGGGAGTGTTTaGGTTGGGGCTCTGATTCAA +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWQAGSV*VGALIQ
Trigger: TTGAATCAGAGCCCCAACCCAAACACTCCCTGCCTG...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTTGTTCTCAGATGGGATaGCAAGGTAGTCAGACGCGT +
Preference number: 2 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLCSQMG*QGSQTR
Trigger: ACGCGTCTGACTACCTTGCCATCCCATCTGAGAACA...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR CAA 90 bp CCAGCACTTGTACAAAGTCATTTGGAGCACAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAGGGTGAGGTT +
Preference number: 2 (lower is better)
Translates to: PALVQSHLEHRGEIQ*ALECLVGKLGEGEV
Trigger: AACCTCACCCTCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAGTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CAA 90 bp CTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGTAC +
Preference number: 2 (lower is better)
Translates to: LKLPLVLPKSPVLVF*EGTLETHQDLALEY
Trigger: GTACTCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CAA 90 bp TCAGCTGGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTaGCTTGGAAGTGCTTATCTCCTGCGTCCTGCTGCAAACTCAACT +
Preference number: 2 (lower is better)
Translates to: SAGLGWRPSLIYKSD*LGSAYLLRPAANST
Trigger: AGTTGAGTTTGCAGCAGGACGCAGGAGATAAGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCCAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR TCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTATGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGATGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 2 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIRRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAGAAAAAGGCAATCATaGATACTGCCGGGTTCAACT +
Preference number: 2 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKRKRQS*ILPGST
Trigger: AGTTGAACCCGGCAGTATGCATGATTGCCTTTTTCT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: SSESIRVDLSPVRACERSLASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGCACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: VVVSILLLPQAGGIHELWHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACATGAGCTATGGGACTaGAAAAATTTCACACTGAGG +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVHELWD*KNFTLR
Trigger: CCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAAAGTCACTTCAGTTGTaGGCAACAAAGTCACTTGTA +
Preference number: 2 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGKSLQL*ATKSLV
Trigger: TACAAGTGACTTTGTTGCCCACAACTGAAGTGACTT...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR CCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTTCAGACGCGTTTTCTTaGGCTGCCTCTTCGGCTTTT +
Preference number: 2 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFSDAFS*AASSAF
Trigger: AAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGA...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRVLFLH*YRRVLL
Trigger: AAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAAC...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR CAA 90 bp CTTGTACAAAGTCATTTGGAGCACAGGGGAGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAACTAGGAGAGGGTGAGGTTGAGTCT +
Preference number: 2 (lower is better)
Translates to: LVQSHLEHRGEIQLA*ECLVGKLGEGEVES
Trigger: AGACTCAACCTCACCCTCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGAGAACAATGGATGCATaGAGGGAAGCGATGGGGCCC +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASERTMDA*REAMGP
Trigger: GGGCCCCATCGCTTCCCTTCATGCATCCATTGTTCT...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASERRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 2 (lower is better)
Translates to: NISLRCTLLLEDISESQIRRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGGTGCACAGAAATTTTaGGAGGAAGAACTCAGGAAT +
Preference number: 2 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIGAQKF*EEELRN
Trigger: ATTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVSWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR TCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCACCTTCCGAAGCGCTaGCATCATACAGAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSHLPKR*HHTELS
Trigger: AGAAAGCTCTGTATGATGTCAGCGCTTCGGAAGGTG...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR TCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAAGCCCAAAAATTCTTTaGCCAAAGAAGGGAGTTGGA +
Preference number: 2 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGSPKIL*PKKGVG
Trigger: TCCAACTCCCTTCTTTGGTCAAAGAATTTTTGGGCT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR GCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 2 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTCCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 2 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTATTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLLYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACTTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 2 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHLYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGTGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 2 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQCNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAGATGCACTCTCCTTTTaGAGGATATTTCAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLDALSF*RIFQSH
Trigger: GTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATC...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGCATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 2 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSARGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCACTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGA +
Preference number: 2 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSLLVLR*DGKVVR
Trigger: TCTGACTACCTTGCCATCCCATCTGAGAACAAGGAG...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSACSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR TCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGGTGCACAGAAATTTTaGGAGGAAGAACTCAGGAAT +
Preference number: 2 (lower is better)
Translates to: SSESIRVDLSPVRACERSGAQKF*EEELRN
Trigger: ATTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGTCCCTCAGATTTATGTaGGGAGGACTCACAGATTCT +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWSLRFM*GGLTDS
Trigger: AGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGA...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGGTACATCATGATTTCTaGGACCACAGAGGTGAAGTC +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWVHHDF*DHRGEV
Trigger: GACTTCACCTCTGTGGTCTCAGAAATCATGATGTAC...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659826.1
3UTR-3UTR GCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 2 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGTTCTTCCTGCAAAGATaGAGTGACACAGCCTTTTCC +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWFFLQR*SDTAFS
Trigger: GGAAAAGGCTGTGTCACTGCATCTTTGCAGGAAGAA...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: RVDLSPVRACERSIAIDKKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTTTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 2 (lower is better)
Translates to: AGGIHELWDWKNFTLRPILYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGCCAGGAAGTGTAAACTaGGCAGCACCTAAGGCTTAT +
Preference number: 2 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMPGSVN*AAPKAY
Trigger: ATAAGCCTTAGGTGCTGCCCAGTTTACACTTCCTGG...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGTTTGGGAGGCTGAGGTaGGTGGGTCATTTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASEFGRLR*VGHLRS
Trigger: TGACCTCAAATGACCCACCCACCTCAGCCTCCCAAA...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTCATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 2 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGCATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 2 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: VVVSILLLPQAGGIHELWKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: RVQLRYTSYWATEENGVVKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTTCAGAGGGATTGTGTaGAAAATTACCAATAAGAAG +
Preference number: 2 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVFRGIV*KITNKK
Trigger: CTTCTTATTGGTAATTTTCCACACAATCCCTCTGAA...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAACAGGCAGGGAGTGTTTaGGTTGGGGCTCTGATTCAA +
Preference number: 2 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKQAGSV*VGALIQ
Trigger: TTGAATCAGAGCCCCAACCCAAACACTCCCTGCCTG...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTGTGCCTCTGTTACCATaGGCAAGTTCAGATTGCCTC +
Preference number: 2 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSVPLLP*ASSDCL
Trigger: GAGGCAATCTGAACTTGCCCATGGTAACAGAGGCAC...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR TCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 2 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGTTGGAAGTAGGCTGGTaGTCACAGTACCTTATTGAT +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWLEVGW*SQYLID
Trigger: ATCAATAAGGTACTGTGATCACCAGCCTACTTCCAA...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR TCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTAAGATGTTAGTAGAATaGGTGGATGATCAGACTGGC +
Preference number: 2 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAKMLVE*VDDQTG
Trigger: GCCAGTCTGATCATCCACTCATTCTACTAACATCTT...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR GCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 2 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGCGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 2 (lower is better)
Translates to: RVDLSPVRACERSIAIDKRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNILASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCACACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 2 (lower is better)
Translates to: TSYWATEENGVVVSILLLEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 2 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAATTCAGAGGGATTGTGTaGAAAATTACCAATAAGAAG +
Preference number: 2 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKFRGIV*KITNKK
Trigger: CTTCTTATTGGTAATTTTCCACACAATCCCTCTGAA...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGAGATACACGAGCTATTaGGCCACCGAGGAAAACGGT +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASERYTSY*ATEENG
Trigger: ACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCT...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNICSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 2 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGATTCACTCTGAGGACTaGATCTCCGCTTCATTATTT +
Preference number: 2 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEIHSED*ISASLF
Trigger: AAATAATGAAGCGGAGATTCAGTCCTCAGAGTGAAT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTTTTAGTCATATCGTCTaGTCCGTTATGTCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLFSHIV*SVMSLS
Trigger: AGAAAGAGACATAACGGATCAGACGATATGACTAAA...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR-3UTR GCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCCGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 2 (lower is better)
Translates to: SSESIRVDLSPVRACERSRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGACGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 2 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGGCAATCATGCATACTaGCGGGTTCAACTTAGATAC +
Preference number: 2 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQGNHAY*RVQLRY
Trigger: GTATCTAAGTTGAACCCGGCAGTATGCATGATTGCC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAAGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGCATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASEHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGAAAAGGAAGCAGCTATaGTCTAAGTGGAAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWKRKQL*SKWKEN
Trigger: GTTCTCTTTCCACTTAGACCATAGCTGCTTCCTTTT...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAAAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKRGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTAACAGACATCTAGTCTaGGTCTTTCGTAGGATTATG +
Preference number: 2 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSANRHLV*VFRRIM
Trigger: CATAATCCTACGAAAGACCCAGACTAGATGTCTGTT...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR CAA 90 bp GAGAGGAGGGAGTTGCTGTCTCCTACTTCCCAGCACATTCCTGCTTaGAAAAGTAACTTTCCTAGTAATATTTCTAGTTGGACATCTAAG +
Preference number: 2 (lower is better)
Translates to: ERRELLSPTSQHIPA*KSNFPSNISSWTSK
Trigger: CTTAGATGTCCAACTAGAAATATTACTAGGAAAGTTACTTTTCAAAGCAGGAATGTGCTGGGAAGTAGGAGACAGCAACTCCCTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 2 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTGGTGCACAGAAATTTTaGGAGGAAGAACTCAGGAAT +
Preference number: 2 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIGAQKF*EEELRN
Trigger: ATTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACC...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCACGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 2 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGGGCAATCATGCATACTaGCGGGTTCAACTTAGATAC +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASEGNHAY*RVQLRY
Trigger: GTATCTAAGTTGAACCCGGCAGTATGCATGATTGCC...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGAGAAAAAGGCAATCATaGATACTGCCGGGTTCAACT +
Preference number: 2 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQRKRQS*ILPGST
Trigger: AGTTGAACCCGGCAGTATGCATGATTGCCTTTTTCT...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 2 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSLYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGCACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTTTCAGAGGGATTGTGTaGAAAATTACCAATAAGAAG +
Preference number: 2 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIFRGIV*KITNKK
Trigger: CTTCTTATTGGTAATTTTCCACACAATCCCTCTGAA...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASEGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR TCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCGATAAAATAACTCACTaGGAATTTCCCACCCAGTCC +
Preference number: 2 (lower is better)
Translates to: NISLRCTLLLEDISESQIDKITH*EFPTQS
Trigger: GGACTGGGTGGGAAATTCTCAGTGAGTTATTTTATC...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: NISLRCTLLLEDISESQIHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGGATGCACTCTCCTTTTaGAGGATATTTCAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASEDALSF*RIFQSH
Trigger: GTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATC...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGGGCATCCATGAGCTATaGGACTGGAAAAATTTCACA +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASEGIHEL*DWKNFT
Trigger: TGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCC...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTCGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 2 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: ISDRYHSASLKATQAASENISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR GCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: NISLRCTLLLEDISESQINISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: NISLRCTLLLEDISESQIKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 2 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 3 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 72 bp GTGACGCAGGGAGGAAGCACAGAGCATTGCTGGCTCTaGGGGTCAGCTGGCCTGGGATGGAGACCGAGTTTG +
Preference number: 3 (lower is better)
Translates to: VTQGGSTEHCWL*GSAGLGWRPSL
Trigger: CAAACTCGGTCTCCATCCCAGGCCAGCTGACCCTCAGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR TCA 72 bp ACACACTGCTCAGCAGAGGCAGCTCTTGCCAAGCCGTaGCGCAGGGAGGAAGCACAGAGCATTGCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: THCSAEAALAKP*RREEAQSIAGS
Trigger: AGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCTGAGCAGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CAA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 3 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 3 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CAA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGCTGAATCTATCAGAGTaGACCTCAGCCCAGTCCGTG +
Preference number: 3 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLLNLSE*TSAQSV
Trigger: CACGGACTGGGCTGAGGTCAACTCTGATAGATTCAG...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CAA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 3 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CAA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 3 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 3 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 3 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TGTTCAGGCCACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTGGTACCGGTCAGACGCGTTTTCTaGGGCTGCCTCTTCGGCTTT +
Preference number: 3 (lower is better)
Translates to: CSGHLMSHCSCSIPPLVPVRRVF*GCLFGF
Trigger: AAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGAC...CGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGTGGCCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACTTCATGCCCCACACTTaGGCCTGCTCACTAGCAGTG +
Preference number: 3 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNFMPHT*ACSLAV
Trigger: CACTGCTAGTGAGCAGGCCAAAGTGTGGGGCATGAA...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR TCA 72 bp TACCCTGAGGGCGGGGACCCCAGGCAGGGTAGACAGTaGCCTAAGGGACCAAATTTAAAGTCACTTCAGTTG +
Preference number: 3 (lower is better)
Translates to: YPEGGDPRQGRQ*PKGPNLKSLQL
Trigger: CAACTGAAGTGACTTTAAATTTGGTCCCTTAGGTCACTGTCTACCCTGCCTGGGGTCCCCGCCCTCAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR TCA 72 bp CTCAGGATGCAGGACTCCGGTTGCAACAGAAACACCTaGGTTAGGCTGCTGAAAGGCCTTCCCACTCACGAA +
Preference number: 3 (lower is better)
Translates to: LRMQDSGCNRNT*VRLLKGLPTHE
Trigger: TTCGTGAGTGGGAAGGCCTTTCAGCAGCCTAACTCAGGTGTTTCTGTTGCAACCGGAGTCCTGCATCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR CCA 72 bp CTGGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGATaGCAAGGTAGTCAGACGCGTTTTCTTGGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: LVPQSSPCSQMG*QGSQTRFLGLP
Trigger: AGGCAGCCCAAGAAAACGCGTCTGACTACCTTGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR CCA 72 bp CTCCACTGGTACCGCAGAGTTCTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGACGCGTTTTCTTGGGC +
Preference number: 3 (lower is better)
Translates to: LHWYRRVLLVLR*DGKVVRRVFLG
Trigger: GCCCAAGAAAACGCGTCTGACTACCTTGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 3 (lower is better)
Translates to: NISLRCTLLLEDISESQIEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGACCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACC +
Preference number: 3 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGPVLVF*EGTLET
Trigger: GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGG...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACC +
Preference number: 3 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNPVLVF*EGTLET
Trigger: GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: VVVSILLLPQAGGIHELWVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGACCGCAGAGTTCTCCTaGTTCTCAGATGGGATGGCA +
Preference number: 3 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVTAEFS*FSDGMA
Trigger: TGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGT...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR TCA 72 bp ACTCCGGTTGCAACAGAAACACCTGAGTTAGGCTGCTaGAAGGCCTTCCCACTCACGAACACGGAACTAGCT +
Preference number: 3 (lower is better)
Translates to: TPVATETPELGC*KAFPLTNTELA
Trigger: AGCTAGTTCCGTGTTCGTGAGTGGGAAGGCCTTTCAGCAGCCTAACTCAGGTGTTTCTGTTGCAACCGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR-3UTR CAA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACC +
Preference number: 3 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETPVLVF*EGTLET
Trigger: GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACC +
Preference number: 3 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKPVLVF*EGTLET
Trigger: GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGCAGCACATTCCTGCTTaGAAAAGTAACTTTCCTAGT +
Preference number: 3 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLQHIPA*KSNFPS
Trigger: ACTAGGAAAGTTACTTTTCAAAGCAGGAATGTGCTG...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGTCAGACGCGTTTTCTaGGGCTGCCTCTTCGGCTTT +
Preference number: 3 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHVRRVF*GCLFGF
Trigger: AAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGAC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTCCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACC +
Preference number: 3 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIPVLVF*EGTLET
Trigger: GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGG...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTCCAAGTCTCCTGTCCTaGTCTTCTTGGAGGGAACCT +
Preference number: 3 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIPSLLS*SSWREP
Trigger: AGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGG...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGACCAAGTCTCCTGTCCTaGTCTTCTTGGAGGGAACCT +
Preference number: 3 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGPSLLS*SSWREP
Trigger: AGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGG...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGCCAAGTCTCCTGTCCTaGTCTTCTTGGAGGGAACCT +
Preference number: 3 (lower is better)
Translates to: RVDLSPVRACERSIAIDKPSLLS*SSWREP
Trigger: AGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGG...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGCTGAATCTATCAGAGTaGACCTCAGCCCAGTCCGTG +
Preference number: 3 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWLNLSE*TSAQSV
Trigger: CACGGACTGGGCTGAGGTCAACTCTGATAGATTCAG...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGCTGAGGTGGGAGGATaGCTTAAACCTGGGGCAGTT +
Preference number: 3 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIAEVGG*LKPGAV
Trigger: AACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAGC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGACCAAAGAAGGGAGTaGGAGAATCCTGTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGDQRRE*ENPVPL
Trigger: CAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGTC...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR TCA 72 bp CTGTCACTGGAGAACCTAGACAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGCCATGAACCTGACAAA +
Preference number: 3 (lower is better)
Translates to: LSLENLDRRASL*CCSKVGHEPDK
Trigger: TTTGTCAGGTTCATGGCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCTGTCTAGGTTCTCCAGTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 72 bp AATATGGTCTTTCCCTATAAAGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTGAATCCCAGTCACCTT +
Preference number: 3 (lower is better)
Translates to: NMVFPYKGRSQV*GTSLSLNPSHL
Trigger: AAGGTGACTGGGATTCAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCCTTTATAGGGAAAGACCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR GCA 72 bp AATCCTGTGCCTCTGTTACCATGGGCAAGTTCAGATTaGCTCGACACTCAGGTCAAAGCAGTTCACCTTCCG +
Preference number: 3 (lower is better)
Translates to: NPVPLLPWASSD*LDTQVKAVHLP
Trigger: CGGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCATGGTAACAGAGGCACAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR CCA 72 bp AGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGCACACATACATTATCG +
Preference number: 3 (lower is better)
Translates to: RKNSGISVLMPR*CAHREGTHTLS
Trigger: CGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CCA 72 bp GCATACTGCCGGGTTCAACTTAGATACACGAGCTATTaGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATC +
Preference number: 3 (lower is better)
Translates to: AYCRVQLRYTSY*ATEENGVVVSI
Trigger: GATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 3 (lower is better)
Translates to: SSESIRVDLSPVRACERSALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKRGEIQ*ALECLV
Trigger: AACAAGACACTCCAAAGCCAACTGGATTTCTCCCCT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHRGEIQ*ALECLV
Trigger: AACAAGACACTCCAAAGCCAACTGGATTTCTCCCCT...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 3 (lower is better)
Translates to: WATEENGVVVSILLLPQAPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGATGGGCAAGTTCAGATaGCCTCGACACTCAGGTCAA +
Preference number: 3 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWMGKFR*PRHSGQ
Trigger: TTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCAT...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR CAA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCTGCCTCTTCGGCTTTaGAGACCTTTCTGTAGCAAT +
Preference number: 3 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETLPLRL*RPFCSN
Trigger: ATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR TCA 72 bp AAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAATTTCACACTGAGGCC +
Preference number: 3 (lower is better)
Translates to: KHLATTASWWHP*AMGLEKFHTEA
Trigger: GGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR GCA 72 bp GAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACATACATTATCGCAATA +
Preference number: 3 (lower is better)
Translates to: ELRNFSPNAQVV*PQGGHTYIIAI
Trigger: TATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CCA 72 bp AGAAGGGAGTTGGAGAATCCTGTGCCTCTGTTACCATaGGCAAGTTCAGATTGCCTCGACACTCAGGTCAAA +
Preference number: 3 (lower is better)
Translates to: RRELENPVPLLP*ASSDCLDTQVK
Trigger: TTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR CCA 72 bp ACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGAT +
Preference number: 3 (lower is better)
Translates to: TSCHTAPVLFLH*YRRVLLVLRWD
Trigger: ATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 3 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 3 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 3 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHRGEIQ*ALECLV
Trigger: AACAAGACACTCCAAAGCCAACTGGATTTCTCCCCT...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGCTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 3 (lower is better)
Translates to: VVVSILLLPQAGGIHELWLVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGCCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACC +
Preference number: 3 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWPVLVF*EGTLET
Trigger: GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGG...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CAA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCACCAAGTCTCCTGTCCTaGTCTTCTTGGAGGGAACCT +
Preference number: 3 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSPSLLS*SSWREP
Trigger: AGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGG...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCCAAGTCTCCTGTCCTaGTCTTCTTGGAGGGAACCT +
Preference number: 3 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFPSLLS*SSWREP
Trigger: AGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 3 (lower is better)
Translates to: RVQLRYTSYWATEENGVVPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 3 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 3 (lower is better)
Translates to: WATEENGVVVSILLLPQAWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACTGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 3 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAGATGCACTCTCCTTTaGGAGGATATTTCAGAGTCA +
Preference number: 3 (lower is better)
Translates to: WATEENGVVVSILLLPQARCTLL*EDISES
Trigger: TGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGCTGCCTCTTCGGCTTTaGAGACCTTTCTGTAGCAAT +
Preference number: 3 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWLPLRL*RPFCSN
Trigger: ATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAG...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGACCGCAGAGTTCTCCTaGTTCTCAGATGGGATGGCA +
Preference number: 3 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWTAEFS*FSDGMA
Trigger: TGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGT...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659826.1
3UTR TCA 72 bp GGTGAGGAAGACCAGAAGGATGTACATCATGATTTCTaGGACCACAGAGGTGAAGTCCTCTCCAGCTTCCAT +
Preference number: 3 (lower is better)
Translates to: GEEDQKDVHHDF*DHRGEVLSSFH
Trigger: ATGGAAGCTGGAGAGGACTTCACCTCTGTGGTCTCAGAAATCATGATGTACATCCTTCTGGTCTTCCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR-3UTR CAA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 3 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRRGEIQ*ALECLV
Trigger: AACAAGACACTCCAAAGCCAACTGGATTTCTCCCCT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGACTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 3 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGLVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACCTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 3 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHLVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 3 (lower is better)
Translates to: TSYWATEENGVVVSILLLLVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTATGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 3 (lower is better)
Translates to: RVQLRYTSYWATEENGVVWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAGACTCTCAAAGCACATaGCTAGCATCCACCAAAAAG +
Preference number: 3 (lower is better)
Translates to: TSYWATEENGVVVSILLLDSQST*LASTKK
Trigger: CTTTTTGGTGGATGCTAGCAATGTGCTTTGAGAGTC...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGGGCAACAAAGTCACTaGTACAACCTGCCATCCACA +
Preference number: 3 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSGQQSH*YNLPST
Trigger: TGTGGATGGCAGGTTGTACAAGTGACTTTGTTGCCC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR CAA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGATGCAGGACTCCGGTaGCAACAGAAACACCTGAGT +
Preference number: 3 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMDAGLR*QQKHLS
Trigger: ACTCAGGTGTTTCTGTTGCAACCGGAGTCCTGCATC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR-3UTR CAA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 3 (lower is better)
Translates to: RVDLSPVRACERSIAIDKEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 3 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 3 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 3 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSARGEIQ*ALECLV
Trigger: AACAAGACACTCCAAAGCCAACTGGATTTCTCCCCT...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR-3UTR CAA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCCCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 3 (lower is better)
Translates to: SSESIRVDLSPVRACERSPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 3 (lower is better)
Translates to: TSYWATEENGVVVSILLLVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: ISDRYHSASLKATQAASEVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGACAGCCCAAAAATTCTTaGACCAAAGAAGGGAGTTGG +
Preference number: 3 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRQPKNS*TKEGSW
Trigger: CCAACTCCCTTCTTTGGTCAAAGAATTTTTGGGCTG...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR TCA 72 bp TCTGAGGGTCAGCTGGCCTGGGATGGAGACCGAGTTTaGTATATAAATCAGACTTGCTTGGAAGTGCTTATC +
Preference number: 3 (lower is better)
Translates to: SEGQLAWDGDRV*YINQTCLEVLI
Trigger: GATAAGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCCAGCTGACCCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR TCA 72 bp GTCAGACGCGTTTTCTTGGGCTGCCTCTTCGGCTTTTaGGACCTTTCTGTAGCAATATATCATCTCGATGAG +
Preference number: 3 (lower is better)
Translates to: VRRVFLGCLFGF*DLSVAIYHLDE
Trigger: CTCATCGAGATGATATATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 3 (lower is better)
Translates to: NISLRCTLLLEDISESQIALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 3 (lower is better)
Translates to: SSESIRVDLSPVRACERSEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCCAAGTCTCCTGTCCTaGTCTTCTTGGAGGGAACCT +
Preference number: 3 (lower is better)
Translates to: NISLRCTLLLEDISESQIPSLLS*SSWREP
Trigger: AGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 3 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGCCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 3 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CAA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 3 (lower is better)
Translates to: SSESIRVDLSPVRACERSVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTTGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 3 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGGACTCTCAAAGCACATaGCTAGCATCCACCAAAAAG +
Preference number: 3 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWDSQST*LASTKK
Trigger: CTTTTTGGTGGATGCTAGCAATGTGCTTTGAGAGTC...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR-3UTR CAA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGATTAAAGTCACTTCAGTaGTGGGCAACAAAGTCACTT +
Preference number: 3 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGLKSLQ*WATKSL
Trigger: AAGTGACTTTGTTGCCCACAACTGAAGTGACTTTAA...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR CCA 72 bp CTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTaGAAAAATTTCACACTGAGGCCAATTTTTCTAACT +
Preference number: 3 (lower is better)
Translates to: LPQAGGIHELWD*KNFTLRPIFLT
Trigger: AGTTAGAAAAATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CCA 72 bp TTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATaGGACTGGAAAAATTTCACACTGAGGCCAATTTTT +
Preference number: 3 (lower is better)
Translates to: LLLPQAGGIHEL*DWKNFTLRPIF
Trigger: AAAAATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 3 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSLVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 3 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 72 bp AGACAGGGAGGTGGGTGGAGATTGGAAGTAGGCTGGTaGTCACAGTACCTTATTGATTTACAGTCATTATCA +
Preference number: 3 (lower is better)
Translates to: RQGGGWRLEVGW*SQYLIDLQSLS
Trigger: TGATAATGACTGTAAATCAATAAGGTACTGTGATCACCAGCCTACTTCCAATCTCCACCCACCTCCCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR TCA 72 bp AGATGCAGTGACACAGCCTTTTCCCTCAGATTTATGTaGGGAGGACTCACAGATTCTGAGATGGATGGAATT +
Preference number: 3 (lower is better)
Translates to: RCSDTAFSLRFM*GGLTDSEMDGI
Trigger: AATTCCATCCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGTCACTGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
3UTR TCA 72 bp GACACTCAGGTCAAAGCAGTTCACCTTCCGAAGCGCTaGCATCATACAGAGCTTTCTGACTTAAAGAATTAC +
Preference number: 3 (lower is better)
Translates to: DTQVKAVHLPKR*HHTELSDLKNY
Trigger: GTAATTCTTTAAGTCAGAAAGCTCTGTATGATGTCAGCGCTTCGGAAGGTGAACTGCTTTGACCTGAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
3UTR-3UTR CAA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 3 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 3 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGTGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 3 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR-3UTR CAA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTAGATGCACTCTCCTTTaGGAGGATATTTCAGAGTCA +
Preference number: 3 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIRCTLL*EDISES
Trigger: TGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCT...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 72 bp TTTACTGAAAAACAGCACATACAGGCATTACGTTGTTaGGGGCTTAGGTGGTCAGGAACATTTCCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: FTEKQHIQALRC*GLRWSGTFPEF
Trigger: AAACTCTGGAAATGTTCCTGACCACCTAAGCCCTCAACAACGTAATGCCTGTATGTGCTGTTTTTCAGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR CCA 72 bp AAACAAACAAAAACATCCATCCCAGGAAGTGTAAACTaGGCAGCACCTAAGGCTTATTTCTGCTCCAGTTTA +
Preference number: 3 (lower is better)
Translates to: KQTKTSIPGSVN*AAPKAYFCSSL
Trigger: TAAACTGGAGCAGAAATAAGCCTTAGGTGCTGCCCAGTTTACACTTCCTGGGATGGATGTTTTTGTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 72 bp CCCTGTATGAGTCTTAGTTGCCTCCTGTATGTAAAATaGGGAATAATACTGGTGCACAGAAATTTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: PCMSLSCLLYVK*GIILVHRNFER
Trigger: CCTCTCAAAATTTCTGTGCACCAGTATTATTCCTCATTTTACATACAGGAGGCAACTAAGACTCATACAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR TCA 72 bp ATGTCTCTTTCTCCTTTGTTCATTCACTCTGAGGACTaGATCTCCGCTTCATTATTTTTATCACAACGACAT +
Preference number: 3 (lower is better)
Translates to: MSLSPLFIHSED*ISASLFLSQRH
Trigger: ATGTCGTTGTGATAAAAATAATGAAGCGGAGATTCAGTCCTCAGAGTGAATGAACAAAGGAGAAAGAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR TCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGCACTGCAGGCGCCCCTaGAAGGGGCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVHCRRP*KGLSTS
Trigger: GGAGGTGGAGAGCCCCTTTCAGGGGCGCCTGCAGTG...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAGGGCCGAGCACCGGTaGCTGGGGAGGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKRAEHR*LGRPWE
Trigger: CTCCCAGGGCCTCCCCAGGCACCGGTGCTCGGCCCT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGCATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCTACAC +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLGIFWG*RLPRLH
Trigger: GTGTAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCC...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR TCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGAGCATTGCTGGCTCTaGGGGTCAGCTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQEHCWL*GSAGLG
Trigger: TCCCAGGCCAGCTGACCCTCAGAGCCAGCAATGCTC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGCCGGGGCCGCCCGTCTaGGCTACAGAATGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVPGPPV*ATECVP
Trigger: TGGAACGCATTCTGTAGCCCAGACGGGCGGCCCCGG...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGGTAGTCCCAGTTACCTaGGGGCTGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLVVPVT*GLRWED
Trigger: ATCCTCCCACCTCAGCCCCCAGGTAACTGGGACTAC...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR CAA 72 bp AAGCGATGGGGCCCTTGGGGCGCCCTCCTGATGCCATaGACATTGCTGAACATGGGATGTCCAGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KRWGPWGALLMP*TLLNMGCPVPQ
Trigger: CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTATTCTCCAGCTGGGCGTaGCCCCACTCCCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVFSSWA*PHSRSR
Trigger: GCGGCTTCGGGAGTGGGGTCACGCCCAGCTGGAGAA...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR TCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCACTGCAGGCGCCCCTaGAAGGGGCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETHCRRP*KGLSTS
Trigger: GGAGGTGGAGAGCCCCTTTCAGGGGCGCCTGCAGTG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGGAGCATTGCTGGCTCTaGGGGTCAGCTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVEHCWL*GSAGLG
Trigger: TCCCAGGCCAGCTGACCCTCAGAGCCAGCAATGCTC...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCAGCCCCGCGGCTCCTaGTTCGTCCGCCCTAACTGC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETQPRGS*FVRPNC
Trigger: GCAGTTAGGGCGGACGAAGCAGGAGCCGCGGGGCTG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR GCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGCCTCCTCTCTCTTCATaGAGGAGATGCAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLPPLSS*RRCSAA
Trigger: AGCTGCGCTGCATCTCCTGCATGAAGAGAGAGGAGG...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCGGTTGCGTTCCGACTaGAATCCTCCCAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNRLRSD*NPPSPA
Trigger: CGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAAGCGATGGGGCCCTTaGGGCGCCCTCCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAKRWGP*GALLMP
Trigger: TGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGACATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGCCGGGTGGGGGCTTTaGGCCCTAAGCGACCCCACT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKAGWGL*ALSDPT
Trigger: AGTGGGGTCGCTTAGGGCCCAAAGCCCCCACCCGGC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGGCCCTGGGAGCTTTTaGAGCCGGGTGGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGGPGSF*SRVGAL
Trigger: CAAAGCCCCCACCCGGCTCCAAAAGCTCCCAGGGCC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR TCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTATTCTCCAGCTGGGCGTaGCCCCACTCCCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLFSSWA*PHSRSR
Trigger: GCGGCTTCGGGAGTGGGGTCACGCCCAGCTGGAGAA...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR TCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGACACTGCAGGCGCCCCTaGAAGGGGCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGHCRRP*KGLSTS
Trigger: GGAGGTGGAGAGCCCCTTTCAGGGGCGCCTGCAGTG...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR TCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGCACTGCAGGCGCCCCTaGAAGGGGCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKHCRRP*KGLSTS
Trigger: GGAGGTGGAGAGCCCCTTTCAGGGGCGCCTGCAGTG...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGCTCCAGCCTCCTCGGTaGCTCTTAGGGGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVLQPPR*LLGGSA
Trigger: GGCTGATCCCCCTAAGAGTCACCGAGGAGGCTGGAG...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGACTCCAGCCTCCTCGGTaGCTCTTAGGGGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGLQPPR*LLGGSA
Trigger: GGCTGATCCCCCTAAGAGTCACCGAGGAGGCTGGAG...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETGRSQV*GTSLSL
Trigger: CAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp CACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTGGTACCGCAGAGTTCTGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HLMSHCSCSIPPLVPQSSGRSQV*GTSLSL
Trigger: CAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCC...AGAACTCTGCGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGTTTGGGTTGGGGCTCTaGTTCAAGACCGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLFGLGL*FKTEVT
Trigger: TGTCACCTCGGTCTTGAATCAGAGCCCCAACCCAAA...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGCTCTTGCCAAGCCGTaGCGCAGGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAALAKP*RREEAQ
Trigger: CTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGC...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACAGGGGGCGACTTTCTaGCCGAAGGAAGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVQGATF*PKEGPS
Trigger: GCTCGGCCCTTCCTTCGGTCAGAAAGTCGCCCCCTG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR GCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTTCATGGGGTTGCCCTaGACGGCCTCCGTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVFMGLP*TASVSE
Trigger: CTCGGAGACGGAGGCCGTGCAGGGCAACCCCATGAA...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTTCATGGGGTTGCCCTaGACGGCCTCCGTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAFMGLP*TASVSE
Trigger: CTCGGAGACGGAGGCCGTGCAGGGCAACCCCATGAA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGCAGCTTCATGGGGTTaGCCTGCACGGCCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAAASWG*PARPPS
Trigger: AGACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGC...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGCAGCTTCATGGGGTTaGCCTGCACGGCCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVAASWG*PARPPS
Trigger: AGACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCCTGCAGGTCCTTGCTaGCATTCCACTGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAPAGPC*HSTAGA
Trigger: GGCGCCTGCAGTGGAATGGCAGCAAGGACCTGCAGG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGGCAGTTCACAAGCCTaGAAGCACTCGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQGSSQA*KHSAFS
Trigger: GCTGAAGGCCGAGTGCTTGCAGGCTTGTGAACTGCC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGGCCCCGACCCTGGGTaGCAGGTGATCAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKGPDPG*QVISNP
Trigger: AGGGTTGCTGATCACCTGCCACCCAGGGTCGGGGCC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGGCGATGTCAGAGGTTaGGGGGTGGGTGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNGDVRG*GVGVEA
Trigger: CGCCTCTACACCCACCCCCCAACCTCTGACATCGCC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACCGGGGCCGCCCGTCTaGGCTACAGAATGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKPGPPV*ATECVP
Trigger: TGGAACGCATTCTGTAGCCCAGACGGGCGGCCCCGG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATCGGTTGCGTTCCGACTaGAATCCTCCCAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHRLRSD*NPPSPA
Trigger: CGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCG...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000667790.1
CDS-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACGGTTGCGTTCCGACTaGAATCCTCCCAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVRLRSD*NPPSPA
Trigger: CGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNGIFWG*RLPRLS
Trigger: CGAGAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGATTCCACCACCGTGGTaGCCTCCACCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQIPPPW*PPPPLS
Trigger: AGAGAGAGGAGGTGGAGGCCACCACGGTGGTGGAAT...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGGGAAGTCTGGGTGTGTaGGTGTCTGGGAATGGAGAA +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLGSLGV*VSGNGE
Trigger: TTCTCCATTCCCAGACACCCACACACCCAGACTTCC...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGCCGTACGCGGTTCCTaGCTTCGCCTCCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIAVRGS*LRLPDP
Trigger: GGGGTCTGGGAGGCGAAGCCAGGAACCGCGTACGGC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657191.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKGIFWG*RLPRRV
Trigger: CACCCGCCTTGGAAGCCGCCAGCCCCAGAAGATGCC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657191.1
CDS-3UTR TCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGGGGGAAACAATCTATTaGAGGCAGGCATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLGETIY*RQASSG
Trigger: CCCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCC...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGCCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHGRSQV*GTSLSL
Trigger: CAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGCAGTTGAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQQLRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTCAACTG...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGCACCTCATCACTCAGTaGGGTGATCCAAATGTCAGC +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLHLITQ*GDPNVS
Trigger: GCTGACATTTGGATCACCTCACTGAGTGATGAGGTG...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657123.1
CDS-3UTR GCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATTTCATGGGGTTGCCCTaGACGGCCTCCGTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHFMGLP*TASVSE
Trigger: CTCGGAGACGGAGGCCGTGCAGGGCAACCCCATGAA...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGCAGCTTCATGGGGTTaGCCTGCACGGCCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWAASWG*PARPPS
Trigger: AGACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGC...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGATGGACACGTCCTaGAGGTCCTTGCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQVMDTS*RSLLPF
Trigger: GAATGGCAGCAAGGACCTGCAGGACGTGTCCATCAC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGCGGGGCCCCGACCCTaGGTGGCAGGTGATCAGCAA +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLAGPRP*VAGDQQ
Trigger: TTGCTGATCACCTGCCACCCAGGGTCGGGGCCCCGC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATGGCGATGTCAGAGGTTaGGGGGTGGGTGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHGDVRG*GVGVEA
Trigger: CGCCTCTACACCCACCCCCCAACCTCTGACATCGCC...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000667790.1
CDS-3UTR CCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTCCGGGGCCGCCCGTCTaGGCTACAGAATGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIPGPPV*ATECVP
Trigger: TGGAACGCATTCTGTAGCCCAGACGGGCGGCCCCGG...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACCGGTTGCGTTCCGACTaGAATCCTCCCAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHRLRSD*NPPSPA
Trigger: CGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCG...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAKAGIF*GWRLPR
Trigger: CCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAATGCAGCGCAGCTTCATaGGGTTGCCCTGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKCSAAS*GCPARP
Trigger: AGGCCGTGCAGGGCAACCCCATGAAGCTGCGCTGCA...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACACCATTCCACCACCGTaGTGGCCTCCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNTIPPP*WPPPPL
Trigger: GAGAGGAGGTGGAGGCCACCACGGTGGTGGAATGGT...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGGGCTCTCCACCTCCTaGTGGCCATTCCGATACTCG +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNGLSTS*WPFRYS
Trigger: CGAGTATCGGAATGGCCACCAGGAGGTGGAGAGCCC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGCCCCTCTCTTGTCCCTaGGTGCTGAAGGATGTCACA +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQPLSCP*VLKDVT
Trigger: TGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGG...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAAGGGAGTCGCACTGCTaGCCTAGCAGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVRESHC*PSSQAV
Trigger: CACAGCCTGGCTGCTAGGCCAGCAGTGCGACTCCCT...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR TCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTTTCTCCAGCTGGGCGTaGCCCCACTCCCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAFSSWA*PHSRSR
Trigger: GCGGCTTCGGGAGTGGGGTCACGCCCAGCTGGAGAA...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299333.8
ENST00000392770.6
CDS-3UTR TCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTTTCTCCAGCTGGGCGTaGCCCCACTCCCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFFSSWA*PHSRSR
Trigger: GCGGCTTCGGGAGTGGGGTCACGCCCAGCTGGAGAA...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR TCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVRRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRGRSQV*GTSLSL
Trigger: CAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCC...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGGTAGAGAAGCAGTaGGTGGGATTAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQVVEKQ*VGLGVR
Trigger: TCTCACCCCTAATCCCACTCACTGCTTCTCTACCAC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGGCTCTTGCCAAGCCGTaGCGCAGGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKALAKP*RREEAQ
Trigger: CTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGC...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGTCTGGGCTACAGAATaGGTTCCACGTCGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNVWATE*VPRRSR
Trigger: ACGGGACCGACGTGGAACGCATTCTGTAGCCCAGAC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR GCA 90 bp CCTGTTCTATTCCTCCACTGGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGATGCAGCTTCATGGGGTTaGCCTGCACGGCCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: PVLFLHWYRRVLLVLRWDAASWG*PARPPS
Trigger: AGACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGC...ATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR GCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGACCTGCAGGTCCTTGCTaGCATTCCACTGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGPAGPC*HSTAGA
Trigger: GGCGCCTGCAGTGGAATGGCAGCAAGGACCTGCAGG...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACGTCCTGCAGGTCCTTaGTGCCATTCCACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVRPAGP*CHSTAG
Trigger: GCCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTGGTACCGCAGAGTTCTCGTCCTGCAGGTCCTTaGTGCCATTCCACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: HLMSHCSCSIPPLVPQSSRPAGP*CHSTAG
Trigger: GCCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACG...AGAACTCTGCGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR GCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGGCAGTTCACAAGCCTaGAAGCACTCGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVGSSQA*KHSAFS
Trigger: GCTGAAGGCCGAGTGCTTGCAGGCTTGTGAACTGCC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCCTGCCATCCACATCTaGCTTCCCCTCCCATGTTCC +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAPAIHI*LPLPCS
Trigger: GGAACATGGGAGGGGAAGGCAGATGTGGATGGCAGG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR GCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATGGCAATGATGTCATCTaGAAGGCGCGCCGTACGCGG +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHGNDVI*KARRTR
Trigger: CCGCGTACGGCGCGCCTTGCAGATGACATCATTGCC...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657191.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGGCCCCGACCCTGGGTaGCAGGTGATCAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIGPDPG*QVISNP
Trigger: AGGGTTGCTGATCACCTGCCACCCAGGGTCGGGGCC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGCGGGGCCCCGACCCTaGGTGGCAGGTGATCAGCAA +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEAGPRP*VAGDQQ
Trigger: TTGCTGATCACCTGCCACCCAGGGTCGGGGCCCCGC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp ATGGGCAAGTTCAGATTGCCTCGACACTCAGGTCAAAGCAGTTCACCTTCCGAAGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: MGKFRLPRHSGQSSSPSEGIFWG*RLPRLS
Trigger: CGAGAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCC...TTCGGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETKAGIF*GWRLPR
Trigger: CCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGATGCAGCGCAGCTTCATaGGGTTGCCCTGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGCSAAS*GCPARP
Trigger: AGGCCGTGCAGGGCAACCCCATGAAGCTGCGCTGCA...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACTGCAGCGCAGCTTCATaGGGTTGCCCTGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHCSAAS*GCPARP
Trigger: AGGCCGTGCAGGGCAACCCCATGAAGCTGCGCTGCA...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGGGCTCTCCACCTCCTaGTGGCCATTCCGATACTCG +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETGLSTS*WPFRYS
Trigger: CGAGTATCGGAATGGCCACCAGGAGGTGGAGAGCCC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTAAGCGATGGGGCCCTTaGGGCGCCCTCCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIKRWGP*GALLMP
Trigger: TGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GATCTTTTCCTTCATGCCCCACACTTTGGCCTGCTCACTAGCAGTGATAATGCTAAGCGATGGGGCCCTTaGGGCGCCCTCCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: DLFLHAPHFGLLTSSDNAKRWGP*GALLMP
Trigger: TGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT...AGCATTATCACTGCTAGTGAGCAGGCCAAAGTGTGGGGCATGAAGGAAAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTCATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGTGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQCNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGTAGTCCCAGTTACCTaGGGGCTGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGVVPVT*GLRWED
Trigger: ATCCTCCCACCTCAGCCCCCAGGTAACTGGGACTAC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVGIFWG*RLPRLF
Trigger: GAACAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCC...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657123.1
CDS-3UTR TCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCACTGCAGGCGCCCCTaGAAGGGGCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSHCRRP*KGLSTS
Trigger: GGAGGTGGAGAGCCCCTTTCAGGGGCGCCTGCAGTG...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGGTACATCATGATTTCTaGGACCACAGAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLVHHDF*DHRGEV
Trigger: GACTTCACCTCTGTGGTCTCAGAAATCATGATGTAC...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQARRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGGAGAGGCCGAGGCATaGGAATTGCTTGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVGEAEA*ELLEPK
Trigger: CTTGGGTTCAAGCAATTCTCATGCCTCGGCCTCTCC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGCCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGACAGTTGAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGQLRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTCAACTG...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQSWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGCCTGCAAAGATGCAGTaGCACAGCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVPAKMQ*HSLFPQ
Trigger: CTGAGGGAAAAGGCTGTGTCACTGCATCTTTGCAGG...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGAGCATTGCTGGCTCTaGGGGTCAGCTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSEHCWL*GSAGLG
Trigger: TCCCAGGCCAGCTGACCCTCAGAGCCAGCAATGCTC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGCAGGCATTACGTTGTTaGGGGCTTAGGTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVQALRC*GLRWSG
Trigger: TCCTGACCACCTAAGCCCTCAACAACGTAATGCCTG...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTATGGAAGGGTCCAGGTTaGTTCACCTCTCGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLWKGPG*FTSRLP
Trigger: GGGGAGGCGAGAGGTGAATCAACCTGGACCCTTCCA...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR GCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACTCCCCAGGATCGGTTaGGTTCCGACTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKLPRIG*VPTGIL
Trigger: GAGGATTCCAGTCGGAACGCAACCGATCCTGGGGAG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR GCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTCTTCATGCAGGAGATaGAGCGCAGCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVSSCRR*SAASWG
Trigger: ACCCCATGAAGCTGCGCTGCATCTCCTGCATGAAGA...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGCCTCCTCTCTCTTCATaGAGGAGATGCAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVPPLSS*RRCSAA
Trigger: AGCTGCGCTGCATCTCCTGCATGAAGAGAGAGGAGG...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGCGTCCTGCAGGTCCTTaGTGCCATTCCACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWRPAGP*CHSTAG
Trigger: GCCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACG...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGCGTCCTGCAGGTCCTTaGTGCCATTCCACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKRPAGP*CHSTAG
Trigger: GCCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACG...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACACTCCCGGGACACATTaGAGGTGTAGAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNTPGTH*RCRGQS
Trigger: ACTCTGGCCTCTACACCTGCAATGTGTCCCGGGAGT...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGTTCACAAAGGGCCGATaGGCCTCAAACTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQFTKGR*ASNSNS
Trigger: GGAGTTTGAGTTTGAGGCGCATCGGCCCTTTGTGAA...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACA +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGNAQVV*PQGGHT
Trigger: TGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGAGAGAGGAGGGAGTTaGTGTCTCCTACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNERGGS*CLLLPS
Trigger: GCTGGGAAGTAGGAGACAGCAACTCCCTCCTCTCTC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGAGCAGAGGCAGCTCTTaGCAAGCCGTGACGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKSRGSS*QAVTQG
Trigger: TCCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCT...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACAGCAGAGGCAGCTCTTaGCAAGCCGTGACGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHSRGSS*QAVTQG
Trigger: TCCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCT...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCCCTCGGTCAAGGACTaGGCCCTCTCAGATTCTTTC +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAPSVKD*ALSDSF
Trigger: GAAAGAATCTGAGAGGGCGCAGTCCTTGACCGAGGG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSGIFWG*RLPRLS
Trigger: CGAGAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTCCACCACCGTGGTaGCCTCCACCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKIPPPW*PPPPLS
Trigger: AGAGAGAGGAGGTGGAGGCCACCACGGTGGTGGAAT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATATTCCACCACCGTGGTaGCCTCCACCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHIPPPW*PPPPLS
Trigger: AGAGAGAGGAGGTGGAGGCCACCACGGTGGTGGAAT...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAACCATTCCACCACCGTaGTGGCCTCCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLTIPPP*WPPPPL
Trigger: GAGAGGAGGTGGAGGCCACCACGGTGGTGGAATGGT...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAACCATTCCACCACCGTaGTGGCCTCCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGTIPPP*WPPPPL
Trigger: GAGAGGAGGTGGAGGCCACCACGGTGGTGGAATGGT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGGGCTCTCCACCTCCTaGTGGCCATTCCGATACTCG +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWGLSTS*WPFRYS
Trigger: CGAGTATCGGAATGGCCACCAGGAGGTGGAGAGCCC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGGGCTCTCCACCTCCTaGTGGCCATTCCGATACTCG +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGGLSTS*WPFRYS
Trigger: CGAGTATCGGAATGGCCACCAGGAGGTGGAGAGCCC...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGCATGAAGGGAAGCGATaGGGCCCTTGGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEHEGKR*GPWGAL
Trigger: GAGGGCGCCCCAAGGGCCCCATCGCTTCCCTTCATG...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTACCTGGGGGCTGAGGTaGGAGGATTGCTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQATWGLR*EDCLNL
Trigger: CAGGTTTAAGCAATCCTCCCACCTCAGCCCCCAGGT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGTAGTCCCAGTTACCTaGGGGCTGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKVVPVT*GLRWED
Trigger: ATCCTCCCACCTCAGCCCCCAGGTAACTGGGACTAC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGCCGGTGGTGGAGGGTaGTATTCCCTCCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLAGGGG*YSLLGD
Trigger: GTCACCGAGGAGGGAATACCACCCTCCACCACCGGC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659826.1
CDS-3UTR TCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTCACTGCAGGCGCCCCTaGAAGGGGCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSHCRRP*KGLSTS
Trigger: GGAGGTGGAGAGCCCCTTTCAGGGGCGCCTGCAGTG...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR TCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTCCAGCCTCCTCGGTaGCTCTTAGGGGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFLQPPR*LLGGSA
Trigger: GGCTGATCCCCCTAAGAGTCACCGAGGAGGCTGGAG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVRRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGGAGAGGCCGAGGCATaGGAATTGCTTGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWGEAEA*ELLEPK
Trigger: CTTGGGTTCAAGCAATTCTCATGCCTCGGCCTCTCC...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp CACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTGGTACCGCAGAGTTCTGGAGAGGCCGAGGCATaGGAATTGCTTGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: HLMSHCSCSIPPLVPQSSGEAEA*ELLEPK
Trigger: CTTGGGTTCAAGCAATTCTCATGCCTCGGCCTCTCC...AGAACTCTGCGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACAGTTGAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKQLRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTCAACTG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGTGGTAGAGAAGCAGTaGGTGGGATTAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNVVEKQ*VGLGVR
Trigger: TCTCACCCCTAATCCCACTCACTGCTTCTCTACCAC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGAGTAGAATGAGTGGATaGTCAGACTGGCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQSRMSG*SDWQAH
Trigger: GTGTGCTTGCCAGTCTGATCATCCACTCATTCTACT...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGTGCTTTTCAGACCTGTaGCTGCATGGCACACTAAAG +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQCFSDL*LHGTLK
Trigger: CTTTAGTGTGCCATGCAGTCACAGGTCTGAAAAGCA...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGGCTCTTGCCAAGCCGTaGCGCAGGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWALAKP*RREEAQ
Trigger: CTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGC...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCAGGCATTACGTTGTTaGGGGCTTAGGTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNQALRC*GLRWSG
Trigger: TCCTGACCACCTAAGCCCTCAACAACGTAATGCCTG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCAGGCATTACGTTGTTaGGGGCTTAGGTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAQALRC*GLRWSG
Trigger: TCCTGACCACCTAAGCCCTCAACAACGTAATGCCTG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGTATTCCCTCCTCGGTaGCTCTTAGGGGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGVFPPR*LLGGSA
Trigger: GGCTGATCCCCCTAAGAGTCACCGAGGAGGGAATAC...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659826.1
CDS-3UTR GCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGTCTGGGCTACAGAATaGGTTCCACGTCGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIVWATE*VPRRSR
Trigger: ACGGGACCGACGTGGAACGCATTCTGTAGCCCAGAC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR GCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGTCTGGGCTACAGAATaGGTTCCACGTCGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHVWATE*VPRRSR
Trigger: ACGGGACCGACGTGGAACGCATTCTGTAGCCCAGAC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR GCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACCTCCCCAGGATCGGTTaGGTTCCGACTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHLPRIG*VPTGIL
Trigger: GAGGATTCCAGTCGGAACGCAACCGATCCTGGGGAG...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR GCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTCTCCCCAGGATCGGTTaGGTTCCGACTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLILPRIG*VPTGIL
Trigger: GAGGATTCCAGTCGGAACGCAACCGATCCTGGGGAG...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR GCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGTTCATGGGGTTGCCCTaGACGGCCTCCGTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEFMGLP*TASVSE
Trigger: CTCGGAGACGGAGGCCGTGCAGGGCAACCCCATGAA...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGCAGCTTCATGGGGTTaGCCTGCACGGCCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSAASWG*PARPPS
Trigger: AGACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGATCTTCATGCAGGAGATaGAGCGCAGCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGSSCRR*SAASWG
Trigger: ACCCCATGAAGCTGCGCTGCATCTCCTGCATGAAGA...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACCTCCTCTCTCTTCATaGAGGAGATGCAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKPPLSS*RRCSAA
Trigger: AGCTGCGCTGCATCTCCTGCATGAAGAGAGAGGAGG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCACCTGCAGGTCCTTGCTaGCATTCCACTGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSPAGPC*HSTAGA
Trigger: GGCGCCTGCAGTGGAATGGCAGCAAGGACCTGCAGG...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATGTGATGGACACGTCCTaGAGGTCCTTGCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHVMDTS*RSLLPF
Trigger: GAATGGCAGCAAGGACCTGCAGGACGTGTCCATCAC...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGTGATGGACACGTCCTaGAGGTCCTTGCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETVMDTS*RSLLPF
Trigger: GAATGGCAGCAAGGACCTGCAGGACGTGTCCATCAC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCTGAGGTGGGAGGATTaGTTAAACCTGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNLRWED*LNLGQL
Trigger: CAACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGAGAGAGGAGGGAGTTaGTGTCTCCTACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETERGGS*CLLLPS
Trigger: GCTGGGAAGTAGGAGACAGCAACTCCCTCCTCTCTC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGAGACTTGCTTGGAAGTaGTTATCTCCTGCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVRLAWK*LSPASC
Trigger: GCAGGACGCAGGAGATAAGCACTTCCAAGCAAGTCT...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGGCAGTTCACAAGCCTaGAAGCACTCGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIGSSQA*KHSAFS
Trigger: GCTGAAGGCCGAGTGCTTGCAGGCTTGTGAACTGCC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGGGCAGTTCACAAGCCTaGAAGCACTCGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKGSSQA*KHSAFS
Trigger: GCTGAAGGCCGAGTGCTTGCAGGCTTGTGAACTGCC...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTTGCAGCGCAGCTTCATaGGGTTGCCCTGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFCSAAS*GCPARP
Trigger: AGGCCGTGCAGGGCAACCCCATGAAGCTGCGCTGCA...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGATTCCACCACCGTGGTaGCCTCCACCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWIPPPW*PPPPLS
Trigger: AGAGAGAGGAGGTGGAGGCCACCACGGTGGTGGAAT...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAACCATTCCACCACCGTaGTGGCCTCCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRTIPPP*WPPPPL
Trigger: GAGAGGAGGTGGAGGCCACCACGGTGGTGGAATGGT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQVLFLH*YRRVLL
Trigger: AAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAAC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQACNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTTTGGGAGGCTGAGGTaGGTGGGTCATTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAFGRLR*VGHLRS
Trigger: TGACCTCAAATGACCCACCCACCTCAGCCTCCCAAA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAACCTGGGGGCTGAGGTaGGAGGATTGCTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKTWGLR*EDCLNL
Trigger: CAGGTTTAAGCAATCCTCCCACCTCAGCCCCCAGGT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGTAGTCCCAGTTACCTaGGGGCTGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWVVPVT*GLRWED
Trigger: ATCCTCCCACCTCAGCCCCCAGGTAACTGGGACTAC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGTAGTCCCAGTTACCTaGGGGCTGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHVVPVT*GLRWED
Trigger: ATCCTCCCACCTCAGCCCCCAGGTAACTGGGACTAC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTAACGGTCTGGTTTTaGGCCAGGCACAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVLTVWF*ARHSCS
Trigger: TGAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAA...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATAGACAGGGAGGTGGGTaGAGATTGGAAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHRQGGG*RLEVGW
Trigger: CCAGCCTACTTCCAATCTCCACCCACCTCCCTGTCT...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCAGGCAGGGAGTGTTTaGGTTGGGGCTCTGATTCAA +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNQAGSV*VGALIQ
Trigger: TTGAATCAGAGCCCCAACCCAAACACTCCCTGCCTG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGGTGAGAATAAAGGCTaGGGTAGGGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETGENKG*GRDRQG
Trigger: TCCCTGCCTGTCCCTACCCCAGCCTTTATTCTCACC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGGAAGTCTGGGTGTGTaGGTGTCTGGGAATGGAGAA +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNGSLGV*VSGNGE
Trigger: TTCTCCATTCCCAGACACCCACACACCCAGACTTCC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTCCTAAGCGACCCCACTaGACCTCCCCAGTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAPKRPH*TSPVRG
Trigger: CCCTCGAACTGGGGAGGTCCAGTGGGGTCGCTTAGG...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR TCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCTCCAGCCTCCTCGGTaGCTCTTAGGGGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSLQPPR*LLGGSA
Trigger: GGCTGATCCCCCTAAGAGTCACCGAGGAGGCTGGAG...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAGAACAATGGATGCATaGAGGGAAGCGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIRTMDA*REAMGP
Trigger: GGGCCCCATCGCTTCCCTTCATGCATCCATTGTTCT...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGGAGAGGCCGAGGCATaGGAATTGCTTGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIGEAEA*ELLEPK
Trigger: CTTGGGTTCAAGCAATTCTCATGCCTCGGCCTCTCC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGCTTGTCCCTGGGTGCTaGAGGATGTCACACTTGGAC +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWLVPGC*RMSHLD
Trigger: GTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAG...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIGRSQV*GTSLSL
Trigger: CAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCC...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTGGGAGGTCCCAGGTCTaGGGGACCTCTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSGRSQV*GTSLSL
Trigger: CAGCGAGAGAGAGGTCCCTCAGACCTGGGACCTCCC...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVSWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGSWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGTGGTAGAGAAGCAGTaGGTGGGATTAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKVVEKQ*VGLGVR
Trigger: TCTCACCCCTAATCCCACTCACTGCTTCTCTACCAC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGAGTAGAATGAGTGGATaGTCAGACTGGCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVSRMSG*SDWQAH
Trigger: GTGTGCTTGCCAGTCTGATCATCCACTCATTCTACT...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTGAGCATTGCTGGCTCTaGGGGTCAGCTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVEHCWL*GSAGLG
Trigger: TCCCAGGCCAGCTGACCCTCAGAGCCAGCAATGCTC...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTTCATGGGGTTGCCCTaGACGGCCTCCGTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSFMGLP*TASVSE
Trigger: CTCGGAGACGGAGGCCGTGCAGGGCAACCCCATGAA...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTCTTCATGCAGGAGATaGAGCGCAGCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWSSCRR*SAASWG
Trigger: ACCCCATGAAGCTGCGCTGCATCTCCTGCATGAAGA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTCCTCCTCTCTCTTCATaGAGGAGATGCAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIPPLSS*RRCSAA
Trigger: AGCTGCGCTGCATCTCCTGCATGAAGAGAGAGGAGG...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGCCTGCAGGTCCTTGCTaGCATTCCACTGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMPAGPC*HSTAGA
Trigger: GGCGCCTGCAGTGGAATGGCAGCAAGGACCTGCAGG...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCACGTCCTGCAGGTCCTTaGTGCCATTCCACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSRPAGP*CHSTAG
Trigger: GCCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACG...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGGTGATGGACACGTCCTaGAGGTCCTTGCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKVMDTS*RSLLPF
Trigger: GAATGGCAGCAAGGACCTGCAGGACGTGTCCATCAC...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTCCCGGGACACATTaGAGGTGTAGAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHTPGTH*RCRGQS
Trigger: ACTCTGGCCTCTACACCTGCAATGTGTCCCGGGAGT...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACA +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLENAQVV*PQGGHT
Trigger: TGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCTGAGGTGGGAGGATTaGTTAAACCTGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETLRWED*LNLGQL
Trigger: CAACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACTGAGGTGGGAGGATTaGTTAAACCTGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVLRWED*LNLGQL
Trigger: CAACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGGAGAGAGGAGGGAGTTaGTGTCTCCTACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKERGGS*CLLLPS
Trigger: GCTGGGAAGTAGGAGACAGCAACTCCCTCCTCTCTC...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGAGAGAGGAGGGAGTTaGTGTCTCCTACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGERGGS*CLLLPS
Trigger: GCTGGGAAGTAGGAGACAGCAACTCCCTCCTCTCTC...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGTTCTTCCTGCAAAGATaGAGTGACACAGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQFFLQR*SDTAFS
Trigger: GGAAAAGGCTGTGTCACTGCATCTTTGCAGGAAGAA...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGCTTCTCTTTCTTCCTaGAAAGATGCAGTGACACAG +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQASLSS*KDAVTQ
Trigger: CTGTGTCACTGCATCTTTGCAGGAAGAAAGAGAAGC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGAGCAGAGGCAGCTCTTaGCAAGCCGTGACGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWSRGSS*QAVTQG
Trigger: TCCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCT...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTCCTGCCTCGCTCGTTTaGGCCCAGGGTAAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVPASLV*AQGKLS
Trigger: GCTGAGCTTACCCTGGGCGCAAACGAGCGAGGCAGG...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR GCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTTTCCACTCGCGCCCCTaGCTCGCTCGTTTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIFHSRP*LARLRP
Trigger: TGGGCGCAAACGAGCGAGGCAGGGGCGCGAGTGGAA...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR GCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTGGGCAAGTTCAGATTaGCTCGACACTCAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVWASSD*LDTQVK
Trigger: TTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCA...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGGCGATGTCAGAGGTTaGGGGGTGGGTGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMGDVRG*GVGVEA
Trigger: CGCCTCTACACCCACCCCCCAACCTCTGACATCGCC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFKAGIF*GWRLPR
Trigger: CCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTT...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGTGCAGCGCAGCTTCATaGGGTTGCCCTGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMCSAAS*GCPARP
Trigger: AGGCCGTGCAGGGCAACCCCATGAAGCTGCGCTGCA...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGGGCTCTCCACCTCCTaGTGGCCATTCCGATACTCG +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSGLSTS*WPFRYS
Trigger: CGAGTATCGGAATGGCCACCAGGAGGTGGAGAGCCC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACTGTTCTCAGATGGGATaGCAAGGTAGTCAGACGCGT +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNCSQMG*QGSQTR
Trigger: ACGCGTCTGACTACCTTGCCATCCCATCTGAGAACA...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVVLFLH*YRRVLL
Trigger: AAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAAC...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTAAGCGATGGGGCCCTTaGGGCGCCCTCCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSKRWGP*GALLMP
Trigger: TGGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTT...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVLASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTTTGGGAGGCTGAGGTaGGTGGGTCATTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWFGRLR*VGHLRS
Trigger: TGACCTCAAATGACCCACCCACCTCAGCCTCCCAAA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGCATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGCCCCTCTCTTGTCCCTaGGTGCTGAAGGATGTCACA +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWPLSCP*VLKDVT
Trigger: TGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGG...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCTGTTCTATTCCTCCACTGGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGATCCCCTCTCTTGTCCCTaGGTGCTGAAGGATGTCACA +
Preference number: 4 (lower is better)
Translates to: PVLFLHWYRRVLLVLRWDPLSCP*VLKDVT
Trigger: TGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGG...ATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAACCTGGGGGCTGAGGTaGGAGGATTGCTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGTWGLR*EDCLNL
Trigger: CAGGTTTAAGCAATCCTCCCACCTCAGCCCCCAGGT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGTAGTCCCAGTTACCTaGGGGCTGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIVVPVT*GLRWED
Trigger: ATCCTCCCACCTCAGCCCCCAGGTAACTGGGACTAC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGAATGTGTTAACGGTCTaGTTTTGGGCCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVNVLTV*FWARHS
Trigger: ACTGTGCCTGGCCCAAAACCAGACCGTTAACACATT...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAGACAGGGAGGTGGGTaGAGATTGGAAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIRQGGG*RLEVGW
Trigger: CCAGCCTACTTCCAATCTCCACCCACCTCCCTGTCT...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGAAGAGACAGGGAGGTaGGTGGAGATTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKEETGR*VEIGSR
Trigger: CCTACTTCCAATCTCCACCCACCTCCCTGTCTCTTC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATAGGGAGTGTTTGGGTTaGGGCTCTGATTCAAGACCG +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHRECLG*GSDSRP
Trigger: CGGTCTTGAATCAGAGCCCCAACCCAAACACTCCCT...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGGTGAGAATAAAGGCTaGGGTAGGGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHGENKG*GRDRQG
Trigger: TCCCTGCCTGTCCCTACCCCAGCCTTTATTCTCACC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGGAAGTCTGGGTGTGTaGGTGTCTGGGAATGGAGAA +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKGSLGV*VSGNGE
Trigger: TTCTCCATTCCCAGACACCCACACACCCAGACTTCC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGAACATTTCCAGAGTTTaGATTGTGTTCGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLNISRV*IVFDGS
Trigger: ACTGCCATCGAACACAATCCAAACTCTGGAAATGTT...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACCTTTTGAGCTGCCGGTaGTGGAGGGTGGTATTCCCT +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHLLSCR*WRVVFP
Trigger: AGGGAATACCACCCTCCACCACCGGCAGCTCAAAAG...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659826.1
CDS-3UTR TCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGGTACATCATGATTTCTaGGACCACAGAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVVHHDF*DHRGEV
Trigger: GACTTCACCTCTGTGGTCTCAGAAATCATGATGTAC...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAAGAACAATGGATGCATaGAGGGAAGCGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRRTMDA*REAMGP
Trigger: GGGCCCCATCGCTTCCCTTCATGCATCCATTGTTCT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGGCATGAGAATTGCTTaGACCCAAGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETGMRIA*TQEAEV
Trigger: AACCTCTGCCTCTTGGGTTCAAGCAATTCTCATGCC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTCTTGTCCCTGGGTGCTaGAGGATGTCACACTTGGAC +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPILVPGC*RMSHLD
Trigger: GTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAG...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGACTTGTCCCTGGGTGCTaGAGGATGTCACACTTGGAC +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRLVPGC*RMSHLD
Trigger: GTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAG...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETSWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGAGTGAATTGTGTTATTaGGGATCAGACATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLSELCY*GSDMGN
Trigger: ATTTCCCATGTCTGATCCTCAATAACACAATTCACT...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAGGGGAGGAAGTGGGCTaGACTAATCATGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRGEEVG*TNHELS
Trigger: GGACAGCTCATGATTAGTTCAGCCCACTTCCTCCCC...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGGGGAGGAAGTGGGCTaGACTAATCATGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIGEEVG*TNHELS
Trigger: GGACAGCTCATGATTAGTTCAGCCCACTTCCTCCCC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGTCTGGGCTACAGAATaGGTTCCACGTCGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEVWATE*VPRRSR
Trigger: ACGGGACCGACGTGGAACGCATTCTGTAGCCCAGAC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR GCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCCCTCCTCTCTCTTCATaGAGGAGATGCAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSPPLSS*RRCSAA
Trigger: AGCTGCGCTGCATCTCCTGCATGAAGAGAGAGGAGG...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTCCTGCAGGTCCTTGCTaGCATTCCACTGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIPAGPC*HSTAGA
Trigger: GGCGCCTGCAGTGGAATGGCAGCAAGGACCTGCAGG...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTACTCCCGGGACACATTaGAGGTGTAGAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLTPGTH*RCRGQS
Trigger: ACTCTGGCCTCTACACCTGCAATGTGTCCCGGGAGT...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCTTCACAAAGGGCCGATaGGCCTCAAACTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETFTKGR*ASNSNS
Trigger: GGAGTTTGAGTTTGAGGCGCATCGGCCCTTTGTGAA...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTTCACAAAGGGCCGATaGGCCTCAAACTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWFTKGR*ASNSNS
Trigger: GGAGTTTGAGTTTGAGGCGCATCGGCCCTTTGTGAA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATAGACTTGCTTGGAAGTaGTTATCTCCTGCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHRLAWK*LSPASC
Trigger: GCAGGACGCAGGAGATAAGCACTTCCAAGCAAGTCT...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGGAAGGGAGTCGCACTaGTGGCCTAGCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQGRESH*WPSSQA
Trigger: AGCCTGGCTGCTAGGCCAGCAGTGCGACTCCCTTCC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR GCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTCCCTTTGGGACGAACTaGCCCCAGGGGGCGACTTTC +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIPFGTN*PQGATF
Trigger: GAAAGTCGCCCCCTGGGGGCAGTTCGTCCCAAAGGG...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR GCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAGTTGGAGAATCCTGTaGCTCTGTTACCATGGGCAA +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQASWRIL*LCYHGQ
Trigger: TTGCCCATGGTAACAGAGGCACAGGATTCTCCAACT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR GCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATCCCCACACTTTGGCCTaGTCACTAGCAGTGATAATG +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHPHTLA*SLAVIM
Trigger: CATTATCACTGCTAGTGAGCAGGCCAAAGTGTGGGG...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCGGCCCCGACCCTGGGTaGCAGGTGATCAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIGPDPG*QVISNP
Trigger: AGGGTTGCTGATCACCTGCCACCCAGGGTCGGGGCC...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCCGGGGCCGCCCGTCTaGGCTACAGAATGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIPGPPV*ATECVP
Trigger: TGGAACGCATTCTGTAGCCCAGACGGGCGGCCCCGG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTTGCAGCGCAGCTTCATaGGGTTGCCCTGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNICSAAS*GCPARP
Trigger: AGGCCGTGCAGGGCAACCCCATGAAGCTGCGCTGCA...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTATTCCACCACCGTGGTaGCCTCCACCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAIPPPW*PPPPLS
Trigger: AGAGAGAGGAGGTGGAGGCCACCACGGTGGTGGAAT...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGGGCTCTCCACCTCCTaGTGGCCATTCCGATACTCG +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMGLSTS*WPFRYS
Trigger: CGAGTATCGGAATGGCCACCAGGAGGTGGAGAGCCC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTGTTCTCAGATGGGATaGCAAGGTAGTCAGACGCGT +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWCSQMG*QGSQTR
Trigger: ACGCGTCTGACTACCTTGCCATCCCATCTGAGAACA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTATGTTCTCAGATGGGATaGCAAGGTAGTCAGACGCGT +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVCSQMG*QGSQTR
Trigger: ACGCGTCTGACTACCTTGCCATCCCATCTGAGAACA...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNLLVLR*DGKVVR
Trigger: TCTGACTACCTTGCCATCCCATCTGAGAACAAGGAG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGVLFLH*YRRVLL
Trigger: AAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAAC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGTCCTAATGCCCAGGTaGTGTGCCCACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQVLMPR*CAHREG
Trigger: GCCCTCCCTGTGGGCACACCACCTGGGCATTAGGAC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGACCAGGAAGTGTAAACTaGGCAGCACCTAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGPGSVN*AAPKAY
Trigger: ATAAGCCTTAGGTGCTGCCCAGTTTACACTTCCTGG...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCCAGGAAGTGTAAACTaGGCAGCACCTAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAPGSVN*AAPKAY
Trigger: ATAAGCCTTAGGTGCTGCCCAGTTTACACTTCCTGG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACTGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHCNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGATGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGCNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCACCTGGGGGCTGAGGTaGGAGGATTGCTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSTWGLR*EDCLNL
Trigger: CAGGTTTAAGCAATCCTCCCACCTCAGCCCCCAGGT...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGGCATCCATGAGCTATaGGACTGGAAAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQGIHEL*DWKNFT
Trigger: TGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGRGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAAGACAGGGAGGTGGGTaGAGATTGGAAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRRQGGG*RLEVGW
Trigger: CCAGCCTACTTCCAATCTCCACCCACCTCCCTGTCT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGAAGAGACAGGGAGGTaGGTGGAGATTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHEETGR*VEIGSR
Trigger: CCTACTTCCAATCTCCACCCACCTCCCTGTCTCTTC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAAGGGAGTGTTTGGGTTaGGGCTCTGATTCAAGACCG +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGRECLG*GSDSRP
Trigger: CGGTCTTGAATCAGAGCCCCAACCCAAACACTCCCT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGAGGGAGTGTTTGGGTTaGGGCTCTGATTCAAGACCG +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKRECLG*GSDSRP
Trigger: CGGTCTTGAATCAGAGCCCCAACCCAAACACTCCCT...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACAGGCAGGGAGTGTTTaGGTTGGGGCTCTGATTCAA +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLQAGSV*VGALIQ
Trigger: TTGAATCAGAGCCCCAACCCAAACACTCCCTGCCTG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGGTGAGAATAAAGGCTaGGGTAGGGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSGENKG*GRDRQG
Trigger: TCCCTGCCTGTCCCTACCCCAGCCTTTATTCTCACC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGGAAGTCTGGGTGTGTaGGTGTCTGGGAATGGAGAA +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHGSLGV*VSGNGE
Trigger: TTCTCCATTCCCAGACACCCACACACCCAGACTTCC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGGAAGTCTGGGTGTGTaGGTGTCTGGGAATGGAGAA +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIGSLGV*VSGNGE
Trigger: TTCTCCATTCCCAGACACCCACACACCCAGACTTCC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAGACCTGTGACTGCATaGCACACTAAAGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETRPVTA*HTKGLG
Trigger: GCCTAGACCTTTAGTGTGCCATGCAGTCACAGGTCT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTCAGCTGGCCTGGGATaGAGACCGAGTTTGATATAT +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVSAGLG*RPSLIY
Trigger: ATATATCAAACTCGGTCTCCATCCCAGGCCAGCTGA...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCTGCCTGGGGAGGCCCTaGGAGCTTTTGGAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQICLGRP*ELLEPG
Trigger: ACCCGGCTCCAAAAGCTCCCAGGGCCTCCCCAGGCA...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGTGCCTCTGTTACCATaGGCAAGTTCAGATTGCCTC +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWVPLLP*ASSDCL
Trigger: GAGGCAATCTGAACTTGCCCATGGTAACAGAGGCAC...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGAAGAGATGCCACAGATaGGGAAGAGGTTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWKRCHR*GRGCTC
Trigger: ACACGTGCAACCTCTTCCCCATCTGTGGCATCTCTT...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAATAAACCTGTGGCCTaGAGGTTGGGATTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQANKPVA*RLGFLD
Trigger: ATCCAGGAATCCCAACCTCCAGGCCACAGGTTTATT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR CAA 72 bp GAATCCTGTGCCTCTGTTACCATGGGCAAGTTCAGATaGCCTCGACACTCAGGTCAAAGCAGTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: ESCASVTMGKFR*PRHSGQSSSPS
Trigger: GGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCATGGTAACAGAGGCACAGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR TCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAACTCCAGCCTCCTCGGTaGCTCTTAGGGGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKLQPPR*LLGGSA
Trigger: GGCTGATCCCCCTAAGAGTCACCGAGGAGGCTGGAG...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGAGAACAATGGATGCATaGAGGGAAGCGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLERTMDA*REAMGP
Trigger: GGGCCCCATCGCTTCCCTTCATGCATCCATTGTTCT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQACSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFRRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTAGGCGTGCTTCACTCTaGTGCTGTAGCAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSARRASL*CCSKVG
Trigger: GCCCACTTTGCTACAGCATCAGAGTGAAGCACGCCT...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGGCATGAGAATTGCTTaGACCCAAGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHGMRIA*TQEAEV
Trigger: AACCTCTGCCTCTTGGGTTCAAGCAATTCTCATGCC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGGGAGAGGCCGAGGCATaGGAATTGCTTGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWGEAEA*ELLEPK
Trigger: CTTGGGTTCAAGCAATTCTCATGCCTCGGCCTCTCC...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAGAGGCCGAGGCATaGGAATTGCTTGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEGEAEA*ELLEPK
Trigger: CTTGGGTTCAAGCAATTCTCATGCCTCGGCCTCTCC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGCTTGTCCCTGGGTGCTaGAGGATGTCACACTTGGAC +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLELVPGC*RMSHLD
Trigger: GTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAG...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTTGTCCCTGGGTGCTaGAGGATGTCACACTTGGAC +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFLVPGC*RMSHLD
Trigger: GTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GATCTTTTCCTTCATGCCCCACACTTTGGCCTGCTCACTAGCAGTGATAATGCTGTGGTAGAGAAGCAGTaGGTGGGATTAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: DLFLHAPHFGLLTSSDNAVVEKQ*VGLGVR
Trigger: TCTCACCCCTAATCCCACTCACTGCTTCTCTACCAC...AGCATTATCACTGCTAGTGAGCAGGCCAAAGTGTGGGGCATGAAGGAAAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTTTTGGGTTGGGGCTCTaGTTCAAGACCGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLFGLGL*FKTEVT
Trigger: TGTCACCTCGGTCTTGAATCAGAGCCCCAACCCAAA...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTTTTGGGTTGGGGCTCTaGTTCAAGACCGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIFGLGL*FKTEVT
Trigger: TGTCACCTCGGTCTTGAATCAGAGCCCCAACCCAAA...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTCCCTCAGATTTATGTaGGGAGGACTCACAGATTCT +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVSLRFM*GGLTDS
Trigger: AGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGA...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACTCCCTCAGATTTATGTaGGGAGGACTCACAGATTCT +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNSLRFM*GGLTDS
Trigger: AGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGA...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTCCTGCAAAGATGCAGTaGCACAGCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLPAKMQ*HSLFPQ
Trigger: CTGAGGGAAAAGGCTGTGTCACTGCATCTTTGCAGG...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGAGTAGAATGAGTGGATaGTCAGACTGGCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWSRMSG*SDWQAH
Trigger: GTGTGCTTGCCAGTCTGATCATCCACTCATTCTACT...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAGTAGAATGAGTGGATaGTCAGACTGGCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETSRMSG*SDWQAH
Trigger: GTGTGCTTGCCAGTCTGATCATCCACTCATTCTACT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAAGCTCTTGCCAAGCCGTaGCGCAGGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKALAKP*RREEAQ
Trigger: CTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGC...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp ATGGGCAAGTTCAGATTGCCTCGACACTCAGGTCAAAGCAGTTCACCTTCCGAACACCTTCCGAAGCGCTaGCATCATACAGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: MGKFRLPRHSGQSSSPSEHLPKR*HHTELS
Trigger: AGAAAGCTCTGTATGATGTCAGCGCTTCGGAAGGTG...TTCGGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR TCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCAGCTCTTTCAGGCAATaGTGTCATCTGCAAGGCGCG +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSSSFRQ*CHLQGA
Trigger: CGCGCCTTGCAGATGACATCATTGCCTGAAAGAGCT...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657191.1
CDS-3UTR TCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGTGCAACAGAAACACCTaGGTTAGGCTGCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWCNRNT*VRLLKG
Trigger: GCCTTTCAGCAGCCTAACTCAGGTGTTTCTGTTGCA...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR GCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCGCAGCTTCATGGGGTTaGCCTGCACGGCCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIAASWG*PARPPS
Trigger: AGACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGC...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGTGATGGACACGTCCTaGAGGTCCTTGCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEVMDTS*RSLLPF
Trigger: GAATGGCAGCAAGGACCTGCAGGACGTGTCCATCAC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAACTCCCGGGACACATTaGAGGTGTAGAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSTPGTH*RCRGQS
Trigger: ACTCTGGCCTCTACACCTGCAATGTGTCCCGGGAGT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGACTCCCGGGACACATTaGAGGTGTAGAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLETPGTH*RCRGQS
Trigger: ACTCTGGCCTCTACACCTGCAATGTGTCCCGGGAGT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGTTCACAAAGGGCCGATaGGCCTCAAACTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKFTKGR*ASNSNS
Trigger: GGAGTTTGAGTTTGAGGCGCATCGGCCCTTTGTGAA...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGATTCACAAAGGGCCGATaGGCCTCAAACTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGFTKGR*ASNSNS
Trigger: GGAGTTTGAGTTTGAGGCGCATCGGCCCTTTGTGAA...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTAATGCCCAGGTGGTGTaGCCACAGGGAGGGCACACA +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSNAQVV*PQGGHT
Trigger: TGTGTGCCCTCCCTGTGGGCACACCACCTGGGCATT...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTCTGAGGTGGGAGGATTaGTTAAACCTGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLLRWED*LNLGQL
Trigger: CAACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAG...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGGCAATCATGCATACTaGCGGGTTCAACTTAGATAC +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGGNHAY*RVQLRY
Trigger: GTATCTAAGTTGAACCCGGCAGTATGCATGATTGCC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGAGAGAGGAGGGAGTTaGTGTCTCCTACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSERGGS*CLLLPS
Trigger: GCTGGGAAGTAGGAGACAGCAACTCCCTCCTCTCTC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTTCTTCCTGCAAAGATaGAGTGACACAGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVFFLQR*SDTAFS
Trigger: GGAAAAGGCTGTGTCACTGCATCTTTGCAGGAAGAA...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGCTTCTCTTTCTTCCTaGAAAGATGCAGTGACACAG +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGASLSS*KDAVTQ
Trigger: CTGTGTCACTGCATCTTTGCAGGAAGAAAGAGAAGC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACAGACTTGCTTGGAAGTaGTTATCTCCTGCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHRLAWK*LSPASC
Trigger: GCAGGACGCAGGAGATAAGCACTTCCAAGCAAGTCT...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTAGCAGAGGCAGCTCTTaGCAAGCCGTGACGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNISRGSS*QAVTQG
Trigger: TCCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCT...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGAGATGGGGAAGAGGTTaGACGTGTGATTACCTCCTC +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWRWGRG*TCDYLL
Trigger: GAGGAGGTAATCACACGTGCAACCTCTTCCCCATCT...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAAGGCGATGTCAGAGGTTaGGGGGTGGGTGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKGDVRG*GVGVEA
Trigger: CGCCTCTACACCCACCCCCCAACCTCTGACATCGCC...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299333.8
ENST00000392770.6
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQKAGIF*GWRLPR
Trigger: CCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTT...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGACCATTCCACCACCGTaGTGGCCTCCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQTIPPP*WPPPPL
Trigger: GAGAGGAGGTGGAGGCCACCACGGTGGTGGAATGGT...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACCAAAGAAGGGAGTTGGAGAATCCTGTGCCTCTGTTACCATGGGCAAGTTCAGTCAGACGCGTTTTCTTaGGCTGCCTCTTCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TKEGSWRILCLCYHGQVQSDAFS*AASSAF
Trigger: AAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGA...CTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACTCAGACGCGTTTTCTTaGGCTGCCTCTTCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHSDAFS*AASSAF
Trigger: AAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGA...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKLLVLR*DGKVVR
Trigger: TCTGACTACCTTGCCATCCCATCTGAGAACAAGGAG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCCAGGAAGTGTAAACTaGGCAGCACCTAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETPGSVN*AAPKAY
Trigger: ATAAGCCTTAGGTGCTGCCCAGTTTACACTTCCTGG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACCAGGAAGTGTAAACTaGGCAGCACCTAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKPGSVN*AAPKAY
Trigger: ATAAGCCTTAGGTGCTGCCCAGTTTACACTTCCTGG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTTGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPICNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTTTTGGGAGGCTGAGGTaGGTGGGTCATTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIFGRLR*VGHLRS
Trigger: TGACCTCAAATGACCCACCCACCTCAGCCTCCCAAA...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAACCTGGGGGCTGAGGTaGGAGGATTGCTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSTWGLR*EDCLNL
Trigger: CAGGTTTAAGCAATCCTCCCACCTCAGCCCCCAGGT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTGTAGTCCCAGTTACCTaGGGGCTGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVVVPVT*GLRWED
Trigger: ATCCTCCCACCTCAGCCCCCAGGTAACTGGGACTAC...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGTTAACGGTCTGGTTTTaGGCCAGGCACAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKLTVWF*ARHSCS
Trigger: TGAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAA...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACTTAACGGTCTGGTTTTaGGCCAGGCACAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHLTVWF*ARHSCS
Trigger: TGAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAA...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAATGTGTTAACGGTCTaGTTTTGGGCCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETNVLTV*FWARHS
Trigger: ACTGTGCCTGGCCCAAAACCAGACCGTTAACACATT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAAGATACACGAGCTATTaGGCCACCGAGGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGRYTSY*ATEENG
Trigger: ACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAAGATACACGAGCTATTaGGCCACCGAGGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLRYTSY*ATEENG
Trigger: ACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCT...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWRGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGAAGAGACAGGGAGGTaGGTGGAGATTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIEETGR*VEIGSR
Trigger: CCTACTTCCAATCTCCACCCACCTCCCTGTCTCTTC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCAGGGAGTGTTTGGGTTaGGGCTCTGATTCAAGACCG +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSRECLG*GSDSRP
Trigger: CGGTCTTGAATCAGAGCCCCAACCCAAACACTCCCT...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCCAGGCAGGGAGTGTTTaGGTTGGGGCTCTGATTCAA +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSQAGSV*VGALIQ
Trigger: TTGAATCAGAGCCCCAACCCAAACACTCCCTGCCTG...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGTACATCATGATTTCTaGGACCACAGAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETVHHDF*DHRGEV
Trigger: GACTTCACCTCTGTGGTCTCAGAAATCATGATGTAC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGTACATCATGATTTCTaGGACCACAGAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKVHHDF*DHRGEV
Trigger: GACTTCACCTCTGTGGTCTCAGAAATCATGATGTAC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TGTTCAGGCCACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTGGTACCGGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: CSGHLMSHCSCSIPPLVPGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...CGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGTGGCCTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGGCATGAGAATTGCTTaGACCCAAGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLGMRIA*TQEAEV
Trigger: AACCTCTGCCTCTTGGGTTCAAGCAATTCTCATGCC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGACCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTCCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLSWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTTGGAAGTAGGCTGGTaGTCACAGTACCTTATTGAT +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVLEVGW*SQYLID
Trigger: ATCAATAAGGTACTGTGATCACCAGCCTACTTCCAA...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCATTTGGGTTGGGGCTCTaGTTCAAGACCGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSFGLGL*FKTEVT
Trigger: TGTCACCTCGGTCTTGAATCAGAGCCCCAACCCAAA...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTGGGGAGGAAGTGGGCTaGACTAATCATGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVGEEVG*TNHELS
Trigger: GGACAGCTCATGATTAGTTCAGCCCACTTCCTCCCC...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGGGGAGGAAGTGGGCTaGACTAATCATGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMGEEVG*TNHELS
Trigger: GGACAGCTCATGATTAGTTCAGCCCACTTCCTCCCC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGAACAAGGAGTTTACTaGAAAACAGCACATACAGGC +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAEQGVY*KTAHTG
Trigger: GCCTGTATGTGCTGTTTTTCAGTAAACTCCTTGTTC...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGAGCCCAAAAATTCTTTaGCCAAAGAAGGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVSPKIL*PKKGVG
Trigger: TCCAACTCCCTTCTTTGGTCAAAGAATTTTTGGGCT...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR TCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGCCTGAGTTAGGCTGCTaGAAGGCCTTCCCACTCACG +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQPELGC*KAFPLT
Trigger: CGTGAGTGGGAAGGCCTTTCAGCAGCCTAACTCAGG...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR GCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTACTCCCGGGACACATTaGAGGTGTAGAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSTPGTH*RCRGQS
Trigger: ACTCTGGCCTCTACACCTGCAATGTGTCCCGGGAGT...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGATTCACAAAGGGCCGATaGGCCTCAAACTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRFTKGR*ASNSNS
Trigger: GGAGTTTGAGTTTGAGGCGCATCGGCCCTTTGTGAA...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTTCTTCCTGCAAAGATaGAGTGACACAGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWFFLQR*SDTAFS
Trigger: GGAAAAGGCTGTGTCACTGCATCTTTGCAGGAAGAA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAAGACTTGCTTGGAAGTaGTTATCTCCTGCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRRLAWK*LSPASC
Trigger: GCAGGACGCAGGAGATAAGCACTTCCAAGCAAGTCT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTATTCCACCACCGTGGTaGCCTCCACCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSIPPPW*PPPPLS
Trigger: AGAGAGAGGAGGTGGAGGCCACCACGGTGGTGGAAT...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGATCAGACGCGTTTTCTTaGGCTGCCTCTTCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRSDAFS*AASSAF
Trigger: AAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGA...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTTCAGACGCGTTTTCTTaGGCTGCCTCTTCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPISDAFS*AASSAF
Trigger: AAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGA...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCTGTTCTCAGATGGGATaGCAAGGTAGTCAGACGCGT +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSCSQMG*QGSQTR
Trigger: ACGCGTCTGACTACCTTGCCATCCCATCTGAGAACA...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACCAAAGAAGGGAGTTGGAGAATCCTGTGCCTCTGTTACCATGGGCAAGTTCAGTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: TKEGSWRILCLCYHGQVQLASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...CTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLILASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQALYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGACACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGCACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGACCAGGAAGTGTAAACTaGGCAGCACCTAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGPGSVN*AAPKAY
Trigger: ATAAGCCTTAGGTGCTGCCCAGTTTACACTTCCTGG...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCATGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSCNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGTTTGGGAGGCTGAGGTaGGTGGGTCATTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWFGRLR*VGHLRS
Trigger: TGACCTCAAATGACCCACCCACCTCAGCCTCCCAAA...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGCCCCTCTCTTGTCCCTaGGTGCTGAAGGATGTCACA +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMPLSCP*VLKDVT
Trigger: TGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGG...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTTTAACGGTCTGGTTTTaGGCCAGGCACAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPILTVWF*ARHSCS
Trigger: TGAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAA...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGATTAACGGTCTGGTTTTaGGCCAGGCACAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRLTVWF*ARHSCS
Trigger: TGAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAA...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGAATGTGTTAACGGTCTaGTTTTGGGCCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKNVLTV*FWARHS
Trigger: ACTGTGCCTGGCCCAAAACCAGACCGTTAACACATT...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAAATGTGTTAACGGTCTaGTTTTGGGCCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGNVLTV*FWARHS
Trigger: ACTGTGCCTGGCCCAAAACCAGACCGTTAACACATT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGACATGAGCTATGGGACTaGAAAAATTTCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGHELWD*KNFTLR
Trigger: CCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATG...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACGGCATCCATGAGCTATaGGACTGGAAAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNGIHEL*DWKNFT
Trigger: TGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCC...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGGCATCCATGAGCTATaGGACTGGAAAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGGIHEL*DWKNFT
Trigger: TGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGAAAAGGAAGCAGCTATaGTCTAAGTGGAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVKRKQL*SKWKEN
Trigger: GTTCTCTTTCCACTTAGACCATAGCTGCTTCCTTTT...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGACCTGTGACTGCATaGCACACTAAAGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLRPVTA*HTKGLG
Trigger: GCCTAGACCTTTAGTGTGCCATGCAGTCACAGGTCT...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTATTGGATTGTGTTCGATaGCAGTTCACAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVLDCVR*QFTSLQ
Trigger: TTGCAGGCTTGTGAACTGCCATCGAACACAATCCAA...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGTTCGAGGAAACCCTTTaGGACGAACTGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQFEETL*DELPPG
Trigger: CCCTGGGGGCAGTTCGTCCCAAAGGGTTTCCTCGAA...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CCA 90 bp ATGGGCAAGTTCAGATTGCCTCGACACTCAGGTCAAAGCAGTTCACCTTCCGAAACCAAAGAAGGGAGTTaGAGAATCCTGTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: MGKFRLPRHSGQSSSPSETKEGS*RILCLC
Trigger: ACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGT...TTCGGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTTGAGCTGCCGGTGGTaGAGGGTGGTATTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSLSCRW*RVVFPP
Trigger: AGGAGGGAATACCACCCTCCACCACCGGCAGCTCAA...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659826.1
3UTR CAA 72 bp AGTCATTTGGAGCACAGGGGAGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAACTAGGAGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SHLEHRGEIQLA*ECLVGKLGEGE
Trigger: CTCACCCTCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGCTCCAAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CAA 72 bp AGCCCAGCCCAAAAATTCTTTGACCAAAGAAGGGAGTaGGAGAATCCTGTGCCTCTGTTACCATGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SPAQKFFDQRRE*ENPVPLLPWAS
Trigger: ACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGTCAAAGAATTTTTGGGCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR TCA 90 bp ATGGGCAAGTTCAGATTGCCTCGACACTCAGGTCAAAGCAGTTCACCTTCCGAAGTACATCATGATTTCTaGGACCACAGAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: MGKFRLPRHSGQSSSPSEVHHDF*DHRGEV
Trigger: GACTTCACCTCTGTGGTCTCAGAAATCATGATGTAC...TTCGGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTAGAACAATGGATGCATaGAGGGAAGCGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIRTMDA*REAMGP
Trigger: GGGCCCCATCGCTTCCCTTCATGCATCCATTGTTCT...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACCAAAGAAGGGAGTTGGAGAATCCTGTGCCTCTGTTACCATGGGCAAGTTCAGTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: TKEGSWRILCLCYHGQVQCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...CTGAACTTGCCCATGGTAACAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR TCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGGTGCACAGAAATTTTaGGAGGAAGAACTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKGAQKF*EEELRN
Trigger: ATTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGGGCATGAGAATTGCTTaGACCCAAGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWGMRIA*TQEAEV
Trigger: AACCTCTGCCTCTTGGGTTCAAGCAATTCTCATGCC...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTCAGTTGAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIQLRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTCAACTG...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp CAATATATCATCTCGATGAGCAGCCACAAGGTGAGGAAGACCAGAAGGATGTACAGCTGGTGGCATCCATaGGCTATGGGACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: QYIISMSSHKVRKTRRMYSWWHP*AMGLEK
Trigger: TTTTTCCAGTCCCATAGCTCATGGATGCCACCAGCT...GTACATCCTTCTGGTCTTCCTCACCTTGTGGCTGCTCATCGAGATGATATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGTGGTAGAGAAGCAGTaGGTGGGATTAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMVVEKQ*VGLGVR
Trigger: TCTCACCCCTAATCCCACTCACTGCTTCTCTACCAC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTTGGAAGTAGGCTGGTaGTCACAGTACCTTATTGAT +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWLEVGW*SQYLID
Trigger: ATCAATAAGGTACTGTGATCACCAGCCTACTTCCAA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTCACATTCATGGCTGTaGAGTAGTAAGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVSHSWL*SSKNGK
Trigger: TTTCCCATTCTTACTACTTCACAGCCATGAATGTGA...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCCTGCAAAGATGCAGTaGCACAGCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSPAKMQ*HSLFPQ
Trigger: CTGAGGGAAAAGGCTGTGTCACTGCATCTTTGCAGG...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTCAGATACATTTGCAGTaGCTAGGTGAATTCACTGAA +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAQIHLQ*LGEFTE
Trigger: TTCAGTGAATTCACCTAGTCACTGCAAATGTATCTG...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCAGATACATTTGCAGTaGCTAGGTGAATTCACTGAA +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNQIHLQ*LGEFTE
Trigger: TTCAGTGAATTCACCTAGTCACTGCAAATGTATCTG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAAGATGTTAGTAGAATaGGTGGATGATCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKKMLVE*VDDQTG
Trigger: GCCAGTCTGATCATCCACTCATTCTACTAACATCTT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAAAGATGTTAGTAGAATaGGTGGATGATCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVKMLVE*VDDQTG
Trigger: GCCAGTCTGATCATCCACTCATTCTACTAACATCTT...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGCCCTGTCTTTAACTTaGTCTTTTCCTTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIALSLT*SFPSCP
Trigger: GGGGCATGAAGGAAAAGATCAAGTTAAAGACAGGGC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGTCTTCATGCAGGAGATaGAGCGCAGCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMSSCRR*SAASWG
Trigger: ACCCCATGAAGCTGCGCTGCATCTCCTGCATGAAGA...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQANISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVNISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGCCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGCTGAGGTGGGAGGATTaGTTAAACCTGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMLRWED*LNLGQL
Trigger: CAACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAG...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGGCAATCATGCATACTaGCGGGTTCAACTTAGATAC +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWGNHAY*RVQLRY
Trigger: GTATCTAAGTTGAACCCGGCAGTATGCATGATTGCC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGGGCAATCATGCATACTaGCGGGTTCAACTTAGATAC +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKGNHAY*RVQLRY
Trigger: GTATCTAAGTTGAACCCGGCAGTATGCATGATTGCC...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGCTTCTCTTTCTTCCTaGAAAGATGCAGTGACACAG +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWASLSS*KDAVTQ
Trigger: CTGTGTCACTGCATCTTTGCAGGAAGAAAGAGAAGC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGTCAGACGCGTTTTCTTaGGCTGCCTCTTCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWSDAFS*AASSAF
Trigger: AAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGA...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTCTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLLLVLR*DGKVVR
Trigger: TCTGACTACCTTGCCATCCCATCTGAGAACAAGGAG...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLVLFLH*YRRVLL
Trigger: AAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAAC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GATCTTTTCCTTCATGCCCCACACTTTGGCCTGCTCACTAGCAGTGATAATGCTTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: DLFLHAPHFGLLTSSDNALASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...AGCATTATCACTGCTAGTGAGCAGGCCAAAGTGTGGGGCATGAAGGAAAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTATTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVLYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATCACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTCCAGGAAGTGTAAACTaGGCAGCACCTAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIPGSVN*AAPKAY
Trigger: ATAAGCCTTAGGTGCTGCCCAGTTTACACTTCCTGG...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTTTTGGGAGGCTGAGGTaGGTGGGTCATTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVFGRLR*VGHLRS
Trigger: TGACCTCAAATGACCCACCCACCTCAGCCTCCCAAA...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATGATGCACTCTCCTTTTaGAGGATATTTCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHDALSF*RIFQSH
Trigger: GTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATC...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 4 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTCCCCTCTCTTGTCCCTaGGTGCTGAAGGATGTCACA +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSPLSCP*VLKDVT
Trigger: TGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGG...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTAATGTGTTAACGGTCTaGTTTTGGGCCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPINVLTV*FWARHS
Trigger: ACTGTGCCTGGCCCAAAACCAGACCGTTAACACATT...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGGCATCCATGAGCTATaGGACTGGAAAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETGIHEL*DWKNFT
Trigger: TGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTAGATACACGAGCTATTaGGCCACCGAGGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFRYTSY*ATEENG
Trigger: ACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCT...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAAGATACACGAGCTATTaGGCCACCGAGGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSRYTSY*ATEENG
Trigger: ACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAAAAAGGAAGCAGCTATaGTCTAAGTGGAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGKRKQL*SKWKEN
Trigger: GTTCTCTTTCCACTTAGACCATAGCTGCTTCCTTTT...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSRGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRRGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGCAGGCAGGGAGTGTTTaGGTTGGGGCTCTGATTCAA +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMQAGSV*VGALIQ
Trigger: TTGAATCAGAGCCCCAACCCAAACACTCCCTGCCTG...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTGGTGAGAATAAAGGCTaGGGTAGGGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIGENKG*GRDRQG
Trigger: TCCCTGCCTGTCCCTACCCCAGCCTTTATTCTCACC...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGAGACCTGTGACTGCATaGCACACTAAAGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWRPVTA*HTKGLG
Trigger: GCCTAGACCTTTAGTGTGCCATGCAGTCACAGGTCT...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAAACATTTCCAGAGTTTaGATTGTGTTCGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGNISRV*IVFDGS
Trigger: ACTGCCATCGAACACAATCCAAACTCTGGAAATGTT...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGTACATCATGATTTCTaGGACCACAGAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIVHHDF*DHRGEV
Trigger: GACTTCACCTCTGTGGTCTCAGAAATCATGATGTAC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGATGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTGGCATGAGAATTGCTTaGACCCAAGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVGMRIA*TQEAEV
Trigger: AACCTCTGCCTCTTGGGTTCAAGCAATTCTCATGCC...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCCCAGTCCGTGCTTGTaGAAGAAGCATTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSPSPCL*KKHCHR
Trigger: TCTATGGCAATGCTTCTTTCACAAGCACGGACTGGG...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCAGTTGAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIQLRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTCAACTG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGCAGTTGAGGCTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASEQLRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAGCCTCAACTG...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAGGACTCACAGATTCTaGGATGGATGGAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKRTHRF*DGWNFF
Trigger: AAAGAAATTCCATCCATCTCAGAATCTGTGAGTCCT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTTCCCTCAGATTTATGTaGGGAGGACTCACAGATTCT +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLSLRFM*GGLTDS
Trigger: AGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGA...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTTTTCATTTACAAAATaGGGTGAGAGGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAFSFTK*GERKAS
Trigger: AGAAGCCTTCCTCTCACCTCATTTTGTAAATGAAAA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACAGATACATTTGCAGTaGCTAGGTGAATTCACTGAA +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVQIHLQ*LGEFTE
Trigger: TTCAGTGAATTCACCTAGTCACTGCAAATGTATCTG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAAAGATGTTAGTAGAATaGGTGGATGATCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLKMLVE*VDDQTG
Trigger: GCCAGTCTGATCATCCACTCATTCTACTAACATCTT...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGTGCTTTTCAGACCTGTaGCTGCATGGCACACTAAAG +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLECFSDL*LHGTLK
Trigger: CTTTAGTGTGCCATGCAGTCACAGGTCTGAAAAGCA...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCATGCTTTTCAGACCTGTaGCTGCATGGCACACTAAAG +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSCFSDL*LHGTLK
Trigger: CTTTAGTGTGCCATGCAGTCACAGGTCTGAAAAGCA...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGATGGAGACCGAGTTTaGTATATAAATCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETDGDRV*YINQTC
Trigger: GCAAGTCTGATTTATATATCAAACTCGGTCTCCATC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGATGGAGACCGAGTTTaGTATATAAATCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWDGDRV*YINQTC
Trigger: GCAAGTCTGATTTATATATCAAACTCGGTCTCCATC...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTCAGGCATTACGTTGTTaGGGGCTTAGGTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSQALRC*GLRWSG
Trigger: TCCTGACCACCTAAGCCCTCAACAACGTAATGCCTG...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGAACAAGGAGTTTACTaGAAAACAGCACATACAGGC +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHEQGVY*KTAHTG
Trigger: GCCTGTATGTGCTGTTTTTCAGTAAACTCCTTGTTC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAAGGCAGGGTAGACAGTaGCCTAAGGGACCAAATTTA +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSRQGRQ*PKGPNL
Trigger: TAAATTTGGTCCCTTAGGTCACTGTCTACCCTGCCT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR TCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGATAAAATAACTCACTaGGAATTTCCCACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWDKITH*EFPTQS
Trigger: GGACTGGGTGGGAAATTCTCAGTGAGTTATTTTATC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR GCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCGTGATGGACACGTCCTaGAGGTCCTTGCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIVMDTS*RSLLPF
Trigger: GAATGGCAGCAAGGACCTGCAGGACGTGTCCATCAC...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETNISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTCTGAGGTGGGAGGATTaGTTAAACCTGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSLRWED*LNLGQL
Trigger: CAACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAG...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAAGAAAAAGGCAATCATaGATACTGCCGGGTTCAACT +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGRKRQS*ILPGST
Trigger: AGTTGAACCCGGCAGTATGCATGATTGCCTTTTTCT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGCTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLELLVLR*DGKVVR
Trigger: TCTGACTACCTTGCCATCCCATCTGAGAACAAGGAG...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFLASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTTTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLILYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTTTGGGAGGCTGAGGTaGGTGGGTCATTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSFGRLR*VGHLRS
Trigger: TGACCTCAAATGACCCACCCACCTCAGCCTCCCAAA...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGATGCACTCTCCTTTTaGAGGATATTTCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIDALSF*RIFQSH
Trigger: GTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGCATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCCCCTCTCTTGTCCCTaGGTGCTGAAGGATGTCACA +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIPLSCP*VLKDVT
Trigger: TGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAACCCCTCTCTTGTCCCTaGGTGCTGAAGGATGTCACA +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKPLSCP*VLKDVT
Trigger: TGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGG...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGACCTGGGGGCTGAGGTaGGAGGATTGCTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASETWGLR*EDCLNL
Trigger: CAGGTTTAAGCAATCCTCCCACCTCAGCCCCCAGGT...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTTAACGGTCTGGTTTTaGGCCAGGCACAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSLTVWF*ARHSCS
Trigger: TGAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAA...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAAAAGGAAGCAGCTATaGTCTAAGTGGAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETKRKQL*SKWKEN
Trigger: GTTCTCTTTCCACTTAGACCATAGCTGCTTCCTTTT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWRGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAAAGACAGGGAGGTGGGTaGAGATTGGAAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKRQGGG*RLEVGW
Trigger: CCAGCCTACTTCCAATCTCCACCCACCTCCCTGTCT...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGAGACAGGGAGGTGGGTaGAGATTGGAAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASERQGGG*RLEVGW
Trigger: CCAGCCTACTTCCAATCTCCACCCACCTCCCTGTCT...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTGAAGAGACAGGGAGGTaGGTGGAGATTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSEETGR*VEIGSR
Trigger: CCTACTTCCAATCTCCACCCACCTCCCTGTCTCTTC...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGAAGAGACAGGGAGGTaGGTGGAGATTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQEETGR*VEIGSR
Trigger: CCTACTTCCAATCTCCACCCACCTCCCTGTCTCTTC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAACAGACATCTAGTCTaGGTCTTTCGTAGGATTATG +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKNRHLV*VFRRIM
Trigger: CATAATCCTACGAAAGACCCAGACTAGATGTCTGTT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGAGGGAGTGTTTGGGTTaGGGCTCTGATTCAAGACCG +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQRECLG*GSDSRP
Trigger: CGGTCTTGAATCAGAGCCCCAACCCAAACACTCCCT...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCGGTGAGAATAAAGGCTaGGGTAGGGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIGENKG*GRDRQG
Trigger: TCCCTGCCTGTCCCTACCCCAGCCTTTATTCTCACC...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGAGACCTGTGACTGCATaGCACACTAAAGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMRPVTA*HTKGLG
Trigger: GCCTAGACCTTTAGTGTGCCATGCAGTCACAGGTCT...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCATCAGCTGGCCTGGGATaGAGACCGAGTTTGATATAT +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSSAGLG*RPSLIY
Trigger: ATATATCAAACTCGGTCTCCATCCCAGGCCAGCTGA...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAACATTTCCAGAGTTTaGATTGTGTTCGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKNISRV*IVFDGS
Trigger: ACTGCCATCGAACACAATCCAAACTCTGGAAATGTT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR CAA 72 bp CTGGGATGGAGACCGAGTTTGATATATAAATCAGACTaGCTTGGAAGTGCTTATCTCCTGCGTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGWRPSLIYKSD*LGSAYLLRPAA
Trigger: TGCAGCAGGACGCAGGAGATAAGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTTGCAGTAATGGAGAATaGACCAGTTCCAGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFCSNGE*TSSSQL
Trigger: TAACTGGCTGGAACTGGTTCATTCTCCATTACTGCA...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTGGCATGAGAATTGCTTaGACCCAAGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIGMRIA*TQEAEV
Trigger: AACCTCTGCCTCTTGGGTTCAAGCAATTCTCATGCC...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGGTGGTAGAGAAGCAGTaGGTGGGATTAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASEVVEKQ*VGLGVR
Trigger: TCTCACCCCTAATCCCACTCACTGCTTCTCTACCAC...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAAGTGAATTGTGTTATTaGGGATCAGACATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKSELCY*GSDMGN
Trigger: ATTTCCCATGTCTGATCCTCAATAACACAATTCACT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGTCACATTCATGGCTGTaGAGTAGTAAGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: RVDLSPVRACERSIAIDKSHSWL*SSKNGK
Trigger: TTTCCCATTCTTACTACTTCACAGCCATGAATGTGA...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTTCACATTCATGGCTGTaGAGTAGTAAGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLISHSWL*SSKNGK
Trigger: TTTCCCATTCTTACTACTTCACAGCCATGAATGTGA...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTTCCCTCAGATTTATGTaGGGAGGACTCACAGATTCT +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFSLRFM*GGLTDS
Trigger: AGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGA...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCCTGCAAAGATGCAGTaGCACAGCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIPAKMQ*HSLFPQ
Trigger: CTGAGGGAAAAGGCTGTGTCACTGCATCTTTGCAGG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTTTTCATTTACAAAATaGGGTGAGAGGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWFSFTK*GERKAS
Trigger: AGAAGCCTTCCTCTCACCTCATTTTGTAAATGAAAA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGTGCTTTTCAGACCTGTaGCTGCATGGCACACTAAAG +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMCFSDL*LHGTLK
Trigger: CTTTAGTGTGCCATGCAGTCACAGGTCTGAAAAGCA...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGAACAAGGAGTTTACTaGAAAACAGCACATACAGGC +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSEQGVY*KTAHTG
Trigger: GCCTGTATGTGCTGTTTTTCAGTAAACTCCTTGTTC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTATTTAGTCATATCGTCTaGTCCGTTATGTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVFSHIV*SVMSLS
Trigger: AGAAAGAGACATAACGGATCAGACGATATGACTAAA...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR GCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGTCTTCATGCAGGAGATaGAGCGCAGCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASESSCRR*SAASWG
Trigger: ACCCCATGAAGCTGCGCTGCATCTCCTGCATGAAGA...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTGAACAGAACAATGGATaGATGAAGGGAAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSEQNNG*MKGSDG
Trigger: CCCATCGCTTCCCTTCATGCATCCATTGTTCTGTTC...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLINISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLNISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCACCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGCCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAAGAAAAAGGCAATCATaGATACTGCCGGGTTCAACT +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRRKRQS*ILPGST
Trigger: AGTTGAACCCGGCAGTATGCATGATTGCCTTTTTCT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGGCTTCTCTTTCTTCCTaGAAAGATGCAGTGACACAG +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWASLSS*KDAVTQ
Trigger: CTGTGTCACTGCATCTTTGCAGGAAGAAAGAGAAGC...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTTATATAAATCAGACTTaGTTGGAAGTGCTTATCTCC +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQAYINQT*LEVLIS
Trigger: GGAGATAAGCACTTCCAAGCAAGTCTGATTTATATA...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGTCAGACGCGTTTTCTTaGGCTGCCTCTTCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQSDAFS*AASSAF
Trigger: AAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGA...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTTGTTCTCAGATGGGATaGCAAGGTAGTCAGACGCGT +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNICSQMG*QGSQTR
Trigger: ACGCGTCTGACTACCTTGCCATCCCATCTGAGAACA...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSLLVLR*DGKVVR
Trigger: TCTGACTACCTTGCCATCCCATCTGAGAACAAGGAG...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSVLFLH*YRRVLL
Trigger: AAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAAC...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGATTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRLYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGTGTAATCCCAGCTACTaGAGAGGCCGAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASECNPSY*RGRGMR
Trigger: TCTCATGCCTCGGCCTCTCCAGTAGCTGGGATTACA...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAATTTGGGAGGCTGAGGTaGGTGGGTCATTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKFGRLR*VGHLRS
Trigger: TGACCTCAAATGACCCACCCACCTCAGCCTCCCAAA...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGATGCACTCTCCTTTTaGAGGATATTTCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSDALSF*RIFQSH
Trigger: GTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTAATGTGTTAACGGTCTaGTTTTGGGCCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSNVLTV*FWARHS
Trigger: ACTGTGCCTGGCCCAAAACCAGACCGTTAACACATT...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGACATGAGCTATGGGACTaGAAAAATTTCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRHELWD*KNFTLR
Trigger: CCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATG...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGGCATCCATGAGCTATaGGACTGGAAAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIGIHEL*DWKNFT
Trigger: TGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGGCATCCATGAGCTATaGGACTGGAAAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSGIHEL*DWKNFT
Trigger: TGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGGCATCCATGAGCTATaGGACTGGAAAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLGIHEL*DWKNFT
Trigger: TGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGAGATACACGAGCTATTaGGCCACCGAGGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQRYTSY*ATEENG
Trigger: ACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCT...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGAAAAGGAAGCAGCTATaGTCTAAGTGGAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWKRKQL*SKWKEN
Trigger: GTTCTCTTTCCACTTAGACCATAGCTGCTTCCTTTT...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACAACAGACATCTAGTCTaGGTCTTTCGTAGGATTATG +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHNRHLV*VFRRIM
Trigger: CATAATCCTACGAAAGACCCAGACTAGATGTCTGTT...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGAACAGACATCTAGTCTaGGTCTTTCGTAGGATTATG +
Preference number: 4 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWNRHLV*VFRRIM
Trigger: CATAATCCTACGAAAGACCCAGACTAGATGTCTGTT...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAGATTGAGCCAAGCTTaGCCTTTAGTGAATTGTGTT +
Preference number: 4 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIRLSQA*PLVNCV
Trigger: AACACAATTCACTAAAGGCCAAGCTTGGCTCAATCT...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAAGATTGAGCCAAGCTTaGCCTTTAGTGAATTGTGTT +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLRLSQA*PLVNCV
Trigger: AACACAATTCACTAAAGGCCAAGCTTGGCTCAATCT...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAAGATTGAGCCAAGCTTaGCCTTTAGTGAATTGTGTT +
Preference number: 4 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGRLSQA*PLVNCV
Trigger: AACACAATTCACTAAAGGCCAAGCTTGGCTCAATCT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTAGATTAAGTAAGGTTTaGATGATGCTGCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: WATEENGVVVSILLLPQARLSKV*MMLLFR
Trigger: TCTGAAAAGCAGCATCATCCAAACCTTACTTAATCT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACAGATTAAGTAAGGTTTaGATGATGCTGCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNRLSKV*MMLLFR
Trigger: TCTGAAAAGCAGCATCATCCAAACCTTACTTAATCT...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTTTGGATTGTGTTCGATaGCAGTTCACAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSALDCVR*QFTSLQ
Trigger: TTGCAGGCTTGTGAACTGCCATCGAACACAATCCAA...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
3UTR CAA 72 bp GTACAAAGTCATTTGGAGCACAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VQSHLEHRGEIQ*ALECLVGKLGE
Trigger: CTCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGCTCCAAATGACTTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTGGTGCACAGAAATTTTaGGAGGAAGAACTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFGAQKF*EEELRN
Trigger: ATTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACC...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCGGCATGAGAATTGCTTaGACCCAAGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIGMRIA*TQEAEV
Trigger: AACCTCTGCCTCTTGGGTTCAAGCAATTCTCATGCC...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGTTGGAAGTAGGCTGGTaGTCACAGTACCTTATTGAT +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLELEVGW*SQYLID
Trigger: ATCAATAAGGTACTGTGATCACCAGCCTACTTCCAA...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTTTGGAAGTAGGCTGGTaGTCACAGTACCTTATTGAT +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFLEVGW*SQYLID
Trigger: ATCAATAAGGTACTGTGATCACCAGCCTACTTCCAA...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACAGTGAATTGTGTTATTaGGGATCAGACATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHSELCY*GSDMGN
Trigger: ATTTCCCATGTCTGATCCTCAATAACACAATTCACT...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTTCACATTCATGGCTGTaGAGTAGTAAGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLSHSWL*SSKNGK
Trigger: TTTCCCATTCTTACTACTTCACAGCCATGAATGTGA...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCAGGACTCACAGATTCTaGGATGGATGGAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSRTHRF*DGWNFF
Trigger: AAAGAAATTCCATCCATCTCAGAATCTGTGAGTCCT...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGGACTCACAGATTCTaGGATGGATGGAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLRTHRF*DGWNFF
Trigger: AAAGAAATTCCATCCATCTCAGAATCTGTGAGTCCT...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGAAGATGTTAGTAGAATaGGTGGATGATCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWKMLVE*VDDQTG
Trigger: GCCAGTCTGATCATCCACTCATTCTACTAACATCTT...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGATGGAGACCGAGTTTaGTATATAAATCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIDGDRV*YINQTC
Trigger: GCAAGTCTGATTTATATATCAAACTCGGTCTCCATC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGTTCACAAAGGGCCGATaGGCCTCAAACTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASEFTKGR*ASNSNS
Trigger: GGAGTTTGAGTTTGAGGCGCATCGGCCCTTTGTGAA...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGGCAATCATGCATACTaGCGGGTTCAACTTAGATAC +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMGNHAY*RVQLRY
Trigger: GTATCTAAGTTGAACCCGGCAGTATGCATGATTGCC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAAGAAAAAGGCAATCATaGATACTGCCGGGTTCAACT +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSRKRQS*ILPGST
Trigger: AGTTGAACCCGGCAGTATGCATGATTGCCTTTTTCT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCTATATAAATCAGACTTaGTTGGAAGTGCTTATCTCC +
Preference number: 4 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETYINQT*LEVLIS
Trigger: GGAGATAAGCACTTCCAAGCAAGTCTGATTTATATA...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTCCAGCTTATTTCAACTaGCTCTGTCTTTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVPAYFN*LCLLSC
Trigger: GCAGCTCAAAAGACAGAGGCAGTTGAAATAAGCTGG...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659826.1
CDS-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAATCAGACGCGTTTTCTTaGGCTGCCTCTTCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKSDAFS*AASSAF
Trigger: AAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGA...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCTGTTCTCAGATGGGATaGCAAGGTAGTCAGACGCGT +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQICSQMG*QGSQTR
Trigger: ACGCGTCTGACTACCTTGCCATCCCATCTGAGAACA...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQVLFLH*YRRVLL
Trigger: AAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAAC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGTTGGCTTCTCAGTTCTaGCAGAGTCTTATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQLASQF*QSLMVR
Trigger: ACGCACCATAAGACTCTGCCAGAACTGAGAAGCCAA...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTGGGGAGAAATCCAGTTaGCTTTGGAGTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSGEKSS*LWSVLL
Trigger: CAACAAGACACTCCAAAGCCAACTGGATTTCTCCCC...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGTTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLELYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGATGCACTCTCCTTTTaGAGGATATTTCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSDALSF*RIFQSH
Trigger: GTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTCATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTATTCAGAGGGATTGTGTaGAAAATTACCAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: RVQLRYTSYWATEENGVVFRGIV*KITNKK
Trigger: CTTCTTATTGGTAATTTTCCACACAATCCCTCTGAA...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTTCAGAGGGATTGTGTaGAAAATTACCAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: VVVSILLLPQAGGIHELWFRGIV*KITNKK
Trigger: CTTCTTATTGGTAATTTTCCACACAATCCCTCTGAA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCATGAGCTATGGGACTaGAAAAATTTCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFHELWD*KNFTLR
Trigger: CCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGCATGAGCTATGGGACTaGAAAAATTTCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEHELWD*KNFTLR
Trigger: CCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATG...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCAGATACACGAGCTATTaGGCCACCGAGGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIRYTSY*ATEENG
Trigger: ACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCT...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAAAAAGGAAGCAGCTATaGTCTAAGTGGAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRKRKQL*SKWKEN
Trigger: GTTCTCTTTCCACTTAGACCATAGCTGCTTCCTTTT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTAGGGGTGAGAGAAGATaGAGAACATTAGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIRGERR*RTLGQA
Trigger: TGCCTGTCCTAATGTTCTCCATCTTCTCTCACCCCT...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCAGCTGGCCTGGGATaGAGACCGAGTTTGATATAT +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSSAGLG*RPSLIY
Trigger: ATATATCAAACTCGGTCTCCATCCCAGGCCAGCTGA...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTAACATTTCCAGAGTTTaGATTGTGTTCGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPINISRV*IVFDGS
Trigger: ACTGCCATCGAACACAATCCAAACTCTGGAAATGTT...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTAAGTCACTTCAGTTGTaGGCAACAAAGTCACTTGTA +
Preference number: 4 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIKSLQL*ATKSLV
Trigger: TACAAGTGACTTTGTTGCCCACAACTGAAGTGACTT...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGCTGTGGCCTGGAGGTTaGGATTCCTGGATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASELWPGG*DSWILF
Trigger: AAAAAGGATCCAGGAATCCCAACCTCCAGGCCACAG...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
3UTR CAA 72 bp TTTTGGCCAATTTCTAGTCATCTGAATCTATCAGAGTaGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FWPISSHLNLSE*TSAQSVLVKEA
Trigger: TGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGACTAGAAATTGGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTGGTGCACAGAAATTTTaGGAGGAAGAACTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSGAQKF*EEELRN
Trigger: ATTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACC...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTTTTTCATTTACAAAATaGGGTGAGAGGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLFSFTK*GERKAS
Trigger: AGAAGCCTTCCTCTCACCTCATTTTGTAAATGAAAA...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCAGATACATTTGCAGTaGCTAGGTGAATTCACTGAA +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFQIHLQ*LGEFTE
Trigger: TTCAGTGAATTCACCTAGTCACTGCAAATGTATCTG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGATGGAGACCGAGTTTaGTATATAAATCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEDGDRV*YINQTC
Trigger: GCAAGTCTGATTTATATATCAAACTCGGTCTCCATC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR GCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTCGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFNISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTCCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTAGAAAAAGGCAATCATaGATACTGCCGGGTTCAACT +
Preference number: 4 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSRKRQS*ILPGST
Trigger: AGTTGAACCCGGCAGTATGCATGATTGCCTTTTTCT...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTAGAAAAAGGCAATCATaGATACTGCCGGGTTCAACT +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVRKRQS*ILPGST
Trigger: AGTTGAACCCGGCAGTATGCATGATTGCCTTTTTCT...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTTTCTTCCTGCAAAGATaGAGTGACACAGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIFFLQR*SDTAFS
Trigger: GGAAAAGGCTGTGTCACTGCATCTTTGCAGGAAGAA...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGCTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASELLVLR*DGKVVR
Trigger: TCTGACTACCTTGCCATCCCATCTGAGAACAAGGAG...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGATGCACTCTCCTTTTaGAGGATATTTCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMDALSF*RIFQSH
Trigger: GTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCATAGGCGAAGTATTTaGAAAGCACCTACCCATCCC +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIHRRSI*KAPTHP
Trigger: GGGATGGGTAGGTGCTTTCCAAATACTTCGCCTATG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 4 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 4 (lower is better)
Translates to: SSESIRVDLSPVRACERSEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAAAATGTGTTAACGGTCTaGTTTTGGGCCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKNVLTV*FWARHS
Trigger: ACTGTGCCTGGCCCAAAACCAGACCGTTAACACATT...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTATTCAGAGGGATTGTGTaGAAAATTACCAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: TSYWATEENGVVVSILLLFRGIV*KITNKK
Trigger: CTTCTTATTGGTAATTTTCCACACAATCCCTCTGAA...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACTTCAGAGGGATTGTGTaGAAAATTACCAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHFRGIV*KITNKK
Trigger: CTTCTTATTGGTAATTTTCCACACAATCCCTCTGAA...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTCATGAGCTATGGGACTaGAAAAATTTCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVHELWD*KNFTLR
Trigger: CCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATG...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTAGATTGAGCCAAGCTTaGCCTTTAGTGAATTGTGTT +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFRLSQA*PLVNCV
Trigger: AACACAATTCACTAAAGGCCAAGCTTGGCTCAATCT...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAATCAGCTGGCCTGGGATaGAGACCGAGTTTGATATAT +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKSAGLG*RPSLIY
Trigger: ATATATCAAACTCGGTCTCCATCCCAGGCCAGCTGA...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTTTGGATTGTGTTCGATaGCAGTTCACAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNILDCVR*QFTSLQ
Trigger: TTGCAGGCTTGTGAACTGCCATCGAACACAATCCAA...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGTTGGATTGTGTTCGATaGCAGTTCACAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQLDCVR*QFTSLQ
Trigger: TTGCAGGCTTGTGAACTGCCATCGAACACAATCCAA...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGGGAATCCAAGTTCATaGCACACTTTTGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQGNPSS*HTFALT
Trigger: GGTTAAAGCAAAAGTGTGTCATGAACTTGGATTCCC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTTTGGAAGTAGGCTGGTaGTCACAGTACCTTATTGAT +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNILEVGW*SQYLID
Trigger: ATCAATAAGGTACTGTGATCACCAGCCTACTTCCAA...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAAGTGAATTGTGTTATTaGGGATCAGACATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSSELCY*GSDMGN
Trigger: ATTTCCCATGTCTGATCCTCAATAACACAATTCACT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGAGTGAATTGTGTTATTaGGGATCAGACATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLESELCY*GSDMGN
Trigger: ATTTCCCATGTCTGATCCTCAATAACACAATTCACT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGAGGACTCACAGATTCTaGGATGGATGGAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMRTHRF*DGWNFF
Trigger: AAAGAAATTCCATCCATCTCAGAATCTGTGAGTCCT...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCATTTTCATTTACAAAATaGGGTGAGAGGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSFSFTK*GERKAS
Trigger: AGAAGCCTTCCTCTCACCTCATTTTGTAAATGAAAA...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTAAGATGTTAGTAGAATaGGTGGATGATCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIKMLVE*VDDQTG
Trigger: GCCAGTCTGATCATCCACTCATTCTACTAACATCTT...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 4 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTAATATCAGTCTCAGATaGACTCTCCTTTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVNISLR*TLLLED
Trigger: ATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAACCTCCCCTCTCACACTaGTCATTTACTTATGATCCA +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKPPLSH*SFTYDP
Trigger: TGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGG...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTAGAAAAAGGCAATCATaGATACTGCCGGGTTCAACT +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIRKRQS*ILPGST
Trigger: AGTTGAACCCGGCAGTATGCATGATTGCCTTTTTCT...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGTTGTACAAAGTCATTTaGAGCACAGGGGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQLYKVI*STGEKS
Trigger: GGATTTCTCCCCTGTGCTCCAAATGACTTTGTACAA...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTCACTTAAATTACCATTaGTCCTTCCCAAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIHLNYH*SFPSLL
Trigger: CAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTG...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CAATATATCATCTCGATGAGCAGCCACAAGGTGAGGAAGACCAGAAGGATGTACGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 4 (lower is better)
Translates to: QYIISMSSHKVRKTRRMYEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...GTACATCCTTCTGGTCTTCCTCACCTTGTGGCTGCTCATCGAGATGATATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR TCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAAGGTGCACAGAAATTTTaGGAGGAAGAACTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKGAQKF*EEELRN
Trigger: ATTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACC...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGTCACATTCATGGCTGTaGAGTAGTAAGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQSHSWL*SSKNGK
Trigger: TTTCCCATTCTTACTACTTCACAGCCATGAATGTGA...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTAAATCCAGTTGGCTTTaGAGTGTCTTGTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSKSSWL*SVLLEN
Trigger: GTTTTCCAACAAGACACTCCAAAGCCAACTGGATTT...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTGAAGGATGTCACACTTaGACCTGTCACTTAATTAAA +
Preference number: 4 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVEGCHT*TCHLIK
Trigger: TTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTC...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGTTCAGAGGGATTGTGTaGAAAATTACCAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEFRGIV*KITNKK
Trigger: CTTCTTATTGGTAATTTTCCACACAATCCCTCTGAA...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCATGAGCTATGGGACTaGAAAAATTTCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIHELWD*KNFTLR
Trigger: CCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGAACAGACATCTAGTCTaGGTCTTTCGTAGGATTATG +
Preference number: 4 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQNRHLV*VFRRIM
Trigger: CATAATCCTACGAAAGACCCAGACTAGATGTCTGTT...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CCA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAAGATTAAGTAAGGTTTaGATGATGCTGCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSRLSKV*MMLLFR
Trigger: TCTGAAAAGCAGCATCATCCAAACCTTACTTAATCT...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CCA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGAGATTAAGTAAGGTTTaGATGATGCTGCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLERLSKV*MMLLFR
Trigger: TCTGAAAAGCAGCATCATCCAAACCTTACTTAATCT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR TCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCAGGACTCACAGATTCTaGGATGGATGGAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIRTHRF*DGWNFF
Trigger: AAAGAAATTCCATCCATCTCAGAATCTGTGAGTCCT...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR TCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCCCAGCAGGGAATaGATTTATGTAATAAGAGAT +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSSPSRE*IYVIRD
Trigger: ATCTCTTATTACATAAATTCATTCCCTGCTGGGAGA...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR TCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGATTCACTCTGAGGACTaGATCTCCGCTTCATTATTT +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASEIHSED*ISASLF
Trigger: AAATAATGAAGCGGAGATTCAGTCCTCAGAGTGAAT...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR CCA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTAAAGCCCTAAACCTATaGAATATGGTCTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSKALNL*NMVFPY
Trigger: ATAGGGAAAGACCATATTCCATAGGTTTAGGGCTTT...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGTTCAGAGGGATTGTGTaGAAAATTACCAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMFRGIV*KITNKK
Trigger: CTTCTTATTGGTAATTTTCCACACAATCCCTCTGAA...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCAAAAGGAAGCAGCTATaGTCTAAGTGGAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIKRKQL*SKWKEN
Trigger: GTTCTCTTTCCACTTAGACCATAGCTGCTTCCTTTT...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
3UTR CAA 72 bp AAAGAGAACCAAAATAGGACTGACTCTCAAAGCACATaGCTAGCATCCACCAAAAAGCAAAGTGGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: KENQNRTDSQST*LASTKKQSGRE
Trigger: TTCTCTACCACTTTGCTTTTTGGTGGATGCTAGCAATGTGCTTTGAGAGTCAGTCCTATTTTGGTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAACGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 4 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR GCA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCGAACTAATCACTCCTaGTTCCTTCTATTAAGACTT +
Preference number: 4 (lower is better)
Translates to: NISLRCTLLLEDISESQIRTNHS*FLLLRL
Trigger: AAGTCTTAATAGAAGGAAGCAGGAGTGATTAGTTCG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR GCA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGTATATAAATCAGACTTaGTTGGAAGTGCTTATCTCC +
Preference number: 4 (lower is better)
Translates to: ISDRYHSASLKATQAASEYINQT*LEVLIS
Trigger: GGAGATAAGCACTTCCAAGCAAGTCTGATTTATATA...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS GCA 90 bp TCCACGTCGGTCCCGTCCACGCCCGCCCTCGGCTCCCTGGGGAGGTaGAGCGGGGCCGGGAAGGAAGCGGCAGCTCCCGTTCGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: STSVPSTPALGSLGR*SGAGKEAAAPVRPA
Trigger: CGCCGGCCGAACGGGAGCTGCCGCTTCCTTCCCGGCCCCGCTGCACCTCCCCAGGGAGCCGAGGGCGGGCGTGGACGGGACCGACGTGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS CCA 90 bp GAATGCGTTCCACGTCGGTCCCGTCCACGCCCGCCCTCGGCTCCCTaGGGAGGTGCAGCGGGGCCGGGAAGGAAGCGGCAGCTCCCGTTC +
Preference number: 5 (lower is better)
Translates to: ECVPRRSRPRPPSAP*GGAAGPGRKRQLPF
Trigger: GAACGGGAGCTGCCGCTTCCTTCCCGGCCCCGCTGCACCTCCCCAGGGAGCCGAGGGCGGGCGTGGACGGGACCGACGTGGAACGCATTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS GCA 90 bp CACCCCGGAACTCCAGCTTCCACTCGCGCCCCTGCCTCGCTCGTTTaGGCCCAGGGTAAGCTCAGCTCGGAAGGGAGTCGCACTGCTGGC +
Preference number: 5 (lower is better)
Translates to: HPGTPASTRAPASLV*AQGKLSSEGSRTAG
Trigger: GCCAGCAGTGCGACTCCCTTCCGAGCTGAGCTTACCCTGGGCGCAAACGAGCGAGGCAGGGGCGCGAGTGGAAGCTGGAGTTCCGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CCA 90 bp CGGCTTCCAAGGCTCTCGCCTCCCCAGGATCGGTTGCGTTCCGACTaGAATCCTCCCAGCCCCGCGGCTCCTGCTTCGTCCGCCCTAACT +
Preference number: 5 (lower is better)
Translates to: RLPRLSPPQDRLRSD*NPPSPAAPASSALT
Trigger: AGTTAGGGCGGACGAAGCAGGAGCCGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGGCGAGAGCCTTGGAAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000530277.5
ENST00000667790.1
CDS GCA 90 bp CCACCACCGTGGTGGCCTCCACCTCCTCTCTCTTCATGCAGGAGATaGAGCGCAGCTTCATGGGGTTGCCCTGCACGGCCTCCGTCTCCG +
Preference number: 5 (lower is better)
Translates to: PPPWWPPPPLSSCRR*SAASWGCPARPPSP
Trigger: CGGAGACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGCGCTGCATCTCCTGCATGAAGAGAGAGGAGGTGGAGGCCACCACGGTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS CCA 90 bp AGGTTGATTCACCTCTCGCCTCCCCAGGATCGGTTGCGTTCCGACTaGAATCCTCCCAGCCCCGCGGCTCCTGCTTCGTCCGCCCTAACT +
Preference number: 5 (lower is better)
Translates to: RLIHLSPPQDRLRSD*NPPSPAAPASSALT
Trigger: AGTTAGGGCGGACGAAGCAGGAGCCGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGGCGAGAGGTGAATCAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CAA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGCAGCAGAGGCAGCTCTaGCCAAGCCGTGACGCAGGG +
Preference number: 5 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLQQRQL*PSRDAG
Trigger: CCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCTG...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS TCA 90 bp AGTCGCACTGCTGGCCTAGCAGCCAGGCTGTGGAAGGGTCCAGGTTaGTTCACCTCTCGCCTCCCCAGGATCGGTTGCGTTCCGACTGGA +
Preference number: 5 (lower is better)
Translates to: SRTAGLAARLWKGPG*FTSRLPRIGCVPTG
Trigger: TCCAGTCGGAACGCAACCGATCCTGGGGAGGCGAGAGGTGAATCAACCTGGACCCTTCCACAGCCTGGCTGCTAGGCCAGCAGTGCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CCA 90 bp CTATGCACGAGGGTGTCTGGAGGCAAAAGCCCGAGAGAGCAGAGGTaGAGACGGCTGAGCACTGTGCTAAGGTCTGGCGGGCACCAACCA +
Preference number: 5 (lower is better)
Translates to: LCTRVSGGKSPREQR*RRLSTVLRSGGHQP
Trigger: TGGTTGGTGCCCGCCAGACCTTAGCACAGTGCTCAGCCGTCTCCACCTCTGCTCTCTCGGGCTTTTGCCTCCAGACACCCTCGTGCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS-3UTR CAA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGCGCAGCTTCATGGGGTaGCCCTGCACGGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVRSFMG*PCTASV
Trigger: GACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGCG...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS GCA 90 bp CTGGCAGACGAACTAGCTCAGCCTTGCCACACTTCCCACCAGCTATaGACGAGGGTGTCTGGAGGCAAAAGCCCGAGAGAGCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LADELAQPCHTSHQL*TRVSGGKSPREQRW
Trigger: CCACCTCTGCTCTCTCGGGCTTTTGCCTCCAGACACCCTCGTGCATAGCTGGTGGGAAGTGTGGCAAGGCTGAGCTAGTTCGTCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS-3UTR CAA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 5 (lower is better)
Translates to: RVQLRYTSYWATEENGVVEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 5 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGCAGCAGAGGCAGCTCTaGCCAAGCCGTGACGCAGGG +
Preference number: 5 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVQQRQL*PSRDAG
Trigger: CCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCTG...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS GCA 90 bp GTGAAGTCCTCTCCAGCCCTGCCGATCTCACACCTGCAAGGGTGCTaGAGAGGTGTCTACATCTGGAGGACGCCAATGTGGGCGATTCTG +
Preference number: 5 (lower is better)
Translates to: VKSSPALPISHLQGC*RGVYIWRTPMWAIL
Trigger: CAGAATCGCCCACATTGGCGTCCTCCAGATGTAGACACCTCTGCAGCACCCTTGCAGGTGTGAGATCGGCAGGGCTGGAGAGGACTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS GCA 90 bp GAGGTGAAGTCCTCTCCAGCCCTGCCGATCTCACACCTGCAAGGGTaGTGCAGAGGTGTCTACATCTGGAGGACGCCAATGTGGGCGATT +
Preference number: 5 (lower is better)
Translates to: EVKSSPALPISHLQG*CRGVYIWRTPMWAI
Trigger: AATCGCCCACATTGGCGTCCTCCAGATGTAGACACCTCTGCAGCACCCTTGCAGGTGTGAGATCGGCAGGGCTGGAGAGGACTTCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS CCA 90 bp ACGAGAGAAGCCAGGGGAAACAATCTATTGAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGGCTCTCGCCTCCCCAGGATCGGTTG +
Preference number: 5 (lower is better)
Translates to: TREARGNNLLKAGIF*GWRLPRLSPPQDRL
Trigger: CAACCGATCCTGGGGAGGCGAGAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCCTGGCTTCTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000530277.5
ENST00000667790.1
CDS CCA 90 bp AATCTTTACCGCCCTCGGGCCTGTAGAACCATTCCACCACCGTGGTaGCCTCCACCTCCTCTCTCTTCATGCAGGAGATGCAGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: NLYRPRACRTIPPPW*PPPPLSSCRRCSAA
Trigger: AGCTGCGCTGCATCTCCTGCATGAAGAGAGAGGAGGTGGAGGCCACCACGGTGGTGGAATGGTTCTACAGGCCCGAGGGCGGTAAAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS CCA 90 bp GGAAATCTTTACCGCCCTCGGGCCTGTAGAACCATTCCACCACCGTaGTGGCCTCCACCTCCTCTCTCTTCATGCAGGAGATGCAGCGCA +
Preference number: 5 (lower is better)
Translates to: GNLYRPRACRTIPPP*WPPPPLSSCRRCSA
Trigger: TGCGCTGCATCTCCTGCATGAAGAGAGAGGAGGTGGAGGCCACCACGGTGGTGGAATGGTTCTACAGGCCCGAGGGCGGTAAAGATTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS CCA 90 bp TCGGTCAAGGACTGCGCCCTCTCAGATTCTTTCGAGGAAACCCTTTaGGACGAACTGCCCCCAGGGGGCGACTTTCTGACCGAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SVKDCALSDSFEETL*DELPPGGDFLTEGR
Trigger: CCTTCCTTCGGTCAGAAAGTCGCCCCCTGGGGGCAGTTCGTCCCAAAGGGTTTCCTCGAAAGAATCTGAGAGGGCGCAGTCCTTGACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CAA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGCAGCAGAGGCAGCTCTaGCCAAGCCGTGACGCAGGG +
Preference number: 5 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVQQRQL*PSRDAG
Trigger: CCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCTG...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACAGGCCCTGGGAGCTTTaGGAGCCGGGTGGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNRPWEL*EPGGGF
Trigger: AAAGCCCCCACCCGGCTCCAAAAGCTCCCAGGGCCT...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CAA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGCGCAGCTTCATGGGGTaGCCCTGCACGGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWRSFMG*PCTASV
Trigger: GACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGCG...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGACGCAGCTTCATGGGGTaGCCCTGCACGGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGRSFMG*PCTASV
Trigger: GACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGCG...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 5 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRREAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 5 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 5 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGCCGGGTGGGGGCTTaGGGCCCTAAGCGACCCCAC +
Preference number: 5 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLSRVGA*GPKRPH
Trigger: GTGGGGTCGCTTAGGGCCCAAAGCCCCCACCCGGCT...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CAA 90 bp TGTTCAGGCCACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTGGTACCGCCTCCCCAGGATCGGTaGCGTTCCGACTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: CSGHLMSHCSCSIPPLVPPPQDR*RSDWNP
Trigger: AGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGG...CGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGTGGCCTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR CAA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTCAGACGCGTTTTCTaGGGCTGCCTCTTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQVRRVF*GCLFGF
Trigger: AAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGAC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS TCA 90 bp TCTGGATTTTCACCCTGCTTCCAGCGCGAATTTGCTGCACGTCCCTaGGCAAGCCCCTTGCTCTTGCAGAGAACTCTGTTCTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SGFSPCFQREFAARP*ASPLLLQRTLFSQP
Trigger: TGGCTGGGAGAACAGAGTTCTCTGCAAGAGCAAGGGGCTTGCTCAGGGACGTGCAGCAAATTCGCGCTGGAAGCAGGGTGAAAATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS GCA 90 bp TGGCGGCTTCCAAGGCTACACAGAGAGATTCCCTCGGTCAAGGACTaGGCCCTCTCAGATTCTTTCGAGGAAACCCTTTGGGACGAACTG +
Preference number: 5 (lower is better)
Translates to: WRLPRLHREIPSVKD*ALSDSFEETLWDEL
Trigger: CAGTTCGTCCCAAAGGGTTTCCTCGAAAGAATCTGAGAGGGCGCAGTCCTTGACCGAGGGAATCTCTCTGTGTAGCCTTGGAAGCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CCA 90 bp GAAGCCAGGGGAAACAATCTATTGAAGGCAGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCTACACAGAGAGATTCCCTCGGTCAAGGAC +
Preference number: 5 (lower is better)
Translates to: EARGNNLLKAGIFWG*RLPRLHREIPSVKD
Trigger: GTCCTTGACCGAGGGAATCTCTCTGTGTAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCCTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CCA 90 bp ACGAGAGAAGCCAGGGGAAACAATCTATTGAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGGCTACACAGAGAGATTCCCTCGGTC +
Preference number: 5 (lower is better)
Translates to: TREARGNNLLKAGIF*GWRLPRLHREIPSV
Trigger: GACCGAGGGAATCTCTCTGTGTAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCCTGGCTTCTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CCA 90 bp CTGCCGATCTCACACCTGCAAGGGTGCTGCAGAGGTGTCTACATCTaGAGGACGCCAATGTGGGCGATTCTGATGTCTGCCCTTTATCCA +
Preference number: 5 (lower is better)
Translates to: LPISHLQGCCRGVYI*RTPMWAILMSALYP
Trigger: TGGATAAAGGGCAGACATCAGAATCGCCCACATTGGCGTCCTCCAGATGTAGACACCTCTGCAGCACCCTTGCAGGTGTGAGATCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS CCA 90 bp AACTTGAACAAAGAGAACCAGGGAGACCTTGTGGGACCACAGGAATaGAGGAGATGTGGGGTTGATGGGCAGGTGTCATGGTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: NLNKENQGDLVGPQE*RRCGVDGQVSWWGG
Trigger: CCCACCCCACCATGACACCTGCCCATCAACCCCACATCTCCTCCATTCCTGTGGTCCCACAAGGTCTCCCTGGTTCTCTTTGTTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 90 bp GCCAGGGAAGAGGGAGTGGGATGCCTGGAAGAAGTAGCCGAGCAGTaGAAGGAATCCTGGCCTCAAAGTGAGATATCTAGAGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: AREEGVGCLEEVAEQ*KESWPQSEISRAGC
Trigger: ACAGCCAGCTCTAGATATCTCACTTTGAGGCCAGGATTCCTTCCACTGCTCGGCTACTTCTTCCAGGCATCCCACTCCCTCTTCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS-3UTR CAA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTCGCAGCTTCATGGGGTaGCCCTGCACGGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSARSFMG*PCTASV
Trigger: GACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGCG...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCACGTCCTGCAGGTCCTaGCTGCCATTCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETTSCRS*LPFHCR
Trigger: CCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACGT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTGAAGCGATGGGGCCCTaGGGGCGCCCTCCTGATGCC +
Preference number: 5 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSEAMGP*GRPPDA
Trigger: GGCATCAGGAGGGCGCCCCAAGGGCCCCATCGCTTC...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLRGEIQ*ALECLV
Trigger: AACAAGACACTCCAAAGCCAACTGGATTTCTCCCCT...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGCCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACC +
Preference number: 5 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQPVLVF*EGTLET
Trigger: GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGG...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAAACTGCCTCTGTCTTTaGAGCTGCCGGTGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGNCLCL*SCRWWR
Trigger: CCTCCACCACCGGCAGCTCAAAAGACAGAGGCAGTT...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659826.1
CDS-3UTR CAA 90 bp GCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCATGCCCCACACTTaGGCCTGCTCACTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ALLMPLTLLNMGCPVPQVFMPHT*ACSLAV
Trigger: CACTGCTAGTGAGCAGGCCAAAGTGTGGGGCATGAA...CACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS CCA 90 bp ACGAGAGAAGCCAGGGGAAACAATCTATTGAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGGCTGTTCCTGTCTTCACCTCATCAC +
Preference number: 5 (lower is better)
Translates to: TREARGNNLLKAGIF*GWRLPRLFLSSPHH
Trigger: GTGATGAGGTGAAGACAGGAACAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCCTGGCTTCTCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657123.1
CDS-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACCCTCCCCAGGATCGGTaGCGTTCCGACTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHPPQDR*RSDWNP
Trigger: AGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGG...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CAA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTACGTCCTGCAGGTCCTaGCTGCCATTCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLITSCRS*LPFHCR
Trigger: CCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACGT...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGTCAGACGCGTTTTCTaGGGCTGCCTCTTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: WATEENGVVVSILLLPQAVRRVF*GCLFGF
Trigger: AAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGAC...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGCTGAGGTGGGAGGATaGCTTAAACCTGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGAEVGG*LKPGAV
Trigger: AACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAGC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCTTTCGAGGAAACCCTTaGGGACGAACTGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETFRGNP*GRTAPR
Trigger: CCTGGGGGCAGTTCGTCCCAAAGGGTTTCCTCGAAA...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CAA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGATGGGCAAGTTCAGATaGCCTCGACACTCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQMGKFR*PRHSGQ
Trigger: TTGACCTGAGTGTCGAGGCAATCTGAACTTGCCCAT...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS TCA 90 bp AAAGGTATTCCAAATCCTGACTCTCCCGCCCATTGGCTTTCTCACTaGCTGTCATCAGCTGCTCAGGAGCCAGGGAAGAGGGAGTGGGAT +
Preference number: 5 (lower is better)
Translates to: KGIPNPDSPAHWLSH*LSSAAQEPGKREWD
Trigger: ATCCCACTCCCTCTTCCCTGGCTCCTGAGCAGCTGATGACAGTCAGTGAGAAAGCCAATGGGCGGGAGAGTCAGGATTTGGAATACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS GCA 90 bp AATCACCTGGGGAGTCATCAACTTGCATATGACCTCACTCACCCCTaGCGATCTCACACCTGCAAGGGTGCTGCAGAGGTGTCTACATCT +
Preference number: 5 (lower is better)
Translates to: NHLGSHQLAYDLTHP*RSHTCKGAAEVSTS
Trigger: AGATGTAGACACCTCTGCAGCACCCTTGCAGGTGTGAGATCGGCAGGGGTGAGTGAGGTCATATGCAAGTTGATGACTCCCCAGGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS GCA 90 bp AGGCGAACAATCTGGATTTTCACCCTGCTTCCAGCGCGAATTTGCTaGACGTCCCTGAGCAAGCCCCTTGCTCTTGCAGAGAACTCTGTT +
Preference number: 5 (lower is better)
Translates to: RRTIWIFTLLPARIC*TSLSKPLALAENSV
Trigger: AACAGAGTTCTCTGCAAGAGCAAGGGGCTTGCTCAGGGACGTGCAGCAAATTCGCGCTGGAAGCAGGGTGAAAATCCAGATTGTTCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 90 bp GGAAAGAAACAGTGGAAAGCAAGCCCTCCAGACAGGCGAACAATCTaGATTTTCACCCTGCTTCCAGCGCGAATTTGCTGCACGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GKKQWKASPPDRRTI*IFTLLPARICCTSL
Trigger: CAGGGACGTGCAGCAAATTCGCGCTGGAAGCAGGGTGAAAATCCAGATTGTTCGCCTGTCTGGAGGGCTTGCTTTCCACTGTTTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 90 bp GGTCAGCTGGCCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGATGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: GQLASCHTAPVLFLH*YRRVLLVLRWDGKV
Trigger: TACCTTGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGCCAGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS-3UTR CAA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGAACGTCCTGCAGGTCCTaGCTGCCATTCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRTSCRS*LPFHCR
Trigger: CCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACGT...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTCGTTCAGAGTGACGTaGAGCACAGTGATGGACACG +
Preference number: 5 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVSFRVT*STVMDT
Trigger: CGTGTCCATCACTGTGCTCAACGTCACTCTGAACGA...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 5 (lower is better)
Translates to: WATEENGVVVSILLLPQAALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCCAAGTCTCCTGTCCTaGTCTTCTTGGAGGGAACCT +
Preference number: 5 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNPSLLS*SSWREP
Trigger: AGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ACAAGCCTGCAAGCACTCGGCCTTCAGCGGCCTCCGTCTCCATCACACACACTGGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: TSLQALGLQRPPSPSHTLVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...CAGTGTGTGTGATGGAGACGGAGGCCGCTGAAGGCCGAGTGCTTGCAGGCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATGCTGAGGTGGGAGGATaGCTTAAACCTGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHAEVGG*LKPGAV
Trigger: AACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAGC...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTCAGCAGAGGCAGCTCTaGCCAAGCCGTGACGCAGGG +
Preference number: 5 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVQQRQL*PSRDAG
Trigger: CCCTGCGTCACGGCTTGGCAAGAGCTGCCTCTGCTG...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS TCA 90 bp CAGCCACAAGGTGAGGAAGACCAGAAGGATGTACATCATGATTTCTaGGACCACAGAGGTGAAGTCCTCTCCAGCCTCCTCGGTGACTCT +
Preference number: 5 (lower is better)
Translates to: QPQGEEDQKDVHHDF*DHRGEVLSSLLGDS
Trigger: AGAGTCACCGAGGAGGCTGGAGAGGACTTCACCTCTGTGGTCTCAGAAATCATGATGTACATCCTTCTGGTCTTCCTCACCTTGTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
CDS TCA 90 bp CAGCCACAAGGTGAGGAAGACCAGAAGGATGTACATCATGATTTCTaGGACCACAGAGGTGAAGTCCTCTCCAGCCCTGCCGATCTCACA +
Preference number: 5 (lower is better)
Translates to: QPQGEEDQKDVHHDF*DHRGEVLSSPADLT
Trigger: TGTGAGATCGGCAGGGCTGGAGAGGACTTCACCTCTGTGGTCTCAGAAATCATGATGTACATCCTTCTGGTCTTCCTCACCTTGTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS GCA 90 bp GCTCCAGGATCACCCAGGTTTCCAACTGGAGCTAGAGGTCATAGATaGAGCGTGAGGCACATGAGAATGCCGTACAGCTCAAACATCTCA +
Preference number: 5 (lower is better)
Translates to: APGSPRFPTGARGHR*SVRHMRMPYSSNIS
Trigger: TGAGATGTTTGAGCTGTACGGCATTCTCATGTGCCTCACGCTGCATCTATGACCTCTAGCTCCAGTTGGAAACCTGGGTGATCCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS-3UTR CAA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGCCTCCCCAGGATCGGTaGCGTTCCGACTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWPPQDR*RSDWNP
Trigger: AGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGG...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299333.8
ENST00000392770.6
CDS-3UTR CAA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCGCAGCTTCATGGGGTaGCCCTGCACGGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: NISLRCTLLLEDISESQIRSFMG*PCTASV
Trigger: GACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGCG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTACGTCCTGCAGGTCCTaGCTGCCATTCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSATSCRS*LPFHCR
Trigger: CCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACGT...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGACGTCCTGCAGGTCCTaGCTGCCATTCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLETSCRS*LPFHCR
Trigger: CCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACGT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATTCGTTCAGAGTGACGTaGAGCACAGTGATGGACACG +
Preference number: 5 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHSFRVT*STVMDT
Trigger: CGTGTCCATCACTGTGCTCAACGTCACTCTGAACGA...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTCGTTCAGAGTGACGTaGAGCACAGTGATGGACACG +
Preference number: 5 (lower is better)
Translates to: VVVSILLLPQAGGIHELWSFRVT*STVMDT
Trigger: CGTGTCCATCACTGTGCTCAACGTCACTCTGAACGA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGTCAGACGCGTTTTCTaGGGCTGCCTCTTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIVRRVF*GCLFGF
Trigger: AAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGAC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAAACCGCAGAGTTCTCCTaGTTCTCAGATGGGATGGCA +
Preference number: 5 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKTAEFS*FSDGMA
Trigger: TGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGT...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCACCGCAGAGTTCTCCTaGTTCTCAGATGGGATGGCA +
Preference number: 5 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETTAEFS*FSDGMA
Trigger: TGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACCAAGTCTCCTGTCCTaGTCTTCTTGGAGGGAACCT +
Preference number: 5 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKPSLLS*SSWREP
Trigger: AGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGCCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGTTTCCAGAGTTTGGATaGTGTTCGATGGCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQFPEFG*CSMAVH
Trigger: GTGAACTGCCATCGAACACAATCCAAACTCTGGAAA...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGAACATTTCCAGAGTTaGGATTGTGTTCGATGGCAG +
Preference number: 5 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQEHFQS*DCVRWQ
Trigger: CTGCCATCGAACACAATCCAAACTCTGGAAATGTTC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCAGTGGAAGGGTCCAGGTaGATTCACCTCTCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSVEGSR*IHLSPP
Trigger: GGGAGGCGAGAGGTGAATCAACCTGGACCCTTCCAC...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS-3UTR CAA 90 bp AGATTGCCTCGACACTCAGGTCAAAGCAGTTCACCTTCCGAAGCGCTGACATCAGACCAAAGAAGGGAGTaGGAGAATCCTGTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: RLPRHSGQSSSPSEALTSDQRRE*ENPVPL
Trigger: CAGAGGCACAGGATTCTCCAACTCCCTTCTTTGGTC...TGATGTCAGCGCTTCGGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CAA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATGATGCAGGACTCCGGTaGCAACAGAAACACCTGAGT +
Preference number: 5 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHDAGLR*QQKHLS
Trigger: ACTCAGGTGTTTCTGTTGCAACCGGAGTCCTGCATC...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR CAA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGTCGTTCAGAGTGACGTaGAGCACAGTGATGGACACG +
Preference number: 5 (lower is better)
Translates to: RVDLSPVRACERSIAIDKSFRVT*STVMDT
Trigger: CGTGTCCATCACTGTGCTCAACGTCACTCTGAACGA...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACCTGCCTCTTCGGCTTTaGAGACCTTTCTGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNLPLRL*RPFCSN
Trigger: ATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAG...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTGTCAGACGCGTTTTCTaGGGCTGCCTCTTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: ITIGPSQVSCPCLLGGNLVRRVF*GCLFGF
Trigger: AAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGAC...AAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAACCGCAGAGTTCTCCTaGTTCTCAGATGGGATGGCA +
Preference number: 5 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGTAEFS*FSDGMA
Trigger: TGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGT...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 5 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 5 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNRGEIQ*ALECLV
Trigger: AACAAGACACTCCAAAGCCAACTGGATTTCTCCCCT...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACCCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACC +
Preference number: 5 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHPVLVF*EGTLET
Trigger: GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGG...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACCCAAGTCTCCTGTCCTaGTCTTCTTGGAGGGAACCT +
Preference number: 5 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHPSLLS*SSWREP
Trigger: AGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGG...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGCTGAATCTATCAGAGTaGACCTCAGCCCAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: RVDLSPVRACERSIAIDKLNLSE*TSAQSV
Trigger: CACGGACTGGGCTGAGGTCAACTCTGATAGATTCAG...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCTGTTCTATTCCTCCACTGGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGATCTGAATCTATCAGAGTaGACCTCAGCCCAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: PVLFLHWYRRVLLVLRWDLNLSE*TSAQSV
Trigger: CACGGACTGGGCTGAGGTCAACTCTGATAGATTCAG...ATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGCGCCCTCCTGATGCCATTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGAGATGCACTCTCCTTTaGGAGGATATTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: GALLMPLTLLNMGCPVPQRCTLL*EDISES
Trigger: TGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCT...CTGAGGGACTGGACATCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATCCTTCCCCAGGTTCTTaGCAGTTCTCCCTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHPSPGS*QFSLFL
Trigger: AAGGAAAAGGGAGAACTGCAAAGAACCTGGGGAAGG...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657123.1
CDS-3UTR CAA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTACGTCCTGCAGGTCCTaGCTGCCATTCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSTSCRS*LPFHCR
Trigger: CCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACGT...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCTCGTTCAGAGTGACGTaGAGCACAGTGATGGACACG +
Preference number: 5 (lower is better)
Translates to: SSESIRVDLSPVRACERSSFRVT*STVMDT
Trigger: CGTGTCCATCACTGTGCTCAACGTCACTCTGAACGA...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATCTGCCTCTTCGGCTTTaGAGACCTTTCTGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHLPLRL*RPFCSN
Trigger: ATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAG...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AGATTGCCTCGACACTCAGGTCAAAGCAGTTCACCTTCCGAAGCGCTGACATCACTGCCTCTTCGGCTTTaGAGACCTTTCTGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: RLPRHSGQSSSPSEALTSLPLRL*RPFCSN
Trigger: ATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAG...TGATGTCAGCGCTTCGGAAGGTGAACTGCTTTGACCTGAGTGTCGAGGCAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CAA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: RVQLRYTSYWATEENGVVRGEIQ*ALECLV
Trigger: AACAAGACACTCCAAAGCCAACTGGATTTCTCCCCT...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGACTGAATCTATCAGAGTaGACCTCAGCCCAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRLNLSE*TSAQSV
Trigger: CACGGACTGGGCTGAGGTCAACTCTGATAGATTCAG...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTGCTGAGGTGGGAGGATaGCTTAAACCTGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFAEVGG*LKPGAV
Trigger: AACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAGC...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGCTGAGGTGGGAGGATaGCTTAAACCTGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEAEVGG*LKPGAV
Trigger: AACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAGC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLEVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CAATATATCATCTCGATGAGCAGCCACAAGGTGAGGAAGACCAGAAGGATGTACGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: QYIISMSSHKVRKTRRMYVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...GTACATCCTTCTGGTCTTCCTCACCTTGTGGCTGCTCATCGAGATGATATATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ACTGCCGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGGACTCTCAAAGCACATaGCTAGCATCCACCAAAAAG +
Preference number: 5 (lower is better)
Translates to: TAGFNLDTRAIGPPRKTVDSQST*LASTKK
Trigger: CTTTTTGGTGGATGCTAGCAATGTGCTTTGAGAGTC...CACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCGGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GAGGAAGAACTCAGGAATTTCAGTCCTAATGCCCAGGTGGTGTGCCCACAGGGAGACTCTCAAAGCACATaGCTAGCATCCACCAAAAAG +
Preference number: 5 (lower is better)
Translates to: EEELRNFSPNAQVVCPQGDSQST*LASTKK
Trigger: CTTTTTGGTGGATGCTAGCAATGTGCTTTGAGAGTC...TCCCTGTGGGCACACCACCTGGGCATTAGGACTGAAATTCCTGAGTTCTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTTCAGGGCCAACTGGATaGAGCAATCACATTCATGGC +
Preference number: 5 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLISGPTG*SNHIHG
Trigger: GCCATGAATGTGATTGCTCAATCCAGTTGGCCCTGA...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGTCAGGGCCAACTGGATaGAGCAATCACATTCATGGC +
Preference number: 5 (lower is better)
Translates to: RVDLSPVRACERSIAIDKSGPTG*SNHIHG
Trigger: GCCATGAATGTGATTGCTCAATCCAGTTGGCCCTGA...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGAACATTTCCAGAGTTaGGATTGTGTTCGATGGCAG +
Preference number: 5 (lower is better)
Translates to: WATEENGVVVSILLLPQAEHFQS*DCVRWQ
Trigger: CTGCCATCGAACACAATCCAAACTCTGGAAATGTTC...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGGGCAACAAAGTCACTaGTACAACCTGCCATCCACA +
Preference number: 5 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHGQQSH*YNLPST
Trigger: TGTGGATGGCAGGTTGTACAAGTGACTTTGTTGCCC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS TCA 90 bp GATTCTGATGTCTGCCCTTTATCCAGAGGCCCTGGATTAAATAAATaGTATCCACGCTTCCTTCACACCCGACCATCCACGAGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: DSDVCPLSRGPGLNK*YPRFLHTRPSTRLC
Trigger: ACAGAGCCTCGTGGATGGTCGGGTGTGAAGGAAGCGTGGATATCATTTATTTAATCCAGGGCCTCTGGATAAAGGGCAGACATCAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS-3UTR CAA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCCTCCCCAGGATCGGTaGCGTTCCGACTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: NISLRCTLLLEDISESQIPPQDR*RSDWNP
Trigger: AGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000667790.1
CDS-3UTR CAA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTAAGGGGAAACAATCTATaGAAGGCAGGCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: TSYWATEENGVVVSILLLRGNNL*KAGIFW
Trigger: CCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCCT...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGTCGTTCAGAGTGACGTaGAGCACAGTGATGGACACG +
Preference number: 5 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLESFRVT*STVMDT
Trigger: CGTGTCCATCACTGTGCTCAACGTCACTCTGAACGA...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTCTGCCTCTTCGGCTTTaGAGACCTTTCTGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLILPLRL*RPFCSN
Trigger: ATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAG...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGACCGCAGAGTTCTCCTaGTTCTCAGATGGGATGGCA +
Preference number: 5 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLETAEFS*FSDGMA
Trigger: TGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TGTTCAGGCCACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTGGTACCGGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: CSGHLMSHCSCSIPPLVPEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...CGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGTGGCCTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAGGGGAGAAATCCAGTaGGCTTTGGAGTGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIRGEIQ*ALECLV
Trigger: AACAAGACACTCCAAAGCCAACTGGATTTCTCCCCT...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 5 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKLVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACC +
Preference number: 5 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFPVLVF*EGTLET
Trigger: GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGCTGAGGTGGGAGGATaGCTTAAACCTGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMAEVGG*LKPGAV
Trigger: AACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAGC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGTTAACGGTCTGGTTTaGGGCCAGGCACAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMVNGLV*GQAQLL
Trigger: GAGCAACTGTGCCTGGCCCAAAACCAGACCGTTAAC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CACCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTGGTACCGCAGAGTTCTGACTCTCAAAGCACATaGCTAGCATCCACCAAAAAG +
Preference number: 5 (lower is better)
Translates to: HLMSHCSCSIPPLVPQSSDSQST*LASTKK
Trigger: CTTTTTGGTGGATGCTAGCAATGTGCTTTGAGAGTC...AGAACTCTGCGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACAGATTGAGCCAAGCTaGGCCTTTAGTGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKQIEPS*AFSELC
Trigger: ACACAATTCACTAAAGGCCAAGCTTGGCTCAATCTG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGCAGATTGAGCCAAGCTaGGCCTTTAGTGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: VVVSILLLPQAGGIHELWQIEPS*AFSELC
Trigger: ACACAATTCACTAAAGGCCAAGCTTGGCTCAATCTG...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACAGATTGAGCCAAGCTaGGCCTTTAGTGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: RVQLRYTSYWATEENGVVQIEPS*AFSELC
Trigger: ACACAATTCACTAAAGGCCAAGCTTGGCTCAATCTG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp TGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACCGCAAGCTATAAATCAGACTTGCTaGGAAGTGCTTATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: WATEENGVVVSILLLPQAINQTC*EVLISC
Trigger: GCAGGAGATAAGCACTTCCAAGCAAGTCTGATTTAT...AGCTTGCGGTAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp GGTGGTGTGCCCACAGGGAGGGCACACATACATTATCGCAATAGGATCAGGAACATAAATCAGACTTGCTaGGAAGTGCTTATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GGVPTGRAHIHYRNRIRNINQTC*EVLISC
Trigger: GCAGGAGATAAGCACTTCCAAGCAAGTCTGATTTAT...GTTCCTGATCCTATTGCGATAATGTATGTGTGCCCTCCCTGTGGGCACACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS TCA 90 bp CAGCCACAAGGTGAGGAAGACCAGAAGGATGTACATCATGATTTCTaGGACCACAGAGGTGAAGTCCTCTCCAGCTTATTTCAACTGCCT +
Preference number: 5 (lower is better)
Translates to: QPQGEEDQKDVHHDF*DHRGEVLSSLFQLP
Trigger: AGGCAGTTGAAATAAGCTGGAGAGGACTTCACCTCTGTGGTCTCAGAAATCATGATGTACATCCTTCTGGTCTTCCTCACCTTGTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659826.1
CDS TCA 90 bp GCATCTCTGGACTTACGCGTTTTCTTGGGCTGCCTCTTCGGCTTTTaGGACCTTTCTGTAGCAATATATCATCTCGATGAGCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: ASLDLRVFLGCLFGF*DLSVAIYHLDEQPQ
Trigger: TTGTGGCTGCTCATCGAGATGATATATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTAAGTCCAGAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS CCA 90 bp GATAATAAACTTGTTTTTCCTTCTGTTTTTACCCGAGGCTTGCTCTaGTACCTGGCAGACGAACTAGCTCAGCCTTGCCACACTTCCCAC +
Preference number: 5 (lower is better)
Translates to: DNKLVFPSVFTRGLL*YLADELAQPCHTSH
Trigger: GTGGGAAGTGTGGCAAGGCTGAGCTAGTTCGTCTGCCAGGTACCAGAGCAAGCCTCGGGTAAAAACAGAAGGAAAAACAAGTTTATTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS-3UTR CAA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGACTGCCTCTTCGGCTTTaGAGACCTTTCTGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRLPLRL*RPFCSN
Trigger: ATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAG...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTGTCAGACGCGTTTTCTaGGGCTGCCTCTTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSVRRVF*GCLFGF
Trigger: AAAGCCGAAGAGGCAGCCCAAGAAAACGCGTCTGAC...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTACCGCAGAGTTCTCCTaGTTCTCAGATGGGATGGCA +
Preference number: 5 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVTAEFS*FSDGMA
Trigger: TGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGT...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGACCGCAGAGTTCTCCTaGTTCTCAGATGGGATGGCA +
Preference number: 5 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMTAEFS*FSDGMA
Trigger: TGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGT...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 5 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGCCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACCCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: RVQLRYTSYWATEENGVVVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTGACATTGCTGAACATGGGATGTCCAGTCCCTCAGGTGTTCAGGCCACCTCATTGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 5 (lower is better)
Translates to: LTLLNMGCPVPQVFRPPHWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...ATGAGGTGGCCTGAACACCTGAGGGACTGGACATCCCATGTTCAGCAATGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGTGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 5 (lower is better)
Translates to: VVVSILLLPQAGGIHELWWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTCTGAATCTATCAGAGTaGACCTCAGCCCAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVLNLSE*TSAQSV
Trigger: CACGGACTGGGCTGAGGTCAACTCTGATAGATTCAG...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp TTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCAGATGCACTCTCCTTTaGGAGGATATTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LVLPKSPVLVFLEGTLETRCTLL*EDISES
Trigger: TGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCT...GGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGACTCTCAAAGCACATaGCTAGCATCCACCAAAAAG +
Preference number: 5 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHDSQST*LASTKK
Trigger: CTTTTTGGTGGATGCTAGCAATGTGCTTTGAGAGTC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGGACTCTCAAAGCACATaGCTAGCATCCACCAAAAAG +
Preference number: 5 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWDSQST*LASTKK
Trigger: CTTTTTGGTGGATGCTAGCAATGTGCTTTGAGAGTC...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTGACTCTCAAAGCACATaGCTAGCATCCACCAAAAAG +
Preference number: 5 (lower is better)
Translates to: PLLSLGAEGCHTWTCHLIDSQST*LASTKK
Trigger: CTTTTTGGTGGATGCTAGCAATGTGCTTTGAGAGTC...AATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGCAGATTGAGCCAAGCTaGGCCTTTAGTGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: RVDLSPVRACERSIAIDKQIEPS*AFSELC
Trigger: ACACAATTCACTAAAGGCCAAGCTTGGCTCAATCTG...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGTCAGGGCCAACTGGATaGAGCAATCACATTCATGGC +
Preference number: 5 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLESGPTG*SNHIHG
Trigger: GCCATGAATGTGATTGCTCAATCCAGTTGGCCCTGA...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTTCAGGGCCAACTGGATaGAGCAATCACATTCATGGC +
Preference number: 5 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFSGPTG*SNHIHG
Trigger: GCCATGAATGTGATTGCTCAATCCAGTTGGCCCTGA...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp ATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACACTTGGTTTCCAGAGTTTGGATaGTGTTCGATGGCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: IKHLSPLLSLGAEGCHTWFPEFG*CSMAVH
Trigger: GTGAACTGCCATCGAACACAATCCAAACTCTGGAAA...CCAAGTGTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp TGTCCTTGTCTTCTTGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGATTTCCAGAGTTTGGATaGTGTTCGATGGCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: CPCLLGGNLRDPSGSSSGFPEFG*CSMAVH
Trigger: GTGAACTGCCATCGAACACAATCCAAACTCTGGAAA...TCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS GCA 90 bp ACCTCTCCCCTTGCCAGCTCTCAACAGCAAGTCAGATTTATGATCTaGAGTTATCCATTGGATCTAAGTCATCCCCAAGTCCTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: TSPLASSQQQVRFMI*SYPLDLSHPQVLGC
Trigger: ACAACCAAGGACTTGGGGATGACTTAGATCCAATGGATAACTGCAGATCATAAATCTGACTTGCTGTTGAGAGCTGGCAAGGGGAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS-3UTR CAA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCGTTCAGAGTGACGTaGAGCACAGTGATGGACACG +
Preference number: 5 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSSFRVT*STVMDT
Trigger: CGTGTCCATCACTGTGCTCAACGTCACTCTGAACGA...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGCCTCTTCGGCTTTaGAGACCTTTCTGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFLPLRL*RPFCSN
Trigger: ATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TCATCTGAATCTATCAGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCCTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 5 (lower is better)
Translates to: SSESIRVDLSPVRACERSLVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...GCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCTGATAGATTCAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTCTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 5 (lower is better)
Translates to: AGGIHELWDWKNFTLRPILVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GATCTTTTCCTTCATGCCCCACACTTTGGCCTGCTCACTAGCAGTGATAATGCTCTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 5 (lower is better)
Translates to: DLFLHAPHFGLLTSSDNALVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...AGCATTATCACTGCTAGTGAGCAGGCCAAAGTGTGGGGCATGAAGGAAAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTATGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 5 (lower is better)
Translates to: TSYWATEENGVVVSILLLWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp TTTAAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTCTGAATCTATCAGAGTaGACCTCAGCCCAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: FKSHLNYHWSFPSLLSLSLNLSE*TSAQSV
Trigger: CACGGACTGGGCTGAGGTCAACTCTGATAGATTCAG...AGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCGCTGAGGTGGGAGGATaGCTTAAACCTGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: NISLRCTLLLEDISESQIAEVGG*LKPGAV
Trigger: AACTGCCCCAGGTTTAAGCAATCCTCCCACCTCAGC...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CGGGTTCAACTTAGATACACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTACAGCACATTCCTGCTTaGAAAAGTAACTTTCCTAGT +
Preference number: 5 (lower is better)
Translates to: RVQLRYTSYWATEENGVVQHIPA*KSNFPS
Trigger: ACTAGGAAAGTTACTTTTCAAAGCAGGAATGTGCTG...TACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGTGTATCTAAGTTGAACCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp GTGGTAGTAAGCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGCAGCACATTCCTGCTTaGAAAAGTAACTTTCCTAGT +
Preference number: 5 (lower is better)
Translates to: VVVSILLLPQAGGIHELWQHIPA*KSNFPS
Trigger: ACTAGGAAAGTTACTTTTCAAAGCAGGAATGTGCTG...CCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGCTTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp GCATCTTGCTACTACCGCAAGCTGGTGGCATCCATGAGCTATGGGACTGGAAAACAGCACATTCCTGCTTaGAAAAGTAACTTTCCTAGT +
Preference number: 5 (lower is better)
Translates to: ASCYYRKLVASMSYGTGKQHIPA*KSNFPS
Trigger: ACTAGGAAAGTTACTTTTCAAAGCAGGAATGTGCTG...TTTTCCAGTCCCATAGCTCATGGATGCCACCAGCTTGCGGTAGTAGCAAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp GCACAGGGGAGAAATCCAGTTGGCTTTGGAGTGTCTTGTTGGAAAACTAGGAGATTTCCAGAGTTTGGATaGTGTTCGATGGCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: AQGRNPVGFGVSCWKTRRFPEFG*CSMAVH
Trigger: GTGAACTGCCATCGAACACAATCCAAACTCTGGAAA...TCTCCTAGTTTTCCAACAAGACACTCCAAAGCCAACTGGATTTCTCCCCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS GCA 90 bp TTGGAAAACTCATTCAGGGCCAACAAAGACAGCCTCCATGAGATATaGGCATGTTCTCTACAAGTCTGGGTTAGAAACAAGACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LENSFRANKDSLHEI*ACSLQVWVRNKTFQ
Trigger: CTGGAAGGTCTTGTTTCTAACCCAGACTTGTAGAGAACATGCGCATATCTCATGGAGGCTGTCTTTGTTGGCCCTGAATGAGTTTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS-3UTR CAA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCACCGCAGAGTTCTCCTaGTTCTCAGATGGGATGGCA +
Preference number: 5 (lower is better)
Translates to: NISLRCTLLLEDISESQITAEFS*FSDGMA
Trigger: TGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGT...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGGCCCTCCTGATGCCATaGACATTGCTGAACATGGGA +
Preference number: 5 (lower is better)
Translates to: ISDRYHSASLKATQAASEALLMP*TLLNMG
Trigger: TCCCATGTTCAGCAATGTCAATGGCATCAGGAGGGC...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp ACACAGCCTTTTCCCTCAGATTTATGTGAGGAGGACTCACAGATTCTGAGATGGCTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 5 (lower is better)
Translates to: TQPFPSDLCEEDSQILRWLVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...CCATCTCAGAATCTGTGAGTCCTCCTCACATAAATCTGAGGGAAAAGGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTGTGTCCAGAAACATGTaGCATGACTTTTTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIVSRNM*HDFLRA
Trigger: GGCTCTTAAAAAGTCATGCAACATGTTTCTGGACAC...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GCTGGTGGCATCCATGAGCTATGGGACTGGAAAAATTTCACACTGAGGCCAATTAGATGCACTCTCCTTTaGGAGGATATTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: AGGIHELWDWKNFTLRPIRCTLL*EDISES
Trigger: TGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCT...AATTGGCCTCAGTGTGAAATTTTTCCAGTCCCATAGCTCATGGATGCCACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCAGATTGAGCCAAGCTaGGCCTTTAGTGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFQIEPS*AFSELC
Trigger: ACACAATTCACTAAAGGCCAAGCTTGGCTCAATCTG...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGTCAGGGCCAACTGGATaGAGCAATCACATTCATGGC +
Preference number: 5 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQSGPTG*SNHIHG
Trigger: GCCATGAATGTGATTGCTCAATCCAGTTGGCCCTGA...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp ACGAGCTATTGGGCCACCGAGGAAAACGGTGTGGTAGTAAGCATCTTGCTACTACAGCACATTCCTGCTTaGAAAAGTAACTTTCCTAGT +
Preference number: 5 (lower is better)
Translates to: TSYWATEENGVVVSILLLQHIPA*KSNFPS
Trigger: ACTAGGAAAGTTACTTTTCAAAGCAGGAATGTGCTG...TAGTAGCAAGATGCTTACTACCACACCGTTTTCCTCGGTGGCCCAATAGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp AGAGTTGACCTCAGCCCAGTCCGTGCTTGTGAAAGAAGCATTGCCATAGACAAGGGATGGAGACCGAGTTaGATATATAAATCAGACTTG +
Preference number: 5 (lower is better)
Translates to: RVDLSPVRACERSIAIDKGWRPS*IYKSDL
Trigger: CAAGTCTGATTTATATATCAAACTCGGTCTCCATCC...CTTGTCTATGGCAATGCTTCTTTCACAAGCACGGACTGGGCTGAGGTCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp CATTCCATAAAGCATCTTTCCCCTCTCTTGTCCCTGGGTGCTGAAGGATGTCACGGATGGAGACCGAGTTaGATATATAAATCAGACTTG +
Preference number: 5 (lower is better)
Translates to: HSIKHLSPLLSLGAEGCHGWRPS*IYKSDL
Trigger: CAAGTCTGATTTATATATCAAACTCGGTCTCCATCC...GTGACATCCTTCAGCACCCAGGGACAAGAGAGGGGAAAGATGCTTTATGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS GCA 90 bp GAATGCCGTACAGCTCAAACATCTCACCGCCTTGCTACCACCTCGTaGATTATTTATGATTTGTTTGGCTTAAAGCATGCTCTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: ECRTAQTSHRLATTS*IIYDLFGLKHALSF
Trigger: GAAAGAGAGAGCATGCTTTAAGCCAAACAAATCATAAATAATGCACGAGGTGGTAGCAAGGCGGTGAGATGTTTGAGCTGTACGGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS-3UTR CAA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp GGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTCTGTCATGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 5 (lower is better)
Translates to: GVLSSREHVSPCFRIFLSWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...TGACAGAAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGAGATGCACTCTCCTTTaGGAGGATATTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLERCTLL*EDISES
Trigger: TGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCT...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GTTATTGAGGATCAGACATGGGAAATATCCAGCACCAAGACAACAGATGGGGTTGAACATTTCCAGAGTTaGGATTGTGTTCGATGGCAG +
Preference number: 5 (lower is better)
Translates to: VIEDQTWEISSTKTTDGVEHFQS*DCVRWQ
Trigger: CTGCCATCGAACACAATCCAAACTCTGGAAATGTTC...AACCCCATCTGTTGTCTTGGTGCTGGATATTTCCCATGTCTGATCCTCAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTCAGCCCAAAAATTCTTaGACCAAAGAAGGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSQPKNS*TKEGSW
Trigger: CCAACTCCCTTCTTTGGTCAAAGAATTTTTGGGCTG...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CAA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTCCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AAGAGCCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTAGATGCACTCTCCTTTaGGAGGATATTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: KSHLNYHWSFPSLLSLSSRCTLL*EDISES
Trigger: TGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCT...AGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGGCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp GGCCTGGGATGGAGACCGAGTTTGATATATAAATCAGACTTGCTTGGAAGTGCTCAGCACATTCCTGCTTaGAAAAGTAACTTTCCTAGT +
Preference number: 5 (lower is better)
Translates to: GLGWRPSLIYKSDLLGSAQHIPA*KSNFPS
Trigger: ACTAGGAAAGTTACTTTTCAAAGCAGGAATGTGCTG...AGCACTTCCAAGCAAGTCTGATTTATATATCAAACTCGGTCTCCATCCCAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp TTGTCCCTGGGTGCTGAAGGATGTCACACTTGGACCTGTCACTTAATTAAAATGATAAATCAGACTTGCTaGGAAGTGCTTATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LSLGAEGCHTWTCHLIKMINQTC*EVLISC
Trigger: GCAGGAGATAAGCACTTCCAAGCAAGTCTGATTTAT...CATTTTAATTAAGTGACAGGTCCAAGTGTGACATCCTTCAGCACCCAGGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp AGCTCTGGAGTACTAAGCTCCAGAGAGCATGTTAGTCCATGCTTCAGGATCTTTGGATGGAGACCGAGTTaGATATATAAATCAGACTTG +
Preference number: 5 (lower is better)
Translates to: SSGVLSSREHVSPCFRIFGWRPS*IYKSDL
Trigger: CAAGTCTGATTTATATATCAAACTCGGTCTCCATCC...AAAGATCCTGAAGCATGGACTAACATGCTCTCTGGAGCTTAGTACTCCAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGAACATTTCCAGAGTTaGGATTGTGTTCGATGGCAG +
Preference number: 5 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQEHFQS*DCVRWQ
Trigger: CTGCCATCGAACACAATCCAAACTCTGGAAATGTTC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp CCACTTAAATTACCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTTGGAGTTAAAGTCACTTCAGTaGTGGGCAACAAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: PLKLPLVLPKSPVLVFLELKSLQ*WATKSL
Trigger: AAGTGACTTTGTTGCCCACAACTGAAGTGACTTTAA...CTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530277.5
CDS-3UTR CAA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGGAAATCCAGTTGGCTTaGGAGTGTCTTGTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQEIQLA*ECLVGK
Trigger: TTTTCCAACAAGACACTCCAAAGCCAACTGGATTTC...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAACTTGTACAAAGTCATTaGGAGCACAGGGGAGAAATC +
Preference number: 5 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKLVQSH*EHRGEI
Trigger: GATTTCTCCCCTGTGCTCCAAATGACTTTGTACAAG...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp AATATCAGTCTCAGATGCACTCTCCTTTTGGAGGATATTTCAGAGTCACAGATCCCACTTAAATTACCATaGGTCCTTCCCAAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: NISLRCTLLLEDISESQIPLKLP*VLPKSP
Trigger: AGGAGACTTGGGAAGGACCAATGGTAATTTAAGTGG...GATCTGTGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCTGAGACTGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp AGCTACTTAACCTCAGAGACCCTCAGTTTCTTCTTTTGTAATGTGACCTCACAGAGATGCACTCTCCTTTaGGAGGATATTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SYLTSETLSFFFCNVTSQRCTLL*EDISES
Trigger: TGACTCTGAAATATCCTCCAAAAGGAGAGTGCATCT...CTGTGAGGTCACATTACAAAAGAAGAAACTGAGGGTCTCTGAGGTTAAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS-3UTR CAA 90 bp CCAACTGGATTGAGCAATCACATTCATGGCTGTGAAGTAGTAAGAATGGGAAAATGGTGCACAGAAATTTaGAGAGGAAGAACTCAGGAA +
Preference number: 5 (lower is better)
Translates to: PTGLSNHIHGCEVVRMGKWCTEI*RGRTQE
Trigger: TTCCTGAGTTCTTCCTCTCAAAATTTCTGTGCACCA...TTTTCCCATTCTTACTACTTCACAGCCATGAATGTGATTGCTCAATCCAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
CDS-3UTR CAA 90 bp ATAAGTGATAGATACCATTCAGCTTCATTAAAAGCCACGCAAGCAGCATCTGAGATAAATCAGACTTGCTaGGAAGTGCTTATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ISDRYHSASLKATQAASEINQTC*EVLISC
Trigger: GCAGGAGATAAGCACTTCCAAGCAAGTCTGATTTAT...CTCAGATGCTGCTTGCGTGGCTTTTAATGAAGCTGAATGGTATCTATCACTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS-3UTR CAA 90 bp TCCCTCCCCTCTCACACTGCTCATTTACTTATGATCCATCTCAGACTAAACATTGGATGGAGACCGAGTTaGATATATAAATCAGACTTG +
Preference number: 5 (lower is better)
Translates to: SLPSHTAHLLMIHLRLNIGWRPS*IYKSDL
Trigger: CAAGTCTGATTTATATATCAAACTCGGTCTCCATCC...AATGTTTAGTCTGAGATGGATCATAAGTAAATGAGCAGTGTGAGAGGGGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000657123.1
ENST00000657191.1
CDS TCA 90 bp AGCCGTCATTGGAGCCATATTTTTAAGTACAGCTTAAATAAAGACTaGGTAAAGAAACTCAAGAAGATGTCAAAGGTATTCCAAATCCTG +
Preference number: 5 (lower is better)
Translates to: SRHWSHIFKYSLNKD*VKKLKKMSKVFQIL
Trigger: CAGGATTTGGAATACCTTTGACATCTTCTTGAGTTTCTTTACTCAGTCTTTATTTAAGCTGTACTTAAAAATATGGCTCCAATGACGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS GCA 72 bp GGCGGCTTCCAAGGCTCTCGCCTCCCCAGGATCGGTTaGGTTCCGACTGGAATCCTCCCAGCCCCGCGGCTC +
Preference number: 6 (lower is better)
Translates to: GGFQGSRLPRIG*VPTGILPAPRL
Trigger: GAGCCGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGGCGAGAGCCTTGGAAGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000530277.5
ENST00000667790.1
CDS CAA 72 bp TGGCGGCTTCCAAGGCTCTCGCCTCCCCAGGATCGGTaGCGTTCCGACTGGAATCCTCCCAGCCCCGCGGCT +
Preference number: 6 (lower is better)
Translates to: WRLPRLSPPQDR*RSDWNPPSPAA
Trigger: AGCCGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGGCGAGAGCCTTGGAAGCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000530277.5
ENST00000667790.1
CDS GCA 72 bp ACTCCAGCTTCCACTCGCGCCCCTGCCTCGCTCGTTTaGGCCCAGGGTAAGCTCAGCTCGGAAGGGAGTCGC +
Preference number: 6 (lower is better)
Translates to: TPASTRAPASLV*AQGKLSSEGSR
Trigger: GCGACTCCCTTCCGAGCTGAGCTTACCCTGGGCGCAAACGAGCGAGGCAGGGGCGCGAGTGGAAGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CAA 90 bp GTGGAAGGGTCCAGGTTGATTCACCTCTCGCCTCCCCAGGATCGGTaGCGTTCCGACTGGAATCCTCCCAGCCCCGCGGCTCCTGCTTCG +
Preference number: 6 (lower is better)
Translates to: VEGSRLIHLSPPQDR*RSDWNPPSPAAPAS
Trigger: CGAAGCAGGAGCCGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGGCGAGAGGTGAATCAACCTGGACCCTTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CCA 72 bp CCTCTCTCTTCATGCAGGAGATGCAGCGCAGCTTCATaGGGTTGCCCTGCACGGCCTCCGTCTCCGAGGGCA +
Preference number: 6 (lower is better)
Translates to: PLSSCRRCSAAS*GCPARPPSPRA
Trigger: TGCCCTCGGAGACGGAGGCCGTGCAGGGCAACCCCATGAAGCTGCGCTGCATCTCCTGCATGAAGAGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS CAA 72 bp TCCAGGTTGATTCACCTCTCGCCTCCCCAGGATCGGTaGCGTTCCGACTGGAATCCTCCCAGCCCCGCGGCT +
Preference number: 6 (lower is better)
Translates to: SRLIHLSPPQDR*RSDWNPPSPAA
Trigger: AGCCGCGGGGCTGGGAGGATTCCAGTCGGAACGCAACCGATCCTGGGGAGGCGAGAGGTGAATCAACCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CAA 90 bp GAGTCGCACTGCTGGCCTAGCAGCCAGGCTGTGGAAGGGTCCAGGTaGATTCACCTCTCGCCTCCCCAGGATCGGTTGCGTTCCGACTGG +
Preference number: 6 (lower is better)
Translates to: ESHCWPSSQAVEGSR*IHLSPPQDRLRSDW
Trigger: CCAGTCGGAACGCAACCGATCCTGGGGAGGCGAGAGGTGAATCAACCTGGACCCTTCCACAGCCTGGCTGCTAGGCCAGCAGTGCGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS GCA 72 bp TGGTGGCCTCCACCTCCTCTCTCTTCATGCAGGAGATaGAGCGCAGCTTCATGGGGTTGCCCTGCACGGCCT +
Preference number: 6 (lower is better)
Translates to: WWPPPPLSSCRR*SAASWGCPARP
Trigger: AGGCCGTGCAGGGCAACCCCATGAAGCTGCGCTGCATCTCCTGCATGAAGAGAGAGGAGGTGGAGGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS CCA 72 bp CGCCCTCGGGCCTGTAGAACCATTCCACCACCGTGGTaGCCTCCACCTCCTCTCTCTTCATGCAGGAGATGC +
Preference number: 6 (lower is better)
Translates to: RPRACRTIPPPW*PPPPLSSCRRC
Trigger: GCATCTCCTGCATGAAGAGAGAGGAGGTGGAGGCCACCACGGTGGTGGAATGGTTCTACAGGCCCGAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS CAA 72 bp TGCTGGCCTAGCAGCCAGGCTGTGGAAGGGTCCAGGTaGATTCACCTCTCGCCTCCCCAGGATCGGTTGCGT +
Preference number: 6 (lower is better)
Translates to: CWPSSQAVEGSR*IHLSPPQDRLR
Trigger: ACGCAACCGATCCTGGGGAGGCGAGAGGTGAATCAACCTGGACCCTTCCACAGCCTGGCTGCTAGGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CAA 90 bp AGGCAGCTCTTGCCAAGCCGTGACGCAGGGAGGAAGCACAGAGCATaGCTGGCTCTGAGGGTCAGCTGGCCTCATGTCACACTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: RQLLPSRDAGRKHRA*LALRVSWPHVTLLL
Trigger: CAGGAGCAGTGTGACATGAGGCCAGCTGACCCTCAGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp GCCAGGGGAAACAATCTATTGAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGGCTCTCGCCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: ARGNNLLKAGIF*GWRLPRLSPPQ
Trigger: CTGGGGAGGCGAGAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000530277.5
ENST00000667790.1
CDS CCA 72 bp ATGATGTCATCTGCAAGGCGCGCCGTACGCGGTTCCTaGCTTCGCCTCCCAGACCCCATGCCTTCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: MMSSARRAVRGS*LRLPDPMPSSS
Trigger: AGAACTGGAAGGCATGGGGTCTGGGAGGCGAAGCCAGGAACCGCGTACGGCGCGCCTTGCAGATGACATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657191.1
CDS CAA 90 bp AGGCAGCTCTTGCCAAGCCGTGACGCAGGGAGGAAGCACAGAGCATaGCTGGCTCTGAGGGTCAGCTGGCCATTGGTCCTTCCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: RQLLPSRDAGRKHRA*LALRVSWPLVLPKS
Trigger: AGACTTGGGAAGGACCAATGGCCAGCTGACCCTCAGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCACGGCTTGGCAAGAGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS TCA 72 bp GTGACGCAGGGAGGAAGCACAGAGCATTGCTGGCTCTaGGGGTCAGCTGGCCTCATGTCACACTGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: VTQGGSTEHCWL*GSAGLMSHCSC
Trigger: ACAGGAGCAGTGTGACATGAGGCCAGCTGACCCTCAGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS GCA 72 bp TTCAGAGTGACGTTGAGCACAGTGATGGACACGTCCTaGAGGTCCTTGCTGCCATTCCACTGCAGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: FRVTLSTVMDTS*RSLLPFHCRRP
Trigger: GGGGCGCCTGCAGTGGAATGGCAGCAAGGACCTGCAGGACGTGTCCATCACTGTGCTCAACGTCACTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000667790.1
CDS GCA 72 bp AGGGGGATCAGCCGCGTCGTCTTCACAAAGGGCCGATaGGCCTCAAACTCAAACTCCCGGGACACATTGCAG +
Preference number: 6 (lower is better)
Translates to: RGISRVVFTKGR*ASNSNSRDTLQ
Trigger: CTGCAATGTGTCCCGGGAGTTTGAGTTTGAGGCGCATCGGCCCTTTGTGAAGACGACGCGGCTGATCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
ENST00000659826.1
ENST00000667790.1
CDS GCA 72 bp CACTCACCCCTGCCGATCTCACACCTGCAAGGGTGCTaGAGAGGTGTCTACATCTGGAGGACGCCAATGTGG +
Preference number: 6 (lower is better)
Translates to: HSPLPISHLQGC*RGVYIWRTPMW
Trigger: CCACATTGGCGTCCTCCAGATGTAGACACCTCTGCAGCACCCTTGCAGGTGTGAGATCGGCAGGGGTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp GGAAACAATCTATTGAAGGCAGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCTCTCGCCTCCCCAGGATCGG +
Preference number: 6 (lower is better)
Translates to: GNNLLKAGIFWG*RLPRLSPPQDR
Trigger: CCGATCCTGGGGAGGCGAGAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299333.8
ENST00000530277.5
ENST00000667790.1
CDS CCA 72 bp GACTGCGCCCTCTCAGATTCTTTCGAGGAAACCCTTTaGGACGAACTGCCCCCAGGGGGCGACTTTCTGACC +
Preference number: 6 (lower is better)
Translates to: DCALSDSFEETL*DELPPGGDFLT
Trigger: GGTCAGAAAGTCGCCCCCTGGGGGCAGTTCGTCCCAAAGGGTTTCCTCGAAAGAATCTGAGAGGGCGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CAA 72 bp GGACTGCGCCCTCTCAGATTCTTTCGAGGAAACCCTTaGGGACGAACTGCCCCCAGGGGGCGACTTTCTGAC +
Preference number: 6 (lower is better)
Translates to: GLRPLRFFRGNP*GRTAPRGRLSD
Trigger: GTCAGAAAGTCGCCCCCTGGGGGCAGTTCGTCCCAAAGGGTTTCCTCGAAAGAATCTGAGAGGGCGCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CAA 72 bp TTGCCAAGCCGTGACGCAGGGAGGAAGCACAGAGCATaGCTGGCTCTGAGGGTCAGCTGGCCTCATGTCACA +
Preference number: 6 (lower is better)
Translates to: LPSRDAGRKHRA*LALRVSWPHVT
Trigger: TGTGACATGAGGCCAGCTGACCCTCAGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCACGGCTTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CAA 72 bp TTGCCAAGCCGTGACGCAGGGAGGAAGCACAGAGCATaGCTGGCTCTGAGGGTCAGCTGGCCATTGGTCCTT +
Preference number: 6 (lower is better)
Translates to: LPSRDAGRKHRA*LALRVSWPLVL
Trigger: AAGGACCAATGGCCAGCTGACCCTCAGAGCCAGCAATGCTCTGTGCTTCCTCCCTGCGTCACGGCTTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS CAA 90 bp CTCGGTCAAGGACTGCGCCCTCTCAGATTCTTTCGAGGAAACCCTTaGGGACGAACTGCCCCCAGGGGGCGACTTTCTGACCGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: LGQGLRPLRFFRGNP*GRTAPRGRLSDRRK
Trigger: CTTCCTTCGGTCAGAAAGTCGCCCCCTGGGGGCAGTTCGTCCCAAAGGGTTTCCTCGAAAGAATCTGAGAGGGCGCAGTCCTTGACCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS GCA 72 bp GAACTAGCTCAGCCTTGCCACACTTCCCACCAGCTATaGACGAGGGTGTCTGGAGGCAAAAGCCCGAGAGAG +
Preference number: 6 (lower is better)
Translates to: ELAQPCHTSHQL*TRVSGGKSPRE
Trigger: CTCTCTCGGGCTTTTGCCTCCAGACACCCTCGTGCATAGCTGGTGGGAAGTGTGGCAAGGCTGAGCTAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CAA 72 bp CTTGCTCTGGTACCTGGCAGACGAACTAGCTCAGCCTaGCCACACTTCCCACCAGCTATGCACGAGGGTGTC +
Preference number: 6 (lower is better)
Translates to: LALVPGRRTSSA*PHFPPAMHEGV
Trigger: GACACCCTCGTGCATAGCTGGTGGGAAGTGTGGCAAGGCTGAGCTAGTTCGTCTGCCAGGTACCAGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS TCA 72 bp TCACCCTGCTTCCAGCGCGAATTTGCTGCACGTCCCTaGGCAAGCCCCTTGCTCTTGCAGAGAACTCTGTTC +
Preference number: 6 (lower is better)
Translates to: SPCFQREFAARP*ASPLLLQRTLF
Trigger: GAACAGAGTTCTCTGCAAGAGCAAGGGGCTTGCTCAGGGACGTGCAGCAAATTCGCGCTGGAAGCAGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS TCA 72 bp CCAAATCCTGACTCTCCCGCCCATTGGCTTTCTCACTaGCTGTCATCAGCTGCTCAGGAGCCAGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: PNPDSPAHWLSH*LSSAAQEPGKR
Trigger: CCTCTTCCCTGGCTCCTGAGCAGCTGATGACAGTCAGTGAGAAAGCCAATGGGCGGGAGAGTCAGGATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS GCA 72 bp TTGCTCTGGTACCTGGCAGACGAACTAGCTCAGCCTTaGCACACTTCCCACCAGCTATGCACGAGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: LLWYLADELAQP*HTSHQLCTRVS
Trigger: AGACACCCTCGTGCATAGCTGGTGGGAAGTGTGGCAAGGCTGAGCTAGTTCGTCTGCCAGGTACCAGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS GCA 72 bp GGGAGTCATCAACTTGCATATGACCTCACTCACCCCTaGCGATCTCACACCTGCAAGGGTGCTGCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: GSHQLAYDLTHP*RSHTCKGAAEV
Trigger: CACCTCTGCAGCACCCTTGCAGGTGTGAGATCGGCAGGGGTGAGTGAGGTCATATGCAAGTTGATGACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp TCACACCTGCAAGGGTGCTGCAGAGGTGTCTACATCTaGAGGACGCCAATGTGGGCGATTCTGATGTCTGCC +
Preference number: 6 (lower is better)
Translates to: SHLQGCCRGVYI*RTPMWAILMSA
Trigger: GGCAGACATCAGAATCGCCCACATTGGCGTCCTCCAGATGTAGACACCTCTGCAGCACCCTTGCAGGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS CAA 72 bp CCGGTGGTGGAGGGTGGTATTCCTGGGGAGAGAGCGTaGGAAAACTCATTCAGGGCCAACAAAGACAGCCTC +
Preference number: 6 (lower is better)
Translates to: PVVEGGIPGERA*ENSFRANKDSL
Trigger: GAGGCTGTCTTTGTTGGCCCTGAATGAGTTTTCCAACGCTCTCTCCCCAGGAATACCACCCTCCACCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS GCA 72 bp AGCGCGAATTTGCTGCACGTCCCTGAGCAAGCCCCTTaGTCTTGCAGAGAACTCTGTTCTCCCAGCCACAAA +
Preference number: 6 (lower is better)
Translates to: SANLLHVPEQAP*SCRELCSPSHK
Trigger: TTTGTGGCTGGGAGAACAGAGTTCTCTGCAAGAGCAAGGGGCTTGCTCAGGGACGTGCAGCAAATTCGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp TGCTGCAGAGGTGTCTACATCTGGAGGACGCCAATGTaGGCGATTCTGATGTCTGCCCTTTATCCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: CCRGVYIWRTPM*AILMSALYPEA
Trigger: GGCCTCTGGATAAAGGGCAGACATCAGAATCGCCCACATTGGCGTCCTCCAGATGTAGACACCTCTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS CCA 72 bp GCCAGGGGAAACAATCTATTGAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGGCTGTTCCTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: ARGNNLLKAGIF*GWRLPRLFLSS
Trigger: TGAAGACAGGAACAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657123.1
CDS GCA 72 bp CCAAGGCTACACAGAGAGATTCCCTCGGTCAAGGACTaGGCCCTCTCAGATTCTTTCGAGGAAACCCTTTGG +
Preference number: 6 (lower is better)
Translates to: PRLHREIPSVKD*ALSDSFEETLW
Trigger: CCAAAGGGTTTCCTCGAAAGAATCTGAGAGGGCGCAGTCCTTGACCGAGGGAATCTCTCTGTGTAGCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CCA 72 bp GGAAACAATCTATTGAAGGCAGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCTACACAGAGAGATTCCCTCG +
Preference number: 6 (lower is better)
Translates to: GNNLLKAGIFWG*RLPRLHREIPS
Trigger: CGAGGGAATCTCTCTGTGTAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CCA 72 bp GCCAGGGGAAACAATCTATTGAAGGCAGGCATCTTCTaGGGCTGGCGGCTTCCAAGGCTACACAGAGAGATT +
Preference number: 6 (lower is better)
Translates to: ARGNNLLKAGIF*GWRLPRLHREI
Trigger: AATCTCTCTGTGTAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392770.6
CDS CCA 72 bp CAGTGGAAAGCAAGCCCTCCAGACAGGCGAACAATCTaGATTTTCACCCTGCTTCCAGCGCGAATTTGCTGC +
Preference number: 6 (lower is better)
Translates to: QWKASPPDRRTI*IFTLLPARICC
Trigger: GCAGCAAATTCGCGCTGGAAGCAGGGTGAAAATCCAGATTGTTCGCCTGTCTGGAGGGCTTGCTTTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp CTCCACTGGTACCGCAGAGTTCTCCTTGTTCTCAGATaGGATGGCAAGGTAGTCAGACCTGTGAGAGCAAGC +
Preference number: 6 (lower is better)
Translates to: LHWYRRVLLVLR*DGKVVRPVRAS
Trigger: GCTTGCTCTCACAGGTCTGACTACCTTGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS CAA 72 bp GAGCTACACCCTCCAATCACCTGGGGAGTCATCAACTaGCATATGACCTCACTCACCCCTGCCGATCTCACA +
Preference number: 6 (lower is better)
Translates to: ELHPPITWGVIN*HMTSLTPADLT
Trigger: TGTGAGATCGGCAGGGGTGAGTGAGGTCATATGCAAGTTGATGACTCCCCAGGTGATTGGAGGGTGTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CAA 90 bp TTTGAGCTGCCGGTGGTGGAGGGTGGTATTCCTGGGGAGAGAGCGTaGGAAAACTCATTCAGGGCCAACAAAGACAGCCTCCATGAGATA +
Preference number: 6 (lower is better)
Translates to: FELPVVEGGIPGERA*ENSFRANKDSLHEI
Trigger: TATCTCATGGAGGCTGTCTTTGTTGGCCCTGAATGAGTTTTCCAACGCTCTCTCCCCAGGAATACCACCCTCCACCACCGGCAGCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CAA 90 bp GTCAGCTGGCCATTGGTCCTTCCCAAGTCTCCTGTCCTTGTCTTCTaGGAGGGAACCTTAGAGACCCATCAGGATCTAGCTCTGGAGTAC +
Preference number: 6 (lower is better)
Translates to: VSWPLVLPKSPVLVF*EGTLETHQDLALEY
Trigger: GTACTCCAGAGCTAGATCCTGATGGGTCTCTAAGGTTCCCTCCAAGAAGACAAGGACAGGAGACTTGGGAAGGACCAATGGCCAGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS TCA 72 bp GGTGAGGAAGACCAGAAGGATGTACATCATGATTTCTaGGACCACAGAGGTGAAGTCCTCTCCAGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: GEEDQKDVHHDF*DHRGEVLSSPA
Trigger: GGCAGGGCTGGAGAGGACTTCACCTCTGTGGTCTCAGAAATCATGATGTACATCCTTCTGGTCTTCCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS GCA 72 bp TCACCCAGGTTTCCAACTGGAGCTAGAGGTCATAGATaGAGCGTGAGGCACATGAGAATGCCGTACAGCTCA +
Preference number: 6 (lower is better)
Translates to: SPRFPTGARGHR*SVRHMRMPYSS
Trigger: TGAGCTGTACGGCATTCTCATGTGCCTCACGCTGCATCTATGACCTCTAGCTCCAGTTGGAAACCTGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp AAAAGAGGGGCACCAGAGCTACACCCTCCAATCACCTaGGGAGTCATCAACTTGCATATGACCTCACTCACC +
Preference number: 6 (lower is better)
Translates to: KRGAPELHPPIT*GVINLHMTSLT
Trigger: GGTGAGTGAGGTCATATGCAAGTTGATGACTCCCCAGGTGATTGGAGGGTGTAGCTCTGGTGCCCCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp GAGGGAGTGGGATGCCTGGAAGAAGTAGCCGAGCAGTaGAAGGAATCCTGGCCTCAAAGTGAGATATCTAGA +
Preference number: 6 (lower is better)
Translates to: EGVGCLEEVAEQ*KESWPQSEISR
Trigger: TCTAGATATCTCACTTTGAGGCCAGGATTCCTTCCACTGCTCGGCTACTTCTTCCAGGCATCCCACTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp GGAAACAATCTATTGAAGGCAGGCATCTTCTGGGGCTaGCGGCTTCCAAGGCTGTTCCTGTCTTCACCTCAT +
Preference number: 6 (lower is better)
Translates to: GNNLLKAGIFWG*RLPRLFLSSPH
Trigger: ATGAGGTGAAGACAGGAACAGCCTTGGAAGCCGCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657123.1
CDS CAA 72 bp GTAAGGAACATGCCTTATTTCAACTGCCTCTGTCTTTaGAGCTGCCGGTGGTGGAGGGTGGTATTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: VRNMPYFNCLCL*SCRWWRVVFLG
Trigger: CCCCAGGAATACCACCCTCCACCACCGGCAGCTCAAAAGACAGAGGCAGTTGAAATAAGGCATGTTCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CAA 72 bp AAGTCCTCTCCAGCTTATTTCAACTGCCTCTGTCTTTaGAGCTGCCGGTGGTGGAGGGTGGTATTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: KSSPAYFNCLCL*SCRWWRVVFPP
Trigger: AGGAGGGAATACCACCCTCCACCACCGGCAGCTCAAAAGACAGAGGCAGTTGAAATAAGCTGGAGAGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659826.1
CDS TCA 72 bp GGTGAGGAAGACCAGAAGGATGTACATCATGATTTCTaGGACCACAGAGGTGAAGTCCTCTCCAGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GEEDQKDVHHDF*DHRGEVLSSLL
Trigger: GAGGAGGCTGGAGAGGACTTCACCTCTGTGGTCTCAGAAATCATGATGTACATCCTTCTGGTCTTCCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299333.8
ENST00000392770.6
ENST00000530277.5
ENST00000657123.1
ENST00000657191.1
CDS TCA 72 bp GTGTCTACATCTGGAGGACGCCAATGTGGGCGATTCTaGTGTCTGCCCTTTATCCAGAGGCCCTGGATTAAA +
Preference number: 6 (lower is better)
Translates to: VSTSGGRQCGRF*CLPFIQRPWIK
Trigger: TTTAATCCAGGGCCTCTGGATAAAGGGCAGACATCAGAATCGCCCACATTGGCGTCCTCCAGATGTAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS TCA 72 bp CAGGAGGTGACAGCCAAAGCCAGAATAAACCCAACTTaGACAAAGAGAACCAGGGAGACCTTGTGGGACCAC +
Preference number: 6 (lower is better)
Translates to: QEVTAKARINPT*TKRTRETLWDH
Trigger: GTGGTCCCACAAGGTCTCCCTGGTTCTCTTTGTTCAAGTTGGGTTTATTCTGGCTTTGGCTGTCACCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS TCA 72 bp CCTGCTTTGCAGTCTCGCAGTAGTTCTAGATTCCTGTaGGGTCCCCTCCTTTGTGAAACCATCCCCAACTTC +
Preference number: 6 (lower is better)
Translates to: PALQSRSSSRFL*GPLLCETIPNF
Trigger: GAAGTTGGGGATGGTTTCACAAAGGAGGGGACCTCACAGGAATCTAGAACTACTGCGAGACTGCAAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp CTTGTTTTTCCTTCTGTTTTTACCCGAGGCTTGCTCTaGTACCTGGCAGACGAACTAGCTCAGCCTTGCCAC +
Preference number: 6 (lower is better)
Translates to: LVFPSVFTRGLL*YLADELAQPCH
Trigger: GTGGCAAGGCTGAGCTAGTTCGTCTGCCAGGTACCAGAGCAAGCCTCGGGTAAAAACAGAAGGAAAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS CCA 72 bp GCCTCATGTCACACTGCTCCTGTTCTATTCCTCCACTaGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGAT +
Preference number: 6 (lower is better)
Translates to: ASCHTAPVLFLH*YRRVLLVLRWD
Trigger: ATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAGTGGAGGAATAGAACAGGAGCAGTGTGACATGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp CTGGTACCGCAGAGTTCTCCTTGTTCTCAGATGGGATaGCAAGGTAGTCAGACCTGTGAGAGCAAGCATTCT +
Preference number: 6 (lower is better)
Translates to: LVPQSSPCSQMG*QGSQTCESKHS
Trigger: AGAATGCTTGCTCTCACAGGTCTGACTACCTTGCCATCCCATCTGAGAACAAGGAGAACTCTGCGGTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS TCA 72 bp GTCTGCCCTTTATCCAGAGGCCCTGGATTAAATAAATaGTATCCACGCTTCCTTCACACCCGACCATCCACG +
Preference number: 6 (lower is better)
Translates to: VCPLSRGPGLNK*YPRFLHTRPST
Trigger: CGTGGATGGTCGGGTGTGAAGGAAGCGTGGATATCATTTATTTAATCCAGGGCCTCTGGATAAAGGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527125.1
ENST00000655686.1
CDS CAA 90 bp CCTGTGAGAGCAAGCATTCTGAAGGTGCTAGCTTTCATTATTACTTaGGCATCTCTGGACTTACGCGTTTTCTTGGGCTGCCTCTTCGGC +
Preference number: 6 (lower is better)
Translates to: PVRASILKVLAFIIT*ASLDLRVFLGCLFG
Trigger: GCCGAAGAGGCAGCCCAAGAAAACGCGTAAGTCCAGAGATGCCAAAGTAATAATGAAAGCTAGCACCTTCAGAATGCTTGCTCTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS CAA 90 bp CATGCAAGGGCCTTCACAATCCGGGCTTTCTCACCTCATTTCCATTaGGTTGGCCAGAAAAACTTCTGCTACACACTGTGGTATGTTAGA +
Preference number: 6 (lower is better)
Translates to: HARAFTIRAFSPHFH*VGQKNFCYTLWYVR
Trigger: TCTAACATACCACAGTGTGTAGCAGAAGTTTTTCTGGCCAACCAAATGGAAATGAGGTGAGAAAGCCCGGATTGTGAAGGCCCTTGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CAA 90 bp CAAGGGCCTTCACAATCCGGGCTTTCTCACCTCATTTCCATTTGGTaGGCCAGAAAAACTTCTGCTACACACTGTGGTATGTTAGAATCT +
Preference number: 6 (lower is better)
Translates to: QGPSQSGLSHLISIW*ARKTSATHCGMLES
Trigger: AGATTCTAACATACCACAGTGTGTAGCAGAAGTTTTTCTGGCCAACCAAATGGAAATGAGGTGAGAAAGCCCGGATTGTGAAGGCCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS TCA 72 bp GGTGAGGAAGACCAGAAGGATGTACATCATGATTTCTaGGACCACAGAGGTGAAGTCCTCTCCAGCTTATTT +
Preference number: 6 (lower is better)
Translates to: GEEDQKDVHHDF*DHRGEVLSSLF
Trigger: AAATAAGCTGGAGAGGACTTCACCTCTGTGGTCTCAGAAATCATGATGTACATCCTTCTGGTCTTCCTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659826.1
CDS TCA 72 bp GACTTACGCGTTTTCTTGGGCTGCCTCTTCGGCTTTTaGGACCTTTCTGTAGCAATATATCATCTCGATGAG +
Preference number: 6 (lower is better)
Translates to: DLRVFLGCLFGF*DLSVAIYHLDE
Trigger: CTCATCGAGATGATATATTGCTACAGAAAGGTCTCAAAAGCCGAAGAGGCAGCCCAAGAAAACGCGTAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS TCA 72 bp AGAGCTATCAACCTGTCCCCTTCTCCCAGCAGGGAATaGATTTATGTAATAAGAGATGCCACAGATGGGGAA +
Preference number: 6 (lower is better)
Translates to: RAINLSPSPSRE*IYVIRDATDGE
Trigger: TTCCCCATCTGTGGCATCTCTTATTACATAAATTCATTCCCTGCTGGGAGAAGGGGACAGGTTGATAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667790.1
CDS CAA 72 bp TCACAATCCGGGCTTTCTCACCTCATTTCCATTTGGTaGGCCAGAAAAACTTCTGCTACACACTGTGGTATG +
Preference number: 6 (lower is better)
Translates to: SQSGLSHLISIW*ARKTSATHCGM
Trigger: CATACCACAGTGTGTAGCAGAAGTTTTTCTGGCCAACCAAATGGAAATGAGGTGAGAAAGCCCGGATTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CAA 72 bp GCAAGCATTCTGAAGGTGCTAGCTTTCATTATTACTTaGGCATCTCTGGACTTACGCGTTTTCTTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: ASILKVLAFIIT*ASLDLRVFLGC
Trigger: GCAGCCCAAGAAAACGCGTAAGTCCAGAGATGCCAAAGTAATAATGAAAGCTAGCACCTTCAGAATGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655686.1
CDS CAA 72 bp CATGAGAATGCCGTACAGCTCAAACATCTCACCGCCTaGCTACCACCTCGTGCATTATTTATGATTTGTTTG +
Preference number: 6 (lower is better)
Translates to: HENAVQLKHLTA*LPPRALFMICL
Trigger: CAAACAAATCATAAATAATGCACGAGGTGGTAGCAAGGCGGTGAGATGTTTGAGCTGTACGGCATTCTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS GCA 72 bp ACAGCTCAAACATCTCACCGCCTTGCTACCACCTCGTaGATTATTTATGATTTGTTTGGCTTAAAGCATGCT +
Preference number: 6 (lower is better)
Translates to: TAQTSHRLATTS*IIYDLFGLKHA
Trigger: AGCATGCTTTAAGCCAAACAAATCATAAATAATGCACGAGGTGGTAGCAAGGCGGTGAGATGTTTGAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS TCA 72 bp ATCTCACCGCCTTGCTACCACCTCGTGCATTATTTATaGTTTGTTTGGCTTAAAGCATGCTCTCTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: ISPPCYHLVHYL*FVWLKACSLFQ
Trigger: TTGAAAGAGAGAGCATGCTTTAAGCCAAACAAATCATAAATAATGCACGAGGTGGTAGCAAGGCGGTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CCA 72 bp GCATGCTCTCTCTTTCAAAATGCAGTAGCCCACAAATaGCAATACAGGAAGCTGTCCTCAGTATTTTTAGTT +
Preference number: 6 (lower is better)
Translates to: ACSLFQNAVAHK*QYRKLSSVFLV
Trigger: AACTAAAAATACTGAGGACAGCTTCCTGTATTGCCATTTGTGGGCTACTGCATTTTGAAAGAGAGAGCATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS TCA 72 bp AAAGGACCATTAAAACATACTACATGGCAGATATCCTaGTATATCTACTCCTTGCTAGTGGGAGAAATGTTG +
Preference number: 6 (lower is better)
Translates to: KGPLKHTTWQIS*YIYSLLVGEML
Trigger: CAACATTTCTCCCACTAGCAAGGAGTAGATATATCAGGATATCTGCCATGTAGTATGTTTTAATGGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CAA 72 bp TGTGCTTATCTTTCTTTTCTGTGGACTGTGTGCTTATaGAGAACATATTTATTTCTGGATTATCTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: CAYLSFLWTVCL*RTYLFLDYLPA
Trigger: AGCAGGCAGATAATCCAGAAATAAATATGTTCTCAATAAGCACACAGTCCACAGAAAAGAAAGATAAGCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527125.1
CDS CAA 72 bp GCTATTTACAGGTGTGTAAACAACCATTTCCCTTACTaGAGACTCAGTTTCTTAATTTGTAGGTTGAGGATA +
Preference number: 6 (lower is better)
Translates to: AIYRCVNNHFPY*RLSFLICRLRI
Trigger: TATCCTCAACCTACAAATTAAGAAACTGAGTCTCAAGTAAGGGAAATGGTTGTTTACACACCTGTAAATAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527125.1