RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCN3A (Homo sapiens)

Ensembl gene IDs: ENSG00000153253

Ensembl transcript IDs: ENST00000283254.12, ENST00000409101.7, ENST00000440431.6, ENST00000453007.1, ENST00000465043.1, ENST00000638473.1, ENST00000639244.1, ENST00000640652.1, ENST00000658209.1, ENST00000668657.1

Found 694 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCATTAGCAGAATTAAATATGATGTTGGGATTGCCCATCTCGCCTaGCCATGCTGTGATGTGTCACACGATTCAGCAGAGAGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: LISRIKYDVGIAHLA*PCCDVSHDSAESSW
Trigger: CCAGCTGCTCTCTGCTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACATCATATTTAATTCTGCTAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR GCA 90 bp ACTTTTCCCAACCTACATGAAAATCCAAGATATGTGTTGCCCAAATaGATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCC +
Preference number: 1 (lower is better)
Translates to: TFPNLHENPRYVLPK*IQTMALHLQTSGSP
Trigger: GGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTTGGGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR TCA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGAATTGCCCATCTCGCCTaGCCATGCTGTGATGTGTCA +
Preference number: 2 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGIAHLA*PCCDVS
Trigger: TGACACATCACAGCATGGTCAGGCGAGATGGGCAAT...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR CCA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGATCAGCAGAGAGCAGCTaGGCAAGTCTAGCACTTCCT +
Preference number: 2 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGSAESS*ASLALP
Trigger: AGGAAGTGCTAGACTTGCCCAGCTGCTCTCTGCTGA...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR TCA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCGCCTGACCATGCTGTaGTGTGTCACACGATTCAGC +
Preference number: 2 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDRLTML*CVTRFS
Trigger: GCTGAATCGTGTGACACATCACAGCATGGTCAGGCG...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR TCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACACAGTCAACACACTACTaGATTGCTCAGTCATGGGGT +
Preference number: 2 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTQSTHY*IAQSWG
Trigger: ACCCCATGACTGAGCAATTCAGTAGTGTGTTGACTG...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638473.1
3UTR-3UTR CCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCAGTCTAGGTAGCCATTaGGTTTCTCCTCAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: AFKCGHLKQCKIASANIISLGSH*VSPQQC
Trigger: ACACTGCTGAGGAGAAACCCAATGGCTACCTAGACT...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACAACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGT +
Preference number: 2 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTTSCQC*YPASQS
Trigger: ACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGT...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGT +
Preference number: 2 (lower is better)
Translates to: AFKCGHLKQCKIASANIITSCQC*YPASQS
Trigger: ACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGT...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATGCTTGCCAAGAGCCTaGCAGTCACTCAAATTGTTA +
Preference number: 2 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTCLPRA*QSLKLL
Trigger: TAACAATTTGAGTGACTGTCAGGCTCTTGGCAAGCA...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCTCTAAGCAGTCTGAATaGTCGCAGTACAGACAATCC +
Preference number: 2 (lower is better)
Translates to: AFKCGHLKQCKIASANIISKQSE*SQYRQS
Trigger: GGATTGTCTGTACTGCGATCATTCAGACTGCTTAGA...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638473.1
3UTR-3UTR TCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCCAAAACACCTTTGTCTaGTCATTTGAGAGACAGGGT +
Preference number: 2 (lower is better)
Translates to: AFKCGHLKQCKIASANIIQNTFV*SFERQG
Trigger: ACCCTGTCTCTCAAATGATCAGACAAAGGTGTTTTG...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGCATGGACCTCCTCTTaGAGTCCAGTTGACACATAT +
Preference number: 2 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEAWTSS*SPVDTY
Trigger: ATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGACTATCAGCTTTGCTaGGAGCAGAAGATGGCAAAG +
Preference number: 2 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEDYQLC*EQKMAK
Trigger: CTTTGCCATCTTCTGCTCTCAGCAAAGCTGATAGTC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACAACCAGATCTTCCCTTTaGCTTCTTCTGTACTTACTT +
Preference number: 2 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTTRSSL*LLLYLL
Trigger: AAGTAAGTACAGAAGAAGGCAAAGGGAAGATCTGGT...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGCTAGGGTCATGTATTTaGCCTGGTCATCCGTTTCCA +
Preference number: 2 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTELGSCI*PGHPFP
Trigger: TGGAAACGGATGACCAGGGCAAATACATGACCCTAG...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGCATGGACCTCCTCTTaGAGTCCAGTTGACACATAT +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNAWTSS*SPVDTY
Trigger: ATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGACTATCAGCTTTGCTaGGAGCAGAAGATGGCAAAG +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNDYQLC*EQKMAK
Trigger: CTTTGCCATCTTCTGCTCTCAGCAAAGCTGATAGTC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCATCTGAAATTACGCTaGATGATAGCGGCAGACACC +
Preference number: 2 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELHLKLR*MIAADT
Trigger: GGTGTCTGCCGCTATCATTCAGCGTAATTTCAGATG...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCATCTGAAATTACGCTaGATGATAGCGGCAGACACC +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNHLKLR*MIAADT
Trigger: GGTGTCTGCCGCTATCATTCAGCGTAATTTCAGATG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATCCACCGAGCTTGCTTaGCAAGAGCCTGACAGTCAC +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLSTELA*QEPDSH
Trigger: GTGACTGTCAGGCTCTTGGCAAGCAAGCTCGGTGGA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGGCCACTTGAAGCAGTaGAAGATAGCCAGCGCCAAC +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLGHLKQ*KIASAN
Trigger: GTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGAGTCTAGGTAGCCATTaGGTTTCTCCTCAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELSLGSH*VSPQQC
Trigger: ACACTGCTGAGGAGAAACCCAATGGCTACCTAGACT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAGTCTAGGTAGCCATTaGGTTTCTCCTCAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNSLGSH*VSPQQC
Trigger: ACACTGCTGAGGAGAAACCCAATGGCTACCTAGACT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGGAATTTGTTTGCTaGGCGAGGTATGGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTELEFVC*ARYGFL
Trigger: CAGAAACCCATACCTCGCCCAGCAAACAAATTCCAA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGTCATGTATTTGCCCTaGTCATCCGTTTCCACCATC +
Preference number: 2 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTVMYLP*SSVSTI
Trigger: GATGGTGGAAACGGATGACCAGGGCAAATACATGAC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTaGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFT*HNYPYSLGSHWVSP
Trigger: AGGAGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR CAA 90 bp GCAGACATAACTTTTCCCAACCTACATGAAAATCCAAGATATGTGTaGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCA +
Preference number: 2 (lower is better)
Translates to: ADITFPNLHENPRYV*PKCIQTMALHLQTS
Trigger: TGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTTGGGAAAAGTTATGTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR TCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCGCATGGACCTCCTCTTaGAGTCCAGTTGACACATAT +
Preference number: 2 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSAWTSS*SPVDTY
Trigger: ATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGC...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGT +
Preference number: 2 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSTSCQC*YPASQS
Trigger: ACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGT...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGT +
Preference number: 2 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELTSCQC*YPASQS
Trigger: ACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGCAAAACACCTTTGTCTaGTCATTTGAGAGACAGGGT +
Preference number: 2 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEQNTFV*SFERQG
Trigger: ACCCTGTCTCTCAAATGATCAGACAAAGGTGTTTTG...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGAACAACATCAACTGTaGTTCCTTCAGATGAGCTGG +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNEQHQL*FLQMSW
Trigger: CCAGCTCATCTGAAGGAAGCACAGTTGATGTTGTTC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGTCACAACCACCCTCATaGCTTCAAACCGGGATAAGG +
Preference number: 2 (lower is better)
Translates to: LLICLCSVVLLGESCTSLSQPPS*LQTGIR
Trigger: CCTTATCCCGGTTTGAAGGCATGAGGGTGGTTGTGA...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
3UTR-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATGCATGGACCTCCTCTTaGAGTCCAGTTGACACATAT +
Preference number: 2 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYAWTSS*SPVDTY
Trigger: ATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGC...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAGAACAACATCAACTGTaGTTCCTTCAGATGAGCTGG +
Preference number: 2 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQEQHQL*FLQMSW
Trigger: CCAGCTCATCTGAAGGAAGCACAGTTGATGTTGTTC...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCATGATAGAGGGAATTaGTCCAACAAGAGCATTCAC +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNHDRGN*SNKSIH
Trigger: GTGAATGCTCTTGTTGGAGCAATTCCCTCTATCATG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTaGGTTTCTCCTCAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSLGSH*VSPQQC
Trigger: ACACTGCTGAGGAGAAACCCAATGGCTACCTAGACT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACAGTACCTACACCACTaGTGGTTCCATTCCCATCTC +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLQYLHH*WFHSHL
Trigger: GAGATGGGAATGGAACCACCAGTGGTGTAGGTACTG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638473.1
3UTR CAA 90 bp ACTAAATTAGAAAACTCATTAGCAGAATTAAATATGATGTTGGGATaGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAG +
Preference number: 2 (lower is better)
Translates to: TKLENSLAELNMMLG*PISPDHAVMCHTIQ
Trigger: CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACATCATATTTAATTCTGCTAATGAGTTTTCTAATTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGCATGGACCTCCTCTTaGAGTCCAGTTGACACATAT +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLAWTSS*SPVDTY
Trigger: ATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGT +
Preference number: 2 (lower is better)
Translates to: LLICLCSVVLLGESCTSLTSCQC*YPASQS
Trigger: ACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCTTTGTCTGATCATTTaGGAGACAGGGTTCTTGTAT +
Preference number: 2 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELLCLII*ETGFLY
Trigger: ATACAAGAACCCTGTCTCTCAAATGATCAGACAAAG...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTCCAGTGTGTTTCCTTaGAATCTAGAGAGATACCAT +
Preference number: 2 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELSSVFP*NLERYH
Trigger: ATGGTATCTCTCTAGATTTCAAGGAAACACACTGGA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGTGCTTGCCAAGAGCCTaGCAGTCACTCAAATTGTTA +
Preference number: 2 (lower is better)
Translates to: LLICLCSVVLLGESCTSLCLPRA*QSLKLL
Trigger: TAACAATTTGAGTGACTGTCAGGCTCTTGGCAAGCA...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
3UTR-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGGCTATATATATATTTaGCCAAACATGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNGYIYI*PNMHHR
Trigger: CCTGTGGTGCATGTTTGGGCAAATATATATATAGCC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGGCTATATATATATTTaGCCAAACATGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTGYIYI*PNMHHR
Trigger: CCTGTGGTGCATGTTTGGGCAAATATATATATAGCC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGTCATGTATTTGCCCTaGTCATCCGTTTCCACCATC +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLVMYLP*SSVSTI
Trigger: GATGGTGGAAACGGATGACCAGGGCAAATACATGAC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGGAAACATACCTACAATaGAGAGAATCACCACCACAA +
Preference number: 2 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELETYLQ*RESPPQ
Trigger: TTGTGGTGGTGATTCTCTCCATTGTAGGTATGTTTC...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGAAACATACCTACAATaGAGAGAATCACCACCACAA +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNETYLQ*RESPPQ
Trigger: TTGTGGTGGTGATTCTCTCCATTGTAGGTATGTTTC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGATAAGAGTTTGGTTTTaGCCTCACATAAATCCAAGG +
Preference number: 2 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELIRVWF*PHINPR
Trigger: CCTTGGATTTATGTGAGGTCAAAACCAAACTCTTAT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACATCTTCATATACAGGCTaGAGTTTAACATCTCGTGAA +
Preference number: 2 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTSSYTG*SLTSRE
Trigger: TTCACGAGATGTTAAACTTCAGCCTGTATATGAAGA...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTGGGGACCATGGAAATaGACTAGAACAAATTTTGTA +
Preference number: 2 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELWGPWK*TRTNFV
Trigger: TACAAAATTTGTTCTAGTGCATTTCCATGGTCCCCA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAATGAATTGGGGACCATaGAAATGCACTAGAACAAAT +
Preference number: 2 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTMNWGP*KCTRTN
Trigger: ATTTGTTCTAGTGCATTTCCATGGTCCCCAATTCAT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTACTGCAGCAGAAAGTaGAACAACTATTCTAAAGCA +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNYCSRK*NNYSKA
Trigger: TGCTTTAGAATAGTTGTTCCACTTTCTGCTGCAGTA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACAAAACACCTTTGTCTaGTCATTTGAGAGACAGGGT +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLQNTFV*SFERQG
Trigger: ACCCTGTCTCTCAAATGATCAGACAAAGGTGTTTTG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGGGCTATATATATATTTaGCCAAACATGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: LLICLCSVVLLGESCTSLGYIYI*PNMHHR
Trigger: CCTGTGGTGCATGTTTGGGCAAATATATATATAGCC...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR-3UTR GCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAAGCTGCTTTTAATTTaGCTTTGTTCTGTAGTACTG +
Preference number: 2 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTKLLLI*LCSVVL
Trigger: CAGTACTACAGAACAAAGGCAAATTAAAAGCAGCTT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGTGAACTTGATCCTTTaGACACATAAAAGTTCACAA +
Preference number: 2 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNVNLIL*THKSSQ
Trigger: TTGTGAACTTTTATGTGTGCAAAGGATCAAGTTCAC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAATCTTCAAAGGCCAATaGACCACTACTGAGAAGGAT +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLIFKGQ*TTTEKD
Trigger: ATCCTTCTCAGTAGTGGTGCATTGGCCTTTGAAGAT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACTTTGTCTGATCATTTaGGAGACAGGGTTCTTGTAT +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLLCLII*ETGFLY
Trigger: ATACAAGAACCCTGTCTCTCAAATGATCAGACAAAG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGGTTTCTGAGGTTTCTTaGATCCAAGTTTCTTCATTG +
Preference number: 2 (lower is better)
Translates to: LLICLCSVVLLGESCTSLVSEVS*IQVSSL
Trigger: CAATGAAGAAACTTGGATCCAAGAAACCTCAGAAAC...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
3UTR-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATCTTCATATACAGGCTaGAGTTTAACATCTCGTGAA +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLSSYTG*SLTSRE
Trigger: TTCACGAGATGTTAAACTTCAGCCTGTATATGAAGA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATGGGGACCATGGAAATaGACTAGAACAAATTTTGTA +
Preference number: 2 (lower is better)
Translates to: SFERQGSCILFLQRKPHLWGPWK*TRTNFV
Trigger: TACAAAATTTGTTCTAGTGCATTTCCATGGTCCCCA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGATCATGTTAGGTAATTaGACAACTTTGCCACTTTGT +
Preference number: 2 (lower is better)
Translates to: LLICLCSVVLLGESCTSLIMLGN*TTLPLC
Trigger: ACAAAGTGGCAAAGTTGTGCAATTACCTAACATGAT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR-3UTR CAA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCGTTTTTCCACCGAGCTaGCTTGCCAAGAGCCTGACA +
Preference number: 3 (lower is better)
Translates to: AFKCGHLKQCKIASANIIVFPPS*LAKSLT
Trigger: TGTCAGGCTCTTGGCAAGCAAGCTCGGTGGAAAAAC...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR TCA 72 bp CCTTCAAAATTTCCCTCCCAGAACCCGCACTCTGGCTaGGATTCCAGTAAGCAATGGAGAAAGTTGAGTGAA +
Preference number: 3 (lower is better)
Translates to: PSKFPSQNPHSG*DSSKQWRKLSE
Trigger: TTCACTCAACTTTCTCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR CAA 90 bp AACCCCAAACTAATTAGATATTCCTTGTCACCAGAAGCCTTGAAAACTGCCCAAAAGTCTAGCACTTCCTaGCCATGGCAGGGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: NPKLIRYSLSPEALKTAQKSSTS*PWQGKE
Trigger: TTCCTTCCCCTGCCATGGCAAGGAAGTGCTAGACTT...TTGGGCAGTTTTCAAGGCTTCTGGTGACAAGGAATATCTAATTAGTTTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR CAA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTAATATGATGTTGGGATaGCCCATCTCGCCTGACCAT +
Preference number: 3 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFNMMLG*PISPDH
Trigger: ATGGTCAGGCGAGATGGGCAATCCCAACATCATATT...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR TCA 72 bp TTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTaGCAGAGAGGTCACTTCACTGTCTTGTATAGGCAC +
Preference number: 3 (lower is better)
Translates to: LSMLIPCFTELQ*QRGHFTVLYRH
Trigger: GTGCCTATACAAGACAGTGAAGTGACCTCTCTGTCACTGCAACTCTGTGAAGCAGGGTATCAACATTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR TCA 72 bp AGAATTAAATATGATGTTGGGATTGCCCATCTCGCCTaGCCATGCTGTGATGTGTCACACGATTCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: RIKYDVGIAHLA*PCCDVSHDSAE
Trigger: CTCTGCTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACATCATATTTAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACACTAGGGTCATGTATTaGCCCTGGTCATCCGTTTCC +
Preference number: 3 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNTRVMY*PWSSVS
Trigger: GGAAACGGATGACCAGGGCAAATACATGACCCTAGT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GATATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGAATTAAATATGATGTaGGGATTGCCCATCTCGCCT +
Preference number: 3 (lower is better)
Translates to: DMCCPNAYRLWPFISKPQELNMM*GLPISP
Trigger: AGGCGAGATGGGCAATCCCAACATCATATTTAATTC...CTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR TCA 72 bp CAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGTTGCAGTGACAGAGAG +
Preference number: 3 (lower is better)
Translates to: QLVIKTATSCQC*YPASQSCSDRE
Trigger: CTCTCTGTCACTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR CCA 72 bp ATCCAAGATATGTGTTGCCCAAATGCATACAGACTATaGCCCTTCATCTCCAAACCTCAGGATCACCCTATT +
Preference number: 3 (lower is better)
Translates to: IQDMCCPNAYRL*PFISKPQDHPI
Trigger: AATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATCTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCATAGACTATCAGCTTaGCTGAGAGCAGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNHRLSA*LRAEDG
Trigger: GCCATCTTCTGCTCTCAGCAAAGCTGATAGTCTATG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGATCCCTGTTGGAAGCTaGCAAAAGACACATACACTG +
Preference number: 3 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEIPVGS*QKTHTL
Trigger: CAGTGTATGTGTCTTTTGCAAGCTTCCAACAGGGAT...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACACAGGATACATCCCTGTaGGAAGCTTGCAAAAGACAC +
Preference number: 3 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTQDTSL*EACKRH
Trigger: GTGTCTTTTGCAAGCTTCCAACAGGGATGTATCCTG...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCAGGATACATCCCTGTaGGAAGCTTGCAAAAGACAC +
Preference number: 3 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNQDTSL*EACKRH
Trigger: GTGTCTTTTGCAAGCTTCCAACAGGGATGTATCCTG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTTAAATGTGGCCACTaGAAGCAGTGCAAGATAGCC +
Preference number: 3 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEFKCGH*KQCKIA
Trigger: GGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTTCCTTGGAATTTGTTaGCTGGGCGAGGTATGGGTT +
Preference number: 3 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELFLGIC*LGEVWV
Trigger: AACCCATACCTCGCCCAGCAAACAAATTCCAAGGAA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGACAATGAACACTAGGTaGATCCGGGACAAAACTAGG +
Preference number: 3 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTETMNTR*IRDKTR
Trigger: CCTAGTTTTGTCCCGGATCAACCTAGTGTTCATTGT...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR TCA 72 bp TTCACGTTTTTCCACCGAGCTTGCTTGCCAAGAGCCTaGCAGTCACTCAAATTGTTAACATCACTAATGTCA +
Preference number: 3 (lower is better)
Translates to: FTFFHRACLPRA*QSLKLLTSLMS
Trigger: TGACATTAGTGATGTTAACAATTTGAGTGACTGTCAGGCTCTTGGCAAGCAAGCTCGGTGGAAAAACGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTTTAAATGTGGCCACTaGAAGCAGTGCAAGATAGCC +
Preference number: 3 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELFKCGH*KQCKIA
Trigger: GGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGACAATCCCTCCACATTaGACAGACCAAGCTCCATTA +
Preference number: 3 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELTIPPH*TDQAPL
Trigger: TAATGGAGCTTGGTCTGTCAAATGTGGAGGGATTGT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638473.1
3UTR GCA 72 bp AACCTACATGAAAATCCAAGATATGTGTTGCCCAAATaGATACAGACTATGGCCCTTCATCTCCAAACCTCA +
Preference number: 3 (lower is better)
Translates to: NLHENPRYVLPK*IQTMALHLQTS
Trigger: TGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGAAAAACAGCAACCTCTaGTCAATGTTGATACCCTGC +
Preference number: 3 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELKNSNL*SMLIPC
Trigger: GCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCCTTTGTCTGATCATTaGAGAGACAGGGTTCTTGTA +
Preference number: 3 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNPLSDH*RDRVLV
Trigger: TACAAGAACCCTGTCTCTCAAATGATCAGACAAAGG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTCTGGCAAAACACCTTaGTCTGATCATTTGAGAGAC +
Preference number: 3 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELSGKTP*SDHLRD
Trigger: GTCTCTCAAATGATCAGACAAAGGTGTTTTGCCAGA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGCATAGACTATCAGCTTaGCTGAGAGCAGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: LLICLCSVVLLGESCTSLHRLSA*LRAEDG
Trigger: GCCATCTTCTGCTCTCAGCAAAGCTGATAGTCTATG...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGCAGGATACATCCCTGTaGGAAGCTTGCAAAAGACAC +
Preference number: 3 (lower is better)
Translates to: LLICLCSVVLLGESCTSLQDTSL*EACKRH
Trigger: GTGTCTTTTGCAAGCTTCCAACAGGGATGTATCCTG...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGGTAATTGCACAACTTaGCCACTTTGTTCATGGCTA +
Preference number: 3 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNGNCTT*PLCSWL
Trigger: TAGCCATGAACAAAGTGGCAAAGTTGTGCAATTACC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR-3UTR CAA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTTCTGGAGCACATGAATaGGATAGGCTGAAAATTATA +
Preference number: 3 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFSGAHE*DRLKII
Trigger: TATAATTTTCAGCCTATCCAATTCATGTGCTCCAGA...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAACCTCTTGTCAATGTaGATACCCTGCTTCACAGAG +
Preference number: 3 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYNLLSM*IPCFTE
Trigger: CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAAAAAACAGCAACCTCTaGTCAATGTTGATACCCTGC +
Preference number: 3 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQKNSNL*SMLIPC
Trigger: GCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCAAAAACAGCAACCTCTaGTCAATGTTGATACCCTGC +
Preference number: 3 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSKNSNL*SMLIPC
Trigger: GCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTT...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGTTACAATGTTCACTTaGCACAACTATCCCTATAGT +
Preference number: 3 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEVTMFT*HNYPYS
Trigger: ACTATAGGGATAGTTGTGCAAAGTGAACATTGTAAC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAGGCTATATATATATTaGCCCAAACATGCACCACAG +
Preference number: 3 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTRLYIY*PKHAPQ
Trigger: CTGTGGTGCATGTTTGGGCAAATATATATATAGCCT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACAGGATACATCCCTGTaGGAAGCTTGCAAAAGACAC +
Preference number: 3 (lower is better)
Translates to: SFERQGSCILFLQRKPHLQDTSL*EACKRH
Trigger: GTGTCTTTTGCAAGCTTCCAACAGGGATGTATCCTG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAATGGACAGAGCAGGTaGAATTCATTCTATCACCAA +
Preference number: 3 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNNGQSR*NSFYHQ
Trigger: TTGGTGATAGAATGAATTCAACCTGCTCTGTCCATT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGATCCAGTGTGTTTCCTaGAAATCTAGAGAGATACCA +
Preference number: 3 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELIQCVS*KSREIP
Trigger: TGGTATCTCTCTAGATTTCAAGGAAACACACTGGAT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAAAAACAGCAACCTCTaGTCAATGTTGATACCCTGC +
Preference number: 3 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYKNSNL*SMLIPC
Trigger: GCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGTTACAATGTTCACTTaGCACAACTATCCCTATAGT +
Preference number: 3 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNVTMFT*HNYPYS
Trigger: ACTATAGGGATAGTTGTGCAAAGTGAACATTGTAAC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCTTGTGAAGAATGGATaGAGTAAAATAGAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNLVKNG*SKIEQH
Trigger: ATGCTGCTCTATTTTACTCAATCCATTCTTCACAAG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATCTGGCAAAACACCTTaGTCTGATCATTTGAGAGAC +
Preference number: 3 (lower is better)
Translates to: SFERQGSCILFLQRKPHLSGKTP*SDHLRD
Trigger: GTCTCTCAAATGATCAGACAAAGGTGTTTTGCCAGA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGAATGGACAGAGCAGGTaGAATTCATTCTATCACCAA +
Preference number: 3 (lower is better)
Translates to: LLICLCSVVLLGESCTSLNGQSR*NSFYHQ
Trigger: TTGGTGATAGAATGAATTCAACCTGCTCTGTCCATT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR TCA 72 bp CTATGGTTTTGCAGACATAACTTTTCCCAACCTACATaGAAATCCAAGATATGTGTTGCCCAAATGCATACA +
Preference number: 3 (lower is better)
Translates to: LWFCRHNFSQPT*KSKICVAQMHT
Trigger: TGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTTGGGAAAAGTTATGTCTGCAAAACCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
3UTR-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAAGGCTATATATATATTaGCCCAAACATGCACCACAG +
Preference number: 3 (lower is better)
Translates to: SFERQGSCILFLQRKPHLRLYIY*PKHAPQ
Trigger: CTGTGGTGCATGTTTGGGCAAATATATATATAGCCT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAATCCAGTGTGTTTCCTaGAAATCTAGAGAGATACCA +
Preference number: 3 (lower is better)
Translates to: SFERQGSCILFLQRKPHLIQCVS*KSREIP
Trigger: TGGTATCTCTCTAGATTTCAAGGAAACACACTGGAT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATCTAGGTTTGAGTGTTaGACCAATGTATCTCCTATT +
Preference number: 3 (lower is better)
Translates to: SFERQGSCILFLQRKPHLSRFEC*TNVSPI
Trigger: AATAGGAGATACATTGGTCAAACACTCAAACCTAGA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR TCA 72 bp AAAGGTTATATTGAGGCAACCATAGTTGGTAGAAAATaGTCTAGGTTTGAGTGTTTGACCAATGTATCTCCT +
Preference number: 3 (lower is better)
Translates to: KGYIEATIVGRK*SRFECLTNVSP
Trigger: AGGAGATACATTGGTCAAACACTCAAACCTAGATCATTTTCTACCAACTATGGTTGCCTCAATATAACCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
3UTR GCA 72 bp GCTCTTTGCTTATTTCAATTCCAGTATTATTGGACATaGAGCTGTCTATCTTATTGCCTTCATGGATTTCTA +
Preference number: 3 (lower is better)
Translates to: ALCLFQFQYYWT*SCLSYCLHGFL
Trigger: TAGAAATCCATGAAGGCAATAAGATAGACAGCTGCATGTCCAATAATACTGGAATTGAAATAAGCAAAGAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638473.1
CDS-3UTR CCA 90 bp ATGTTGGGATTGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAGGAAGCTTTCAGGTCCTaGGGGTACCAACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: MLGLPISPDHAVMCHTIQEAFRS*GYQQCL
Trigger: CAGGCACTGTTGGTACCCCCAGGACCTGAAAGCTTC...CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp ATGTTGGGATTGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAGAACCCGCACTCTGGCTaGGATTCCAGTAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: MLGLPISPDHAVMCHTIQNPHSG*DSSKQW
Trigger: CCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTT...CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp ATGTTGGGATTGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAGTCAGCAGAGAGCAGCTaGGCAAGTCTAGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: MLGLPISPDHAVMCHTIQSAESS*ASLALP
Trigger: AGGAAGTGCTAGACTTGCCCAGCTGCTCTCTGCTGA...CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCGGCCACTTGAAGCAGTaGAAGATAGCCAGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIGHLKQ*KIASAN
Trigger: GTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCC...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCGAAGCTTTCAGGTCCTaGGGGTACCAACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIEAFRS*GYQQCL
Trigger: CAGGCACTGTTGGTACCCCCAGGACCTGAAAGCTTC...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CCA 90 bp CACGATTCAGCAGAGAGCAGCTGGGCAAGTCTAGCACTTCCTTGCCATGGCAGGGCATTTGGAAGACACTaGCCATGTAACAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: HDSAESSWASLALPCHGRAFGRH*PCNRET
Trigger: AGTTTCTCTGTTACATGGCCAGTGTCTTCCAAATGC...CCTGCCATGGCAAGGAAGTGCTAGACTTGCCCAGCTGCTCTCTGCTGAATCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp GATATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGTGCGGCACAAACAGTaGGTCTCTCCTGCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: DMCCPNAYRLWPFISKPQVRHKQ*VSPAFA
Trigger: AGCGAAAGCAGGAGAGACTCACTGTTTGTGCCGCAC...CTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCGTGCATCTTCCCATTTaGTGGAAGCCCTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIVHLPI*WKPWHH
Trigger: ATGGTGCCAGGGCTTCCAGCAAATGGGAAGATGCAC...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGACAGTCAACACACTACTaGATTGCTCAGTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGQSTHY*IAQSWG
Trigger: ACCCCATGACTGAGCAATTCAGTAGTGTGTTGACTG...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATATTGCCCATCTCGCCTaGCCATGCTGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDIAHLA*PCCDVS
Trigger: TGACACATCACAGCATGGTCAGGCGAGATGGGCAAT...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATCCGTTTCTGTGGTGGTaGCCTCTGGGGGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHPFLWW*PLGEVV
Trigger: GACAACTTCCCCCAGAGGGCACCACCACAGAAACGG...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283254.12
CDS-3UTR GCA 90 bp GATATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGATGCTCACGGCTCTTTaGCTTCCAGAGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: DMCCPNAYRLWPFISKPQMLTAL*LPEESS
Trigger: GGAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCAT...CTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCACAACCACCCTCATaGCTTCAAACCGGGATAAGG +
Preference number: 4 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTSQPPS*LQTGIR
Trigger: CCTTATCCCGGTTTGAAGGCATGAGGGTGGTTGTGA...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp ATGTTGGGATTGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAGGTTCTTCCATTGTGTTaGTCAGAATGCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: MLGLPISPDHAVMCHTIQVLPLC*SECWLC
Trigger: GCATAGCCAGCATTCTGACCAACACAATGGAAGAAC...CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACACAGTACCTACACCACTaGTGGTTCCATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTQYLHH*WFHSHL
Trigger: GAGATGGGAATGGAACCACCAGTGGTGTAGGTACTG...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATGTGCGGCACAAACAGTaGGTCTCTCCTGCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHVRHKQ*VSPAFA
Trigger: AGCGAAAGCAGGAGAGACTCACTGTTTGTGCCGCAC...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGCAGTCAACACACTACTaGATTGCTCAGTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLQSTHY*IAQSWG
Trigger: ACCCCATGACTGAGCAATTCAGTAGTGTGTTGACTG...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCCATCTGAAATTACGCTaGATGATAGCGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIHLKLR*MIAADT
Trigger: GGTGTCTGCCGCTATCATTCAGCGTAATTTCAGATG...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACACATCTGAAATTACGCTaGATGATAGCGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTHLKLR*MIAADT
Trigger: GGTGTCTGCCGCTATCATTCAGCGTAATTTCAGATG...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGGACTATCAGCTTTGCTaGGAGCAGAAGATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLDYQLC*EQKMAK
Trigger: CTTTGCCATCTTCTGCTCTCAGCAAAGCTGATAGTC...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGAAGATCCAACATCCTTTaGCCGACCTCTGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGRSNIL*PTSETE
Trigger: TTCAGTTTCAGAGGTCGGGCAAAGGATGTTGGATCT...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGGCCACTTGAAGCAGTaGAAGATAGCCAGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEGHLKQ*KIASAN
Trigger: GTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATGAAGCTTTCAGGTCCTaGGGGTACCAACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHEAFRS*GYQQCL
Trigger: CAGGCACTGTTGGTACCCCCAGGACCTGAAAGCTTC...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp ATGTTGGGATTGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAGAGTAGGAAGTGGTGTTaGTTTCAAAAGCAGAATCGC +
Preference number: 4 (lower is better)
Translates to: MLGLPISPDHAVMCHTIQSRKWC*FQKQNR
Trigger: GCGATTCTGCTTTTGAAACCAACACCACTTCCTACT...CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGCCCTGGCACCATCCTaGATGACATACTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTALAPS*MTYWPD
Trigger: GTCAGGCCAGTATGTCATCCAGGATGGTGCCAGGGC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGGCCCTGGCACCATCCTaGATGACATACTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELALAPS*MTYWPD
Trigger: GTCAGGCCAGTATGTCATCCAGGATGGTGCCAGGGC...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTGTGGTGGTGCCCTCTaGGGGAAGTTGTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNCGGAL*GKLSSR
Trigger: CCTACTGGACAACTTCCCCCAGAGGGCACCACCACA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283254.12
CDS-3UTR CCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGTTGGTCAGAATGCTaGCTATGCTCACGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLCWSEC*LCSRLF
Trigger: AAAGAGCCGTGAGCATAGCCAGCATTCTGACCAACA...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GATATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGCAGTACCTACACCACTaGTGGTTCCATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: DMCCPNAYRLWPFISKPQQYLHH*WFHSHL
Trigger: GAGATGGGAATGGAACCACCAGTGGTGTAGGTACTG...CTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGAGTCTAGGTAGCCATTaGGTTTCTCCTCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLSLGSH*VSPQQC
Trigger: ACACTGCTGAGGAGAAACCCAATGGCTACCTAGACT...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GATATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGATCCCTGTCAAACCTTaGTGTGGCTTGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: DMCCPNAYRLWPFISKPQIPVKP*CGLASV
Trigger: AACTGAAGCCAAGCCACATCAAGGTTTGACAGGGAT...CTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGTGCGGCACAAACAGTaGGTCTCTCCTGCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTVRHKQ*VSPAFA
Trigger: AGCGAAAGCAGGAGAGACTCACTGTTTGTGCCGCAC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGGTGCGGCACAAACAGTaGGTCTCTCCTGCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELVRHKQ*VSPAFA
Trigger: AGCGAAAGCAGGAGAGACTCACTGTTTGTGCCGCAC...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTCAGTCAACACACTACTaGATTGCTCAGTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLQSTHY*IAQSWG
Trigger: ACCCCATGACTGAGCAATTCAGTAGTGTGTTGACTG...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGATGGCACCGAGTTCTaGGTAGCCAAGAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWDGTEF*VAKSIG
Trigger: GCCAATGCTCTTGGCTACTCAGAACTCGGTGCCATC...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTGATGGCACCGAGTTCTaGGTAGCCAAGAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSDGTEF*VAKSIG
Trigger: GCCAATGCTCTTGGCTACTCAGAACTCGGTGCCATC...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAGATGGCACCGAGTTCTaGGTAGCCAAGAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLDGTEF*VAKSIG
Trigger: GCCAATGCTCTTGGCTACTCAGAACTCGGTGCCATC...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGGATGGCACCGAGTTCTaGGTAGCCAAGAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQDGTEF*VAKSIG
Trigger: GCCAATGCTCTTGGCTACTCAGAACTCGGTGCCATC...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCAGATCAACCAGAAGATaGGACAGACCAACAGCACAT +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIRSTRR*DRPTAH
Trigger: ATGTGCTGTTGGTCTGTCTCATCTTCTGGTTGATCT...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTTGGTGGTGCCTGGCCTaGCTAACGTTACTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSWWCLA*LTLLLR
Trigger: ACGCAACAGTAACGTTAGTCAGGCCAGGCACCACCA...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638473.1
CDS-3UTR TCA 90 bp ATGTTGGGATTGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAGTGTCACCAGAAGCCTTaGAAACTGCCCAATATTTAT +
Preference number: 4 (lower is better)
Translates to: MLGLPISPDHAVMCHTIQCHQKP*KLPNIY
Trigger: ATAAATATTGGGCAGTTTTCAAGGCTTCTGGTGACA...CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACAAGATCCAACATCCTTTaGCCGACCTCTGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTRSNIL*PTSETE
Trigger: TTCAGTTTCAGAGGTCGGGCAAAGGATGTTGGATCT...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR GCA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTTTGTGTTGGTCAGAATaGTGGCTATGCTCACGGCTC +
Preference number: 4 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFLCWSE*WLCSRL
Trigger: GAGCCGTGAGCATAGCCAGCATTCTGACCAACACAA...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACAGAACAACATCAACTGTaGTTCCTTCAGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTEQHQL*FLQMSW
Trigger: CCAGCTCATCTGAAGGAAGCACAGTTGATGTTGTTC...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACATCCACCGAGCTTGCTTaGCAAGAGCCTGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTSTELA*QEPDSH
Trigger: GTGACTGTCAGGCTCTTGGCAAGCAAGCTCGGTGGA...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTCCACCGAGCTTGCTTaGCAAGAGCCTGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELSTELA*QEPDSH
Trigger: GTGACTGTCAGGCTCTTGGCAAGCAAGCTCGGTGGA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTCCACCGAGCTTGCTTaGCAAGAGCCTGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNSTELA*QEPDSH
Trigger: GTGACTGTCAGGCTCTTGGCAAGCAAGCTCGGTGGA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTGGCCACTTGAAGCAGTaGAAGATAGCCAGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSGHLKQ*KIASAN
Trigger: GTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCC...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTGAAGCTTTCAGGTCCTaGGGGTACCAACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSEAFRS*GYQQCL
Trigger: CAGGCACTGTTGGTACCCCCAGGACCTGAAAGCTTC...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGGAAGCTTTCAGGTCCTaGGGGTACCAACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELEAFRS*GYQQCL
Trigger: CAGGCACTGTTGGTACCCCCAGGACCTGAAAGCTTC...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACAAAAAGCAGAATCGCTTaGGGGCCACTGCAAACATTT +
Preference number: 4 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTKSRIA*GPLQTF
Trigger: AAATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTT...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGCTTCAGATTCGGATTTaGGAAAGCTGTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLLQIRI*ESCLSL
Trigger: GAGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAG...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAGCCCTGGCACCATCCTaGATGACATACTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQALAPS*MTYWPD
Trigger: GTCAGGCCAGTATGTCATCCAGGATGGTGCCAGGGC...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCTTCCGTTTCTGTGGTaGTGCCCTCTGGGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSLPFLW*CPLGEV
Trigger: AACTTCCCCCAGAGGGCACCACCACAGAAACGGAAG...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283254.12
CDS-3UTR CCA 90 bp GATATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGTGTTGGTCAGAATGCTaGCTATGCTCACGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: DMCCPNAYRLWPFISKPQCWSEC*LCSRLF
Trigger: AAAGAGCCGTGAGCATAGCCAGCATTCTGACCAACA...CTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCGTTCTTCCATTGTGTTaGTCAGAATGCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIVLPLC*SECWLC
Trigger: GCATAGCCAGCATTCTGACCAACACAATGGAAGAAC...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGCTTCCGTTTCTGTGGTaGTGCCCAAGGAAACCACAC +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTELPFLW*CPRKPH
Trigger: GTGTGGTTTCCTTGGGCACCACCACAGAAACGGAAG...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCTCTACTATGAATCCTTaGCAGGTATCTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIISTMNP*QVSHPC
Trigger: ACAGGGATGAGATACCTGTCAAGGATTCATAGTAGA...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638473.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACATGGCACCATCCTGGATaGCATACTGGCCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTWHHPG*HTGLTN
Trigger: GTTAGTCAGGCCAGTATGTCATCCAGGATGGTGCCA...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTGGCACCATCCTGGATaGCATACTGGCCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNWHHPG*HTGLTN
Trigger: GTTAGTCAGGCCAGTATGTCATCCAGGATGGTGCCA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGCAAAACACCTTTGTCTaGTCATTTGAGAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLQNTFV*SFERQG
Trigger: ACCCTGTCTCTCAAATGATCAGACAAAGGTGTTTTG...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGTGCATCTTCCCATTTaGTGGAAGCCCTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNVHLPI*WKPWHH
Trigger: ATGGTGCCAGGGCTTCCAGCAAATGGGAAGATGCAC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGGTGCATCTTCCCATTTaGTGGAAGCCCTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQVHLPI*WKPWHH
Trigger: ATGGTGCCAGGGCTTCCAGCAAATGGGAAGATGCAC...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGGTGCATCTTCCCATTTaGTGGAAGCCCTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELVHLPI*WKPWHH
Trigger: ATGGTGCCAGGGCTTCCAGCAAATGGGAAGATGCAC...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGATGCTCACGGCTCTTTaGCTTCCAGAGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWMLTAL*LPEESS
Trigger: GGAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCAT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGATGCTCACGGCTCTTTaGCTTCCAGAGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELMLTAL*LPEESS
Trigger: GGAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCAT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTGTTGGTCAGAATaGTGGCTATGCTCACGGCTC +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTELCWSE*WLCSRL
Trigger: GAGCCGTGAGCATAGCCAGCATTCTGACCAACACAA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTCACAACCACCCTCATaGCTTCAAACCGGGATAAGG +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTESQPPS*LQTGIR
Trigger: CCTTATCCCGGTTTGAAGGCATGAGGGTGGTTGTGA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACACATGATAGAGGGAATTaGTCCAACAAGAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTHDRGN*SNKSIH
Trigger: GTGAATGCTCTTGTTGGAGCAATTCCCTCTATCATG...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATCCACCGAGCTTGCTTaGCAAGAGCCTGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQSTELA*QEPDSH
Trigger: GTGACTGTCAGGCTCTTGGCAAGCAAGCTCGGTGGA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTGGTGCCGTTACTGTTaGGTCGCTCTCCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQWCRYC*VALHVC
Trigger: ACAGACATGGAGAGCGACGCAACAGTAACGGCACCA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409101.7
CDS-3UTR GCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCCGTTTCTGTGGTGGTaGCCAAGGAAACCACACCAT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSPFLWW*PRKPHH
Trigger: ATGGTGTGGTTTCCTTGGGCACCACCACAGAAACGG...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGCCGTTTCTGTGGTGGTaGCCAAGGAAACCACACCAT +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWPFLWW*PRKPHH
Trigger: ATGGTGTGGTTTCCTTGGGCACCACCACAGAAACGG...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGATGTCAAACCTTGATGTaGCTTGGCTTCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGCQTLM*LGFSFL
Trigger: AAGAAAACTGAAGCCAAGCCACATCAAGGTTTGACA...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATAAAAGCAGAATCGCTTaGGGGCCACTGCAAACATTT +
Preference number: 4 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDKSRIA*GPLQTF
Trigger: AAATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTT...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGAGTAGGAAGTGGTGTTaGTTTCAAAAGCAGAATCGC +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLSRKWC*FQKQNR
Trigger: GCGATTCTGCTTTTGAAACCAACACCACTTCCTACT...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CCA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATGTCTGTTTCCATCCATaGAGAAAAGGAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDVCFHP*RKGSCF
Trigger: GAAGCAGCTTCCTTTTCTCCATGGATGGAAACAGAC...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGCAGTACCTACACCACTaGTGGTTCCATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEQYLHH*WFHSHL
Trigger: GAGATGGGAATGGAACCACCAGTGGTGTAGGTACTG...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACTTCCGTTTCTGTGGTaGTGCCGTTACTGTTGCGTC +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLLPFLW*CRYCCV
Trigger: GACGCAACAGTAACGGCACCACCACAGAAACGGAAG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409101.7
CDS-3UTR CCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGCTTCCGTTTCTGTGGTaGTGCCCAAGGAAACCACAC +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQLPFLW*CPRKPH
Trigger: GTGTGGTTTCCTTGGGCACCACCACAGAAACGGAAG...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp AACCCCAAACTAATTAGATATTCCTTGTCACCAGAAGCCTTGAAAACTGCCCAAAGCACTTCCTTGCCATaGCAGGGGAAGGAACATAGC +
Preference number: 4 (lower is better)
Translates to: NPKLIRYSLSPEALKTAQSTSLP*QGKEHS
Trigger: GCTATGTTCCTTCCCCTGCCATGGCAAGGAAGTGCT...TTGGGCAGTTTTCAAGGCTTCTGGTGACAAGGAATATCTAATTAGTTTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTAGTAGTCTTGAGTCATaGGTCGAAATAGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLSSLES*VEIETG
Trigger: TCCTGTCTCTATTTCGACTCATGACTCAAGACTACT...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATGTGCGGCACAAACAGTaGGTCTCTCCTGCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYVRHKQ*VSPAFA
Trigger: AGCGAAAGCAGGAGAGACTCACTGTTTGTGCCGCAC...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATGATGGCACCGAGTTCTaGGTAGCCAAGAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYDGTEF*VAKSIG
Trigger: GCCAATGCTCTTGGCTACTCAGAACTCGGTGCCATC...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATGCATGGACCTCCTCTTaGAGTCCAGTTGACACATAT +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHAWTSS*SPVDTY
Trigger: ATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGC...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGCTTTGTCTGATCATTTaGGAGACAGGGTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLLCLII*ETGFLY
Trigger: ATACAAGAACCCTGTCTCTCAAATGATCAGACAAAG...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTTCCAGAATCCTCTCTaGTTATGCCTCCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNFQNPL*LCLRFL
Trigger: CAGGAAGCGGAGGCATAAGCAGAGAGGATTCTGGAA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283254.12
CDS-3UTR GCA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTCTTGGCTTTCTCTTCTaGAGCACGTTTTTCGATAGC +
Preference number: 4 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFLGFLF*STFFDS
Trigger: GCTATCGAAAAACGTGCTGCAGAAGAGAAAGCCAAG...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCATGCTCACGGCTCTTTaGCTTCCAGAGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSMLTAL*LPEESS
Trigger: GGAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCAT...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTTTGTGTTGGTCAGAATaGTGGCTATGCTCACGGCTC +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSLCWSE*WLCSRL
Trigger: GAGCCGTGAGCATAGCCAGCATTCTGACCAACACAA...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTATTGTGTTGGTCAGAATaGTGGCTATGCTCACGGCTC +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLLCWSE*WLCSRL
Trigger: GAGCCGTGAGCATAGCCAGCATTCTGACCAACACAA...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTTGTGTTGGTCAGAATaGTGGCTATGCTCACGGCTC +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNLCWSE*WLCSRL
Trigger: GAGCCGTGAGCATAGCCAGCATTCTGACCAACACAA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGACTTGAGAACCATTTCTaGTGTGAAAATCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGLENHF*CENPSK
Trigger: TTTACTGGGATTTTCACAGCAGAAATGGTTCTCAAG...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGTCCACCGAGCTTGCTTaGCAAGAGCCTGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLSTELA*QEPDSH
Trigger: GTGACTGTCAGGCTCTTGGCAAGCAAGCTCGGTGGA...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATCTAGGGTCATGTATTTaGCCTGGTCATCCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHLGSCI*PGHPFP
Trigger: TGGAAACGGATGACCAGGGCAAATACATGACCCTAG...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCGGCTATATATATATTTaGCCAAACATGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIGYIYI*PNMHHR
Trigger: CCTGTGGTGCATGTTTGGGCAAATATATATATAGCC...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGCCCAGCATCCAAGATaGTTAGGGTATAACGTGTCT +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEAQHPR*LGYNVS
Trigger: AGACACGTTATACCCTAACCATCTTGGATGCTGGGC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283254.12
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATGAAGCTTTCAGGTCCTaGGGGTACCAACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYEAFRS*GYQQCL
Trigger: CAGGCACTGTTGGTACCCCCAGGACCTGAAAGCTTC...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGATATCTTGTTCCTTTTTaGGCTTCTTGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGYLVPF*ASWLSL
Trigger: AAGAGAAAGCCAAGAAGCCCAAAAAGGAACAAGATA...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTCTTCAGATTCGGATTTaGGAAAGCTGTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFLQIRI*ESCLSL
Trigger: GAGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAG...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGCCCTGGCACCATCCTaGATGACATACTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLALAPS*MTYWPD
Trigger: GTCAGGCCAGTATGTCATCCAGGATGGTGCCAGGGC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTGTTGGTCAGAATGCTaGCTATGCTCACGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTECWSEC*LCSRLF
Trigger: AAAGAGCCGTGAGCATAGCCAGCATTCTGACCAACA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCAGTACCTACACCACTaGTGGTTCCATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSQYLHH*WFHSHL
Trigger: GAGATGGGAATGGAACCACCAGTGGTGTAGGTACTG...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGCAGTACCTACACCACTaGTGGTTCCATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWQYLHH*WFHSHL
Trigger: GAGATGGGAATGGAACCACCAGTGGTGTAGGTACTG...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGTCATGTATTTGCCCTaGTCATCCGTTTCCACCATC +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEVMYLP*SSVSTI
Trigger: GATGGTGGAAACGGATGACCAGGGCAAATACATGAC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGATCCCTGTCAAACCTTaGTGTGGCTTGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELIPVKP*CGLASV
Trigger: AACTGAAGCCAAGCCACATCAAGGTTTGACAGGGAT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGATCCCTGTCAAACCTTaGTGTGGCTTGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWIPVKP*CGLASV
Trigger: AACTGAAGCCAAGCCACATCAAGGTTTGACAGGGAT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR TCA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTAGTAGTCTTGAGTCATaGGTCGAAATAGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFSSLES*VEIETG
Trigger: TCCTGTCTCTATTTCGACTCATGACTCAAGACTACT...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGTGCGGCACAAACAGTaGGTCTCTCCTGCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLVRHKQ*VSPAFA
Trigger: AGCGAAAGCAGGAGAGACTCACTGTTTGTGCCGCAC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTGATGACATACTGGCCTaGCTAACGTTACTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSDDILA*LTLLLR
Trigger: ACGCAACAGTAACGTTAGTCAGGCCAGTATGTCATC...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAGATGACATACTGGCCTaGCTAACGTTACTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLDDILA*LTLLLR
Trigger: ACGCAACAGTAACGTTAGTCAGGCCAGTATGTCATC...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGATGACATACTGGCCTaGCTAACGTTACTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTDDILA*LTLLLR
Trigger: ACGCAACAGTAACGTTAGTCAGGCCAGTATGTCATC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTGGCACCATCCTGGATaGCATACTGGCCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYWHHPG*HTGLTN
Trigger: GTTAGTCAGGCCAGTATGTCATCCAGGATGGTGCCA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCAGTCAACACACTACTaGATTGCTCAGTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSQSTHY*IAQSWG
Trigger: ACCCCATGACTGAGCAATTCAGTAGTGTGTTGACTG...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTCTAAGCAGTCTGAATaGTCGCAGTACAGACAATCC +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHSKQSE*SQYRQS
Trigger: GGATTGTCTGTACTGCGATCATTCAGACTGCTTAGA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGATGTCCGTAATGATTTaGTGGCACCGAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEMSVMI*WHRVLS
Trigger: ACTCAGAACTCGGTGCCATCAAATCATTACGGACAT...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTGCTTGCCAAGAGCCTaGCAGTCACTCAAATTGTTA +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTECLPRA*QSLKLL
Trigger: TAACAATTTGAGTGACTGTCAGGCTCTTGGCAAGCA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACACATCTGAAATTACGCTaGATGATAGCGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTHLKLR*MIAADT
Trigger: GGTGTCTGCCGCTATCATTCAGCGTAATTTCAGATG...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGCATCTGAAATTACGCTaGATGATAGCGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWHLKLR*MIAADT
Trigger: GGTGTCTGCCGCTATCATTCAGCGTAATTTCAGATG...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTETSCQC*YPASQS
Trigger: ACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGT...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGACTATCAGCTTTGCTaGGAGCAGAAGATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTDYQLC*EQKMAK
Trigger: CTTTGCCATCTTCTGCTCTCAGCAAAGCTGATAGTC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCAAACTCTGTCACATATaGCATCACAATGACACTGAA +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIKLCHI*HHNDTE
Trigger: TTCAGTGTCATTGTGATGGCATATGTGACAGAGTTT...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638473.1
CDS-3UTR GCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTATCGCTTGGGGGCCACTaGAAACATTTATTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLSLGGH*KHLFLR
Trigger: TCTGAGGAATAAATGTTTGCAGTGGCCCCCAAGCGA...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTCGCTTGGGGGCCACTaGAAACATTTATTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELSLGGH*KHLFLR
Trigger: TCTGAGGAATAAATGTTTGCAGTGGCCCCCAAGCGA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGTCGCTTGGGGGCCACTaGAAACATTTATTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWSLGGH*KHLFLR
Trigger: TCTGAGGAATAAATGTTTGCAGTGGCCCCCAAGCGA...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp AACCCCAAACTAATTAGATATTCCTTGTCACCAGAAGCCTTGAAAACTGCCCAATCGCTTGGGGGCCACTaGAAACATTTATTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: NPKLIRYSLSPEALKTAQSLGGH*KHLFLR
Trigger: TCTGAGGAATAAATGTTTGCAGTGGCCCCCAAGCGA...TTGGGCAGTTTTCAAGGCTTCTGGTGACAAGGAATATCTAATTAGTTTGGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTTGTGTTGGTCAGAATaGTGGCTATGCTCACGGCTC +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSLCWSE*WLCSRL
Trigger: GAGCCGTGAGCATAGCCAGCATTCTGACCAACACAA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACACAGTATTATTGGACATaGAGCTGTCTATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTQYYWT*SCLSYC
Trigger: GCAATAAGATAGACAGCTGCATGTCCAATAATACTG...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGCAGTATTATTGGACATaGAGCTGTCTATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLQYYWT*SCLSYC
Trigger: GCAATAAGATAGACAGCTGCATGTCCAATAATACTG...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATGAACAACATCAACTGTaGTTCCTTCAGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHEQHQL*FLQMSW
Trigger: CCAGCTCATCTGAAGGAAGCACAGTTGATGTTGTTC...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTCACAACCACCCTCATaGCTTCAAACCGGGATAAGG +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSSQPPS*LQTGIR
Trigger: CCTTATCCCGGTTTGAAGGCATGAGGGTGGTTGTGA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCTAGGGTCATGTATTTaGCCTGGTCATCCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNLGSCI*PGHPFP
Trigger: TGGAAACGGATGACCAGGGCAAATACATGACCCTAG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACTAGGGTCATGTATTTaGCCTGGTCATCCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLLGSCI*PGHPFP
Trigger: TGGAAACGGATGACCAGGGCAAATACATGACCCTAG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGCCGTTTCTGTGGTGGTaGCCAAGGAAACCACACCAT +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLPFLWW*PRKPHH
Trigger: ATGGTGTGGTTTCCTTGGGCACCACCACAGAAACGG...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTTCCAAGTCACTATTTaGCTTTGGTTTGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLFQVTI*LWFVLI
Trigger: GATGAGAACAAACCAAAGCCAAATAGTGACTTGGAA...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTTGTTGGTCAGAATGCTaGCTATGCTCACGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSCWSEC*LCSRLF
Trigger: AAAGAGCCGTGAGCATAGCCAGCATTCTGACCAACA...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGTTCTTCCATTGTGTTaGTCAGAATGCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEVLPLC*SECWLC
Trigger: GCATAGCCAGCATTCTGACCAACACAATGGAAGAAC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCCAATTCCAGTATTATTaGACATGCAGCTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIQFQYY*TCSCLS
Trigger: AGATAGACAGCTGCATGTCCAATAATACTGGAATTG...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGCAATTCCAGTATTATTaGACATGCAGCTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLQFQYY*TCSCLS
Trigger: AGATAGACAGCTGCATGTCCAATAATACTGGAATTG...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCGTTTCTGAGGTTTCTTaGATCCAAGTTTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIVSEVS*IQVSSL
Trigger: CAATGAAGAAACTTGGATCCAAGAAACCTCAGAAAC...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGGTCATGTATTTGCCCTaGTCATCCGTTTCCACCATC +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQVMYLP*SSVSTI
Trigger: GATGGTGGAAACGGATGACCAGGGCAAATACATGAC...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTCATGTATTTGCCCTaGTCATCCGTTTCCACCATC +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWVMYLP*SSVSTI
Trigger: GATGGTGGAAACGGATGACCAGGGCAAATACATGAC...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAATCCCTGTCAAACCTTaGTGTGGCTTGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQIPVKP*CGLASV
Trigger: AACTGAAGCCAAGCCACATCAAGGTTTGACAGGGAT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR TCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTCTACTATGAATCCTTaGCAGGTATCTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHSTMNP*QVSHPC
Trigger: ACAGGGATGAGATACCTGTCAAGGATTCATAGTAGA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR TCA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATATTCACCAAATAAAATaGGCCCAAGAAAATGACCAG +
Preference number: 4 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDIHQIK*AQENDQ
Trigger: CTGGTCATTTTCTTGGGCTCATTTTATTTGGTGAAT...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCGATGACATACTGGCCTaGCTAACGTTACTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSDDILA*LTLLLR
Trigger: ACGCAACAGTAACGTTAGTCAGGCCAGTATGTCATC...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATGGCACCATCCTGGATaGCATACTGGCCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLWHHPG*HTGLTN
Trigger: GTTAGTCAGGCCAGTATGTCATCCAGGATGGTGCCA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAGTCAACACACTACTaGATTGCTCAGTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQQSTHY*IAQSWG
Trigger: ACCCCATGACTGAGCAATTCAGTAGTGTGTTGACTG...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCAGTCAACACACTACTaGATTGCTCAGTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSQSTHY*IAQSWG
Trigger: ACCCCATGACTGAGCAATTCAGTAGTGTGTTGACTG...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGTCTAAGCAGTCTGAATaGTCGCAGTACAGACAATCC +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWSKQSE*SQYRQS
Trigger: GGATTGTCTGTACTGCGATCATTCAGACTGCTTAGA...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTCTAAGCAGTCTGAATaGTCGCAGTACAGACAATCC +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQSKQSE*SQYRQS
Trigger: GGATTGTCTGTACTGCGATCATTCAGACTGCTTAGA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTTCTAAGCAGTCTGAATaGTCGCAGTACAGACAATCC +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSSKQSE*SQYRQS
Trigger: GGATTGTCTGTACTGCGATCATTCAGACTGCTTAGA...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTATGTCCGTAATGATTTaGTGGCACCGAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSMSVMI*WHRVLS
Trigger: ACTCAGAACTCGGTGCCATCAAATCATTACGGACAT...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGAGATCAACCAGAAGATaGGACAGACCAACAGCACAT +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELRSTRR*DRPTAH
Trigger: ATGTGCTGTTGGTCTGTCTCATCTTCTGGTTGATCT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAAGATCAACCAGAAGATaGGACAGACCAACAGCACAT +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLRSTRR*DRPTAH
Trigger: ATGTGCTGTTGGTCTGTCTCATCTTCTGGTTGATCT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAGATCAACCAGAAGATaGGACAGACCAACAGCACAT +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNRSTRR*DRPTAH
Trigger: ATGTGCTGTTGGTCTGTCTCATCTTCTGGTTGATCT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAGATCAACCAGAAGATaGGACAGACCAACAGCACAT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTRSTRR*DRPTAH
Trigger: ATGTGCTGTTGGTCTGTCTCATCTTCTGGTTGATCT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTGCTTGCCAAGAGCCTaGCAGTCACTCAAATTGTTA +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNCLPRA*QSLKLL
Trigger: TAACAATTTGAGTGACTGTCAGGCTCTTGGCAAGCA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTGCTTGCCAAGAGCCTaGCAGTCACTCAAATTGTTA +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQCLPRA*QSLKLL
Trigger: TAACAATTTGAGTGACTGTCAGGCTCTTGGCAAGCA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTGTCATAAAGATGTCTTaGCCTCCAAACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLVIKMS*PPNFFF
Trigger: GAAAAAGAAGTTTGGAGGTCAAGACATCTTTATGAC...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWTSCQC*YPASQS
Trigger: ACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTTSCQC*YPASQS
Trigger: ACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGCTTGGCTTTCTCTTCTaGAGCACGTTTTTCGATAGC +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWLGFLF*STFFDS
Trigger: GCTATCGAAAAACGTGCTGCAGAAGAGAAAGCCAAG...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCTTGGCTTTCTCTTCTaGAGCACGTTTTTCGATAGC +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSLGFLF*STFFDS
Trigger: GCTATCGAAAAACGTGCTGCAGAAGAGAAAGCCAAG...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACTTGGCTTTCTCTTCTaGAGCACGTTTTTCGATAGC +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLLGFLF*STFFDS
Trigger: GCTATCGAAAAACGTGCTGCAGAAGAGAAAGCCAAG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGAGATCCAACATCCTTTaGCCGACCTCTGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWRSNIL*PTSETE
Trigger: TTCAGTTTCAGAGGTCGGGCAAAGGATGTTGGATCT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTACAGTGAGTCTCTCCTaGTTTCGCTGTCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSTVSLS*FRCLQM
Trigger: CATTTGAAGACAGCGAAAGCAGGAGAGACTCACTGT...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGACAGTGAGTCTCTCCTaGTTTCGCTGTCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWTVSLS*FRCLQM
Trigger: CATTTGAAGACAGCGAAAGCAGGAGAGACTCACTGT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAACAGTGAGTCTCTCCTaGTTTCGCTGTCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTTVSLS*FRCLQM
Trigger: CATTTGAAGACAGCGAAAGCAGGAGAGACTCACTGT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGACAGTGAGTCTCTCCTaGTTTCGCTGTCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELTVSLS*FRCLQM
Trigger: CATTTGAAGACAGCGAAAGCAGGAGAGACTCACTGT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp AACCCCAAACTAATTAGATATTCCTTGTCACCAGAAGCCTTGAAAACTGCCCAAACAGTGAGTCTCTCCTaGTTTCGCTGTCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: NPKLIRYSLSPEALKTAQTVSLS*FRCLQM
Trigger: CATTTGAAGACAGCGAAAGCAGGAGAGACTCACTGT...TTGGGCAGTTTTCAAGGCTTCTGGTGACAAGGAATATCTAATTAGTTTGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTTGTGTTGGTCAGAATaGTGGCTATGCTCACGGCTC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYLCWSE*WLCSRL
Trigger: GAGCCGTGAGCATAGCCAGCATTCTGACCAACACAA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTCTTGAGAACCATTTCTaGTGTGAAAATCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLLENHF*CENPSK
Trigger: TTTACTGGGATTTTCACAGCAGAAATGGTTCTCAAG...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAACAACATCAACTGTaGTTCCTTCAGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTEQHQL*FLQMSW
Trigger: CCAGCTCATCTGAAGGAAGCACAGTTGATGTTGTTC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGGAACAACATCAACTGTaGTTCCTTCAGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQEQHQL*FLQMSW
Trigger: CCAGCTCATCTGAAGGAAGCACAGTTGATGTTGTTC...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGATCTTCAAAGGCCAATaGACCACTACTGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEIFKGQ*TTTEKD
Trigger: ATCCTTCTCAGTAGTGGTGCATTGGCCTTTGAAGAT...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATATCTTCAAAGGCCAATaGACCACTACTGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHIFKGQ*TTTEKD
Trigger: ATCCTTCTCAGTAGTGGTGCATTGGCCTTTGAAGAT...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTCACAACCACCCTCATaGCTTCAAACCGGGATAAGG +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSQPPS*LQTGIR
Trigger: CCTTATCCCGGTTTGAAGGCATGAGGGTGGTTGTGA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATCATGATAGAGGGAATTaGTCCAACAAGAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHHDRGN*SNKSIH
Trigger: GTGAATGCTCTTGTTGGAGCAATTCCCTCTATCATG...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCATCATGTTAGGTAATTaGACAACTTTGCCACTTTGT +
Preference number: 4 (lower is better)
Translates to: AFKCGHLKQCKIASANIIIMLGN*TTLPLC
Trigger: ACAAAGTGGCAAAGTTGTGCAATTACCTAACATGAT...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR GCA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGAAGCTGCTTTTAATTTaGCTTTGTTCTGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLKLLLI*LCSVVL
Trigger: CAGTACTACAGAACAAAGGCAAATTAAAAGCAGCTT...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR GCA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATATCCAAGATATGTGTTaGCCAAATGCATACAGACTA +
Preference number: 4 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDIQDMC*PNAYRL
Trigger: TAGTCTGTATGCATTTGGGCAACACATATCTTGGAT...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAAACCTTGATGTGGCTTaGCTTCAGTTTTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLNLDVA*LQFSCS
Trigger: GGAGCAAGAAAACTGAAGCCAAGCCACATCAAGGTT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAACCTTGATGTGGCTTaGCTTCAGTTTTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTNLDVA*LQFSCS
Trigger: GGAGCAAGAAAACTGAAGCCAAGCCACATCAAGGTT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGAAAAGCAGAATCGCTTaGGGGCCACTGCAAACATTT +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELKSRIA*GPLQTF
Trigger: AAATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAAAAAGCAGAATCGCTTaGGGGCCACTGCAAACATTT +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLKSRIA*GPLQTF
Trigger: AAATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAAAAGCAGAATCGCTTaGGGGCCACTGCAAACATTT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTKSRIA*GPLQTF
Trigger: AAATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGAGTAGGAAGTGGTGTTaGTTTCAAAAGCAGAATCGC +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTESRKWC*FQKQNR
Trigger: GCGATTCTGCTTTTGAAACCAACACCACTTCCTACT...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACACTTCAGATTCGGATTTaGGAAAGCTGTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTLQIRI*ESCLSL
Trigger: GAGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAG...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGCTTCAGATTCGGATTTaGGAAAGCTGTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQLQIRI*ESCLSL
Trigger: GAGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAG...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGTCTGTTTCCATCCATaGAGAAAAGGAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTVCFHP*RKGSCF
Trigger: GAAGCAGCTTCCTTTTCTCCATGGATGGAAACAGAC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTCTGTTTCCATCCATaGAGAAAAGGAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWVCFHP*RKGSCF
Trigger: GAAGCAGCTTCCTTTTCTCCATGGATGGAAACAGAC...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAGTCTGTTTCCATCCATaGAGAAAAGGAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLVCFHP*RKGSCF
Trigger: GAAGCAGCTTCCTTTTCTCCATGGATGGAAACAGAC...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTGTCTGTTTCCATCCATaGAGAAAAGGAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSVCFHP*RKGSCF
Trigger: GAAGCAGCTTCCTTTTCTCCATGGATGGAAACAGAC...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTGTTGGTCAGAATGCTaGCTATGCTCACGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSCWSEC*LCSRLF
Trigger: AAAGAGCCGTGAGCATAGCCAGCATTCTGACCAACA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTCTTCCATTGTGTTaGTCAGAATGCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWVLPLC*SECWLC
Trigger: GCATAGCCAGCATTCTGACCAACACAATGGAAGAAC...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCAATTCCAGTATTATTaGACATGCAGCTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDQFQYY*TCSCLS
Trigger: AGATAGACAGCTGCATGTCCAATAATACTGGAATTG...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATCAGTACCTACACCACTaGTGGTTCCATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYQYLHH*WFHSHL
Trigger: GAGATGGGAATGGAACCACCAGTGGTGTAGGTACTG...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTTGGAATTTGTTTGCTaGGCGAGGTATGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELLEFVC*ARYGFL
Trigger: CAGAAACCCATACCTCGCCCAGCAAACAAATTCCAA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTTGGAATTTGTTTGCTaGGCGAGGTATGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQLEFVC*ARYGFL
Trigger: CAGAAACCCATACCTCGCCCAGCAAACAAATTCCAA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAGTCATGTATTTGCCCTaGTCATCCGTTTCCACCATC +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQVMYLP*SSVSTI
Trigger: GATGGTGGAAACGGATGACCAGGGCAAATACATGAC...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAAGTCTAGGTAGCCATTaGGTTTCTCCTCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQSLGSH*VSPQQC
Trigger: ACACTGCTGAGGAGAAACCCAATGGCTACCTAGACT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGTCAGGGCCCCCACAATaGTCTTTAAACCTGGAATTA +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWSGPPQ*SLNLEL
Trigger: TAATTCCAGGTTTAAAGACCATTGTGGGGGCCCTGA...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409101.7
ENST00000640652.1
CDS-3UTR CCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACTTCCGTTTCTGTGGTaGTGCCCAAGGAAACCACAC +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLLPFLW*CPRKPH
Trigger: GTGTGGTTTCCTTGGGCACCACCACAGAAACGGAAG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATATCCCTGTCAAACCTTaGTGTGGCTTGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYIPVKP*CGLASV
Trigger: AACTGAAGCCAAGCCACATCAAGGTTTGACAGGGAT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR TCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTATCTACTATGAATCCTTaGCAGGTATCTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLSTMNP*QVSHPC
Trigger: ACAGGGATGAGATACCTGTCAAGGATTCATAGTAGA...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR TCA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTAGGTATAGATTCCAGTaGATGTGTACTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFRYRFQ*MCTLHS
Trigger: AGAATGTAGAGTACACATTCACTGGAATCTATACCT...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGAGTAGTCTTGAGTCATaGGTCGAAATAGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWSSLES*VEIETG
Trigger: TCCTGTCTCTATTTCGACTCATGACTCAAGACTACT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATCAGTCAACACACTACTaGATTGCTCAGTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYQSTHY*IAQSWG
Trigger: ACCCCATGACTGAGCAATTCAGTAGTGTGTTGACTG...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp AAAAGCTCATTACGCCACAAATCTACAATAATCTTGGGAGATTCCCTTTACTCCTCTAAGCAGTCTGAATaGTCGCAGTACAGACAATCC +
Preference number: 4 (lower is better)
Translates to: KSSLRHKSTIILGDSLYSSKQSE*SQYRQS
Trigger: GGATTGTCTGTACTGCGATCATTCAGACTGCTTAGA...GGAGTAAAGGGAATCTCCCAAGATTATTGTAGATTTGTGGCGTAATGAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCATGTCCGTAATGATTTaGTGGCACCGAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSMSVMI*WHRVLS
Trigger: ACTCAGAACTCGGTGCCATCAAATCATTACGGACAT...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTGCTTGCCAAGAGCCTaGCAGTCACTCAAATTGTTA +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSCLPRA*QSLKLL
Trigger: TAACAATTTGAGTGACTGTCAGGCTCTTGGCAAGCA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGGCATGGACCTCCTCTTaGAGTCCAGTTGACACATAT +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLAWTSS*SPVDTY
Trigger: ATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGC...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAAAACACCTTTGTCTaGTCATTTGAGAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELQNTFV*SFERQG
Trigger: ACCCTGTCTCTCAAATGATCAGACAAAGGTGTTTTG...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGCAAAACACCTTTGTCTaGTCATTTGAGAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWQNTFV*SFERQG
Trigger: ACCCTGTCTCTCAAATGATCAGACAAAGGTGTTTTG...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACACAAAACACCTTTGTCTaGTCATTTGAGAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTQNTFV*SFERQG
Trigger: ACCCTGTCTCTCAAATGATCAGACAAAGGTGTTTTG...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACTAGAAGAGATTCTTTaGTCCTTTCCCAGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLLEEIL*SFPSKP
Trigger: TGGCTTACTGGGAAAGGAGCAAAGAATCTCTTCTAG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR GCA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTAAACTCTGTCACATATaGCATCACAATGACACTGAA +
Preference number: 4 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFKLCHI*HHNDTE
Trigger: TTCAGTGTCATTGTGATGGCATATGTGACAGAGTTT...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCAGATCCAACATCCTTTaGCCGACCTCTGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSRSNIL*PTSETE
Trigger: TTCAGTTTCAGAGGTCGGGCAAAGGATGTTGGATCT...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAACAGTGAGTCTCTCCTaGTTTCGCTGTCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQTVSLS*FRCLQM
Trigger: CATTTGAAGACAGCGAAAGCAGGAGAGACTCACTGT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAATCTTCAAAGGCCAATaGACCACTACTGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLIFKGQ*TTTEKD
Trigger: ATCCTTCTCAGTAGTGGTGCATTGGCCTTTGAAGAT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTATCTTCAAAGGCCAATaGACCACTACTGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSIFKGQ*TTTEKD
Trigger: ATCCTTCTCAGTAGTGGTGCATTGGCCTTTGAAGAT...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATCACAACCACCCTCATaGCTTCAAACCGGGATAAGG +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLSQPPS*LQTGIR
Trigger: CCTTATCCCGGTTTGAAGGCATGAGGGTGGTTGTGA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACACATGATAGAGGGAATTaGTCCAACAAGAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTHDRGN*SNKSIH
Trigger: GTGAATGCTCTTGTTGGAGCAATTCCCTCTATCATG...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATCTAGGGTCATGTATTTaGCCTGGTCATCCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYLGSCI*PGHPFP
Trigger: TGGAAACGGATGACCAGGGCAAATACATGACCCTAG...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTATTCACACACCCATCTaGTCCTCTCAAAAATTATCT +
Preference number: 4 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFIHTPI*SSQKLS
Trigger: AGATAATTTTTGAGAGGAGCAGATGGGTGTGTGAAT...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAAACCTTGATGTGGCTTaGCTTCAGTTTTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQNLDVA*LQFSCS
Trigger: GGAGCAAGAAAACTGAAGCCAAGCCACATCAAGGTT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CCA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATGTCACTATTTGGCTTTaGTTTGTTCTCATCATCATT +
Preference number: 4 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDVTIWL*FVLIII
Trigger: AATGATGATGAGAACAAACCAAAGCCAAATAGTGAC...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAGTAGGAAGTGGTGTTaGTTTCAAAAGCAGAATCGC +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNSRKWC*FQKQNR
Trigger: GCGATTCTGCTTTTGAAACCAACACCACTTCCTACT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTTCAGATTCGGATTTaGGAAAGCTGTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSLQIRI*ESCLSL
Trigger: GAGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAG...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTGTTGGTCAGAATGCTaGCTATGCTCACGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYCWSEC*LCSRLF
Trigger: AAAGAGCCGTGAGCATAGCCAGCATTCTGACCAACA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCGTTCTTCCATTGTGTTaGTCAGAATGCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSVLPLC*SECWLC
Trigger: GCATAGCCAGCATTCTGACCAACACAATGGAAGAAC...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATTGGAATTTGTTTGCTaGGCGAGGTATGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQLEFVC*ARYGFL
Trigger: CAGAAACCCATACCTCGCCCAGCAAACAAATTCCAA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATGAAACATACCTACAATaGAGAGAATCACCACCACAA +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHETYLQ*RESPPQ
Trigger: TTGTGGTGGTGATTCTCTCCATTGTAGGTATGTTTC...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGAGTCTAGGTAGCCATTaGGTTTCTCCTCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLSLGSH*VSPQQC
Trigger: ACACTGCTGAGGAGAAACCCAATGGCTACCTAGACT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp AACCCCAAACTAATTAGATATTCCTTGTCACCAGAAGCCTTGAAAACTGCCCAAAATGCATACAGACTATaGCCCTTCATCTCCAAACCT +
Preference number: 4 (lower is better)
Translates to: NPKLIRYSLSPEALKTAQNAYRL*PFISKP
Trigger: AGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATT...TTGGGCAGTTTTCAAGGCTTCTGGTGACAAGGAATATCTAATTAGTTTGGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp CTTTTCCCAACCTACATGAAAATCCAAGATATGTGTTGCCCAAATGCATACAGATCTACTATGAATCCTTaGCAGGTATCTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LFPTYMKIQDMCCPNAYRSTMNP*QVSHPC
Trigger: ACAGGGATGAGATACCTGTCAAGGATTCATAGTAGA...TCTGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTTGGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATATTCACCAAATAAAATaGGCCCAAGAAAATGACCAG +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHIHQIK*AQENDQ
Trigger: CTGGTCATTTTCTTGGGCTCATTTTATTTGGTGAAT...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGTCTAAGCAGTCTGAATaGTCGCAGTACAGACAATCC +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLSKQSE*SQYRQS
Trigger: GGATTGTCTGTACTGCGATCATTCAGACTGCTTAGA...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTCTAAGCAGTCTGAATaGTCGCAGTACAGACAATCC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSKQSE*SQYRQS
Trigger: GGATTGTCTGTACTGCGATCATTCAGACTGCTTAGA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATATGTCCGTAATGATTTaGTGGCACCGAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYMSVMI*WHRVLS
Trigger: ACTCAGAACTCGGTGCCATCAAATCATTACGGACAT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTCTTCATATACAGGCTaGAGTTTAACATCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHSSYTG*SLTSRE
Trigger: TTCACGAGATGTTAAACTTCAGCCTGTATATGAAGA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGTCATAAAGATGTCTTaGCCTCCAAACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEVIKMS*PPNFFF
Trigger: GAAAAAGAAGTTTGGAGGTCAAGACATCTTTATGAC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATACCTCTTGTCAATGTTaGTACCCTGCTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYTSCQC*YPASQS
Trigger: ACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCTTTGTCTGATCATTTaGGAGACAGGGTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSLCLII*ETGFLY
Trigger: ATACAAGAACCCTGTCTCTCAAATGATCAGACAAAG...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCAAAACACCTTTGTCTaGTCATTTGAGAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSQNTFV*SFERQG
Trigger: ACCCTGTCTCTCAAATGATCAGACAAAGGTGTTTTG...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGACTATCAGCTTTGCTaGGAGCAGAAGATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLDYQLC*EQKMAK
Trigger: CTTTGCCATCTTCTGCTCTCAGCAAAGCTGATAGTC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGTCCAGTGTGTTTCCTTaGAATCTAGAGAGATACCAT +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWSSVFP*NLERYH
Trigger: ATGGTATCTCTCTAGATTTCAAGGAAACACACTGGA...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACATCCAGTGTGTTTCCTTaGAATCTAGAGAGATACCAT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTSSVFP*NLERYH
Trigger: ATGGTATCTCTCTAGATTTCAAGGAAACACACTGGA...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACATATACAGGATCTCGTaGATCAACAGCTGCATACAT +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNIYRIS*INSCIH
Trigger: ATGTATGCAGCTGTTGATTCACGAGATCCTGTATAT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639244.1
CDS-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGCTTGGCTTTCTCTTCTaGAGCACGTTTTTCGATAGC +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLLGFLF*STFFDS
Trigger: GCTATCGAAAAACGTGCTGCAGAAGAGAAAGCCAAG...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATCTTGGCTTTCTCTTCTaGAGCACGTTTTTCGATAGC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYLGFLF*STFFDS
Trigger: GCTATCGAAAAACGTGCTGCAGAAGAGAAAGCCAAG...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATCGCTTGGGGGCCACTaGAAACATTTATTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLSLGGH*KHLFLR
Trigger: TCTGAGGAATAAATGTTTGCAGTGGCCCCCAAGCGA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGAGATCCAACATCCTTTaGCCGACCTCTGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLRSNIL*PTSETE
Trigger: TTCAGTTTCAGAGGTCGGGCAAAGGATGTTGGATCT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGATCCAACATCCTTTaGCCGACCTCTGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYRSNIL*PTSETE
Trigger: TTCAGTTTCAGAGGTCGGGCAAAGGATGTTGGATCT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATCAGTATTATTGGACATaGAGCTGTCTATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHQYYWT*SCLSYC
Trigger: GCAATAAGATAGACAGCTGCATGTCCAATAATACTG...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGACCAGATCTTCCCTTTaGCTTCTTCTGTACTTACTT +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQTRSSL*LLLYLL
Trigger: AAGTAAGTACAGAAGAAGGCAAAGGGAAGATCTGGT...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACACCAGATCTTCCCTTTaGCTTCTTCTGTACTTACTT +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNTRSSL*LLLYLL
Trigger: AAGTAAGTACAGAAGAAGGCAAAGGGAAGATCTGGT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGACCAGATCTTCCCTTTaGCTTCTTCTGTACTTACTT +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELTRSSL*LLLYLL
Trigger: AAGTAAGTACAGAAGAAGGCAAAGGGAAGATCTGGT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCATCTTCAAAGGCCAATaGACCACTACTGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSIFKGQ*TTTEKD
Trigger: ATCCTTCTCAGTAGTGGTGCATTGGCCTTTGAAGAT...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACATGATAGAGGGAATTaGTCCAACAAGAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQHDRGN*SNKSIH
Trigger: GTGAATGCTCTTGTTGGAGCAATTCCCTCTATCATG...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTGGGGACCATGGAAATaGACTAGAACAAATTTTGTA +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEWGPWK*TRTNFV
Trigger: TACAAAATTTGTTCTAGTGCATTTCCATGGTCCCCA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGGGCTATATATATATTTaGCCAAACATGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQGYIYI*PNMHHR
Trigger: CCTGTGGTGCATGTTTGGGCAAATATATATATAGCC...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAGGCTATATATATATTTaGCCAAACATGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLGYIYI*PNMHHR
Trigger: CCTGTGGTGCATGTTTGGGCAAATATATATATAGCC...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTGTCAAACCTTGATGTaGCTTGGCTTCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELCQTLM*LGFSFL
Trigger: AAGAAAACTGAAGCCAAGCCACATCAAGGTTTGACA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTATCTTGTTCCTTTTTaGGCTTCTTGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHYLVPF*ASWLSL
Trigger: AAGAGAAAGCCAAGAAGCCCAAAAAGGAACAAGATA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATCTTCAGATTCGGATTTaGGAAAGCTGTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYLQIRI*ESCLSL
Trigger: GAGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAG...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATGTTCTTCCATTGTGTTaGTCAGAATGCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYVLPLC*SECWLC
Trigger: GCATAGCCAGCATTCTGACCAACACAATGGAAGAAC...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGCAATTCCAGTATTATTaGACATGCAGCTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEQFQYY*TCSCLS
Trigger: AGATAGACAGCTGCATGTCCAATAATACTGGAATTG...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGTTTCTGAGGTTTCTTaGATCCAAGTTTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEVSEVS*IQVSSL
Trigger: CAATGAAGAAACTTGGATCCAAGAAACCTCAGAAAC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTTGGAATTTGTTTGCTaGGCGAGGTATGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYLEFVC*ARYGFL
Trigger: CAGAAACCCATACCTCGCCCAGCAAACAAATTCCAA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGTTGGAATTTGTTTGCTaGGCGAGGTATGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLLEFVC*ARYGFL
Trigger: CAGAAACCCATACCTCGCCCAGCAAACAAATTCCAA...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGAAACATACCTACAATaGAGAGAATCACCACCACAA +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWETYLQ*RESPPQ
Trigger: TTGTGGTGGTGATTCTCTCCATTGTAGGTATGTTTC...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTCAGGGCCCCCACAATaGTCTTTAAACCTGGAATTA +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSGPPQ*SLNLEL
Trigger: TAATTCCAGGTTTAAAGACCATTGTGGGGGCCCTGA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409101.7
ENST00000640652.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTCTACTATGAATCCTTaGCAGGTATCTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSTMNP*QVSHPC
Trigger: ACAGGGATGAGATACCTGTCAAGGATTCATAGTAGA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAGGTATAGATTCCAGTaGATGTGTACTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTRYRFQ*MCTLHS
Trigger: AGAATGTAGAGTACACATTCACTGGAATCTATACCT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAGGTATAGATTCCAGTaGATGTGTACTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNRYRFQ*MCTLHS
Trigger: AGAATGTAGAGTACACATTCACTGGAATCTATACCT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGAGTAGTCTTGAGTCATaGGTCGAAATAGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLSSLES*VEIETG
Trigger: TCCTGTCTCTATTTCGACTCATGACTCAAGACTACT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACATTCACCAAATAAAATaGGCCCAAGAAAATGACCAG +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNIHQIK*AQENDQ
Trigger: CTGGTCATTTTCTTGGGCTCATTTTATTTGGTGAAT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGATTCACCAAATAAAATaGGCCCAAGAAAATGACCAG +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELIHQIK*AQENDQ
Trigger: CTGGTCATTTTCTTGGGCTCATTTTATTTGGTGAAT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATGCTTGCCAAGAGCCTaGCAGTCACTCAAATTGTTA +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLCLPRA*QSLKLL
Trigger: TAACAATTTGAGTGACTGTCAGGCTCTTGGCAAGCA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGTCTTCATATACAGGCTaGAGTTTAACATCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWSSYTG*SLTSRE
Trigger: TTCACGAGATGTTAAACTTCAGCCTGTATATGAAGA...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGTCATAAAGATGTCTTaGCCTCCAAACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTVIKMS*PPNFFF
Trigger: GAAAAAGAAGTTTGGAGGTCAAGACATCTTTATGAC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTTTGTCTGATCATTTaGGAGACAGGGTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQLCLII*ETGFLY
Trigger: ATACAAGAACCCTGTCTCTCAAATGATCAGACAAAG...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATCCAGTGTGTTTCCTTaGAATCTAGAGAGATACCAT +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQSSVFP*NLERYH
Trigger: ATGGTATCTCTCTAGATTTCAAGGAAACACACTGGA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACATAAGAGTTTGGTTTTaGCCTCACATAAATCCAAGG +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNIRVWF*PHINPR
Trigger: CCTTGGATTTATGTGAGGTCAAAACCAAACTCTTAT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGATAAGAGTTTGGTTTTaGCCTCACATAAATCCAAGG +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWIRVWF*PHINPR
Trigger: CCTTGGATTTATGTGAGGTCAAAACCAAACTCTTAT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTGGCTTCAGTTTTCTTaGTCCATAATCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHWLQFS*SIISDK
Trigger: TTTATCAGAGATTATGGAGCAAGAAAACTGAAGCCA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000639244.1
CDS-3UTR GCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCTTGAGAACCATTTCTaGTGTGAAAATCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSLENHF*CENPSK
Trigger: TTTACTGGGATTTTCACAGCAGAAATGGTTCTCAAG...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCTTGAGAACCATTTCTaGTGTGAAAATCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNLENHF*CENPSK
Trigger: TTTACTGGGATTTTCACAGCAGAAATGGTTCTCAAG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACAGTATTATTGGACATaGAGCTGTCTATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLQYYWT*SCLSYC
Trigger: GCAATAAGATAGACAGCTGCATGTCCAATAATACTG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp AACCCCAAACTAATTAGATATTCCTTGTCACCAGAAGCCTTGAAAACTGCCCAACAGTATTATTGGACATaGAGCTGTCTATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: NPKLIRYSLSPEALKTAQQYYWT*SCLSYC
Trigger: GCAATAAGATAGACAGCTGCATGTCCAATAATACTG...TTGGGCAGTTTTCAAGGCTTCTGGTGACAAGGAATATCTAATTAGTTTGGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGAACAACATCAACTGTaGTTCCTTCAGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLEQHQL*FLQMSW
Trigger: CCAGCTCATCTGAAGGAAGCACAGTTGATGTTGTTC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCACCAGATCTTCCCTTTaGCTTCTTCTGTACTTACTT +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSTRSSL*LLLYLL
Trigger: AAGTAAGTACAGAAGAAGGCAAAGGGAAGATCTGGT...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAACCAGATCTTCCCTTTaGCTTCTTCTGTACTTACTT +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQTRSSL*LLLYLL
Trigger: AAGTAAGTACAGAAGAAGGCAAAGGGAAGATCTGGT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATCATGATAGAGGGAATTaGTCCAACAAGAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYHDRGN*SNKSIH
Trigger: GTGAATGCTCTTGTTGGAGCAATTCCCTCTATCATG...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTACAATGTTCACTTTaGACAACTATCCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTELQCSL*TTIPIV
Trigger: GACTATAGGGATAGTTGTGCAAAGTGAACATTGTAA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTTACAATGTTCACTTTaGACAACTATCCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHLQCSL*TTIPIV
Trigger: GACTATAGGGATAGTTGTGCAAAGTGAACATTGTAA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTATGGGGACCATGGAAATaGACTAGAACAAATTTTGTA +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLWGPWK*TRTNFV
Trigger: TACAAAATTTGTTCTAGTGCATTTCCATGGTCCCCA...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGTGAACTTGATCCTTTaGACACATAAAAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEVNLIL*THKSSQ
Trigger: TTGTGAACTTTTATGTGTGCAAAGGATCAAGTTCAC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAAACCTTGATGTGGCTTaGCTTCAGTTTTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLNLDVA*LQFSCS
Trigger: GGAGCAAGAAAACTGAAGCCAAGCCACATCAAGGTT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTGTCAAACCTTGATGTaGCTTGGCTTCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSCQTLM*LGFSFL
Trigger: AAGAAAACTGAAGCCAAGCCACATCAAGGTTTGACA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCTTGTTCCTTTTTaGGCTTCTTGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNYLVPF*ASWLSL
Trigger: AAGAGAAAGCCAAGAAGCCCAAAAAGGAACAAGATA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATGTCACTATTTGGCTTTaGTTTGTTCTCATCATCATT +
Preference number: 4 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHVTIWL*FVLIII
Trigger: AATGATGATGAGAACAAACCAAAGCCAAATAGTGAC...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTTCCAAGTCACTATTTaGCTTTGGTTTGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNFQVTI*LWFVLI
Trigger: GATGAGAACAAACCAAAGCCAAATAGTGACTTGGAA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTTCCAAGTCACTATTTaGCTTTGGTTTGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQFQVTI*LWFVLI
Trigger: GATGAGAACAAACCAAAGCCAAATAGTGACTTGGAA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTAGGAAGTGGTGTTaGTTTCAAAAGCAGAATCGC +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSRKWC*FQKQNR
Trigger: GCGATTCTGCTTTTGAAACCAACACCACTTCCTACT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGAGTAGGAAGTGGTGTTaGTTTCAAAAGCAGAATCGC +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLSRKWC*FQKQNR
Trigger: GCGATTCTGCTTTTGAAACCAACACCACTTCCTACT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACAATTCCAGTATTATTaGACATGCAGCTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLQFQYY*TCSCLS
Trigger: AGATAGACAGCTGCATGTCCAATAATACTGGAATTG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCAATTCCAGTATTATTaGACATGCAGCTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSQFQYY*TCSCLS
Trigger: AGATAGACAGCTGCATGTCCAATAATACTGGAATTG...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACACAATTCCAGTATTATTaGACATGCAGCTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTQFQYY*TCSCLS
Trigger: AGATAGACAGCTGCATGTCCAATAATACTGGAATTG...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTGAGGTTTCTTaGATCCAAGTTTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWVSEVS*IQVSSL
Trigger: CAATGAAGAAACTTGGATCCAAGAAACCTCAGAAAC...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGGTTTCTGAGGTTTCTTaGATCCAAGTTTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQVSEVS*IQVSSL
Trigger: CAATGAAGAAACTTGGATCCAAGAAACCTCAGAAAC...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAGAAACATACCTACAATaGAGAGAATCACCACCACAA +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQETYLQ*RESPPQ
Trigger: TTGTGGTGGTGATTCTCTCCATTGTAGGTATGTTTC...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGATGAATTGGGGACCATaGAAATGCACTAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQMNWGP*KCTRTN
Trigger: ATTTGTTCTAGTGCATTTCCATGGTCCCCAATTCAT...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTACTGCAGCAGAAAGTaGAACAACTATTCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQYCSRK*NNYSKA
Trigger: TGCTTTAGAATAGTTGTTCCACTTTCTGCTGCAGTA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTTACTGCAGCAGAAAGTaGAACAACTATTCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSYCSRK*NNYSKA
Trigger: TGCTTTAGAATAGTTGTTCCACTTTCTGCTGCAGTA...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACATACTGCAGCAGAAAGTaGAACAACTATTCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTYCSRK*NNYSKA
Trigger: TGCTTTAGAATAGTTGTTCCACTTTCTGCTGCAGTA...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTACTGCAGCAGAAAGTaGAACAACTATTCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELYCSRK*NNYSKA
Trigger: TGCTTTAGAATAGTTGTTCCACTTTCTGCTGCAGTA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp CTTTTCCCAACCTACATGAAAATCCAAGATATGTGTTGCCCAAATGCATACAGAGATTCCAGTAAGCAATaGAGAAAGTTGAGTGAACAG +
Preference number: 4 (lower is better)
Translates to: LFPTYMKIQDMCCPNAYRDSSKQ*RKLSEQ
Trigger: CTGTTCACTCAACTTTCTCCATTGCTTACTGGAATC...TCTGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTTGGGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR TCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAATTCACCAAATAAAATaGGCCCAAGAAAATGACCAG +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQIHQIK*AQENDQ
Trigger: CTGGTCATTTTCTTGGGCTCATTTTATTTGGTGAAT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTCTTCATATACAGGCTaGAGTTTAACATCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSSSYTG*SLTSRE
Trigger: TTCACGAGATGTTAAACTTCAGCCTGTATATGAAGA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGCTTTGTCTGATCATTTaGGAGACAGGGTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLLCLII*ETGFLY
Trigger: ATACAAGAACCCTGTCTCTCAAATGATCAGACAAAG...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp CTTTTCCCAACCTACATGAAAATCCAAGATATGTGTTGCCCAAATGCATACAGAACCATCTTTAAAGGTTaGGATGGGTTTAAAATGGCT +
Preference number: 4 (lower is better)
Translates to: LFPTYMKIQDMCCPNAYRTIFKG*DGFKMA
Trigger: AGCCATTTTAAACCCATCTCAACCTTTAAAGATGGT...TCTGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTTGGGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAAAACTCTGTCACATATaGCATCACAATGACACTGAA +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQKLCHI*HHNDTE
Trigger: TTCAGTGTCATTGTGATGGCATATGTGACAGAGTTT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
CDS-3UTR GCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATACCAGATCTTCCCTTTaGCTTCTTCTGTACTTACTT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYTRSSL*LLLYLL
Trigger: AAGTAAGTACAGAAGAAGGCAAAGGGAAGATCTGGT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTTACAATGTTCACTTTaGACAACTATCCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELLQCSL*TTIPIV
Trigger: GACTATAGGGATAGTTGTGCAAAGTGAACATTGTAA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATGGGGACCATGGAAATaGACTAGAACAAATTTTGTA +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQWGPWK*TRTNFV
Trigger: TACAAAATTTGTTCTAGTGCATTTCCATGGTCCCCA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTATCATGTTAGGTAATTaGACAACTTTGCCACTTTGT +
Preference number: 4 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSIMLGN*TTLPLC
Trigger: ACAAAGTGGCAAAGTTGTGCAATTACCTAACATGAT...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGTGAACTTGATCCTTTaGACACATAAAAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTVNLIL*THKSSQ
Trigger: TTGTGAACTTTTATGTGTGCAAAGGATCAAGTTCAC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTGTCAAACCTTGATGTaGCTTGGCTTCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYCQTLM*LGFSFL
Trigger: AAGAAAACTGAAGCCAAGCCACATCAAGGTTTGACA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATATCTTGTTCCTTTTTaGGCTTCTTGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQYLVPF*ASWLSL
Trigger: AAGAGAAAGCCAAGAAGCCCAAAAAGGAACAAGATA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTCACTATTTGGCTTTaGTTTGTTCTCATCATCATT +
Preference number: 4 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWVTIWL*FVLIII
Trigger: AATGATGATGAGAACAAACCAAAGCCAAATAGTGAC...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACGTCACTATTTGGCTTTaGTTTGTTCTCATCATCATT +
Preference number: 4 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNVTIWL*FVLIII
Trigger: AATGATGATGAGAACAAACCAAAGCCAAATAGTGAC...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGTCACTATTTGGCTTTaGTTTGTTCTCATCATCATT +
Preference number: 4 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTVTIWL*FVLIII
Trigger: AATGATGATGAGAACAAACCAAAGCCAAATAGTGAC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTTCCAAGTCACTATTTaGCTTTGGTTTGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSFQVTI*LWFVLI
Trigger: GATGAGAACAAACCAAAGCCAAATAGTGACTTGGAA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATTCCAAGTCACTATTTaGCTTTGGTTTGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQFQVTI*LWFVLI
Trigger: GATGAGAACAAACCAAAGCCAAATAGTGACTTGGAA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp AAAAGCTCATTACGCCACAAATCTACAATAATCTTGGGAGATTCCCTTTACTCCTTCCAAGTCACTATTTaGCTTTGGTTTGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: KSSLRHKSTIILGDSLYSFQVTI*LWFVLI
Trigger: GATGAGAACAAACCAAAGCCAAATAGTGACTTGGAA...GGAGTAAAGGGAATCTCCCAAGATTATTGTAGATTTGTGGCGTAATGAGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCGTTTCTGAGGTTTCTTaGATCCAAGTTTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSVSEVS*IQVSSL
Trigger: CAATGAAGAAACTTGGATCCAAGAAACCTCAGAAAC...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGGTATAGATTCCAGTaGATGTGTACTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYRYRFQ*MCTLHS
Trigger: AGAATGTAGAGTACACATTCACTGGAATCTATACCT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATATTCACCAAATAAAATaGGCCCAAGAAAATGACCAG +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYIHQIK*AQENDQ
Trigger: CTGGTCATTTTCTTGGGCTCATTTTATTTGGTGAAT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGTCTTCATATACAGGCTaGAGTTTAACATCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLSSYTG*SLTSRE
Trigger: TTCACGAGATGTTAAACTTCAGCCTGTATATGAAGA...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000640652.1
CDS-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATCCAGTGTGTTTCCTTaGAATCTAGAGAGATACCAT +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLSSVFP*NLERYH
Trigger: ATGGTATCTCTCTAGATTTCAAGGAAACACACTGGA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATGGCTTCAGTTTTCTTaGTCCATAATCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQWLQFS*SIISDK
Trigger: TTTATCAGAGATTATGGAGCAAGAAAACTGAAGCCA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000639244.1
CDS-3UTR GCA 90 bp AAAAGCTCATTACGCCACAAATCTACAATAATCTTGGGAGATTCCCTTTACTCCTGGCTTCAGTTTTCTTaGTCCATAATCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: KSSLRHKSTIILGDSLYSWLQFS*SIISDK
Trigger: TTTATCAGAGATTATGGAGCAAGAAAACTGAAGCCA...GGAGTAAAGGGAATCTCCCAAGATTATTGTAGATTTGTGGCGTAATGAGCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGCTTGAGAACCATTTCTaGTGTGAAAATCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLLENHF*CENPSK
Trigger: TTTACTGGGATTTTCACAGCAGAAATGGTTCTCAAG...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATTACAATGTTCACTTTaGACAACTATCCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQLQCSL*TTIPIV
Trigger: GACTATAGGGATAGTTGTGCAAAGTGAACATTGTAA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAAAGCTGCTTTTAATTTaGCTTTGTTCTGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQKLLLI*LCSVVL
Trigger: CAGTACTACAGAACAAAGGCAAATTAAAAGCAGCTT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCAAGCTGCTTTTAATTTaGCTTTGTTCTGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSKLLLI*LCSVVL
Trigger: CAGTACTACAGAACAAAGGCAAATTAAAAGCAGCTT...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAGTGAACTTGATCCTTTaGACACATAAAAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQVNLIL*THKSSQ
Trigger: TTGTGAACTTTTATGTGTGCAAAGGATCAAGTTCAC...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAGTCACTATTTGGCTTTaGTTTGTTCTCATCATCATT +
Preference number: 4 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQVTIWL*FVLIII
Trigger: AATGATGATGAGAACAAACCAAAGCCAAATAGTGAC...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGAAACATACCTACAATaGAGAGAATCACCACCACAA +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLETYLQ*RESPPQ
Trigger: TTGTGGTGGTGATTCTCTCCATTGTAGGTATGTTTC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATATGAATTGGGGACCATaGAAATGCACTAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYMNWGP*KCTRTN
Trigger: ATTTGTTCTAGTGCATTTCCATGGTCCCCAATTCAT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGATGAATTGGGGACCATaGAAATGCACTAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLMNWGP*KCTRTN
Trigger: ATTTGTTCTAGTGCATTTCCATGGTCCCCAATTCAT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAAGGTATAGATTCCAGTaGATGTGTACTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLRYRFQ*MCTLHS
Trigger: AGAATGTAGAGTACACATTCACTGGAATCTATACCT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGTCATAAAGATGTCTTaGCCTCCAAACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLVIKMS*PPNFFF
Trigger: GAAAAAGAAGTTTGGAGGTCAAGACATCTTTATGAC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR TCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAATAAGAGTTTGGTTTTaGCCTCACATAAATCCAAGG +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLIRVWF*PHINPR
Trigger: CCTTGGATTTATGTGAGGTCAAAACCAAACTCTTAT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAAAACTCTGTCACATATaGCATCACAATGACACTGAA +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLKLCHI*HHNDTE
Trigger: TTCAGTGTCATTGTGATGGCATATGTGACAGAGTTT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
CDS-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACTTGAGAACCATTTCTaGTGTGAAAATCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLLENHF*CENPSK
Trigger: TTTACTGGGATTTTCACAGCAGAAATGGTTCTCAAG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACAGTATTATTGGACATaGAGCTGTCTATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLQYYWT*SCLSYC
Trigger: GCAATAAGATAGACAGCTGCATGTCCAATAATACTG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGTTACAATGTTCACTTTaGACAACTATCCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLLQCSL*TTIPIV
Trigger: GACTATAGGGATAGTTGTGCAAAGTGAACATTGTAA...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGAAGCTGCTTTTAATTTaGCTTTGTTCTGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: LLICLCSVVLLGESCTSLKLLLI*LCSVVL
Trigger: CAGTACTACAGAACAAAGGCAAATTAAAAGCAGCTT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATATCTTGTTCCTTTTTaGGCTTCTTGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLYLVPF*ASWLSL
Trigger: AAGAGAAAGCCAAGAAGCCCAAAAAGGAACAAGATA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAATGAATTGGGGACCATaGAAATGCACTAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLMNWGP*KCTRTN
Trigger: ATTTGTTCTAGTGCATTTCCATGGTCCCCAATTCAT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
3UTR CAA 72 bp ATTCCAGTATTATTGGACATGCAGCTGTCTATCTTATaGCCTTCATGGATTTCTATAACTTTTGGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: IPVLLDMQLSIL*PSWISITFGFL
Trigger: TAGAAAGCCAAAAGTTATAGAAATCCATGAAGGCAATAAGATAGACAGCTGCATGTCCAATAATACTGGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638473.1
CDS-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAATCATGTTAGGTAATTaGACAACTTTGCCACTTTGT +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLIMLGN*TTLPLC
Trigger: ACAAAGTGGCAAAGTTGTGCAATTACCTAACATGAT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR GCA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGTGAACTTGATCCTTTaGACACATAAAAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: SFERQGSCILFLQRKPHLVNLIL*THKSSQ
Trigger: TTGTGAACTTTTATGTGTGCAAAGGATCAAGTTCAC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CACGATTCAGCAGAGAGCAGCTGGGCAAGTCTAGCACTTCCTTGCCATGGCAGGAGTTCTTCCATTGTGTaGGTCAGAATGCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: HDSAESSWASLALPCHGRSSSIV*VRMLAM
Trigger: CATAGCCAGCATTCTGACCAACACAATGGAAGAACT...CCTGCCATGGCAAGGAAGTGCTAGACTTGCCCAGCTGCTCTCTGCTGAATCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp CACGATTCAGCAGAGAGCAGCTGGGCAAGTCTAGCACTTCCTTGCCATGGCAGGCTTCAAGTTCTTCCATaGTGTTGGTCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: HDSAESSWASLALPCHGRLQVLP*CWSECW
Trigger: CCAGCATTCTGACCAACACAATGGAAGAACTTGAAG...CCTGCCATGGCAAGGAAGTGCTAGACTTGCCCAGCTGCTCTCTGCTGAATCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGACATCCCTGTCAAACCTaGATGTGGCTTGGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGHPCQT*MWLGFS
Trigger: ACTGAAGCCAAGCCACATCAAGGTTTGACAGGGATG...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGACAAAAGCAGAATCGCTaGGGGGCCACTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGQKQNR*GATANI
Trigger: AATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTTG...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATATGCTCACGGCTCTTaGCCTTCCAGAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTYAHGS*PSRGIL
Trigger: GAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCATA...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp ATGTTGGGATTGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAGAATATGATGTTGGGATaGCCCATCTCGCCTGACCAT +
Preference number: 5 (lower is better)
Translates to: MLGLPISPDHAVMCHTIQNMMLG*PISPDH
Trigger: ATGGTCAGGCGAGATGGGCAATCCCAACATCATATT...CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS TCA 90 bp CTTCTGAAGAACTTTCCAACAGCTCTCCTAACCCACCTATTCCACTaGAATCTCTTGAAGCAGCTGATGCTGCCGCAACTGCCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: LLKNFPTALLTHLFH*NLLKQLMLPQLPEL
Trigger: AAGCTCAGGCAGTTGCGGCAGCATCAGCTGCTTCAAGAGATTTCAGTGGAATAGGTGGGTTAGGAGAGCTGTTGGAAAGTTCTTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000440431.6
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000668657.1
CDS-3UTR CAA 90 bp CACGATTCAGCAGAGAGCAGCTGGGCAAGTCTAGCACTTCCTTGCCATGGCAGGAGTCACTATTTGGCTTaGGTTTGTTCTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: HDSAESSWASLALPCHGRSHYLA*VCSHHH
Trigger: ATGATGATGAGAACAAACCAAAGCCAAATAGTGACT...CCTGCCATGGCAAGGAAGTGCTAGACTTGCCCAGCTGCTCTCTGCTGAATCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCCAAAAGCAGAATCGCTaGGGGGCCACTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: AFKCGHLKQCKIASANIIQKQNR*GATANI
Trigger: AATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTTG...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGCAAAAGCAGAATCGCTaGGGGGCCACTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLQKQNR*GATANI
Trigger: AATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTTG...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGAAGGAAGCTGCTTCTTTaGACGCTGTCTTCAGATTCG +
Preference number: 5 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGRKLLL*TLSSDS
Trigger: CGAATCTGAAGACAGCGTCAAAAGAAGCAGCTTCCT...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp GATATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGTATGCTCACGGCTCTTaGCCTTCCAGAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: DMCCPNAYRLWPFISKPQYAHGS*PSRGIL
Trigger: GAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCATA...CTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp ATGTTGGGATTGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAGTCAGTAGCAGCAAGGTaGTCTGAGCTAAATGAACTC +
Preference number: 5 (lower is better)
Translates to: MLGLPISPDHAVMCHTIQSVAAR*SELNEL
Trigger: GAGTTCATTTAGCTCAGACAACCTTGCTGCTACTGA...CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp CAAAATTTCCCTCCCAGAACCCGCACTCTGGCTGAGATTCCAGTAAGCAATGGATCTTCAGATTCGGATTaGGGAAAGCTGTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QNFPPRTRTLAEIPVSNGSSDSD*GKLSLS
Trigger: AGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAGA...TCCATTGCTTACTGGAATCTCAGCCAGAGTGCGGGTTCTGGGAGGGAAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACACATAGACTATCAGCTTaGCTGAGAGCAGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTHRLSA*LRAEDG
Trigger: GCCATCTTCTGCTCTCAGCAAAGCTGATAGTCTATG...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp ATGTTGGGATTGCCCATCTCGCCTGACCATGCTGTGATGTGTCACACGATTCAGCTTCCAAGTCACTATTaGGCTTTGGTTTGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: MLGLPISPDHAVMCHTIQLPSHY*ALVCSH
Trigger: ATGAGAACAAACCAAAGCCAAATAGTGACTTGGAAG...CTGAATCGTGTGACACATCACAGCATGGTCAGGCGAGATGGGCAATCCCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTCTCTCTCTCCTTTGTaGTTTCCTTCAAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLSLSPL*FPSRCS
Trigger: AGAGCACCTTGAAGGAAACAACAAAGGAGAGAGAGA...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTATGCTCACGGCTCTTaGCCTTCCAGAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHYAHGS*PSRGIL
Trigger: GAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCATA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGACAATCCCTCCACATTaGACAGACCAAGCTCCATTA +
Preference number: 5 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLTIPPH*TDQAPL
Trigger: TAATGGAGCTTGGTCTGTCAAATGTGGAGGGATTGT...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGAATGTCCGTAATGATTaGATGGCACCGAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLNVRND*MAPSSE
Trigger: CTCAGAACTCGGTGCCATCAAATCATTACGGACATT...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCAACCTCTTGTCAATGTaGATACCCTGCTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: AFKCGHLKQCKIASANIINLLSM*IPCFTE
Trigger: CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTT...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAGTGGTGCCGTTACTGTaGCGTCGCTCTCCATGTCTG +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQVVPLL*RRSPCL
Trigger: CAGACATGGAGAGCGACGCAACAGTAACGGCACCAC...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409101.7
CDS TCA 90 bp AGATTCTTTGCTCCTTTCCCAGTAAGCCACTCTACTATGAATCCTTaGCAGGTATCTCATCCCTGTCAAACCTTGATGTGGCTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: RFFAPFPVSHSTMNP*QVSHPCQTLMWLGF
Trigger: GAAGCCAAGCCACATCAAGGTTTGACAGGGATGAGATACCTGTCAAGGATTCATAGTAGAGTGGCTTACTGGGAAAGGAGCAAAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000453007.1
ENST00000638473.1
ENST00000639244.1
ENST00000668657.1
CDS-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGCATCCCTGTCAAACCTaGATGTGGCTTGGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEHPCQT*MWLGFS
Trigger: ACTGAAGCCAAGCCACATCAAGGTTTGACAGGGATG...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CAA 90 bp GATATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGCTCTACTATGAATCCTaGACAGGTATCTCATCCCTG +
Preference number: 5 (lower is better)
Translates to: DMCCPNAYRLWPFISKPQLYYES*TGISSL
Trigger: CAGGGATGAGATACCTGTCAAGGATTCATAGTAGAG...CTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGCAAAAGCAGAATCGCTaGGGGGCCACTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEQKQNR*GATANI
Trigger: AATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTTG...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTGGGGAGCAGAATTTTTaGTCACTGGTCAGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLGEQNF*SLVSLF
Trigger: AAACAGACTGACCAGTGACAAAAAATTCTGCTCCCC...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTATGCTCACGGCTCTTaGCCTTCCAGAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELYAHGS*PSRGIL
Trigger: GAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCATA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTTATGCTCACGGCTCTTaGCCTTCCAGAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSYAHGS*PSRGIL
Trigger: GAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCATA...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGTTTTTCCACCGAGCTaGCTTGCCAAGAGCCTGACA +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTVFPPS*LAKSLT
Trigger: TGTCAGGCTCTTGGCAAGCAAGCTCGGTGGAAAAAC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGGTTTTTCCACCGAGCTaGCTTGCCAAGAGCCTGACA +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELVFPPS*LAKSLT
Trigger: TGTCAGGCTCTTGGCAAGCAAGCTCGGTGGAAAAAC...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTTTCCACCGAGCTaGCTTGCCAAGAGCCTGACA +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWVFPPS*LAKSLT
Trigger: TGTCAGGCTCTTGGCAAGCAAGCTCGGTGGAAAAAC...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGGTTTTTCCACCGAGCTaGCTTGCCAAGAGCCTGACA +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQVFPPS*LAKSLT
Trigger: TGTCAGGCTCTTGGCAAGCAAGCTCGGTGGAAAAAC...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTTTTAAATGTGGCCACTaGAAGCAGTGCAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLFKCGH*KQCKIA
Trigger: GGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAA...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp CTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGCCTTTGTCTGATCATTaGAGAGACAGGGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: LRVQFQLVHLLGVEQHQLPLSDH*RDRVLV
Trigger: TACAAGAACCCTGTCTCTCAAATGATCAGACAAAGG...CAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCCCTTTGTCTGATCATTaGAGAGACAGGGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: AFKCGHLKQCKIASANIIPLSDH*RDRVLV
Trigger: TACAAGAACCCTGTCTCTCAAATGATCAGACAAAGG...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCTCTGGCAAAACACCTTaGTCTGATCATTTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: AFKCGHLKQCKIASANIISGKTP*SDHLRD
Trigger: GTCTCTCAAATGATCAGACAAAGGTGTTTTGCCAGA...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCATCCCTGTCAAACCTaGATGTGGCTTGGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNHPCQT*MWLGFS
Trigger: ACTGAAGCCAAGCCACATCAAGGTTTGACAGGGATG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAAAAGCAGAATCGCTaGGGGGCCACTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELQKQNR*GATANI
Trigger: AATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTTG...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACAAAAGCAGAATCGCTaGGGGGCCACTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLQKQNR*GATANI
Trigger: AATGTTTGCAGTGGCCCCCAAGCGATTCTGCTTTTG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp ATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATCACCCTATTCTTTCCTCCAGCATCTCCATaGAAATCTGGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: MHTDYGPSSPNLRITLFFPPASP*KSGKSL
Trigger: TAAGCTCTTACCAGATTTCAATGGAGATGCTGGAGG...AAAGAATAGGGTGATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTATGCTCACGGCTCTTaGCCTTCCAGAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSYAHGS*PSRGIL
Trigger: GAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCATA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATATGCTCACGGCTCTTaGCCTTCCAGAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQYAHGS*PSRGIL
Trigger: GAGGATTCCTCTGGAAGGCAAAGAGCCGTGAGCATA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAGTTTTTCCACCGAGCTaGCTTGCCAAGAGCCTGACA +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQVFPPS*LAKSLT
Trigger: TGTCAGGCTCTTGGCAAGCAAGCTCGGTGGAAAAAC...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTTCCTTGGAATTTGTTaGCTGGGCGAGGTATGGGTT +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHFLGIC*LGEVWV
Trigger: AACCCATACCTCGCCCAGCAAACAAATTCCAAGGAA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTAAAAACAGCAACCTCTaGTCAATGTTGATACCCTGC +
Preference number: 5 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLKNSNL*SMLIPC
Trigger: GCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTT...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AAAAGCTCATTACGCCACAAATCTACAATAATCTTGGGAGATTCCCTTTACTCCAAGTCTAGCACTTCCTaGCCATGGCAGGGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: KSSLRHKSTIILGDSLYSKSSTS*PWQGKE
Trigger: TTCCTTCCCCTGCCATGGCAAGGAAGTGCTAGACTT...GGAGTAAAGGGAATCTCCCAAGATTATTGTAGATTTGTGGCGTAATGAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATTTTCACAAAGAGCATTaGGAAGACACTGGCCATGTA +
Preference number: 5 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDFHKEH*EDTGHV
Trigger: TACATGGCCAGTGTCTTCCAAATGCTCTTTGTGAAA...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS CCA 90 bp ACAGAGCCTTATGAATTACAGCATAACAAAGCCCAGCATCCAAGATaGTTAGGGTATAACGTGTCTTCCTCTGCAGCTGTTCAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: TEPYELQHNKAQHPR*LGYNVSSSAAVQLF
Trigger: AAAAAGCTGAACAGCTGCAGAGGAAGACACGTTATACCCTAACCATCTTGGATGCTGGGCTTTGTTATGCTGTAATTCATAAGGCTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283254.12
ENST00000453007.1
CDS CCA 90 bp GAATCCTTGACAGGTATCTCATCCCTGTCAAACCTTGATGTGGCTTaGCTTCAGTTTTCTTGCTCCATAATCTCTGATAAAACAGAGCCT +
Preference number: 5 (lower is better)
Translates to: ESLTGISSLSNLDVA*LQFSCSIISDKTEP
Trigger: AGGCTCTGTTTTATCAGAGATTATGGAGCAAGAAAACTGAAGCCAAGCCACATCAAGGTTTGACAGGGATGAGATACCTGTCAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000453007.1
ENST00000639244.1
ENST00000668657.1
CDS-3UTR CAA 90 bp GCCTTTAAATGTGGCCACTTGAAGCAGTGCAAGATAGCCAGCGCCAACATTATCATTACGTGTAGCTTCTaGCATACGAATTACCTTAGA +
Preference number: 5 (lower is better)
Translates to: AFKCGHLKQCKIASANIIITCSF*HTNYLR
Trigger: TCTAAGGTAATTCGTATGCAAGAAGCTACACGTAAT...GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTCTTCCAAGTCACTATTaGGCTTTGGTTTGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLLPSHY*ALVCSH
Trigger: ATGAGAACAAACCAAAGCCAAATAGTGACTTGGAAG...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAAGGAAGCTGCTTCTTTaGACGCTGTCTTCAGATTCG +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLRKLLL*TLSSDS
Trigger: CGAATCTGAAGACAGCGTCAAAAGAAGCAGCTTCCT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGAGGAAGCTGCTTCTTTaGACGCTGTCTTCAGATTCG +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQRKLLL*TLSSDS
Trigger: CGAATCTGAAGACAGCGTCAAAAGAAGCAGCTTCCT...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGAGGAAGCTGCTTCTTTaGACGCTGTCTTCAGATTCG +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWRKLLL*TLSSDS
Trigger: CGAATCTGAAGACAGCGTCAAAAGAAGCAGCTTCCT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATCCTCCAGCATCTCCATaGAAATCTGGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHPPASP*KSGKSL
Trigger: TAAGCTCTTACCAGATTTCAATGGAGATGCTGGAGG...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATAGTTCTTCCATTGTGTaGGTCAGAATGCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHSSSIV*VRMLAM
Trigger: CATAGCCAGCATTCTGACCAACACAATGGAAGAACT...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGCTTCAAGTTCTTCCATaGTGTTGGTCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTELQVLP*CWSECW
Trigger: CCAGCATTCTGACCAACACAATGGAAGAACTTGAAG...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATCTTCAAGTTCTTCCATaGTGTTGGTCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHLQVLP*CWSECW
Trigger: CCAGCATTCTGACCAACACAATGGAAGAACTTGAAG...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGACAATCCCTCCACATTaGACAGACCAAGCTCCATTA +
Preference number: 5 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTETIPPH*TDQAPL
Trigger: TAATGGAGCTTGGTCTGTCAAATGTGGAGGGATTGT...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTCAGTAGCAGCAAGGTaGTCTGAGCTAAATGAACTC +
Preference number: 5 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTESVAAR*SELNEL
Trigger: GAGTTCATTTAGCTCAGACAACCTTGCTGCTACTGA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTTCAATTCCAGTATTATaGGACATGCAGCTGTCTATC +
Preference number: 5 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLSIPVL*DMQLSI
Trigger: GATAGACAGCTGCATGTCCAATAATACTGGAATTGA...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATTCAATTCCAGTATTATaGGACATGCAGCTGTCTATC +
Preference number: 5 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDSIPVL*DMQLSI
Trigger: GATAGACAGCTGCATGTCCAATAATACTGGAATTGA...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTTTAAATGTGGCCACTaGAAGCAGTGCAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHFKCGH*KQCKIA
Trigger: GGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGTTCCTTGGAATTTGTTaGCTGGGCGAGGTATGGGTT +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWFLGIC*LGEVWV
Trigger: AACCCATACCTCGCCCAGCAAACAAATTCCAAGGAA...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTATTCCTTGGAATTTGTTaGCTGGGCGAGGTATGGGTT +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLFLGIC*LGEVWV
Trigger: AACCCATACCTCGCCCAGCAAACAAATTCCAAGGAA...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTTCCTTGGAATTTGTTaGCTGGGCGAGGTATGGGTT +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQFLGIC*LGEVWV
Trigger: AACCCATACCTCGCCCAGCAAACAAATTCCAAGGAA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCACTAGGGTCATGTATTaGCCCTGGTCATCCGTTTCC +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSTRVMY*PWSSVS
Trigger: GGAAACGGATGACCAGGGCAAATACATGACCCTAGT...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAACTAGGGTCATGTATTaGCCCTGGTCATCCGTTTCC +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQTRVMY*PWSSVS
Trigger: GGAAACGGATGACCAGGGCAAATACATGACCCTAGT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AGGTCTTCTTCGGGTTCAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACAGTTACAATGTTCACTTaGCACAACTATCCCTATAGT +
Preference number: 5 (lower is better)
Translates to: RSSSGSVSACSPSRGRTTVTMFT*HNYPYS
Trigger: ACTATAGGGATAGTTGTGCAAAGTGAACATTGTAAC...TGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAAGAAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638473.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACACATAGACTATCAGCTTaGCTGAGAGCAGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTHRLSA*LRAEDG
Trigger: GCCATCTTCTGCTCTCAGCAAAGCTGATAGTCTATG...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCATAGACTATCAGCTTaGCTGAGAGCAGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELHRLSA*LRAEDG
Trigger: GCCATCTTCTGCTCTCAGCAAAGCTGATAGTCTATG...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGCAGGATACATCCCTGTaGGAAGCTTGCAAAAGACAC +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWQDTSL*EACKRH
Trigger: GTGTCTTTTGCAAGCTTCCAACAGGGATGTATCCTG...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGGATACATCCCTGTaGGAAGCTTGCAAAAGACAC +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELQDTSL*EACKRH
Trigger: GTGTCTTTTGCAAGCTTCCAACAGGGATGTATCCTG...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATCATCCCTGTCAAACCTaGATGTGGCTTGGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYHPCQT*MWLGFS
Trigger: ACTGAAGCCAAGCCACATCAAGGTTTGACAGGGATG...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGCTCTACTATGAATCCTaGACAGGTATCTCATCCCTG +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWLYYES*TGISSL
Trigger: CAGGGATGAGATACCTGTCAAGGATTCATAGTAGAG...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACTCTACTATGAATCCTaGACAGGTATCTCATCCCTG +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLLYYES*TGISSL
Trigger: CAGGGATGAGATACCTGTCAAGGATTCATAGTAGAG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CAA 90 bp GATATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGATTACGTGTAGCTTCTaGCATACGAATTACCTTAGA +
Preference number: 5 (lower is better)
Translates to: DMCCPNAYRLWPFISKPQITCSF*HTNYLR
Trigger: TCTAAGGTAATTCGTATGCAAGAAGCTACACGTAAT...CTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp CAGTTTCAGCTTGTTCACCTTCTCGGGGTAGAACAACATCAACTGTGCTTCCTTAGTCACTATTTGGCTTaGGTTTGTTCTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: QFQLVHLLGVEQHQLCFLSHYLA*VCSHHH
Trigger: ATGATGATGAGAACAAACCAAAGCCAAATAGTGACT...AAGGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638473.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTCTCTCTCTCCTTTGTaGTTTCCTTCAAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNSLSPL*FPSRCS
Trigger: AGAGCACCTTGAAGGAAACAACAAAGGAGAGAGAGA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTCTCTCTCTCCTTTGTaGTTTCCTTCAAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQSLSPL*FPSRCS
Trigger: AGAGCACCTTGAAGGAAACAACAAAGGAGAGAGAGA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTATCTCTCTCTCCTTTGTaGTTTCCTTCAAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLSLSPL*FPSRCS
Trigger: AGAGCACCTTGAAGGAAACAACAAAGGAGAGAGAGA...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp AACCCCAAACTAATTAGATATTCCTTGTCACCAGAAGCCTTGAAAACTGCCCAATCTCTCTCTCCTTTGTaGTTTCCTTCAAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: NPKLIRYSLSPEALKTAQSLSPL*FPSRCS
Trigger: AGAGCACCTTGAAGGAAACAACAAAGGAGAGAGAGA...TTGGGCAGTTTTCAAGGCTTCTGGTGACAAGGAATATCTAATTAGTTTGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACATCTTCAGATTCGGATTaGGGAAAGCTGTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTSSDSD*GKLSLS
Trigger: AGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAGA...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTTCTTCAGATTCGGATTaGGGAAAGCTGTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSSSDSD*GKLSLS
Trigger: AGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAGA...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTATCTTCAGATTCGGATTaGGGAAAGCTGTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLSSDSD*GKLSLS
Trigger: AGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAGA...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCAGGAAGCTGCTTCTTTaGACGCTGTCTTCAGATTCG +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSRKLLL*TLSSDS
Trigger: CGAATCTGAAGACAGCGTCAAAAGAAGCAGCTTCCT...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGGGGAGCAGAATTTTTaGTCACTGGTCAGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTGEQNF*SLVSLF
Trigger: AAACAGACTGACCAGTGACAAAAAATTCTGCTCCCC...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCCTCCAGCATCTCCATaGAAATCTGGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNPPASP*KSGKSL
Trigger: TAAGCTCTTACCAGATTTCAATGGAGATGCTGGAGG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGCCTCCAGCATCTCCATaGAAATCTGGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQPPASP*KSGKSL
Trigger: TAAGCTCTTACCAGATTTCAATGGAGATGCTGGAGG...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACACCTCCAGCATCTCCATaGAAATCTGGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTPPASP*KSGKSL
Trigger: TAAGCTCTTACCAGATTTCAATGGAGATGCTGGAGG...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGCCTCCAGCATCTCCATaGAAATCTGGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWPPASP*KSGKSL
Trigger: TAAGCTCTTACCAGATTTCAATGGAGATGCTGGAGG...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAGTTCTTCCATTGTGTaGGTCAGAATGCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTSSSIV*VRMLAM
Trigger: CATAGCCAGCATTCTGACCAACACAATGGAAGAACT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAGTTCTTCCATTGTGTaGGTCAGAATGCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNSSSIV*VRMLAM
Trigger: CATAGCCAGCATTCTGACCAACACAATGGAAGAACT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAAGTTCTTCCATTGTGTaGGTCAGAATGCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLSSSIV*VRMLAM
Trigger: CATAGCCAGCATTCTGACCAACACAATGGAAGAACT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACTTCAAGTTCTTCCATaGTGTTGGTCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLLQVLP*CWSECW
Trigger: CCAGCATTCTGACCAACACAATGGAAGAACTTGAAG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGACAATCCCTCCACATTaGACAGACCAAGCTCCATTA +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQTIPPH*TDQAPL
Trigger: TAATGGAGCTTGGTCTGTCAAATGTGGAGGGATTGT...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAACAATCCCTCCACATTaGACAGACCAAGCTCCATTA +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLTIPPH*TDQAPL
Trigger: TAATGGAGCTTGGTCTGTCAAATGTGGAGGGATTGT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AACCCCAAACTAATTAGATATTCCTTGTCACCAGAAGCCTTGAAAACTGCCCAAACAATCCCTCCACATTaGACAGACCAAGCTCCATTA +
Preference number: 5 (lower is better)
Translates to: NPKLIRYSLSPEALKTAQTIPPH*TDQAPL
Trigger: TAATGGAGCTTGGTCTGTCAAATGTGGAGGGATTGT...TTGGGCAGTTTTCAAGGCTTCTGGTGACAAGGAATATCTAATTAGTTTGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAATGTCCGTAATGATTaGATGGCACCGAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTNVRND*MAPSSE
Trigger: CTCAGAACTCGGTGCCATCAAATCATTACGGACATT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGAATGTCCGTAATGATTaGATGGCACCGAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELNVRND*MAPSSE
Trigger: CTCAGAACTCGGTGCCATCAAATCATTACGGACATT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAGTTTTTCCACCGAGCTaGCTTGCCAAGAGCCTGACA +
Preference number: 5 (lower is better)
Translates to: SFERQGSCILFLQRKPHLVFPPS*LAKSLT
Trigger: TGTCAGGCTCTTGGCAAGCAAGCTCGGTGGAAAAAC...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTATTTAAATGTGGCCACTaGAAGCAGTGCAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLFKCGH*KQCKIA
Trigger: GGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAA...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGACAATGAACACTAGGTaGATCCGGGACAAAACTAGG +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWTMNTR*IRDKTR
Trigger: CCTAGTTTTGTCCCGGATCAACCTAGTGTTCATTGT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGACAATGAACACTAGGTaGATCCGGGACAAAACTAGG +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELTMNTR*IRDKTR
Trigger: CCTAGTTTTGTCCCGGATCAACCTAGTGTTCATTGT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAACAATGAACACTAGGTaGATCCGGGACAAAACTAGG +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLTMNTR*IRDKTR
Trigger: CCTAGTTTTGTCCCGGATCAACCTAGTGTTCATTGT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGACAATGAACACTAGGTaGATCCGGGACAAAACTAGG +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQTMNTR*IRDKTR
Trigger: CCTAGTTTTGTCCCGGATCAACCTAGTGTTCATTGT...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGAACCTCTTGTCAATGTaGATACCCTGCTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELNLLSM*IPCFTE
Trigger: CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAACCTCTTGTCAATGTaGATACCCTGCTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTNLLSM*IPCFTE
Trigger: CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTAACCTCTTGTCAATGTaGATACCCTGCTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSNLLSM*IPCFTE
Trigger: CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTT...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATAAAAACAGCAACCTCTaGTCAATGTTGATACCCTGC +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHKNSNL*SMLIPC
Trigger: GCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTT...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACATCCCTGTTGGAAGCTaGCAAAAGACACATACACTG +
Preference number: 5 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNIPVGS*QKTHTL
Trigger: CAGTGTATGTGTCTTTTGCAAGCTTCCAACAGGGAT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGATCCCTGTTGGAAGCTaGCAAAAGACACATACACTG +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELIPVGS*QKTHTL
Trigger: CAGTGTATGTGTCTTTTGCAAGCTTCCAACAGGGAT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAATCCCTGTTGGAAGCTaGCAAAAGACACATACACTG +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLIPVGS*QKTHTL
Trigger: CAGTGTATGTGTCTTTTGCAAGCTTCCAACAGGGAT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTATCCCTGTTGGAAGCTaGCAAAAGACACATACACTG +
Preference number: 5 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSIPVGS*QKTHTL
Trigger: CAGTGTATGTGTCTTTTGCAAGCTTCCAACAGGGAT...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAGGATACATCCCTGTaGGAAGCTTGCAAAAGACAC +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQQDTSL*EACKRH
Trigger: GTGTCTTTTGCAAGCTTCCAACAGGGATGTATCCTG...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGGGTAATTGCACAACTTaGCCACTTTGTTCATGGCTA +
Preference number: 5 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEGNCTT*PLCSWL
Trigger: TAGCCATGAACAAAGTGGCAAAGTTGTGCAATTACC...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp ATGTGTTGCCCAAATGCATACAGACTATGGCCCTTCATCTCCAAACCTCAGGATAAATCTACAATAATCTaGGGAGATTCCCTTTACTCC +
Preference number: 5 (lower is better)
Translates to: MCCPNAYRLWPFISKPQDKSTII*GDSLYS
Trigger: GGAGTAAAGGGAATCTCCCAAGATTATTGTAGATTT...ATCCTGAGGTTTGGAGATGAAGGGCCATAGTCTGTATGCATTTGGGCAACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACATCCCTGTCAAACCTaGATGTGGCTTGGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: SFERQGSCILFLQRKPHLHPCQT*MWLGFS
Trigger: ACTGAAGCCAAGCCACATCAAGGTTTGACAGGGATG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTCTACTATGAATCCTaGACAGGTATCTCATCCCTG +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQLYYES*TGISSL
Trigger: CAGGGATGAGATACCTGTCAAGGATTCATAGTAGAG...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATCTTCCAAGTCACTATTaGGCTTTGGTTTGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHLPSHY*ALVCSH
Trigger: ATGAGAACAAACCAAAGCCAAATAGTGACTTGGAAG...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTCTCTCTCTCCTTTGTaGTTTCCTTCAAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSSLSPL*FPSRCS
Trigger: AGAGCACCTTGAAGGAAACAACAAAGGAGAGAGAGA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTCTTCAGATTCGGATTaGGGAAAGCTGTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSSSDSD*GKLSLS
Trigger: AGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAGA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAGGGGAGCAGAATTTTTaGTCACTGGTCAGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQGEQNF*SLVSLF
Trigger: AAACAGACTGACCAGTGACAAAAAATTCTGCTCCCC...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CTTTTCCCAACCTACATGAAAATCCAAGATATGTGTTGCCCAAATGCATACAGAGGGGAGCAGAATTTTTaGTCACTGGTCAGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: LFPTYMKIQDMCCPNAYRGEQNF*SLVSLF
Trigger: AAACAGACTGACCAGTGACAAAAAATTCTGCTCCCC...TCTGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTTGGGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTTCAAGTTCTTCCATaGTGTTGGTCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQLQVLP*CWSECW
Trigger: CCAGCATTCTGACCAACACAATGGAAGAACTTGAAG...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAACAATCCCTCCACATTaGACAGACCAAGCTCCATTA +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQTIPPH*TDQAPL
Trigger: TAATGGAGCTTGGTCTGTCAAATGTGGAGGGATTGT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTCAGTAGCAGCAAGGTaGTCTGAGCTAAATGAACTC +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSSVAAR*SELNEL
Trigger: GAGTTCATTTAGCTCAGACAACCTTGCTGCTACTGA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATCAGTAGCAGCAAGGTaGTCTGAGCTAAATGAACTC +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQSVAAR*SELNEL
Trigger: GAGTTCATTTAGCTCAGACAACCTTGCTGCTACTGA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTCAATTCCAGTATTATaGGACATGCAGCTGTCTATC +
Preference number: 5 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTESIPVL*DMQLSI
Trigger: GATAGACAGCTGCATGTCCAATAATACTGGAATTGA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATTTAAATGTGGCCACTaGAAGCAGTGCAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQFKCGH*KQCKIA
Trigger: GGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTTTAAATGTGGCCACTaGAAGCAGTGCAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSFKCGH*KQCKIA
Trigger: GGCTATCTTGCACTGCTTCAAGTGGCCACATTTAAA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAAAAAACAGCAACCTCTaGTCAATGTTGATACCCTGC +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLKNSNL*SMLIPC
Trigger: GCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAAAAACAGCAACCTCTaGTCAATGTTGATACCCTGC +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTKNSNL*SMLIPC
Trigger: GCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTAAAAACAGCAACCTCTaGTCAATGTTGATACCCTGC +
Preference number: 5 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSKNSNL*SMLIPC
Trigger: GCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTT...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGCCTTTGTCTGATCATTaGAGAGACAGGGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQPLSDH*RDRVLV
Trigger: TACAAGAACCCTGTCTCTCAAATGATCAGACAAAGG...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTCTGGCAAAACACCTTaGTCTGATCATTTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNSGKTP*SDHLRD
Trigger: GTCTCTCAAATGATCAGACAAAGGTGTTTTGCCAGA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGTCTGGCAAAACACCTTaGTCTGATCATTTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWSGKTP*SDHLRD
Trigger: GTCTCTCAAATGATCAGACAAAGGTGTTTTGCCAGA...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTCTGGCAAAACACCTTaGTCTGATCATTTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQSGKTP*SDHLRD
Trigger: GTCTCTCAAATGATCAGACAAAGGTGTTTTGCCAGA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATAATGGACAGAGCAGGTaGAATTCATTCTATCACCAA +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHNGQSR*NSFYHQ
Trigger: TTGGTGATAGAATGAATTCAACCTGCTCTGTCCATT...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATATCCAGTGTGTTTCCTaGAAATCTAGAGAGATACCA +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHIQCVS*KSREIP
Trigger: TGGTATCTCTCTAGATTTCAAGGAAACACACTGGAT...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGGTAATTGCACAACTTaGCCACTTTGTTCATGGCTA +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWGNCTT*PLCSWL
Trigger: TAGCCATGAACAAAGTGGCAAAGTTGTGCAATTACC...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTCTTCCAAGTCACTATTaGGCTTTGGTTTGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSLPSHY*ALVCSH
Trigger: ATGAGAACAAACCAAAGCCAAATAGTGACTTGGAAG...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATGGGGAGCAGAATTTTTaGTCACTGGTCAGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYGEQNF*SLVSLF
Trigger: AAACAGACTGACCAGTGACAAAAAATTCTGCTCCCC...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTTCTTCCATTGTGTaGGTCAGAATGCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSSSIV*VRMLAM
Trigger: CATAGCCAGCATTCTGACCAACACAATGGAAGAACT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATCTTCAAGTTCTTCCATaGTGTTGGTCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYLQVLP*CWSECW
Trigger: CCAGCATTCTGACCAACACAATGGAAGAACTTGAAG...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTCAGTAGCAGCAAGGTaGTCTGAGCTAAATGAACTC +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSVAAR*SELNEL
Trigger: GAGTTCATTTAGCTCAGACAACCTTGCTGCTACTGA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGTCAATTCCAGTATTATaGGACATGCAGCTGTCTATC +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQSIPVL*DMQLSI
Trigger: GATAGACAGCTGCATGTCCAATAATACTGGAATTGA...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTCAATTCCAGTATTATaGGACATGCAGCTGTCTATC +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELSIPVL*DMQLSI
Trigger: GATAGACAGCTGCATGTCCAATAATACTGGAATTGA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTATCAATTCCAGTATTATaGGACATGCAGCTGTCTATC +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLSIPVL*DMQLSI
Trigger: GATAGACAGCTGCATGTCCAATAATACTGGAATTGA...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTATTCTAGCATGGTTTaGATAGTCTTTCGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: AGNKNSNLLSMLIPCFTEYSSMV*IVFRCS
Trigger: TGAACAGCGAAAGACTATCAAAACCATGCTAGAATA...CTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTTTGGCATGGACCTCCTCTTGAAGTCCAGTTGACACATATACTTTACCTTCATTATTCTAGCATGGTTTaGATAGTCTTTCGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: VWHGPPLEVQLTHILYLHYSSMV*IVFRCS
Trigger: TGAACAGCGAAAGACTATCAAAACCATGCTAGAATA...ATGAAGGTAAAGTATATGTGTCAACTGGACTTCAAGAGGAGGTCCATGCCAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAATGTCCGTAATGATTaGATGGCACCGAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYNVRND*MAPSSE
Trigger: CTCAGAACTCGGTGCCATCAAATCATTACGGACATT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGACAATGAACACTAGGTaGATCCGGGACAAAACTAGG +
Preference number: 5 (lower is better)
Translates to: LLICLCSVVLLGESCTSLTMNTR*IRDKTR
Trigger: CCTAGTTTTGTCCCGGATCAACCTAGTGTTCATTGT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATACAATGAACACTAGGTaGATCCGGGACAAAACTAGG +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYTMNTR*IRDKTR
Trigger: CCTAGTTTTGTCCCGGATCAACCTAGTGTTCATTGT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCTTTGTCTGATCATTaGAGAGACAGGGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQPLSDH*RDRVLV
Trigger: TACAAGAACCCTGTCTCTCAAATGATCAGACAAAGG...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAAGGCTATATATATATTaGCCCAAACATGCACCACAG +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLRLYIY*PKHAPQ
Trigger: CTGTGGTGCATGTTTGGGCAAATATATATATAGCCT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGAGGCTATATATATATTaGCCCAAACATGCACCACAG +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQRLYIY*PKHAPQ
Trigger: CTGTGGTGCATGTTTGGGCAAATATATATATAGCCT...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAGGCTATATATATATTaGCCCAAACATGCACCACAG +
Preference number: 5 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNRLYIY*PKHAPQ
Trigger: CTGTGGTGCATGTTTGGGCAAATATATATATAGCCT...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGAGGCTATATATATATTaGCCCAAACATGCACCACAG +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELRLYIY*PKHAPQ
Trigger: CTGTGGTGCATGTTTGGGCAAATATATATATAGCCT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAAATGGACAGAGCAGGTaGAATTCATTCTATCACCAA +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTNGQSR*NSFYHQ
Trigger: TTGGTGATAGAATGAATTCAACCTGCTCTGTCCATT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGAATGGACAGAGCAGGTaGAATTCATTCTATCACCAA +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWNGQSR*NSFYHQ
Trigger: TTGGTGATAGAATGAATTCAACCTGCTCTGTCCATT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAATCCAGTGTGTTTCCTaGAAATCTAGAGAGATACCA +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLIQCVS*KSREIP
Trigger: TGGTATCTCTCTAGATTTCAAGGAAACACACTGGAT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAATCCAGTGTGTTTCCTaGAAATCTAGAGAGATACCA +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTIQCVS*KSREIP
Trigger: TGGTATCTCTCTAGATTTCAAGGAAACACACTGGAT...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCGGTAATTGCACAACTTaGCCACTTTGTTCATGGCTA +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSGNCTT*PLCSWL
Trigger: TAGCCATGAACAAAGTGGCAAAGTTGTGCAATTACC...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CTTTTCCCAACCTACATGAAAATCCAAGATATGTGTTGCCCAAATGCATACAGAGAATTAAATATGATGTaGGGATTGCCCATCTCGCCT +
Preference number: 5 (lower is better)
Translates to: LFPTYMKIQDMCCPNAYRELNMM*GLPISP
Trigger: AGGCGAGATGGGCAATCCCAACATCATATTTAATTC...TCTGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTTGGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAATTACGTGTAGCTTCTaGCATACGAATTACCTTAGA +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLITCSF*HTNYLR
Trigger: TCTAAGGTAATTCGTATGCAAGAAGCTACACGTAAT...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGATTACGTGTAGCTTCTaGCATACGAATTACCTTAGA +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELITCSF*HTNYLR
Trigger: TCTAAGGTAATTCGTATGCAAGAAGCTACACGTAAT...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGAGTCACTATTTGGCTTaGGTTTGTTCTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWSHYLA*VCSHHH
Trigger: ATGATGATGAGAACAAACCAAAGCCAAATAGTGACT...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTTCCAAGTCACTATTaGGCTTTGGTTTGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQLPSHY*ALVCSH
Trigger: ATGAGAACAAACCAAAGCCAAATAGTGACTTGGAAG...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACTTCAAGTTCTTCCATaGTGTTGGTCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: SFERQGSCILFLQRKPHLLQVLP*CWSECW
Trigger: CCAGCATTCTGACCAACACAATGGAAGAACTTGAAG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTATCAGTAGCAGCAAGGTaGTCTGAGCTAAATGAACTC +
Preference number: 5 (lower is better)
Translates to: SFERQGSCILFLQRKPHLSVAAR*SELNEL
Trigger: GAGTTCATTTAGCTCAGACAACCTTGCTGCTACTGA...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACCAGCTGTCTATCTTATaGCCTTCATGGATTTCTATA +
Preference number: 5 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNQLSIL*PSWISI
Trigger: TATAGAAATCCATGAAGGCAATAAGATAGACAGCTG...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATCAATTCCAGTATTATaGGACATGCAGCTGTCTATC +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQSIPVL*DMQLSI
Trigger: GATAGACAGCTGCATGTCCAATAATACTGGAATTGA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGTATTCTAGCATGGTTTaGATAGTCTTTCGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELYSSMV*IVFRCS
Trigger: TGAACAGCGAAAGACTATCAAAACCATGCTAGAATA...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATTCTAGCATGGTTTaGATAGTCTTTCGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: ARTVLKVFGVVTMFTLHNYSSMV*IVFRCS
Trigger: TGAACAGCGAAAGACTATCAAAACCATGCTAGAATA...GTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTAAATGTCCGTAATGATTaGATGGCACCGAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SFERQGSCILFLQRKPHLNVRND*MAPSSE
Trigger: CTCAGAACTCGGTGCCATCAAATCATTACGGACATT...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGGTTACAATGTTCACTTaGCACAACTATCCCTATAGT +
Preference number: 5 (lower is better)
Translates to: GNKNSNLLSMLIPCFTELVTMFT*HNYPYS
Trigger: ACTATAGGGATAGTTGTGCAAAGTGAACATTGTAAC...CAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTAGTTACAATGTTCACTTaGCACAACTATCCCTATAGT +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLVTMFT*HNYPYS
Trigger: ACTATAGGGATAGTTGTGCAAAGTGAACATTGTAAC...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp ACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGGTTTCTGTTACAATGTTCACTTaGCACAACTATCCCTATAGT +
Preference number: 5 (lower is better)
Translates to: TMFTLHNYPYSLGSHWVSVTMFT*HNYPYS
Trigger: ACTATAGGGATAGTTGTGCAAAGTGAACATTGTAAC...AGAAACCCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGCCTTTGTCTGATCATTaGAGAGACAGGGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: LLICLCSVVLLGESCTSLPLSDH*RDRVLV
Trigger: TACAAGAACCCTGTCTCTCAAATGATCAGACAAAGG...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTCTGGCAAAACACCTTaGTCTGATCATTTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSGKTP*SDHLRD
Trigger: GTCTCTCAAATGATCAGACAAAGGTGTTTTGCCAGA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACAGAGTTGCAGCTTGTGAAGAATGGATaGAGTAAAATAGAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: NKNSNLLSMLIPCFTELQLVKNG*SKIEQH
Trigger: ATGCTGCTCTATTTTACTCAATCCATTCTTCACAAG...CTGCAACTCTGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACAGAGAGGTCACTTCACTGTCTTGTATAGGCACTGACTATGAGTATTTGTTACTTGTGAAGAATGGATaGAGTAAAATAGAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: DREVTSLSCIGTDYEYLLLVKNG*SKIEQH
Trigger: ATGCTGCTCTATTTTACTCAATCCATTCTTCACAAG...TAACAAATACTCATAGTCAGTGCCTATACAAGACAGTGAAGTGACCTCTCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACACTTGTGAAGAATGGATaGAGTAAAATAGAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTLVKNG*SKIEQH
Trigger: ATGCTGCTCTATTTTACTCAATCCATTCTTCACAAG...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCTAGGTAGCCATTGGCTTGTGAAGAATGGATaGAGTAAAATAGAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: VVTMFTLHNYPYSLGSHWLVKNG*SKIEQH
Trigger: ATGCTGCTCTATTTTACTCAATCCATTCTTCACAAG...CCAATGGCTACCTAGACTATAGGGATAGTTGTGCAAAGTGAACATTGTAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAAAATGGACAGAGCAGGTaGAATTCATTCTATCACCAA +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQNGQSR*NSFYHQ
Trigger: TTGGTGATAGAATGAATTCAACCTGCTCTGTCCATT...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp TCAGCTGGTAATAAAAACAGCAACCTCTTGTCAATGTTGATACCCTGCTTCACATCTAGGTTTGAGTGTTaGACCAATGTATCTCCTATT +
Preference number: 5 (lower is better)
Translates to: SAGNKNSNLLSMLIPCFTSRFEC*TNVSPI
Trigger: AATAGGAGATACATTGGTCAAACACTCAAACCTAGA...TGTGAAGCAGGGTATCAACATTGACAAGAGGTTGCTGTTTTTATTACCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CTTTTCCCAACCTACATGAAAATCCAAGATATGTGTTGCCCAAATGCATACAGATTCCAAGTCTCTTTTTaGCCTGGTCAGTTTTGGATA +
Preference number: 5 (lower is better)
Translates to: LFPTYMKIQDMCCPNAYRFQVSF*PGQFWI
Trigger: TATCCAAAACTGACCAGGCAAAAAAGAGACTTGGAA...TCTGTATGCATTTGGGCAACACATATCTTGGATTTTCATGTAGGTTGGGAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp AAAAGCTCATTACGCCACAAATCTACAATAATCTTGGGAGATTCCCTTTACTCCTTGTCACCAGAAGCCTaGAAAACTGCCCAATATTTA +
Preference number: 5 (lower is better)
Translates to: KSSLRHKSTIILGDSLYSLSPEA*KTAQYL
Trigger: TAAATATTGGGCAGTTTTCAAGGCTTCTGGTGACAA...GGAGTAAAGGGAATCTCCCAAGATTATTGTAGATTTGTGGCGTAATGAGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGCTTCCAAGTCACTATTaGGCTTTGGTTTGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: LLICLCSVVLLGESCTSLLPSHY*ALVCSH
Trigger: ATGAGAACAAACCAAAGCCAAATAGTGACTTGGAAG...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACAGCTGTCTATCTTATaGCCTTCATGGATTTCTATA +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQQLSIL*PSWISI
Trigger: TATAGAAATCCATGAAGGCAATAAGATAGACAGCTG...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCAGCTGTCTATCTTATaGCCTTCATGGATTTCTATA +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSQLSIL*PSWISI
Trigger: TATAGAAATCCATGAAGGCAATAAGATAGACAGCTG...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp AAAAGCTCATTACGCCACAAATCTACAATAATCTTGGGAGATTCCCTTTACTCCCAGCTGTCTATCTTATaGCCTTCATGGATTTCTATA +
Preference number: 5 (lower is better)
Translates to: KSSLRHKSTIILGDSLYSQLSIL*PSWISI
Trigger: TATAGAAATCCATGAAGGCAATAAGATAGACAGCTG...GGAGTAAAGGGAATCTCCCAAGATTATTGTAGATTTGTGGCGTAATGAGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668657.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCGTTACAATGTTCACTTaGCACAACTATCCCTATAGT +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSVTMFT*HNYPYS
Trigger: ACTATAGGGATAGTTGTGCAAAGTGAACATTGTAAC...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAATGGACAGAGCAGGTaGAATTCATTCTATCACCAA +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYNGQSR*NSFYHQ
Trigger: TTGGTGATAGAATGAATTCAACCTGCTCTGTCCATT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGATCCAGTGTGTTTCCTaGAAATCTAGAGAGATACCA +
Preference number: 5 (lower is better)
Translates to: LLICLCSVVLLGESCTSLIQCVS*KSREIP
Trigger: TGGTATCTCTCTAGATTTCAAGGAAACACACTGGAT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp TGCAAGGACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAATCTAGGTTTGAGTGTTaGACCAATGTATCTCCTATT +
Preference number: 5 (lower is better)
Translates to: CKDCTKGVWCSYNVHFAQSRFEC*TNVSPI
Trigger: AATAGGAGATACATTGGTCAAACACTCAAACCTAGA...TTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTCCTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GACTGTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCTCTAGGTTTGAGTGTTaGACCAATGTATCTCCTATT +
Preference number: 5 (lower is better)
Translates to: DCTKGVWCSYNVHFAQLSSRFEC*TNVSPI
Trigger: AATAGGAGATACATTGGTCAAACACTCAAACCTAGA...GGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTACAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGATTACGTGTAGCTTCTaGCATACGAATTACCTTAGA +
Preference number: 5 (lower is better)
Translates to: LLICLCSVVLLGESCTSLITCSF*HTNYLR
Trigger: TCTAAGGTAATTCGTATGCAAGAAGCTACACGTAAT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATAGTCACTATTTGGCTTaGGTTTGTTCTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSHYLA*VCSHHH
Trigger: ATGATGATGAGAACAAACCAAAGCCAAATAGTGACT...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGAGTCACTATTTGGCTTaGGTTTGTTCTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: LLICLCSVVLLGESCTSLSHYLA*VCSHHH
Trigger: ATGATGATGAGAACAAACCAAAGCCAAATAGTGACT...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGCAGCTGTCTATCTTATaGCCTTCATGGATTTCTATA +
Preference number: 5 (lower is better)
Translates to: LLICLCSVVLLGESCTSLQLSIL*PSWISI
Trigger: TATAGAAATCCATGAAGGCAATAAGATAGACAGCTG...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp CTTTTAATTTGCCTTTGTTCTGTAGTACTGCTTGGTGAATCATGCACTAGTTTGTATTCTAGCATGGTTTaGATAGTCTTTCGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LLICLCSVVLLGESCTSLYSSMV*IVFRCS
Trigger: TGAACAGCGAAAGACTATCAAAACCATGCTAGAATA...CAAACTAGTGCATGATTCACCAAGCAGTACTACAGAACAAAGGCAAATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp GTACTAAAGGTGTTTGGTGTAGTTACAATGTTCACTTTGCACAACTATCCCTATTCTAGGTTTGAGTGTTaGACCAATGTATCTCCTATT +
Preference number: 5 (lower is better)
Translates to: VLKVFGVVTMFTLHNYPYSRFEC*TNVSPI
Trigger: AATAGGAGATACATTGGTCAAACACTCAAACCTAGA...ATAGGGATAGTTGTGCAAAGTGAACATTGTAACTACACCAAACACCTTTAGTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
CDS-3UTR CAA 90 bp TCATTTGAGAGACAGGGTTCTTGTATACTGTTTCTTCAACGTAAACCTCATTTACAGCTGTCTATCTTATaGCCTTCATGGATTTCTATA +
Preference number: 5 (lower is better)
Translates to: SFERQGSCILFLQRKPHLQLSIL*PSWISI
Trigger: TATAGAAATCCATGAAGGCAATAAGATAGACAGCTG...TAAATGAGGTTTACGTTGAAGAAACAGTATACAAGAACCCTGTCTCTCAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000658209.1
CDS TCA 72 bp GCTCCTTTCCCAGTAAGCCACTCTACTATGAATCCTTaGCAGGTATCTCATCCCTGTCAAACCTTGATGTGG +
Preference number: 6 (lower is better)
Translates to: APFPVSHSTMNP*QVSHPCQTLMW
Trigger: CCACATCAAGGTTTGACAGGGATGAGATACCTGTCAAGGATTCATAGTAGAGTGGCTTACTGGGAAAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000453007.1
ENST00000638473.1
ENST00000639244.1
ENST00000668657.1
CDS CAA 90 bp GAGATTCTTTGCTCCTTTCCCAGTAAGCCACTCTACTATGAATCCTaGACAGGTATCTCATCCCTGTCAAACCTTGATGTGGCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: EILCSFPSKPLYYES*TGISSLSNLDVAWL
Trigger: AAGCCAAGCCACATCAAGGTTTGACAGGGATGAGATACCTGTCAAGGATTCATAGTAGAGTGGCTTACTGGGAAAGGAGCAAAGAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000453007.1
ENST00000638473.1
ENST00000639244.1
ENST00000668657.1
CDS CAA 72 bp TGCTCCTTTCCCAGTAAGCCACTCTACTATGAATCCTaGACAGGTATCTCATCCCTGTCAAACCTTGATGTG +
Preference number: 6 (lower is better)
Translates to: CSFPSKPLYYES*TGISSLSNLDV
Trigger: CACATCAAGGTTTGACAGGGATGAGATACCTGTCAAGGATTCATAGTAGAGTGGCTTACTGGGAAAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000453007.1
ENST00000638473.1
ENST00000639244.1
ENST00000668657.1
CDS CAA 90 bp ACGCTGTCTTCAGATTCGGATTTGGGAAAGCTGTCTCTCTCTCCTTaGTTGTTTCCTTCAAGGTGCTCTCTCTGTCTTCTTTTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: TLSSDSDLGKLSLSP*LFPSRCSLCLLFFL
Trigger: AAGGAAGAAAAGAAGACAGAGAGAGCACCTTGAAGGAAACAACAAAGGAGAGAGAGACAGCTTTCCCAAATCCGAATCTGAAGACAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000440431.6
ENST00000638473.1
ENST00000639244.1
ENST00000640652.1
ENST00000668657.1
CDS CCA 72 bp CAAGTCCCAGTTCTGGCAATTACAAGATTTGTGACTTaGGGCATGATTCGTATGTTCTTTGGGCCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: QVPVLAITRFVT*GMIRMFFGPQF
Trigger: AAACTGAGGCCCAAAGAACATACGAATCATGCCCCAAGTCACAAATCTTGTAATTGCCAGAACTGGGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465043.1
CDS CCA 72 bp AAGATTTGTGACTTGGGGCATGATTCGTATGTTCTTTaGGCCTCAGTTTCCTTACTCCTTACCAATCTCAGA +
Preference number: 6 (lower is better)
Translates to: KICDLGHDSYVL*ASVSLLLTNLR
Trigger: TCTGAGATTGGTAAGGAGTAAGGAAACTGAGGCCCAAAGAACATACGAATCATGCCCCAAGTCACAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465043.1
CDS CCA 72 bp ACAGGTATCTCATCCCTGTCAAACCTTGATGTGGCTTaGCTTCAGTTTTCTTGCTCCATAATCTCTGATAAA +
Preference number: 6 (lower is better)
Translates to: TGISSLSNLDVA*LQFSCSIISDK
Trigger: TTTATCAGAGATTATGGAGCAAGAAAACTGAAGCCAAGCCACATCAAGGTTTGACAGGGATGAGATACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000453007.1
ENST00000639244.1
ENST00000668657.1
CDS GCA 72 bp CTGTCAAACCTTGATGTGGCTTGGCTTCAGTTTTCTTaGTCCATAATCTCTGATAAAACAGAGCCTTATGAA +
Preference number: 6 (lower is better)
Translates to: LSNLDVAWLQFS*SIISDKTEPYE
Trigger: TTCATAAGGCTCTGTTTTATCAGAGATTATGGAGCAAGAAAACTGAAGCCAAGCCACATCAAGGTTTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000453007.1
ENST00000639244.1
ENST00000668657.1
CDS GCA 72 bp TCATTTATTCTTACAATATCCCTAGAAGAGATTCTTTaGTCCTTTCCCAGTAAGCCACTCTACTATGAATCC +
Preference number: 6 (lower is better)
Translates to: SFILTISLEEIL*SFPSKPLYYES
Trigger: GGATTCATAGTAGAGTGGCTTACTGGGAAAGGAGCAAAGAATCTCTTCTAGGGATATTGTAAGAATAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283254.12
ENST00000409101.7
ENST00000453007.1
ENST00000638473.1
ENST00000639244.1
ENST00000668657.1