RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCN2A (Homo sapiens)

Ensembl gene IDs: ENSG00000136531

Ensembl transcript IDs: ENST00000283256.10, ENST00000375437.7, ENST00000480032.4, ENST00000631182.2, ENST00000635945.1, ENST00000636071.2, ENST00000636135.1, ENST00000636384.2, ENST00000636662.2, ENST00000636769.1, ENST00000636985.2, ENST00000637266.2, ENST00000637367.1, ENST00000638151.1, ENST00000640791.1, ENST00000673831.1, ENST00000673883.1, ENST00000674133.1

Found 1049 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCTGCTGACATCGGTAGCAGAACCACTGGCAGCTTCCTCTCAGTaGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAA +
Preference number: 1 (lower is better)
Translates to: MLLTSVAEPLAASSQ*FCYGKERKARQSSK
Trigger: TTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGCCAGTGGTTCTGCTACCGATGTCAGCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
3UTR CCA 90 bp ATCGGTAGCAGAACCACTGGCAGCTTCCTCTCAGTGGTTTTGCTATaGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGG +
Preference number: 1 (lower is better)
Translates to: IGSRTTGSFLSVVLL*QGAEGQTIFKRFTW
Trigger: CCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGCCAGTGGTTCTGCTACCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR GCA 90 bp CTGACATCGGTAGCAGAACCACTGGCAGCTTCCTCTCAGTGGTTTTaGTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTA +
Preference number: 1 (lower is better)
Translates to: LTSVAEPLAASSQWF*YGKERKARQSSKDL
Trigger: TAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGCCAGTGGTTCTGCTACCGATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
3UTR CCA 90 bp CTAAGAATGGCTCATAAAAATCCTGGTCTGGGAAACAGTAGTTTGTaGTCCCAGCTCTGTCTTGTCTGTAGACTAGGCTGGCAGTCCCAT +
Preference number: 1 (lower is better)
Translates to: LRMAHKNPGLGNSSL*SQLCLVCRLGWQSH
Trigger: ATGGGACTGCCAGCCTAGTCTACAGACAAGACAGAGCTGGGACCACAAACTACTGTTTCCCAGACCAGGATTTTTATGAGCCATTCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673831.1
3UTR GCA 90 bp CCTCACCAGTTCTCTGCCTGTCTCACAAATGCAGGTTCAAATGAGTaGTTCCAAAAGACTTCTAGGATCATTGGTCCATTACACGGTCAG +
Preference number: 1 (lower is better)
Translates to: PHQFSACLTNAGSNE*FQKTSRIIGPLHGQ
Trigger: CTGACCGTGTAATGGACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGAGACAGGCAGAGAACTGGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR TCA 90 bp GGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTaGATTCTCATTCAGTTTATCAATGAGAGTATCTTCTTTGATGGG +
Preference number: 1 (lower is better)
Translates to: GWRRGGRRHIGFLWS*ILIQFINESIFFDG
Trigger: CCCATCAAAGAAGATACTCTCATTGATAAACTGAATGAGAATTCAACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR GCA 90 bp AAACGTCAGTTCTCTGCCTGTCTCACAAATGCAGGTTCAAATGAGTaGTTCCAAAAGACTTCTAGGATCATTGGTCCATTACACGGTCAG +
Preference number: 1 (lower is better)
Translates to: KRQFSACLTNAGSNE*FQKTSRIIGPLHGQ
Trigger: CTGACCGTGTAATGGACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGAGACAGGCAGAGAACTGACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR GCA 90 bp TCTGCTTCTAGAACTATCAGTTTTCAGAAAGTCACATTCTTTTTCTaGAGCACCTATCTTCAACCAATGAAGGGTCTCTTGCCATCGTGT +
Preference number: 1 (lower is better)
Translates to: SASRTISFQKVTFFF*STYLQPMKGLLPSC
Trigger: ACACGATGGCAAGAGACCCTTCATTGGTTGAAGATAGGTGCTGCAGAAAAAGAATGTGACTTTCTGAAAACTGATAGTTCTAGAAGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673831.1
3UTR TCA 90 bp CAAAGTCACAAATTAACACATTTAACATATGGCAGAGCCAGAAATTaGTCACAGATTAAGCTGTCCCCAAAGTCTTTATTTTGGCATTCT +
Preference number: 1 (lower is better)
Translates to: QSHKLTHLTYGRARN*SQIKLSPKSLFWHS
Trigger: AGAATGCCAAAATAAAGACTTTGGGGACAGCTTAATCTGTGATCAATTTCTGGCTCTGCCATATGTTAAATGTGTTAATTTGTGACTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: FKRFTWRDREEQATGSWGGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 2 (lower is better)
Translates to: FKRFTWRDREEQATGSWGEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAACGAGGGTGGAGACGTaGTGGAAGGCGTCATATCGG +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRTRVET*WKASYR
Trigger: CCGATATGACGCCTTCCACCACGTCTCCACCCTCGT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGACAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRTTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATCCCACCAGCACCACTaGAGTCTCTTGATTCAGCAG +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRSHQHH*SLLIQQ
Trigger: CTGCTGAATCAAGAGACTTCAGTGGTGCTGGTGGGA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR CCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAACTATCATACGAGGGTaGAGACGTGGTGGAAGGCGT +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRTIIRG*RRGGRR
Trigger: ACGCCTTCCACCACGTCTCCACCCTCGTATGATAGT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGCAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 2 (lower is better)
Translates to: FKRFTWRDREEQATGSWGQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATCCTTCTCTACTTCCTaGTTTAGGGAGCAGACATGC +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRSFSTS*FREQTC
Trigger: GCATGTCTGCTCCCTAAAGCAGGAAGTAGAGAAGGA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
3UTR-3UTR CCA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGTCAGTGGTTTTGCTATaGCAAGGAGCGGAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSSVVLL*QGAEGQ
Trigger: CTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGA...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636384.2
3UTR-3UTR CCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGTCAGTGGTTTTGCTATaGCAAGGAGCGGAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: FKRFTWRDREEQATGSWGSVVLL*QGAEGQ
Trigger: CTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGA...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp CAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGAGGGACAGGGAGCAAGCTACTGGCAGCTaGGGGGAAGAGGGAGTGCAA +
Preference number: 2 (lower is better)
Translates to: QGAEGQTIFKRFTWRDREQATGS*GEEGVQ
Trigger: TTGCACTCCCTCTTCCCCCCAGCTGCCAGTAGCTTG...CTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR TCA 90 bp TGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTCACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 2 (lower is better)
Translates to: WFCYGKERKARQSSKDLPHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...AGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGGTTGCATTTAGCTTCTaGGTAAAAGTGGTGGCACGA +
Preference number: 2 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLVAFSF*VKVVAR
Trigger: TCGTGCCACCACTTTTACCCAGAAGCTAAATGCAAC...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674133.1
3UTR-3UTR TCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 2 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGACAGCATTTTCCTGCATaGATTTCACCAACACACTAC +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRQHFPA*ISPTHY
Trigger: GTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTG...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: FKRFTWRDREEQATGSWGRANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATTATCTGACAACACTTaGACTTCCGTACACAGTCTT +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRLSDNT*TSVHSL
Trigger: AAGACTGTGTACGGAAGTTCAAGTGTTGTCAGATAA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATCTTCTATGCTTATCTaGCAACACTTGAACTTCCGT +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRSSMLI*QHLNFR
Trigger: ACGGAAGTTCAAGTGTTGTCAGATAAGCATAGAAGA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGACTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRLFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGTCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR CAA 90 bp GCTGACATCGGTAGCAGAACCACTGGCAGCTTCCTCTCAGTGGTTTaGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTT +
Preference number: 2 (lower is better)
Translates to: ADIGSRTTGSFLSVV*LWQGAEGQTIFKRF
Trigger: AAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGCCAGTGGTTCTGCTACCGATGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
3UTR-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATTGGTAAAATACACTTaGAAACCATATGCAACCCAC +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRLVKYT*KPYATH
Trigger: GTGGGTTGCATATGGTTTTCAAGTGTATTTTACCAA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATACAATGGTAAAACTTaGCAGCAAAGAGATTCACTC +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRYNGKT*QQRDSL
Trigger: GAGTGAATCTCTTTGCTGGCAAGTTTTACCATTGTA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 2 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR GCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAACCCTCTGGTAGGAGCTaGCCAGCAGATGTGAGGGTA +
Preference number: 2 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKPSGRS*PADVRV
Trigger: TACCCTCACATCTGCTGGGCAGCTCCTACCAGAGGG...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 2 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGAGGGACAGGGAGATACTGACTTGTCTGTaGTGTACACAGTCGTCTACA +
Preference number: 2 (lower is better)
Translates to: QGAEGQTIFKRFTWRDREILTCL*CTQSST
Trigger: TGTAGACGACTGTGTACATCACAGACAAGTCAGTAT...CTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp TGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTCAGTCCACAGCGCTATaGATCTTCCCATTCATGGGC +
Preference number: 2 (lower is better)
Translates to: WFCYGKERKARQSSKDLPQSTAL*IFPFMG
Trigger: GCCCATGAATGGGAAGATGCATAGCGCTGTGGACTG...AGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCCCTCTGGTAGGAGCTaGCCAGCAGATGTGAGGGTA +
Preference number: 2 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNPSGRS*PADVRV
Trigger: TACCCTCACATCTGCTGGGCAGCTCCTACCAGAGGG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR GCA 90 bp CAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGAGGGACAGGGAGTTGCCCATGAACAACTaGAATCCTATTAGCGCAAAC +
Preference number: 2 (lower is better)
Translates to: QGAEGQTIFKRFTWRDRELPMNN*NPISAN
Trigger: GTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA...CTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAATGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR CAA 90 bp AAACTAAGAATGGCTCATAAAAATCCTGGTCTGGGAAACAGTAGTTaGTGGTCCCAGCTCTGTCTTGTCTGTAGACTAGGCTGGCAGTCC +
Preference number: 2 (lower is better)
Translates to: KLRMAHKNPGLGNSS*WSQLCLVCRLGWQS
Trigger: GGACTGCCAGCCTAGTCTACAGACAAGACAGAGCTGGGACCACAAACTACTGTTTCCCAGACCAGGATTTTTATGAGCCATTCTTAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673831.1
3UTR-3UTR TCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTTTATCTGACAACACTTaGACTTCCGTACACAGTCTT +
Preference number: 2 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVLSDNT*TSVHSL
Trigger: AAGACTGTGTACGGAAGTTCAAGTGTTGTCAGATAA...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGGGCAGGGGTGGCACTaGATCGAGAGATTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVGQGWH*IERLLS
Trigger: GGAAAGCAATCTCTCGATTCAGTGCCACCCCTGCCC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR TCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCGGGCAGGGGTGGCACTaGATCGAGAGATTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFGQGWH*IERLLS
Trigger: GGAAAGCAATCTCTCGATTCAGTGCCACCCCTGCCC...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
3UTR-3UTR GCA 90 bp CAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGAGGGACAGGGAGATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 2 (lower is better)
Translates to: QGAEGQTIFKRFTWRDREILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...CTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTTCCCGCGCTGGAGGATaGCTCACCAGTTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSSRAGG*LTSSLP
Trigger: AGGCAGAGAACTGGTGAGGCATCCTCCAGCGCGGGA...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR GCA 90 bp ATCCATTCAACAACCTTATGCCTAAACATCATCATCCACATTTTACTGATGAGGTTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 2 (lower is better)
Translates to: IHSTTLCLNIIIHILLMRFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...CCTCATCAGTAAAATGTGGATGATGATGTTTAGGCATAAGGTTGTTGAATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGTTATTAACTGTCTTCTaGATGCCAAATACATCAGTG +
Preference number: 2 (lower is better)
Translates to: FKRFTWRDREEQATGSWGLLTVF*MPNTSV
Trigger: CACTGATGTATTTGGCATGCAGAAGACAGTTAATAA...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTTCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTTTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 2 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVLSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR CCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTAGTTCTAGTGCCATATaGGTCAATAAGATCTATCTG +
Preference number: 2 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVSSSAI*VNKIYL
Trigger: CAGATAGATCTTATTGACCCATATGGCACTAGAACT...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTTATAACTTCACTACCTaGTTTTGTGGGAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVYNFTT*FCGRGK
Trigger: TTTTCCTCTCCCACAAAACCAGGTAGTGAAGTTATA...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAAGCAGCTTCCTCTCAGTaGTTTTGCTATGGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKAASSQ*FCYGKE
Trigger: CTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGC...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAACGAGGGTGGAGACGTaGTGGAAGGCGTCATATCGG +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVTRVET*WKASYR
Trigger: CCGATATGACGCCTTCCACCACGTCTCCACCCTCGT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR CCA 90 bp ATCCATTCAACAACCTTATGCCTAAACATCATCATCCACATTTTACTGATGAGGGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 2 (lower is better)
Translates to: IHSTTLCLNIIIHILLMRASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...CCTCATCAGTAAAATGTGGATGATGATGTTTAGGCATAAGGTTGTTGAATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR CAA 90 bp CAAATGCAGGTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATaGGTCCATTACACGGTCAGGCCCATCCAGCATCTTAGTGATACT +
Preference number: 2 (lower is better)
Translates to: QMQVQMSASKRLLGS*VHYTVRPIQHLSDT
Trigger: AGTATCACTAAGATGCTGGATGGGCCTGACCGTGTAATGGACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
3UTR-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTTGGTTCCTATCGTCTaGGTAGCCATTACGCCTCTG +
Preference number: 2 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALVPIV*VAITPL
Trigger: CAGAGGCGTAATGGCTACTCAGACGATAGGAACCAA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGACCATTCCCATCCAATaGATTGTTAAAGAAGGAAGT +
Preference number: 2 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKTIPIQ*IVKEGS
Trigger: ACTTCCTTCTTTAACAATTCATTGGATGGGAATGGT...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636384.2
3UTR-3UTR CCA 90 bp CAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGAGGGACAGGGAGAAAGGAAGAATTATCTaGAGGCCATTGCAAACATTT +
Preference number: 2 (lower is better)
Translates to: QGAEGQTIFKRFTWRDREKGRII*RPLQTF
Trigger: AAATGTTTGCAATGGCCTCCAGATAATTCTTCCTTT...CTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR TCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTCAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 2 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636135.1
ENST00000636662.2
ENST00000637367.1
3UTR-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp ATCCATTCAACAACCTTATGCCTAAACATCATCATCCACATTTTACTGATGAGGACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: IHSTTLCLNIIIHILLMRTTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...CCTCATCAGTAAAATGTGGATGATGATGTTTAGGCATAAGGTTGTTGAATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGCAGCTTCCTCTCAGTaGTTTTGCTATGGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVAASSQ*FCYGKE
Trigger: CTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636384.2
3UTR-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACACTATCATACGAGGGTaGAGACGTGGTGGAAGGCGT +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHTIIRG*RRGGRR
Trigger: ACGCCTTCCACCACGTCTCCACCCTCGTATGATAGT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACATGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR CCA 90 bp TGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTATGCTCAGTAAGGACTaGTGTGGAGAAGAAAATCTC +
Preference number: 2 (lower is better)
Translates to: WFCYGKERKARQSSKDLPMLSKD*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGTCCTTACTGAGCAT...AGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTGGTTCCTATCGTCTaGGTAGCCATTACGCCTCTG +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLVPIV*VAITPL
Trigger: CAGAGGCGTAATGGCTACTCAGACGATAGGAACCAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTTGGTTCCTATCGTCTaGGTAGCCATTACGCCTCTG +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYILVPIV*VAITPL
Trigger: CAGAGGCGTAATGGCTACTCAGACGATAGGAACCAA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTGGTTCCTATCGTCTaGGTAGCCATTACGCCTCTG +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHALVPIV*VAITPL
Trigger: CAGAGGCGTAATGGCTACTCAGACGATAGGAACCAA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAATTCGTAGGTTGCCCATaGACAACTGCAATCCTATTA +
Preference number: 2 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKFVGCP*TTAILL
Trigger: TAATAGGATTGCAGTTGTTCATGGGCAACCTACGAA...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATCCTCTCAGTGGTTTTaGTATGGCAAGGAGCGGAAG +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEESSQWF*YGKERK
Trigger: CTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636384.2
3UTR-3UTR GCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTTCCTCTCAGTGGTTTTaGTATGGCAAGGAGCGGAAG +
Preference number: 2 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSSSQWF*YGKERK
Trigger: CTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGA...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVRANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR GCA 90 bp TGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTAATATACCTTACATTTaGAGCAGCTTTCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: WFCYGKERKARQSSKDLPNIPYI*SSFLEA
Trigger: AGCCTCCAGAAAGCTGCTGCAAATGTAAGGTATATT...AGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp ATCCATTCAACAACCTTATGCCTAAACATCATCATCCACATTTTACTGATGAGGTATCCTTCAGGACACTaGCCTGCATCTGAGCTGTTG +
Preference number: 2 (lower is better)
Translates to: IHSTTLCLNIIIHILLMRYPSGH*PASELL
Trigger: CAACAGCTCAGATGCAGGCCAGTGTCCTGAAGGATA...CCTCATCAGTAAAATGTGGATGATGATGTTTAGGCATAAGGTTGTTGAATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR TCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACATTGGTTCCTATCGTCTaGGTAGCCATTACGCCTCTG +
Preference number: 2 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTLVPIV*VAITPL
Trigger: CAGAGGCGTAATGGCTACTCAGACGATAGGAACCAA...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 2 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSRANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636135.1
ENST00000636662.2
ENST00000637367.1
3UTR-3UTR TCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCATAAACATGCAGCAGTaGCAGCTTCAAACTATAATG +
Preference number: 2 (lower is better)
Translates to: NESFALTVVVDHAYIKHLINMQQ*QLQTIM
Trigger: CATTATAGTTTGAAGCTGTCACTGCTGCATGTTTAT...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 2 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTCTTCTATGCTTATCTaGCAACACTTGAACTTCCGT +
Preference number: 2 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNSSMLI*QHLNFR
Trigger: ACGGAAGTTCAAGTGTTGTCAGATAAGCATAGAAGA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTAAACGTGGCTACTTaGAGTAGAGACAGATATCCA +
Preference number: 2 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLNVAT*SRDRYP
Trigger: TGGATATCTGTCTCTACTTCAAGTAGCCACGTTTAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 2 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCTGCATCCTAGTCCTTaGTTCTTATTTTGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLHPSP*FLFCEV
Trigger: CACTTCACAAAATAAGAAGCAAGGACTAGGATGCAG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVSRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHSRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEESRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: NESFALTVVVDHAYIKHLISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTGCTGGGACTGTGAATaGCAATGTAATGGTATGTGT +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHCWDCE*QCNGMC
Trigger: ACACATACCATTACATTGTCATTCACAGTCCCAGCA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTGCTGGGACTGTGAATaGCAATGTAATGGTATGTGT +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYICWDCE*QCNGMC
Trigger: ACACATACCATTACATTGTCATTCACAGTCCCAGCA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATGCTGGGACTGTGAATaGCAATGTAATGGTATGTGT +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVCWDCE*QCNGMC
Trigger: ACACATACCATTACATTGTCATTCACAGTCCCAGCA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATGCTGGGACTGTGAATaGCAATGTAATGGTATGTGT +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHACWDCE*QCNGMC
Trigger: ACACATACCATTACATTGTCATTCACAGTCCCAGCA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATGCTGGGACTGTGAATaGCAATGTAATGGTATGTGT +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEECWDCE*QCNGMC
Trigger: ACACATACCATTACATTGTCATTCACAGTCCCAGCA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTATAAACATGCAGCAGTaGCAGCTTCAAACTATAATG +
Preference number: 2 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAINMQQ*QLQTIM
Trigger: CATTATAGTTTGAAGCTGTCACTGCTGCATGTTTAT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAACTCACTGTAGTTGTTaGCCACGCTTACATCAAACA +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEETHCSC*PRLHQT
Trigger: TGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTTGATTGCTCTCAATaGGAGCTTTGCACTCACTGT +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHFDCSQ*ELCTHC
Trigger: ACAGTGAGTGCAAAGCTCTCATTGAGAGCAATCAAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTTCGTAGGTTGCCCATaGACAACTGCAATCCTATTA +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIFVGCP*TTAILL
Trigger: TAATAGGATTGCAGTTGTTCATGGGCAACCTACGAA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACAGCATTTTCCTGCATaGATTTCACCAACACACTAC +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEQHFPA*ISPTHY
Trigger: GTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCAGCATTTTCCTGCATaGATTTCACCAACACACTAC +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHQHFPA*ISPTHY
Trigger: GTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGCAGGTTCAAATGAGTaGTTCCAAAAGACTTCTAGG +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAAGSNE*FQKTSR
Trigger: CCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCACCTACAAGTCACCTaGTATTATTCCTTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIHLQVT*YYSFCG
Trigger: TCCACAGAAGGAATAATAGCAGGTGACTTGTAGGTG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR CCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 2 (lower is better)
Translates to: NESFALTVVVDHAYIKHLKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTATAACTTCACTACCTaGTTTTGTGGGAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNYNFTT*FCGRGK
Trigger: TTTTCCTCTCCCACAAAACCAGGTAGTGAAGTTATA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCGATCAAAGTGACTTATaGAGAGCTAGAGACTATAAA +
Preference number: 2 (lower is better)
Translates to: NESFALTVVVDHAYIKHLDQSDL*RARDYK
Trigger: TTTATAGTCTCTAGCTCTCCATAAGTCACTTTGATC...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR CAA 90 bp GGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATaGCTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCT +
Preference number: 2 (lower is better)
Translates to: GRIKSKKLFLVCCNL*LNDMKNEVLVEQFA
Trigger: AGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATTATCTGACAACACTTaGACTTCCGTACACAGTCTT +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEELSDNT*TSVHSL
Trigger: AAGACTGTGTACGGAAGTTCAAGTGTTGTCAGATAA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCACTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHALFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYILFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEELFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCTGCATCCTAGTCCTTaGTTCTTATTTTGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYILHPSP*FLFCEV
Trigger: CACTTCACAAAATAAGAAGCAAGGACTAGGATGCAG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACTGCATCCTAGTCCTTaGTTCTTATTTTGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEELHPSP*FLFCEV
Trigger: CACTTCACAAAATAAGAAGCAAGGACTAGGATGCAG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCACTGCATCCTAGTCCTTaGTTCTTATTTTGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHALHPSP*FLFCEV
Trigger: CACTTCACAAAATAAGAAGCAAGGACTAGGATGCAG...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCTGCATCCTAGTCCTTaGTTCTTATTTTGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLHPSP*FLFCEV
Trigger: CACTTCACAAAATAAGAAGCAAGGACTAGGATGCAG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACACCAGAGTTTCCCTTTaGCTTCTTCTATGCTTATCT +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHTRVSL*LLLCLS
Trigger: AGATAAGCATAGAAGAAGGCAAAGGGAAACTCTGGT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 2 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636135.1
ENST00000636662.2
ENST00000637367.1
3UTR-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCATAAACATGCAGCAGTaGCAGCTTCAAACTATAATG +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIINMQQ*QLQTIM
Trigger: CATTATAGTTTGAAGCTGTCACTGCTGCATGTTTAT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAATAAACATGCAGCAGTaGCAGCTTCAAACTATAATG +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEINMQQ*QLQTIM
Trigger: CATTATAGTTTGAAGCTGTCACTGCTGCATGTTTAT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAATAAACATGCAGCAGTaGCAGCTTCAAACTATAATG +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAINMQQ*QLQTIM
Trigger: CATTATAGTTTGAAGCTGTCACTGCTGCATGTTTAT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTGGTAAAATACACTTaGAAACCATATGCAACCCAC +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLVKYT*KPYATH
Trigger: GTGGGTTGCATATGGTTTTCAAGTGTATTTTACCAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTTGGTAAAATACACTTaGAAACCATATGCAACCCAC +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYILVKYT*KPYATH
Trigger: GTGGGTTGCATATGGTTTTCAAGTGTATTTTACCAA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGGTTTTCTCTGGAGTTaGATTCTCATTCAGTTTATC +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHGFLWS*ILIQFI
Trigger: GATAAACTGAATGAGAATTCAACTCCAGAGAAAACC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATACAATGGTAAAACTTaGCAGCAAAGAGATTCACTC +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAYNGKT*QQRDSL
Trigger: GAGTGAATCTCTTTGCTGGCAAGTTTTACCATTGTA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTTTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 2 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSLSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
3UTR-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 2 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAGTTCTAGTGCCATATaGGTCAATAAGATCTATCTG +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHSSSAI*VNKIYL
Trigger: CAGATAGATCTTATTGACCCATATGGCACTAGAACT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAAGTTCTAGTGCCATATaGGTCAATAAGATCTATCTG +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHASSSAI*VNKIYL
Trigger: CAGATAGATCTTATTGACCCATATGGCACTAGAACT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAAGTTCTAGTGCCATATaGGTCAATAAGATCTATCTG +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVSSSAI*VNKIYL
Trigger: CAGATAGATCTTATTGACCCATATGGCACTAGAACT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTATAACTTCACTACCTaGTTTTGTGGGAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIYNFTT*FCGRGK
Trigger: TTTTCCTCTCCCACAAAACCAGGTAGTGAAGTTATA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATATAACTTCACTACCTaGTTTTGTGGGAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEYNFTT*FCGRGK
Trigger: TTTTCCTCTCCCACAAAACCAGGTAGTGAAGTTATA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp ATCCATTCAACAACCTTATGCCTAAACATCATCATCCACATTTTACTGATGAGGCCAAAGTCTTTATTTTaGCATTCTGAGATCCAGACT +
Preference number: 2 (lower is better)
Translates to: IHSTTLCLNIIIHILLMRPKSLF*HSEIQT
Trigger: AGTCTGGATCTCAGAATGCCAAAATAAAGACTTTGG...CCTCATCAGTAAAATGTGGATGATGATGTTTAGGCATAAGGTTGTTGAATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAACTACTACATCTATTTaGGTGGAGCCACATCTGATA +
Preference number: 2 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTTTTSI*VEPHLI
Trigger: TATCAGATGTGGCTCCACCCAAATAGATGTAGTAGT...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673831.1
3UTR CAA 90 bp TCTGGAGTTGAATTCTCATTCAGTTTATCAATGAGAGTATCTTCTTaGATGGGTGTTCCATCACATTCTTTGCCTTTGTCTTTCTTGTAT +
Preference number: 2 (lower is better)
Translates to: SGVEFSFSLSMRVSS*MGVPSHSLPLSFLY
Trigger: ATACAAGAAAGACAAAGGCAAAGAATGTGATGGAACACCCATCAAAGAAGATACTCTCATTGATAAACTGAATGAGAATTCAACTCCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR GCA 90 bp ATCCATTCAACAACCTTATGCCTAAACATCATCATCCACATTTTACTGATGAGGACTGAATCGAGAGATTaGTTTCCCTTTATTCAATAC +
Preference number: 2 (lower is better)
Translates to: IHSTTLCLNIIIHILLMRTESRD*FPFIQY
Trigger: GTATTGAATAAAGGGAAAGCAATCTCTCGATTCAGT...CCTCATCAGTAAAATGTGGATGATGATGTTTAGGCATAAGGTTGTTGAATGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 2 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 2 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 2 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 2 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTTTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 2 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR CCA 72 bp ACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTaGGGGGAAGAGGGAGTGCAAGCTAACGCAGGCGAG +
Preference number: 3 (lower is better)
Translates to: TWRDREEQATGS*GEEGVQANAGE
Trigger: CTCGCCTGCGTTAGCTTGCACTCCCTCTTCCCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CAA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 3 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR CAA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTTTCCTCTCAGTGGTTTaGCTATGGCAAGGAGCGGAA +
Preference number: 3 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLFLSVV*LWQGAE
Trigger: TTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAA...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636384.2
3UTR CCA 72 bp GGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTaGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: GAEGQTIFKRFT*RDREEQATGSW
Trigger: CCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR CCA 72 bp ACATCGGTAGCAGAACCACTGGCAGCTTCCTCTCAGTaGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAA +
Preference number: 3 (lower is better)
Translates to: TSVAEPLAASSQ*FCYGKERKARQ
Trigger: TTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGCCAGTGGTTCTGCTACCGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
3UTR GCA 72 bp AGGCTTTTGTCCTTCCTTAATTCCCGCGCTGGAGGATaGCTCACCAGTTCTCTGCCTGTCTCACAAATGCAG +
Preference number: 3 (lower is better)
Translates to: RLLSFLNSRAGG*LTSSLPVSQMQ
Trigger: CTGCATTTGTGAGACAGGCAGAGAACTGGTGAGGCATCCTCCAGCGCGGGAATTAAGGAAGGACAAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR CAA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGCCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 3 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CAA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKRLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CAA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAAATGTTTGTCATTTCTaGACTCTGGTCATCGGTTTC +
Preference number: 3 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRNVCHF*TLVIGF
Trigger: GAAACCGATGACCAGAGTCAAGAAATGACAAACATT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGCCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 3 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CAA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 3 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR CAA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 3 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGACGGTTTTCTCTGGAGTaGAATTCTCATTCAGTTTAT +
Preference number: 3 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRRFSLE*NSHSVY
Trigger: ATAAACTGAATGAGAATTCAACTCCAGAGAAAACCG...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCCTGGCCTGGCTGACATaGCTGTGGCGCCGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFLAWLT*LWRRSP
Trigger: TGGAGAACGGCGCCACAGCAATGTCAGCCAGGCCAG...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
3UTR CCA 72 bp GCTCATAAAAATCCTGGTCTGGGAAACAGTAGTTTGTaGTCCCAGCTCTGTCTTGTCTGTAGACTAGGCTGG +
Preference number: 3 (lower is better)
Translates to: AHKNPGLGNSSL*SQLCLVCRLGW
Trigger: CCAGCCTAGTCTACAGACAAGACAGAGCTGGGACCACAAACTACTGTTTCCCAGACCAGGATTTTTATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673831.1
3UTR-3UTR CAA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTTGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 3 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCACTGGCCTGGCTGACATaGCTGTGGCGCCGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHALAWLT*LWRRSP
Trigger: TGGAGAACGGCGCCACAGCAATGTCAGCCAGGCCAG...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR CAA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTTCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 3 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVSGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGAAGGGACGTGTATGCTaGCTCTCTTTTGCTTTCATT +
Preference number: 3 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKKGRVC*LSFAFI
Trigger: AATGAAAGCAAAAGAGAGCAAGCATACACGTCCCTT...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR CCA 72 bp GACACATCTACACACACTCACACTCACACACATACCTaGGAAGGGGTACAAGGGAGAAGGTTTGTAAAGAGA +
Preference number: 3 (lower is better)
Translates to: DTSTHTHTHTHT*EGVQGRRFVKR
Trigger: TCTCTTTACAAACCTTCTCCCTTGTACCCCTTCCCAGGTATGTGTGTGAGTGTGAGTGTGTGTAGATGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CAA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAATTCCTCTCAGTGGTTTaGCTATGGCAAGGAGCGGAA +
Preference number: 3 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKFLSVV*LWQGAE
Trigger: TTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAA...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTACCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 3 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSRLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636135.1
ENST00000636662.2
ENST00000637367.1
3UTR-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIRLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACGCAAGAAGCTCTTCCTaGTTTGCTGCAACCTATTGC +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNARSSS*FAATYC
Trigger: GCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGC...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 3 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 3 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 3 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTCCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 3 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
3UTR-3UTR CAA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCTGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 3 (lower is better)
Translates to: NESFALTVVVDHAYIKHLWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCAGCTTGCAACATGTTaGTACAGTCGGGCTTTTCAT +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNQLATC*YSRAFH
Trigger: ATGAAAAGCCCGACTGTACAAACATGTTGCAAGCTG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTATACCTTCCATGGTGTaGGTCAAAATACTGGCTATA +
Preference number: 3 (lower is better)
Translates to: WFCYGKERKARQSSKDLPIPSMV*VKILAI
Trigger: TATAGCCAGTATTTTGACCAACACCATGGAAGGTAT...AGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR GCA 72 bp TTCTCTGCCTGTCTCACAAATGCAGGTTCAAATGAGTaGTTCCAAAAGACTTCTAGGATCATTGGTCCATTA +
Preference number: 3 (lower is better)
Translates to: FSACLTNAGSNE*FQKTSRIIGPL
Trigger: TAATGGACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGAGACAGGCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
3UTR-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: QDKHAAVTASNYNGTNYILLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 3 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAGCAAGAAGCTCTTCCTaGTTTGCTGCAACCTATTGC +
Preference number: 3 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVARSSS*FAATYC
Trigger: GCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGC...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGCAAGAAGCTCTTCCTaGTTTGCTGCAACCTATTGC +
Preference number: 3 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAARSSS*FAATYC
Trigger: GCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGCAAGAAGCTCTTCCTaGTTTGCTGCAACCTATTGC +
Preference number: 3 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHARSSS*FAATYC
Trigger: GCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAGCAAGAAGCTCTTCCTaGTTTGCTGCAACCTATTGC +
Preference number: 3 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEARSSS*FAATYC
Trigger: GCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGC...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATTTCCACCTGGCAGTTaGATTGCTCTCAATGAGAGC +
Preference number: 3 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEFPPGS*IALNES
Trigger: GCTCTCATTGAGAGCAATCAAACTGCCAGGTGGAAA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAGACTTCTAGGATCATaGGTCCATTACACGGTCAGG +
Preference number: 3 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIRLLGS*VHYTVR
Trigger: CCTGACCGTGTAATGGACCAATGATCCTAGAAGTCT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR CAA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTAGACTTCTAGGATCATaGGTCCATTACACGGTCAGG +
Preference number: 3 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSRLLGS*VHYTVR
Trigger: CCTGACCGTGTAATGGACCAATGATCCTAGAAGTCT...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
3UTR-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATGCTCAGAATCTTATTaGGCACCTACAAGTCACCTG +
Preference number: 3 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVCSESY*APTSHL
Trigger: CAGGTGACTTGTAGGTGCCAAATAAGATTCTGAGCA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR CAA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACACTGGGAAACAGTAGTTaGTGGTCCCAGCTCTGTCTT +
Preference number: 3 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTLGNSS*WSQLCL
Trigger: AAGACAGAGCTGGGACCACAAACTACTGTTTCCCAG...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673831.1
3UTR-3UTR CAA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 3 (lower is better)
Translates to: NESFALTVVVDHAYIKHLVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNSGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACAGCTTGCAACATGTTaGTACAGTCGGGCTTTTCAT +
Preference number: 3 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVQLATC*YSRAFH
Trigger: ATGAAAAGCCCGACTGTACAAACATGTTGCAAGCTG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCAGCTTGCAACATGTTaGTACAGTCGGGCTTTTCAT +
Preference number: 3 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHQLATC*YSRAFH
Trigger: ATGAAAAGCCCGACTGTACAAACATGTTGCAAGCTG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCAGCTTGCAACATGTTaGTACAGTCGGGCTTTTCAT +
Preference number: 3 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIQLATC*YSRAFH
Trigger: ATGAAAAGCCCGACTGTACAAACATGTTGCAAGCTG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCACAGCTTGCAACATGTTaGTACAGTCGGGCTTTTCAT +
Preference number: 3 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAQLATC*YSRAFH
Trigger: ATGAAAAGCCCGACTGTACAAACATGTTGCAAGCTG...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACAGCTTGCAACATGTTaGTACAGTCGGGCTTTTCAT +
Preference number: 3 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEQLATC*YSRAFH
Trigger: ATGAAAAGCCCGACTGTACAAACATGTTGCAAGCTG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCATGCTCACTGTCCTATaGAAAGTAGTACCATTCCCA +
Preference number: 3 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFMLTVL*KVVPFP
Trigger: TGGGAATGGTACTACTTTCAATAGGACAGTGAGCAT...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
3UTR GCA 72 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTaGATGCATTTCACCAACACACTACAAGTCAATAGC +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFS*MHFTNTLQVNS
Trigger: GCTATTGACTTGTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 3 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 3 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACAATCATCATTTTTGTTaGCTCAAACATGCACCACTG +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNNHHFC*LKHAPL
Trigger: CAGTGGTGCATGTTTGAGCAAACAAAAATGATGATT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAATCATCATTTTTGTTaGCTCAAACATGCACCACTG +
Preference number: 3 (lower is better)
Translates to: GWKNKKQEALPCLLQPIANHHFC*LKHAPL
Trigger: CAGTGGTGCATGTTTGAGCAAACAAAAATGATGATT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 3 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCGCATTTAGCTTCTCTTaGCTTTCCTCCATATCTGAC +
Preference number: 3 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIAFSFS*LSSISD
Trigger: GTCAGATATGGAGGAAAGCAAAGAGAAGCTAAATGC...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGCATTTAGCTTCTCTTaGCTTTCCTCCATATCTGAC +
Preference number: 3 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHAFSFS*LSSISD
Trigger: GTCAGATATGGAGGAAAGCAAAGAGAAGCTAAATGC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 3 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636662.2
3UTR-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 3 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHASGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 3 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVSMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 3 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHASMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAAATGTTTGTCATTTCTaGACTCTGGTCATCGGTTTC +
Preference number: 3 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVNVCHF*TLVIGF
Trigger: GAAACCGATGACCAGAGTCAAGAAATGACAAACATT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
3UTR-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAATCATCATTTTTGTTaGCTCAAACATGCACCACTG +
Preference number: 3 (lower is better)
Translates to: QDKHAAVTASNYNGTNYINHHFC*LKHAPL
Trigger: CAGTGGTGCATGTTTGAGCAAACAAAAATGATGATT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAAATCATCATTTTTGTTaGCTCAAACATGCACCACTG +
Preference number: 3 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVNHHFC*LKHAPL
Trigger: CAGTGGTGCATGTTTGAGCAAACAAAAATGATGATT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 3 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHALPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 3 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 3 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 3 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 3 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 3 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 3 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTACCTTTTTAACTTTTaGCTTCAAGAGGTAGCGTCT +
Preference number: 3 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHYLFNF*LQEVAS
Trigger: AGACGCTACCTCTTGAAGCAAAAAGTTAAAAAGGTA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGCACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCTTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATCCCGCGCTGGAGGATaGCTCACCAGTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQSRAGG*LTSSLP
Trigger: AGGCAGAGAACTGGTGAGGCATCCTCCAGCGCGGGA...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAGGGCAGGGGTGGCACTaGATCGAGAGATTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRGQGWH*IERLLS
Trigger: GGAAAGCAATCTCTCGATTCAGTGCCACCCCTGCCC...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGACACTGGCCTGCATCTaGGCTGTTGCCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQTLACI*AVATKQ
Trigger: CTGCTTTGTGGCAACAGCTCAGATGCAGGCCAGTGT...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCACGAGGGTGGAGACGTaGTGGAAGGCGTCATATCGG +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCTRVET*WKASYR
Trigger: CCGATATGACGCCTTCCACCACGTCTCCACCCTCGT...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCACGAGGGTGGAGACGTaGTGGAAGGCGTCATATCGG +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFTRVET*WKASYR
Trigger: CCGATATGACGCCTTCCACCACGTCTCCACCCTCGT...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGGGGCAGGGGTGGCACTaGATCGAGAGATTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVGQGWH*IERLLS
Trigger: GGAAAGCAATCTCTCGATTCAGTGCCACCCCTGCCC...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAAACACTGGCCTGCATCTaGGCTGTTGCCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQTLACI*AVATKQ
Trigger: CTGCTTTGTGGCAACAGCTCAGATGCAGGCCAGTGT...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAACACTGGCCTGCATCTaGGCTGTTGCCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRTLACI*AVATKQ
Trigger: CTGCTTTGTGGCAACAGCTCAGATGCAGGCCAGTGT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTCACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGTTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAGGGAAGCTGTACCCTaGAAAGTGACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSREAVP*KVTGVE
Trigger: CTCCACCCCTGTCACTTTGCAGGGTACAGCTTCCCT...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCTGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLTTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFTTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATCCCACCAGCACCACTaGAGTCTCTTGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQSHQHH*SLLIQQ
Trigger: CTGCTGAATCAAGAGACTTCAGTGGTGCTGGTGGGA...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAACACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR TCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCCAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR GCA 90 bp GGCTTTTGTCCTTCCTTAATTCCCGCGCTGGAGGATGCCTCACCAGTTCTCTGCCCCTCTGGTAGGAGCTaGCCAGCAGATGTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: GFCPSLIPALEDASPVLCPSGRS*PADVRV
Trigger: TACCCTCACATCTGCTGGGCAGCTCCTACCAGAGGG...GCAGAGAACTGGTGAGGCATCCTCCAGCGCGGGAATTAAGGAAGGACAAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR CCA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAAGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCAGGGTGGAGACGTGGTaGAAGGCGTCATATCGGTTT +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCRVETW*KASYRF
Trigger: AAACCGATATGACGCCTTCCACCACGTCTCCACCCT...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCACTATCATACGAGGGTaGAGACGTGGTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFTIIRG*RRGGRR
Trigger: ACGCCTTCCACCACGTCTCCACCCTCGTATGATAGT...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAAACTATCATACGAGGGTaGAGACGTGGTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQTIIRG*RRGGRR
Trigger: ACGCCTTCCACCACGTCTCCACCCTCGTATGATAGT...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCACTATCATACGAGGGTaGAGACGTGGTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCTIIRG*RRGGRR
Trigger: ACGCCTTCCACCACGTCTCCACCCTCGTATGATAGT...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTTCAGTGGTTTTGCTATaGCAAGGAGCGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLSVVLL*QGAEGQ
Trigger: CTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGA...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGCAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCTTGGTTCCTATCGTCTaGGTAGCCATTACGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCLVPIV*VAITPL
Trigger: CAGAGGCGTAATGGCTACTCAGACGATAGGAACCAA...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTTTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGCAGTCCACAGCGCTATaGATCTTCCCATTCATGGGC +
Preference number: 4 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGQSTAL*IFPFMG
Trigger: GCCCATGAATGGGAAGATGCATAGCGCTGTGGACTG...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGAGGGAACCCACCTCTTaGATCAGCGTAACCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAREPTS*ISVTWC
Trigger: ACACCAGGTTACGCTGATGCAAGAGGTGGGTTCCCT...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR GCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAGCCACAGACATTCAATaGCAGCCCATGGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRATDIQ*QPMEVV
Trigger: GACTACTTCCATGGGCTGGCATTGAATGTCTGTGGC...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGTGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGGGTGGAGACGTGGTaGAAGGCGTCATATCGGTTT +
Preference number: 4 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGRVETW*KASYRF
Trigger: AAACCGATATGACGCCTTCCACCACGTCTCCACCCT...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGTCCCACCAGCACCACTaGAGTCTCTTGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSSHQHH*SLLIQQ
Trigger: CTGCTGAATCAAGAGACTTCAGTGGTGCTGGTGGGA...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR GCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCATCATCCTCATCCTTaGGTTCCTGTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLHHPHP*VPVWVS
Trigger: AGAGACCCAAACAGGAACGCAAGGATGAGGATGATG...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCTGCATCTGAGCTGTTaGCACAAAGCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLLHLSC*HKAEHH
Trigger: ATGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAG...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFRANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRRANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGTCCTCTCAGTGGTTTTaGTATGGCAAGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGSSQWF*YGKERK
Trigger: CTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGA...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGTCCTCTCAGTGGTTTTaGTATGGCAAGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVSSQWF*YGKERK
Trigger: CTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGA...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTCCTTCTCTACTTCCTaGTTTAGGGAGCAGACATGC +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAASFSTS*FREQTC
Trigger: GCATGTCTGCTCCCTAAAGCAGGAAGTAGAGAAGGA...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
CDS-3UTR CCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCTTGGGATTGATAAGCTaGCACCAAGAAGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFLGLIS*HQEDCS
Trigger: GCTGCAGTCTTCTTGGTGCCAGCTTATCAATCCCAA...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR TCA 90 bp CAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGAGGGACAGGGAGGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: QGAEGQTIFKRFTWRDREAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...CTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR TCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCATTGGTTCCTATCGTCTaGGTAGCCATTACGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISLVPIV*VAITPL
Trigger: CAGAGGCGTAATGGCTACTCAGACGATAGGAACCAA...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGCACTGTTTAGCTCCTTaGATAAGAAAGTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQHCLAP*IRKCPV
Trigger: TACAGGGCACTTTCTTATGCAAGGAGCTAAACAGTG...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCATCATCCTCATCCTTaGGTTCCTGTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVHHPHP*VPVWVS
Trigger: AGAGACCCAAACAGGAACGCAAGGATGAGGATGATG...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCSRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGCAGCATTTTCCTGCATaGATTTCACCAACACACTAC +
Preference number: 4 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQQHFPA*ISPTHY
Trigger: GTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTG...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGAAAGGGAGCCACGGATaGTCAGTAAGGACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAKGSHG*SVRTGK
Trigger: TTTTCCAGTCCTTACTGAGCATCCGTGGCTCCCTTT...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCATATCCTTCAGGACACTaGCCTGCATCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISYPSGH*PASELL
Trigger: CAACAGCTCAGATGCAGGCCAGTGTCCTGAAGGATA...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TCACAAATGCAGGTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATTGGTCGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SQMQVQMSASKRLLGSLVGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...GACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGACTCACACACATACCTaGGAAGGGGTACAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: FKRFTWRDREEQATGSWGTHTHT*EGVQGR
Trigger: TCTCCCTTGTACCCCTTCCCAGGTATGTGTGTGAGT...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR TCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTTTCGTAGGTTGCCCATaGACAACTGCAATCCTATTA +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLFVGCP*TTAILL
Trigger: TAATAGGATTGCAGTTGTTCATGGGCAACCTACGAA...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCGTAGGTTGCCCATaGACAACTGCAATCCTATTA +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAFVGCP*TTAILL
Trigger: TAATAGGATTGCAGTTGTTCATGGGCAACCTACGAA...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGACACTGGCCTGCATCTaGGCTGTTGCCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKTLACI*AVATKQ
Trigger: CTGCTTTGTGGCAACAGCTCAGATGCAGGCCAGTGT...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
CDS-3UTR TCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVTTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCCACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: NESFALTVVVDHAYIKHLHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCCAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCCAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGTCTTCTATGCTTATCTaGCAACACTTGAACTTCCGT +
Preference number: 4 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQSSMLI*QHLNFR
Trigger: ACGGAAGTTCAAGTGTTGTCAGATAAGCATAGAAGA...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATTTGATTGCTCTCAATaGGAGCTTTGCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRFDCSQ*ELCTHC
Trigger: ACAGTGAGTGCAAAGCTCTCATTGAGAGCAATCAAA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTTGATTGCTCTCAATaGGAGCTTTGCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAFDCSQ*ELCTHC
Trigger: ACAGTGAGTGCAAAGCTCTCATTGAGAGCAATCAAA...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTATGTTTGTCATTTCTTaGCTCTGGTCATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLMFVIS*LWSSVS
Trigger: GGAAACCGATGACCAGAGTCAAGAAATGACAAACAT...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAATGTTTGTCATTTCTTaGCTCTGGTCATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRMFVIS*LWSSVS
Trigger: GGAAACCGATGACCAGAGTCAAGAAATGACAAACAT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCTGCTGGGACTGTGAATaGCAATGTAATGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFCWDCE*QCNGMC
Trigger: ACACATACCATTACATTGTCATTCACAGTCCCAGCA...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGCATCATCCTCATCCTTaGGTTCCTGTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FKRFTWRDREEQATGSWGHHPHP*VPVWVS
Trigger: AGAGACCCAAACAGGAACGCAAGGATGAGGATGATG...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGTGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGTTGCCCATGAACAACTaGAATCCTATTAGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLLPMNN*NPISAN
Trigger: GTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCTGCATCTGAGCTGTTaGCACAAAGCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRLHLSC*HKAEHH
Trigger: ATGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAG...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCAGCATTTTCCTGCATaGATTTCACCAACACACTAC +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLQHFPA*ISPTHY
Trigger: GTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTG...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGGATTTACCTTACATTTaGAGCAGCTTTCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLDLPYI*SSFLEA
Trigger: AGCCTCCAGAAAGCTGCTGCAAATGTAAGGTAAATC...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636384.2
CDS-3UTR GCA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGTCCTTCTCTACTTCCTaGTTTAGGGAGCAGACATGC +
Preference number: 4 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSSFSTS*FREQTC
Trigger: GCATGTCTGCTCCCTAAAGCAGGAAGTAGAGAAGGA...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGGCAGGTTCAAATGAGTaGTTCCAAAAGACTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLAGSNE*FQKTSR
Trigger: CCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGC...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR CCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAATGCTCAGTAAGGACTaGTGTGGAGAAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRMLSKD*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGTCCTTACTGAGCAT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAATGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAACAGCGTAACCTGGTGTaGAGAAGAAAATCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQQRNLV*RRKSLF
Trigger: GAAAAGAGATTTTCTTCTCCACACCAGGTTACGCTG...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CCA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGTGCATCAGCGTAACCTaGTGTGGAGAAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGCISVT*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGGTTACGCTGATGCA...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGCAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR TCA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCTTATCTGACAACACTTaGACTTCCGTACACAGTCTT +
Preference number: 4 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSLSDNT*TSVHSL
Trigger: AAGACTGTGTACGGAAGTTCAAGTGTTGTCAGATAA...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCTTATCTGACAACACTTaGACTTCCGTACACAGTCTT +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCLSDNT*TSVHSL
Trigger: AAGACTGTGTACGGAAGTTCAAGTGTTGTCAGATAA...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGTCTTCTATGCTTATCTaGCAACACTTGAACTTCCGT +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLSSMLI*QHLNFR
Trigger: ACGGAAGTTCAAGTGTTGTCAGATAAGCATAGAAGA...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGTTGGTAAAATACACTTaGAAACCATATGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQLVKYT*KPYATH
Trigger: GTGGGTTGCATATGGTTTTCAAGTGTATTTTACCAA...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGTTTGATTGCTCTCAATaGGAGCTTTGCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAFDCSQ*ELCTHC
Trigger: ACAGTGAGTGCAAAGCTCTCATTGAGAGCAATCAAA...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGTTAAACGTGGCTACTTaGAGTAGAGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLLNVAT*SRDRYP
Trigger: TGGATATCTGTCTCTACTTCAAGTAGCCACGTTTAA...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGATGTTTGTCATTTCTTaGCTCTGGTCATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRMFVIS*LWSSVS
Trigger: GGAAACCGATGACCAGAGTCAAGAAATGACAAACAT...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATAAACATGCAGCAGTaGCAGCTTCAAACTATAATG +
Preference number: 4 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQINMQQ*QLQTIM
Trigger: CATTATAGTTTGAAGCTGTCACTGCTGCATGTTTAT...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 4 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGGCAGTGAAGGCAACTTaGCTAAGAACTCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVAVKAT*LRTHFL
Trigger: AAGAAAGTGAGTTCTTAGTCAAGTTGCCTTCACTGC...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR TCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTTTGTATTCAAGAAGGTaGATAGGCTTTTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLLYSRR*IGFCPS
Trigger: GGAAGGACAAAAGCCTATTCACCTTCTTGAATACAA...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR GCA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAACTTAGCTTTCTCTTCTaGAATGCGTTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQLSFLF*NALFNS
Trigger: GCTATTGAACAACGCATTGCAGAAGAGAAAGCTAAG...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGTTGCCCATGAACAACTaGAATCCTATTAGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGLPMNN*NPISAN
Trigger: GTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAACAGTCCACAGCGCTATaGATCTTCCCATTCATGGGC +
Preference number: 4 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKQSTAL*IFPFMG
Trigger: GCCCATGAATGGGAAGATGCATAGCGCTGTGGACTG...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR GCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR GCA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCTGCATCCTAGTCCTTaGTTCTTATTTTGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLLHPSP*FLFCEV
Trigger: CACTTCACAAAATAAGAAGCAAGGACTAGGATGCAG...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGCAGCATTTTCCTGCATaGATTTCACCAACACACTAC +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAQHFPA*ISPTHY
Trigger: GTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTG...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGATGCTCAGTAAGGACTaGTGTGGAGAAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGMLSKD*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGTCCTTACTGAGCAT...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCCTTCAAGTTCTTCCATaGTGTTGGTCAAAATACTGG +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFLQVLP*CWSKYW
Trigger: CCAGTATTTTGACCAACACCATGGAAGAACTTGAAG...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
CDS-3UTR CCA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCCTTCAAGTTCTTCCATaGTGTTGGTCAAAATACTGG +
Preference number: 4 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSLQVLP*CWSKYW
Trigger: CCAGTATTTTGACCAACACCATGGAAGAACTTGAAG...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
CDS-3UTR CCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTGCAGCTTCCTCTCAGTaGTTTTGCTATGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVAASSQ*FCYGKE
Trigger: CTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGC...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GGCTTTTGTCCTTCCTTAATTCCCGCGCTGGAGGATGCCTCACCAGTTCTCTGCGCTCAGAATCTTATTTaGCACCTACAAGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: GFCPSLIPALEDASPVLCAQNLI*HLQVTC
Trigger: GCAGGTGACTTGTAGGTGCCAAATAAGATTCTGAGC...GCAGAGAACTGGTGAGGCATCCTCCAGCGCGGGAATTAAGGAAGGACAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR CCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGGTTGCATTTAGCTTCTaGGTAAAAGTGGTGGCACGA +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRVAFSF*VKVVAR
Trigger: TCGTGCCACCACTTTTACCCAGAAGCTAAATGCAAC...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674133.1
CDS-3UTR TCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCACCATTCCCATCCAATaGATTGTTAAAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAATIPIQ*IVKEGS
Trigger: ACTTCCTTCTTTAACAATTCATTGGATGGGAATGGT...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAACCATTCCCATCCAATaGATTGTTAAAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRTIPIQ*IVKEGS
Trigger: ACTTCCTTCTTTAACAATTCATTGGATGGGAATGGT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTACACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTGGTAAAATACACTTaGAAACCATATGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAALVKYT*KPYATH
Trigger: GTGGGTTGCATATGGTTTTCAAGTGTATTTTACCAA...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACTCACTGTAGTTGTTaGCCACGCTTACATCAAACA +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISTHCSC*PRLHQT
Trigger: TGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGT...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGTTAAACGTGGCTACTTaGAGTAGAGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGLNVAT*SRDRYP
Trigger: TGGATATCTGTCTCTACTTCAAGTAGCCACGTTTAA...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAATGTTTGTCATTTCTTaGCTCTGGTCATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISMFVIS*LWSSVS
Trigger: GGAAACCGATGACCAGAGTCAAGAAATGACAAACAT...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCGGTTTTCTCTGGAGTTaGATTCTCATTCAGTTTATC +
Preference number: 4 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSGFLWS*ILIQFI
Trigger: GATAAACTGAATGAGAATTCAACTCCAGAGAAAACC...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGTGCTGGGACTGTGAATaGCAATGTAATGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSCWDCE*QCNGMC
Trigger: ACACATACCATTACATTGTCATTCACAGTCCCAGCA...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTATAAACATGCAGCAGTaGCAGCTTCAAACTATAATG +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLINMQQ*QLQTIM
Trigger: CATTATAGTTTGAAGCTGTCACTGCTGCATGTTTAT...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGGCAGTGAAGGCAACTTaGCTAAGAACTCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: FKRFTWRDREEQATGSWGAVKAT*LRTHFL
Trigger: AAGAAAGTGAGTTCTTAGTCAAGTTGCCTTCACTGC...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCCCTTGCATAAGAAAGTaGCCTGTAGAATCTTTTACA +
Preference number: 4 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFPCIRK*PVESFT
Trigger: TGTAAAAGATTCTACAGGGCACTTTCTTATGCAAGG...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGCTTAGCTTTCTCTTCTaGAATGCGTTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRLSFLF*NALFNS
Trigger: GCTATTGAACAACGCATTGCAGAAGAGAAAGCTAAG...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTCATCATCCTCATCCTTaGGTTCCTGTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVHHPHP*VPVWVS
Trigger: AGAGACCCAAACAGGAACGCAAGGATGAGGATGATG...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAATTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp CAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGAGGGACAGGGAGAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QGAEGQTIFKRFTWRDRERANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...CTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR GCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTTCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR GCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCTCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR GCA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR GCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGACCAGAGTTTCCCTTTaGCTTCTTCTATGCTTATCT +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSATRVSL*LLLCLS
Trigger: AGATAAGCATAGAAGAAGGCAAAGGGAAACTCTGGT...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTACAATGGTAAAACTTaGCAGCAAAGAGATTCACTC +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAYNGKT*QQRDSL
Trigger: GAGTGAATCTCTTTGCTGGCAAGTTTTACCATTGTA...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGCTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGLFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAATCCTCTCAGTGGTTTTaGTATGGCAAGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKSSQWF*YGKERK
Trigger: CTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGA...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGAGGGACGTGTATGCTTaGTCTCTTTTGCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: FKRFTWRDREEQATGSWGRDVYA*SLLLSF
Trigger: GAATGAAAGCAAAAGAGAGCAAGCATACACGTCCCT...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAGGATGGGGAGCACCCTaGAGGCACGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTGWGAP*RHGWPG
Trigger: GCCAGGCCAGCCGTGCCTCCAGGGTGCTCCCCATCC...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR CCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR CCA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCAGTTCTAGTGCCATATaGGTCAATAAGATCTATCTG +
Preference number: 4 (lower is better)
Translates to: FNLRLFSLGGSSNINRAASSSAI*VNKIYL
Trigger: CAGATAGATCTTATTGACCCATATGGCACTAGAACT...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATAACTTCACTACCTaGTTTTGTGGGAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQYNFTT*FCGRGK
Trigger: TTTTCCTCTCCCACAAAACCAGGTAGTGAAGTTATA...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCTATAACTTCACTACCTaGTTTTGTGGGAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCYNFTT*FCGRGK
Trigger: TTTTCCTCTCCCACAAAACCAGGTAGTGAAGTTATA...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 4 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGGCAGCTTCCTCTCAGTaGTTTTGCTATGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKAASSQ*FCYGKE
Trigger: CTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGC...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
CDS-3UTR CCA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGATGCTCAGTAAGGACTaGAAAAGCCACAGACATTCA +
Preference number: 4 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSMLSKD*KSHRHS
Trigger: TGAATGTCTGTGGCTTTTCCAGTCCTTACTGAGCAT...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR TCA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGACCATTCCCATCCAATaGATTGTTAAAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRTIPIQ*IVKEGS
Trigger: ACTTCCTTCTTTAACAATTCATTGGATGGGAATGGT...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCACGGCTGGCCTGGCTaGCATTGCTGTGGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIHGWPG*HCCGAV
Trigger: AACGGCGCCACAGCAATGTCAGCCAGGCCAGCCGTG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp AGTTTGTGGTCCCAGCTCTGTCTTGTCTGTAGACTAGGCTGGCAGTCCCATCCACAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SLWSQLCLVCRLGWQSHPQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...TGGATGGGACTGCCAGCCTAGTCTACAGACAAGACAGAGCTGGGACCACAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR TCA 90 bp ACTAGGCTGGCAGTCCCATCCATTGTGACTACTACATCTATTTGGGTGGAGCCAGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: TRLAVPSIVTTTSIWVEPAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...TGGCTCCACCCAAATAGATGTAGTAGTCACAATGGATGGGACTGCCAGCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR TCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGTTGGTAAAATACACTTaGAAACCATATGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVLVKYT*KPYATH
Trigger: GTGGGTTGCATATGGTTTTCAAGTGTATTTTACCAA...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGTTAAACGTGGCTACTTaGAGTAGAGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSLNVAT*SRDRYP
Trigger: TGGATATCTGTCTCTACTTCAAGTAGCCACGTTTAA...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGTTTATTTTGGCATTCTaGGATCCAGACTGCTACACA +
Preference number: 4 (lower is better)
Translates to: FKRFTWRDREEQATGSWGFILAF*DPDCYT
Trigger: TGTGTAGCAGTCTGGATCTCAGAATGCCAAAATAAA...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR TCA 90 bp ACTAGGCTGGCAGTCCCATCCATTGTGACTACTACATCTATTTGGGTGGAGCCACCTATCTTCAACCAATaGAGGGTCTCTTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: TRLAVPSIVTTTSIWVEPPIFNQ*RVSCHR
Trigger: ACGATGGCAAGAGACCCTTCATTGGTTGAAGATAGG...TGGCTCCACCCAAATAGATGTAGTAGTCACAATGGATGGGACTGCCAGCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR GCA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGCTTAGCTTTCTCTTCTaGAATGCGTTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSLSFLF*NALFNS
Trigger: GCTATTGAACAACGCATTGCAGAAGAGAAAGCTAAG...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGTTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRLSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKRANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
CDS-3UTR GCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: FKRFTWRDREEQATGSWGILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGACCAGAGTTTCCCTTTaGCTTCTTCTATGCTTATCT +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRTRVSL*LLLCLS
Trigger: AGATAAGCATAGAAGAAGGCAAAGGGAAACTCTGGT...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGCTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSLFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRLFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGAGTAAGTTGTCCTACTaGAATCAAGCGCACAATATT +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVSKLSY*NQAHNI
Trigger: AATATTGTGCGCTTGATTGCAGTAGGACAACTTACT...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 4 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAACAAGCTACTGGCAGCTaGGGGGAAGAGGGAGTGCAA +
Preference number: 4 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKQATGS*GEEGVQ
Trigger: TTGCACTCCCTCTTCCCCCCAGCTGCCAGTAGCTTG...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGGGCAGGGGTGGCACTaGATCGAGAGATTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAGQGWH*IERLLS
Trigger: GGAAAGCAATCTCTCGATTCAGTGCCACCCCTGCCC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGGGGCAGGGGTGGCACTaGATCGAGAGATTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLGQGWH*IERLLS
Trigger: GGAAAGCAATCTCTCGATTCAGTGCCACCCCTGCCC...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAATAAACATGCAGCAGTaGCAGCTTCAAACTATAATG +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISINMQQ*QLQTIM
Trigger: CATTATAGTTTGAAGCTGTCACTGCTGCATGTTTAT...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGCTTAGCTTTCTGTTCTaGCAGTCATTCGATGGTACC +
Preference number: 4 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKLSFLF*QSFDGT
Trigger: GGTACCATCGAATGACTGTCAGAACAGAAAGCTAAG...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636384.2
CDS-3UTR GCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGACTGAATCGAGAGATTaGTTTCCCTTTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSATESRD*FPFIQY
Trigger: GTATTGAATAAAGGGAAAGCAATCTCTCGATTCAGT...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGTTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRLSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCCCTCTGGTAGGAGCTaGCCAGCAGATGTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAPSGRS*PADVRV
Trigger: TACCCTCACATCTGCTGGGCAGCTCCTACCAGAGGG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCATACAATGGTAAAACTTaGCAGCAAAGAGATTCACTC +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISYNGKT*QQRDSL
Trigger: GAGTGAATCTCTTTGCTGGCAAGTTTTACCATTGTA...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTTACTTTACAGATGTaGTCAGCAATATACCAACTT +
Preference number: 4 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVLTLQM*SAIYQL
Trigger: AAGTTGGTATATTGCTGAGCACATCTGTAAAGTAAG...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAGAGGCACGGCTGGCCTaGCTGACATTGCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTEARLA*LTLLWR
Trigger: GCGCCACAGCAATGTCAGCCAGGCCAGCCGTGCCTC...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR CCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGACGAGGGTGGAGACGTaGTGGAAGGCGTCATATCGG +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLTRVET*WKASYR
Trigger: CCGATATGACGCCTTCCACCACGTCTCCACCCTCGT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 4 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 4 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGTTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 4 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGTTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 4 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAAGTTCTAGTGCCATATaGGTCAATAAGATCTATCTG +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISSSSAI*VNKIYL
Trigger: CAGATAGATCTTATTGACCCATATGGCACTAGAACT...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGTATAACTTCACTACCTaGTTTTGTGGGAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSYNFTT*FCGRGK
Trigger: TTTTCCTCTCCCACAAAACCAGGTAGTGAAGTTATA...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 4 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGCCAAAGTCTTTATTTTaGCATTCTGAGATCCAGACT +
Preference number: 4 (lower is better)
Translates to: FKRFTWRDREEQATGSWGPKSLF*HSEIQT
Trigger: AGTCTGGATCTCAGAATGCCAAAATAAAGACTTTGG...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CCA 90 bp AGTTTGTGGTCCCAGCTCTGTCTTGTCTGTAGACTAGGCTGGCAGTCCCATCCAACTACTACATCTATTTaGGTGGAGCCACATCTGATA +
Preference number: 4 (lower is better)
Translates to: SLWSQLCLVCRLGWQSHPTTTSI*VEPHLI
Trigger: TATCAGATGTGGCTCCACCCAAATAGATGTAGTAGT...TGGATGGGACTGCCAGCCTAGTCTACAGACAAGACAGAGCTGGGACCACAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR TCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGTTCGTAGGTTGCCCATaGACAACTGCAATCCTATTA +
Preference number: 4 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKFVGCP*TTAILL
Trigger: TAATAGGATTGCAGTTGTTCATGGGCAACCTACGAA...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACACACTGGCCTGCATCTaGGCTGTTGCCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNTLACI*AVATKQ
Trigger: CTGCTTTGTGGCAACAGCTCAGATGCAGGCCAGTGT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGTTGCCCATGAACAACTaGAATCCTATTAGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKLPMNN*NPISAN
Trigger: GTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATTCAGCAGATGCGGCTaGAGCTGCCGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEFSRCG*SCRLSF
Trigger: GAAGCTCAGGCGGCAGCTGCAGCCGCATCTGCTGAA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATGCTCAGTAAGGACTaGTGTGGAGAAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKMLSKD*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGTCCTTACTGAGCAT...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
CDS-3UTR CCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CCA 90 bp TTCAAAAGATTTACCTGGAGGGACAGGGAGGAGCAAGCTACTGGCAGCTGGGGGAACACATTTAACATATaGCAGAGCCAGAAATTGATC +
Preference number: 4 (lower is better)
Translates to: FKRFTWRDREEQATGSWGNTFNI*QSQKLI
Trigger: GATCAATTTCTGGCTCTGCCATATGTTAAATGTGTT...CCCCCAGCTGCCAGTAGCTTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
3UTR CAA 72 bp ATGGCTCATAAAAATCCTGGTCTGGGAAACAGTAGTTaGTGGTCCCAGCTCTGTCTTGTCTGTAGACTAGGC +
Preference number: 4 (lower is better)
Translates to: MAHKNPGLGNSS*WSQLCLVCRLG
Trigger: GCCTAGTCTACAGACAAGACAGAGCTGGGACCACAAACTACTGTTTCCCAGACCAGGATTTTTATGAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGGGCAGGGGTGGCACTaGATCGAGAGATTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHGQGWH*IERLLS
Trigger: GGAAAGCAATCTCTCGATTCAGTGCCACCCCTGCCC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNTTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTCCCACCAGCACCACTaGAGTCTCTTGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLSHQHH*SLLIQQ
Trigger: CTGCTGAATCAAGAGACTTCAGTGGTGCTGGTGGGA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTCCCACCAGCACCACTaGAGTCTCTTGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIASHQHH*SLLIQQ
Trigger: CTGCTGAATCAAGAGACTTCAGTGGTGCTGGTGGGA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TCACAAATGCAGGTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATTGGTCTCCCACCAGCACCACTaGAGTCTCTTGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SQMQVQMSASKRLLGSLVSHQHH*SLLIQQ
Trigger: CTGCTGAATCAAGAGACTTCAGTGGTGCTGGTGGGA...GACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAAGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 4 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR TCA 90 bp TGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTAAAAACAAGAAAGGATaGCCACAGCATCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: WFCYGKERKARQSSKDLPKNKKG*PQHPPS
Trigger: GGAGGGAGGATGCTGTGGTCATCCTTTCTTGTTTTT...AGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR TCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGAAATGCAGGTTCAAATaGGTGCTTCCAAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKKCRFK*VLPKDF
Trigger: GAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTT...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCAGTCCACAGCGCTATaGATCTTCCCATTCATGGGC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLQSTAL*IFPFMG
Trigger: GCCCATGAATGGGAAGATGCATAGCGCTGTGGACTG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCAGTCCACAGCGCTATaGATCTTCCCATTCATGGGC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNQSTAL*IFPFMG
Trigger: GCCCATGAATGGGAAGATGCATAGCGCTGTGGACTG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCAGTCCACAGCGCTATaGATCTTCCCATTCATGGGC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAQSTAL*IFPFMG
Trigger: GCCCATGAATGGGAAGATGCATAGCGCTGTGGACTG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCCCTCTGGTAGGAGCTaGCCAGCAGATGTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHPSGRS*PADVRV
Trigger: TACCCTCACATCTGCTGGGCAGCTCCTACCAGAGGG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACCCTCTGGTAGGAGCTaGCCAGCAGATGTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEPSGRS*PADVRV
Trigger: TACCCTCACATCTGCTGGGCAGCTCCTACCAGAGGG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCCCTCTGGTAGGAGCTaGCCAGCAGATGTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIPSGRS*PADVRV
Trigger: TACCCTCACATCTGCTGGGCAGCTCCTACCAGAGGG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAAATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR GCA 90 bp TCACAAATGCAGGTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATTGGTCGCCTCACCAGTTCTCTaGCTGTCTCACAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: SQMQVQMSASKRLLGSLVASPVL*LSHKCR
Trigger: CCTGCATTTGTGAGACAGGCAGAGAACTGGTGAGGC...GACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR CCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAATATCCTTCAGGACACTaGCCTGCATCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKYPSGH*PASELL
Trigger: CAACAGCTCAGATGCAGGCCAGTGTCCTGAAGGATA...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAGCATCTTCCCATTCATaGGCAGGATGGGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVASSHS*AGWGAP
Trigger: GGGTGCTCCCCATCCTGCCCATGAATGGGAAGATGC...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp AACAGTAGTTTGTGGTCCCAGCTCTGTCTTGTCTGTAGACTAGGCTGGCAGTCCATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NSSLWSQLCLVCRLGWQSISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...GGACTGCCAGCCTAGTCTACAGACAAGACAGAGCTGGGACCACAAACTACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAACGAGGGTGGAGACGTaGTGGAAGGCGTCATATCGG +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHATRVET*WKASYR
Trigger: CCGATATGACGCCTTCCACCACGTCTCCACCCTCGT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAACGAGGGTGGAGACGTaGTGGAAGGCGTCATATCGG +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEETRVET*WKASYR
Trigger: CCGATATGACGCCTTCCACCACGTCTCCACCCTCGT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCACGAGGGTGGAGACGTaGTGGAAGGCGTCATATCGG +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYITRVET*WKASYR
Trigger: CCGATATGACGCCTTCCACCACGTCTCCACCCTCGT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGACTATCATACGAGGGTaGAGACGTGGTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLTIIRG*RRGGRR
Trigger: ACGCCTTCCACCACGTCTCCACCCTCGTATGATAGT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACACTATCATACGAGGGTaGAGACGTGGTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNTIIRG*RRGGRR
Trigger: ACGCCTTCCACCACGTCTCCACCCTCGTATGATAGT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTACTATCATACGAGGGTaGAGACGTGGTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIATIIRG*RRGGRR
Trigger: ACGCCTTCCACCACGTCTCCACCCTCGTATGATAGT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTCAGTGGTTTTGCTATaGCAAGGAGCGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNSVVLL*QGAEGQ
Trigger: CTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
3UTR CAA 72 bp GTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATaGGTCCATTACACGGTCAGGCCCATCCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: VQMSASKRLLGS*VHYTVRPIQHL
Trigger: AAGATGCTGGATGGGCCTGACCGTGTAATGGACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAACACTGGCCTGCATCTaGGCTGTTGCCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVTLACI*AVATKQ
Trigger: CTGCTTTGTGGCAACAGCTCAGATGCAGGCCAGTGT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACACACTGGCCTGCATCTaGGCTGTTGCCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHTLACI*AVATKQ
Trigger: CTGCTTTGTGGCAACAGCTCAGATGCAGGCCAGTGT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCACACTGGCCTGCATCTaGGCTGTTGCCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYITLACI*AVATKQ
Trigger: CTGCTTTGTGGCAACAGCTCAGATGCAGGCCAGTGT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGCTGCAGCTGCCGCCTaGGCTTCTTCTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAAAAAA*ASSCCF
Trigger: AAAGCAACAAGAAGAAGCTCAGGCGGCAGCTGCAGC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFTTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTGGTTCCTATCGTCTaGGTAGCCATTACGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLVPIV*VAITPL
Trigger: CAGAGGCGTAATGGCTACTCAGACGATAGGAACCAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAATTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKLSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR GCA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGTTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKLSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000637367.1
CDS-3UTR GCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCCTGCATCTGAGCTGTTaGCACAAAGCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: NESFALTVVVDHAYIKHLLHLSC*HKAEHH
Trigger: ATGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAG...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTACAGTCCACAGCGCTATaGATCTTCCCATTCATGGGC +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVQSTAL*IFPFMG
Trigger: GCCCATGAATGGGAAGATGCATAGCGCTGTGGACTG...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTATCCTTCAGGACACTaGCCTGCATCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLYPSGH*PASELL
Trigger: CAACAGCTCAGATGCAGGCCAGTGTCCTGAAGGATA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTATCCTTCAGGACACTaGCCTGCATCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAYPSGH*PASELL
Trigger: CAACAGCTCAGATGCAGGCCAGTGTCCTGAAGGATA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTATCCTTCAGGACACTaGCCTGCATCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNYPSGH*PASELL
Trigger: CAACAGCTCAGATGCAGGCCAGTGTCCTGAAGGATA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATGGCTGACATTGCTGTaGCGCCGTTCTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAWLTLL*RRSPCL
Trigger: CAGACATGGAGAACGGCGCCACAGCAATGTCAGCCA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAGGGTGGAGACGTGGTaGAAGGCGTCATATCGGTTT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVRVETW*KASYRF
Trigger: AAACCGATATGACGCCTTCCACCACGTCTCCACCCT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCTCAGTGGTTTTGCTATaGCAAGGAGCGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFSVVLL*QGAEGQ
Trigger: CTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGA...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CCA 90 bp CTGGCAGTCCCATCCATTGTGACTACTACATCTATTTGGGTGGAGCCACATCTGATAAAAATCCTGGTCTaGGAAACAGTAGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LAVPSIVTTTSIWVEPHLIKILV*ETVVCG
Trigger: ACCACAAACTACTGTTTCCCAGACCAGGATTTTTAT...CAGATGTGGCTCCACCCAAATAGATGTAGTAGTCACAATGGATGGGACTGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHATTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHTTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAACCACTGAAGTCTCTTaGTTCAGCAGATGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEETTEVS*FSRCGC
Trigger: GCAGCCGCATCTGCTGAATCAAGAGACTTCAGTGGT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATCCCACCAGCACCACTaGAGTCTCTTGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHASHQHH*SLLIQQ
Trigger: CTGCTGAATCAAGAGACTTCAGTGGTGCTGGTGGGA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATCCCACCAGCACCACTaGAGTCTCTTGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEESHQHH*SLLIQQ
Trigger: CTGCTGAATCAAGAGACTTCAGTGGTGCTGGTGGGA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAGAACCTTCACTTAGGGAGAGAGGAAGTTGTCTTCTCTGCTTCTAGAACTATCCAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: QNLHLGREEVVFSASRTIQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...GATAGTTCTAGAAGCAGAGAAGACAACTTCCTCTCTCCCTAAGTGAAGGTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673831.1
ENST00000673883.1
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATTGGTTCCTATCGTCTaGGTAGCCATTACGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVLVPIV*VAITPL
Trigger: CAGAGGCGTAATGGCTACTCAGACGATAGGAACCAA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TCACAAATGCAGGTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATTGGTCGGCAGAGCCAGAAATTaGTCACAGATTAAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SQMQVQMSASKRLLGSLVGRARN*SQIKLS
Trigger: GGACAGCTTAATCTGTGATCAATTTCTGGCTCTGCC...GACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCATCATCCTCATCCTTaGGTTCCTGTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLHHPHP*VPVWVS
Trigger: AGAGACCCAAACAGGAACGCAAGGATGAGGATGATG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCATCATCCTCATCCTTaGGTTCCTGTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAHHPHP*VPVWVS
Trigger: AGAGACCCAAACAGGAACGCAAGGATGAGGATGATG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCATCATCCTCATCCTTaGGTTCCTGTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNHHPHP*VPVWVS
Trigger: AGAGACCCAAACAGGAACGCAAGGATGAGGATGATG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAAACTGAATCGAGAGATTaGTTTCCCTTTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKTESRD*FPFIQY
Trigger: GTATTGAATAAAGGGAAAGCAATCTCTCGATTCAGT...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCTGCATCTGAGCTGTTaGCACAAAGCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALHLSC*HKAEHH
Trigger: ATGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNRANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLRANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIARANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCACAGTCCACAGCGCTATaGATCTTCCCATTCATGGGC +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAQSTAL*IFPFMG
Trigger: GCCCATGAATGGGAAGATGCATAGCGCTGTGGACTG...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACAGTCCACAGCGCTATaGATCTTCCCATTCATGGGC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVQSTAL*IFPFMG
Trigger: GCCCATGAATGGGAAGATGCATAGCGCTGTGGACTG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NESFALTVVVDHAYIKHLSRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTTGGGATTGATAAGCTaGCACCAAGAAGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALGLIS*HQEDCS
Trigger: GCTGCAGTCTTCTTGGTGCCAGCTTATCAATCCCAA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283256.10
ENST00000636662.2
CDS-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATATCCTTCAGGACACTaGCCTGCATCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVYPSGH*PASELL
Trigger: CAACAGCTCAGATGCAGGCCAGTGTCCTGAAGGATA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAAGGGTGGAGACGTGGTaGAAGGCGTCATATCGGTTT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEERVETW*KASYRF
Trigger: AAACCGATATGACGCCTTCCACCACGTCTCCACCCT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAGGGTGGAGACGTGGTaGAAGGCGTCATATCGGTTT +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIRVETW*KASYRF
Trigger: AAACCGATATGACGCCTTCCACCACGTCTCCACCCT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAAGGGTGGAGACGTGGTaGAAGGCGTCATATCGGTTT +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHARVETW*KASYRF
Trigger: AAACCGATATGACGCCTTCCACCACGTCTCCACCCT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTAGGGTGGAGACGTGGTaGAAGGCGTCATATCGGTTT +
Preference number: 4 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSRVETW*KASYRF
Trigger: AAACCGATATGACGCCTTCCACCACGTCTCCACCCT...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
CDS-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAACTATCATACGAGGGTaGAGACGTGGTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEETIIRG*RRGGRR
Trigger: ACGCCTTCCACCACGTCTCCACCCTCGTATGATAGT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCGCAGCTTCCTCTCAGTaGTTTTGCTATGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFAASSQ*FCYGKE
Trigger: CTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGC...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAAAAGTGAGTGCTGCATaGCTGGGAAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAKVSAA*LGRPQE
Trigger: TTCCTGAGGCCTTCCCAGCCATGCAGCACTCACTTT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636071.2
3UTR CAA 72 bp CATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGTCTTGTTATAGGCACT +
Preference number: 4 (lower is better)
Translates to: HRYYFSSLLSSS*LTRGLCLVIGT
Trigger: AGTGCCTATAACAAGACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACACAGACAGTACACTGCTaGACTGCTCCGTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTQTVHC*TAPSWD
Trigger: ATCCCATGACGGAGCAGTTCAGCAGTGTACTGTCTG...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCTTTGATTGCTCTCAATaGGAGCTTTGCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: NESFALTVVVDHAYIKHLFDCSQ*ELCTHC
Trigger: ACAGTGAGTGCAAAGCTCTCATTGAGAGCAATCAAA...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCTTAGCTTTCTGTTCTaGCAGTCATTCGATGGTACC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLLSFLF*QSFDGT
Trigger: GGTACCATCGAATGACTGTCAGAACAGAAAGCTAAG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375437.7
ENST00000636384.2
CDS-3UTR TCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAAAAACAAGAAAGGATaGCCACAGCATCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVKNKKG*PQHPPS
Trigger: GGAGGGAGGATGCTGTGGTCATCCTTTCTTGTTTTT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000375437.7
ENST00000636071.2
ENST00000636384.2
ENST00000636985.2
CDS-3UTR TCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCCCTTGCATAAGAAAGTaGAGATTCCTTCCCCATAGT +
Preference number: 4 (lower is better)
Translates to: NESFALTVVVDHAYIKHLPCIRK*RFLPHS
Trigger: ACTATGGGGAAGGAATCTTCACTTTCTTATGCAAGG...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACCTTGCATAAGAAAGTaGGTGCTGCATGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVPCIRK*VLHGWE
Trigger: TTCCCAGCCATGCAGCACTCACTTTCTTATGCAAGG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636071.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTGGTCTATGCCATCCTaGTATGTTCACACTAGAGGT +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLWSMPS*YVHTRG
Trigger: ACCTCTAGTGTGAACATATCAGGATGGCATAGACCA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637266.2
CDS-3UTR GCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAATGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTACTGCATCTGAGCTGTTaGCACAAAGCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVLHLSC*HKAEHH
Trigger: ATGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAG...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCCTGCATCTGAGCTGTTaGCACAAAGCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFLHLSC*HKAEHH
Trigger: ATGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAG...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNSRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIASRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCTCCTTCTCTACTTCCTaGTTTAGGGAGCAGACATGC +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFSFSTS*FREQTC
Trigger: GCATGTCTGCTCCCTAAAGCAGGAAGTAGAGAAGGA...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAAGCAGGTTCAAATGAGTaGTTCCAAAAGACTTCTAGG +
Preference number: 4 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKAGSNE*FQKTSR
Trigger: CCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGC...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAAAGAAAGGGACGTGTATaGTTGCTCTCTTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKRKGRV*LLSFAF
Trigger: GAAAGCAAAAGAGAGCAAGCATACACGTCCCTTTCT...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp CAGAACCTTCACTTAGGGAGAGAGGAAGTTGTCTTCTCTGCTTCTAGAACTATCGTCACATTCTTTTTCTaGAGCACCTATCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: QNLHLGREEVVFSASRTIVTFFF*STYLQP
Trigger: TGGTTGAAGATAGGTGCTGCAGAAAAAGAATGTGAC...GATAGTTCTAGAAGCAGAGAAGACAACTTCCTCTCTCCCTAAGTGAAGGTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673831.1
ENST00000673883.1
CDS-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTATCCTTCAGGACACTaGCCTGCATCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIYPSGH*PASELL
Trigger: CAACAGCTCAGATGCAGGCCAGTGTCCTGAAGGATA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTATCCTTCAGGACACTaGCCTGCATCTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHYPSGH*PASELL
Trigger: CAACAGCTCAGATGCAGGCCAGTGTCCTGAAGGATA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAGAACCTTCACTTAGGGAGAGAGGAAGTTGTCTTCTCTGCTTCTAGAACTATCATGCCATTTTGTCTTTaGGACACCACTAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: QNLHLGREEVVFSASRTIMPFCL*DTTRFP
Trigger: TGGAAATCTAGTGGTGTCCCAAAGACAAAATGGCAT...GATAGTTCTAGAAGCAGAGAAGACAACTTCCTCTCTCCCTAAGTGAAGGTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR CCA 90 bp CATCGTGTCTGGAAACTAAGAATGGCTCATAAAAATCCTGGTCTGGGAAACAGTTCTTGCCATCGTGTCTaGAAACTAAGAATGGCTCAT +
Preference number: 4 (lower is better)
Translates to: HRVWKLRMAHKNPGLGNSSCHRV*KLRMAH
Trigger: ATGAGCCATTCTTAGTTTCCAGACACGATGGCAAGA...ACTGTTTCCCAGACCAGGATTTTTATGAGCCATTCTTAGTTTCCAGACACGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTCGTAGGTTGCCCATaGACAACTGCAATCCTATTA +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNFVGCP*TTAILL
Trigger: TAATAGGATTGCAGTTGTTCATGGGCAACCTACGAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TCACAAATGCAGGTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATTGGTCTTCGTAGGTTGCCCATaGACAACTGCAATCCTATTA +
Preference number: 4 (lower is better)
Translates to: SQMQVQMSASKRLLGSLVFVGCP*TTAILL
Trigger: TAATAGGATTGCAGTTGTTCATGGGCAACCTACGAA...GACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAAGATTTTGCCAACTTaGAAACTCGGAGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHKILPT*KLGAAG
Trigger: TCCGGCTGCTCCGAGTTTTCAAGTTGGCAAAATCTT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCTTATCTGACAACACTTaGACTTCCGTACACAGTCTT +
Preference number: 4 (lower is better)
Translates to: NESFALTVVVDHAYIKHLLSDNT*TSVHSL
Trigger: AAGACTGTGTACGGAAGTTCAAGTGTTGTCAGATAA...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACACTCACTGTAGTTGTTaGCCACGCTTACATCAAACA +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNTHCSC*PRLHQT
Trigger: TGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTTTGATTGCTCTCAATaGGAGCTTTGCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLFDCSQ*ELCTHC
Trigger: ACAGTGAGTGCAAAGCTCTCATTGAGAGCAATCAAA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGATGTTTGTCATTTCTTaGCTCTGGTCATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLMFVIS*LWSSVS
Trigger: GGAAACCGATGACCAGAGTCAAGAAATGACAAACAT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTGCTGGGACTGTGAATaGCAATGTAATGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNCWDCE*QCNGMC
Trigger: ACACATACCATTACATTGTCATTCACAGTCCCAGCA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTGCTGGGACTGTGAATaGCAATGTAATGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIACWDCE*QCNGMC
Trigger: ACACATACCATTACATTGTCATTCACAGTCCCAGCA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAAAAACAAGAAAGGATaGCCACAGCATCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIKNKKG*PQHPPS
Trigger: GGAGGGAGGATGCTGTGGTCATCCTTTCTTGTTTTT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375437.7
ENST00000636071.2
ENST00000636384.2
ENST00000636985.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAAAAACAAGAAAGGATaGCCACAGCATCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHKNKKG*PQHPPS
Trigger: GGAGGGAGGATGCTGTGGTCATCCTTTCTTGTTTTT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375437.7
ENST00000636071.2
ENST00000636384.2
ENST00000636985.2
CDS-3UTR TCA 90 bp GAGAGGAAGTTGTCTTCTCTGCTTCTAGAACTATCAGTTTTCAGAAAGTCACATCAGTCCCATCCATTGTaGCTACTACATCTATTTGGG +
Preference number: 4 (lower is better)
Translates to: ERKLSSLLLELSVFRKSHQSHPL*LLHLFG
Trigger: CCCAAATAGATGTAGTAGTCACAATGGATGGGACTG...ATGTGACTTTCTGAAAACTGATAGTTCTAGAAGCAGAGAAGACAACTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACATCATCCTCATCCTTaGGTTCCTGTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVHHPHP*VPVWVS
Trigger: AGAGACCCAAACAGGAACGCAAGGATGAGGATGATG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCATCATCCTCATCCTTaGGTTCCTGTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIHHPHP*VPVWVS
Trigger: AGAGACCCAAACAGGAACGCAAGGATGAGGATGATG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTTGCCCATGAACAACTaGAATCCTATTAGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALPMNN*NPISAN
Trigger: GTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTGCCCATGAACAACTaGAATCCTATTAGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLPMNN*NPISAN
Trigger: GTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTTGCCCATGAACAACTaGAATCCTATTAGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLLPMNN*NPISAN
Trigger: GTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCTGCATCTGAGCTGTTaGCACAAAGCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLHLSC*HKAEHH
Trigger: ATGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACTGCATCTGAGCTGTTaGCACAAAGCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLHLSC*HKAEHH
Trigger: ATGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACTGCATCTGAGCTGTTaGCACAAAGCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEELHLSC*HKAEHH
Trigger: ATGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAGAGCCAATGTCCTTTaGTCGACCTCTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIRANVL*STSEAE
Trigger: TTCAGCTTCAGAGGTCGAGCAAAGGACATTGGCTCT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCACCAGAGTTTCCCTTTaGCTTCTTCTATGCTTATCT +
Preference number: 4 (lower is better)
Translates to: NESFALTVVVDHAYIKHLTRVSL*LLLCLS
Trigger: AGATAAGCATAGAAGAAGGCAAAGGGAAACTCTGGT...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVSRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCAGCATTTTCCTGCATaGATTTCACCAACACACTAC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAQHFPA*ISPTHY
Trigger: GTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCACTGTTTAGCTCCTTaGATAAGAAAGTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLHCLAP*IRKCWS
Trigger: AGACCAGCACTTTCTTATGCAAGGAGCTAAACAGTG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637266.2
CDS-3UTR GCA 90 bp CATCGTGTCTGGAAACTAAGAATGGCTCATAAAAATCCTGGTCTGGGAAACAGTGTCACATTCTTTTTCTaGAGCACCTATCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: HRVWKLRMAHKNPGLGNSVTFFF*STYLQP
Trigger: TGGTTGAAGATAGGTGCTGCAGAAAAAGAATGTGAC...ACTGTTTCCCAGACCAGGATTTTTATGAGCCATTCTTAGTTTCCAGACACGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR CCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGATGCTCAGTAAGGACTaGTGTGGAGAAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLMLSKD*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGTCCTTACTGAGCAT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAGAACCTTCACTTAGGGAGAGAGGAAGTTGTCTTCTCTGCTTCTAGAACTATCATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QNLHLGREEVVFSASRTIISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...GATAGTTCTAGAAGCAGAGAAGACAACTTCCTCTCTCCCTAAGTGAAGGTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673831.1
ENST00000673883.1
CDS-3UTR CCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCTTCAAAAGATTTACCTaGAGGGACAGGGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFFKRFT*RDREEQ
Trigger: TTGCTCCTCCCTGTCCCTCCAGGTAAATCTTTTGAA...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR TCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAGCTTTCCTCCATATCTaGCTCGCTGCTGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTAFLHI*LAAEFF
Trigger: GAAGAATTCAGCAGCGAGTCAGATATGGAGGAAAGC...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000673831.1
ENST00000673883.1
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTTATCTGACAACACTTaGACTTCCGTACACAGTCTT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALSDNT*TSVHSL
Trigger: AAGACTGTGTACGGAAGTTCAAGTGTTGTCAGATAA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTATCTGACAACACTTaGACTTCCGTACACAGTCTT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLSDNT*TSVHSL
Trigger: AAGACTGTGTACGGAAGTTCAAGTGTTGTCAGATAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTCTTCTATGCTTATCTaGCAACACTTGAACTTCCGT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIASSMLI*QHLNFR
Trigger: ACGGAAGTTCAAGTGTTGTCAGATAAGCATAGAAGA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAACTCACTGTAGTTGTTaGCCACGCTTACATCAAACA +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVTHCSC*PRLHQT
Trigger: TGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCACTCACTGTAGTTGTTaGCCACGCTTACATCAAACA +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFTHCSC*PRLHQT
Trigger: TGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGT...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR TCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATTTGATTGCTCTCAATaGGAGCTTTGCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVFDCSQ*ELCTHC
Trigger: ACAGTGAGTGCAAAGCTCTCATTGAGAGCAATCAAA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTTAAACGTGGCTACTTaGAGTAGAGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALNVAT*SRDRYP
Trigger: TGGATATCTGTCTCTACTTCAAGTAGCCACGTTTAA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGAAATGCAGGTTCAAATaGGTGCTTCCAAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLKCRFK*VLPKDF
Trigger: GAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000636985.2
CDS-3UTR TCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCATACTGACTTGTCTGTaGTGTACACAGTCGTCTACA +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFILTCL*CTQSST
Trigger: TGTAGACGACTGTGTACATCACAGACAAGTCAGTAT...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR TCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACACCTATCTTCAACCAATaGAGGGTCTCTTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTPIFNQ*RVSCHR
Trigger: ACGATGGCAAGAGACCCTTCATTGGTTGAAGATAGG...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673831.1
ENST00000673883.1
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCTTAGCTTTCTCTTCTaGAATGCGTTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALSFLF*NALFNS
Trigger: GCTATTGAACAACGCATTGCAGAAGAGAAAGCTAAG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCTTAGCTTTCTCTTCTaGAATGCGTTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLSFLF*NALFNS
Trigger: GCTATTGAACAACGCATTGCAGAAGAGAAAGCTAAG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATTGCCCATGAACAACTaGAATCCTATTAGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVLPMNN*NPISAN
Trigger: GTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTAGGGAGAGAGGAAGTTGTCTTCTCTGCTTCTAGAACTATCAGTTTTCAGAAAAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: LGREEVVFSASRTISFQKKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...TTTCTGAAAACTGATAGTTCTAGAAGCAGAGAAGACAACTTCCTCTCTCCCTAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000673831.1
ENST00000673883.1
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGACCAGAGTTTCCCTTTaGCTTCTTCTATGCTTATCT +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLTRVSL*LLLCLS
Trigger: AGATAAGCATAGAAGAAGGCAAAGGGAAACTCTGGT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLLFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCTGCATCCTAGTCCTTaGTTCTTATTTTGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLLHPSP*FLFCEV
Trigger: CACTTCACAAAATAAGAAGCAAGGACTAGGATGCAG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYISRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTTTATTAACTGTCTTCTaGATGCCAAATACATCAGTG +
Preference number: 4 (lower is better)
Translates to: WFCYGKERKARQSSKDLPLLTVF*MPNTSV
Trigger: CACTGATGTATTTGGCATGCAGAAGACAGTTAATAA...AGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTACACCTACAAGTCACCTaGTATTATTCCTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVHLQVT*YYSFCG
Trigger: TCCACAGAAGGAATAATAGCAGGTGACTTGTAGGTG...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGCTCAGTAAGGACTaGTGTGGAGAAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVMLSKD*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGTCCTTACTGAGCAT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCATGCTCAGTAAGGACTaGTGTGGAGAAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFMLSKD*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGTCCTTACTGAGCAT...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCTTCAAGTTCTTCCATaGTGTTGGTCAAAATACTGG +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLQVLP*CWSKYW
Trigger: CCAGTATTTTGACCAACACCATGGAAGAACTTGAAG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636662.2
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCTTCAAGTTCTTCCATaGTGTTGGTCAAAATACTGG +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALQVLP*CWSKYW
Trigger: CCAGTATTTTGACCAACACCATGGAAGAACTTGAAG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636662.2
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATTCGTAGGTTGCCCATaGACAACTGCAATCCTATTA +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEFVGCP*TTAILL
Trigger: TAATAGGATTGCAGTTGTTCATGGGCAACCTACGAA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTCGTAGGTTGCCCATaGACAACTGCAATCCTATTA +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVFVGCP*TTAILL
Trigger: TAATAGGATTGCAGTTGTTCATGGGCAACCTACGAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTACCATTCCCATCCAATaGATTGTTAAAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIATIPIQ*IVKEGS
Trigger: ACTTCCTTCTTTAACAATTCATTGGATGGGAATGGT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTGGTAAAATACACTTaGAAACCATATGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLVKYT*KPYATH
Trigger: GTGGGTTGCATATGGTTTTCAAGTGTATTTTACCAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTTGGTAAAATACACTTaGAAACCATATGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIALVKYT*KPYATH
Trigger: GTGGGTTGCATATGGTTTTCAAGTGTATTTTACCAA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCACTCACTGTAGTTGTTaGCCACGCTTACATCAAACA +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYITHCSC*PRLHQT
Trigger: TGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAACTCACTGTAGTTGTTaGCCACGCTTACATCAAACA +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHATHCSC*PRLHQT
Trigger: TGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAACTCACTGTAGTTGTTaGCCACGCTTACATCAAACA +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVTHCSC*PRLHQT
Trigger: TGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTTGATTGCTCTCAATaGGAGCTTTGCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVFDCSQ*ELCTHC
Trigger: ACAGTGAGTGCAAAGCTCTCATTGAGAGCAATCAAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACATGTTTGTCATTTCTTaGCTCTGGTCATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHMFVIS*LWSSVS
Trigger: GGAAACCGATGACCAGAGTCAAGAAATGACAAACAT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCATGTTTGTCATTTCTTaGCTCTGGTCATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIMFVIS*LWSSVS
Trigger: GGAAACCGATGACCAGAGTCAAGAAATGACAAACAT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAATGTTTGTCATTTCTTaGCTCTGGTCATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEMFVIS*LWSSVS
Trigger: GGAAACCGATGACCAGAGTCAAGAAATGACAAACAT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGGTTTTCTCTGGAGTTaGATTCTCATTCAGTTTATC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAGFLWS*ILIQFI
Trigger: GATAAACTGAATGAGAATTCAACTCCAGAGAAAACC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGGGTTTTCTCTGGAGTTaGATTCTCATTCAGTTTATC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLGFLWS*ILIQFI
Trigger: GATAAACTGAATGAGAATTCAACTCCAGAGAAAACC...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGATAAACATGCAGCAGTaGCAGCTTCAAACTATAATG +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLINMQQ*QLQTIM
Trigger: CATTATAGTTTGAAGCTGTCACTGCTGCATGTTTAT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGCAGTGAAGGCAACTTaGCTAAGAACTCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAAVKAT*LRTHFL
Trigger: AAGAAAGTGAGTTCTTAGTCAAGTTGCCTTCACTGC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000636985.2
CDS-3UTR TCA 90 bp ATCCATTCAACAACCTTATGCCTAAACATCATCATCCACATTTTACTGATGAGGTTTTCTCTTCTCCCTTaGCACATCTACACACACTCA +
Preference number: 4 (lower is better)
Translates to: IHSTTLCLNIIIHILLMRFSLLP*HIYTHS
Trigger: TGAGTGTGTGTAGATGTGTCAAGGGAGAAGAGAAAA...CCTCATCAGTAAAATGTGGATGATGATGTTTAGGCATAAGGTTGTTGAATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCCTTGCATAAGAAAGTaGCCTGTAGAATCTTTTACA +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAPCIRK*PVESFT
Trigger: TGTAAAAGATTCTACAGGGCACTTTCTTATGCAAGG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283256.10
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACACTGTTTAGCTCCTTaGATAAGAAAGTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVHCLAP*IRKCPV
Trigger: TACAGGGCACTTTCTTATGCAAGGAGCTAAACAGTG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283256.10
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTACTTAGCTTTCTCTTCTaGAATGCGTTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVLSFLF*NALFNS
Trigger: GCTATTGAACAACGCATTGCAGAAGAGAAAGCTAAG...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTGCCCATGAACAACTaGAATCCTATTAGCGCAAAC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLPMNN*NPISAN
Trigger: GTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNLSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIASSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAACCAGAGTTTCCCTTTaGCTTCTTCTATGCTTATCT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVTRVSL*LLLCLS
Trigger: AGATAAGCATAGAAGAAGGCAAAGGGAAACTCTGGT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTACAATGGTAAAACTTaGCAGCAAAGAGATTCACTC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNYNGKT*QQRDSL
Trigger: GAGTGAATCTCTTTGCTGGCAAGTTTTACCATTGTA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTACAATGGTAAAACTTaGCAGCAAAGAGATTCACTC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAYNGKT*QQRDSL
Trigger: GAGTGAATCTCTTTGCTGGCAAGTTTTACCATTGTA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAAGCAGAAACCTACACTaGATCCTAGTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTSRNLH*ILVLAS
Trigger: AGAAGCAAGGACTAGGATGCAGTGTAGGTTTCTGCT...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCAGCATTTTCCTGCATaGATTTCACCAACACACTAC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIQHFPA*ISPTHY
Trigger: GTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACAGCATTTTCCTGCATaGATTTCACCAACACACTAC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVQHFPA*ISPTHY
Trigger: GTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCGCAGGTTCAAATGAGTaGTTCCAAAAGACTTCTAGG +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIAGSNE*FQKTSR
Trigger: CCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGC...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000636985.2
CDS-3UTR GCA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAACTCTTTTCAACGTCATaGACACAAGTTTCAATGTTT +
Preference number: 4 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKLFSTS*TQVSMF
Trigger: AAACATTGAAACTTGTGTGCATGACGTTGAAAAGAG...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAATGCTCAGTAAGGACTaGTGTGGAGAAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAMLSKD*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGTCCTTACTGAGCAT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCATGCTCAGTAAGGACTaGTGTGGAGAAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIMLSKD*CGEENL
Trigger: GAGATTTTCTTCTCCACACCAGTCCTTACTGAGCAT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAGTTCTAGTGCCATATaGGTCAATAAGATCTATCTG +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIASSSAI*VNKIYL
Trigger: CAGATAGATCTTATTGACCCATATGGCACTAGAACT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACTGACAGTCATTCGATaGTACCCAATGTCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLTVIR*YPMSVR
Trigger: TCTAACAGACATTGGGTACCATCGAATGACTGTCAG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636384.2
3UTR CAA 72 bp AAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATaGCTTAATGACATGAAGAATGAGGTCTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: KSKKLFLVCCNL*LNDMKNEVLVE
Trigger: TTCTACCAAGACCTCATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000631182.2
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACACAAGATTGTCAGAACTaGAGGAACTCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTQDCQN*RNSKAR
Trigger: CCTTGCTTTTGAGTTCCTTCAGTTCTGACAATCTTG...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000673831.1
ENST00000673883.1
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTATCTGACAACACTTaGACTTCCGTACACAGTCTT +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLSDNT*TSVHSL
Trigger: AAGACTGTGTACGGAAGTTCAAGTGTTGTCAGATAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATCTTCTATGCTTATCTaGCAACACTTGAACTTCCGT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEESSMLI*QHLNFR
Trigger: ACGGAAGTTCAAGTGTTGTCAGATAAGCATAGAAGA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTCTTCTATGCTTATCTaGCAACACTTGAACTTCCGT +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYISSMLI*QHLNFR
Trigger: ACGGAAGTTCAAGTGTTGTCAGATAAGCATAGAAGA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCTTGGTAAAATACACTTaGAAACCATATGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFLVKYT*KPYATH
Trigger: GTGGGTTGCATATGGTTTTCAAGTGTATTTTACCAA...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTAAACGTGGCTACTTaGAGTAGAGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLNVAT*SRDRYP
Trigger: TGGATATCTGTCTCTACTTCAAGTAGCCACGTTTAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTAAACGTGGCTACTTaGAGTAGAGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLNVAT*SRDRYP
Trigger: TGGATATCTGTCTCTACTTCAAGTAGCCACGTTTAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTAAACGTGGCTACTTaGAGTAGAGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHALNVAT*SRDRYP
Trigger: TGGATATCTGTCTCTACTTCAAGTAGCCACGTTTAA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCGCTTCACTTTACCACTaGTATATGGCTTCCCATATT +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIASLYH*YMASHI
Trigger: AATATGGGAAGCCATATATCAGTGGTAAAGTGAAGC...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAAATGCAGGTTCAAATaGGTGCTTCCAAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHKCRFK*VLPKDF
Trigger: GAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000636985.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACTTAGCTTTCTCTTCTaGAATGCGTTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLSFLF*NALFNS
Trigger: GCTATTGAACAACGCATTGCAGAAGAGAAAGCTAAG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCACTTAGCTTTCTCTTCTaGAATGCGTTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHALSFLF*NALFNS
Trigger: GCTATTGAACAACGCATTGCAGAAGAGAAAGCTAAG...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTCTTAGCTTTCTCTTCTaGAATGCGTTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSLSFLF*NALFNS
Trigger: GCTATTGAACAACGCATTGCAGAAGAGAAAGCTAAG...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636135.1
ENST00000636662.2
ENST00000637367.1
CDS-3UTR GCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACATGGAAGAGATTTTCCTaGTTCCAAGTCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTWKRFS*FQVTVW
Trigger: CCAAACAGTGACTTGGAAGCAGGAAAATCTCTTCCA...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGACTGAATCGAGAGATTaGTTTCCCTTTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLTESRD*FPFIQY
Trigger: GTATTGAATAAAGGGAAAGCAATCTCTCGATTCAGT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACACTGAATCGAGAGATTaGTTTCCCTTTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNTESRD*FPFIQY
Trigger: GTATTGAATAAAGGGAAAGCAATCTCTCGATTCAGT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAATACTCATTGCTCTTTaGCTTGATGTAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVILIAL*LDVGSS
Trigger: GGAAGATCCTACATCAAGGCAAAGAGCAATGAGTAT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAAAATCGATTCCTTTCTaGATCCTTCCCACAGCAATC +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTKSIPF*ILPTAI
Trigger: GATTGCTGTGGGAAGGATGCAGAAAGGAATCGATTT...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000673831.1
ENST00000673883.1
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAACCAGAGTTTCCCTTTaGCTTCTTCTATGCTTATCT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEETRVSL*LLLCLS
Trigger: AGATAAGCATAGAAGAAGGCAAAGGGAAACTCTGGT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAACCAGAGTTTCCCTTTaGCTTCTTCTATGCTTATCT +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHATRVSL*LLLCLS
Trigger: AGATAAGCATAGAAGAAGGCAAAGGGAAACTCTGGT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACTCTTCCTTGTTTGCTaGAACCTATTGCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLFLVC*NLLLND
Trigger: GTCATTAAGCAATAGGTTGCAGCAAACAAGGAAGAG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACTGCATCCTAGTCCTTaGTTCTTATTTTGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLHPSP*FLFCEV
Trigger: CACTTCACAAAATAAGAAGCAAGGACTAGGATGCAG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTCTGCATCCTAGTCCTTaGTTCTTATTTTGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSLHPSP*FLFCEV
Trigger: CACTTCACAAAATAAGAAGCAAGGACTAGGATGCAG...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
CDS-3UTR GCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACTTCAAGTTCTTCCATaGTGTTGGTCAAAATACTGG +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLQVLP*CWSKYW
Trigger: CCAGTATTTTGACCAACACCATGGAAGAACTTGAAG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636662.2
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 4 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACAAAATATGGCAGGTGTaGCAGTTAAAACATAAACAC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNKIWQV*QLKHKH
Trigger: GTGTTTATGTTTTAACTGCCACACCTGCCATATTTT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 4 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 4 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATATAACTTCACTACCTaGTTTTGTGGGAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVYNFTT*FCGRGK
Trigger: TTTTCCTCTCCCACAAAACCAGGTAGTGAAGTTATA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAACCATTCCCATCCAATaGATTGTTAAAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVTIPIQ*IVKEGS
Trigger: ACTTCCTTCTTTAACAATTCATTGGATGGGAATGGT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAACCATTCCCATCCAATaGATTGTTAAAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEETIPIQ*IVKEGS
Trigger: ACTTCCTTCTTTAACAATTCATTGGATGGGAATGGT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAACCATTCCCATCCAATaGATTGTTAAAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHATIPIQ*IVKEGS
Trigger: ACTTCCTTCTTTAACAATTCATTGGATGGGAATGGT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAGGTTTTCTCTGGAGTTaGATTCTCATTCAGTTTATC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVGFLWS*ILIQFI
Trigger: GATAAACTGAATGAGAATTCAACTCCAGAGAAAACC...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAGGTTTTCTCTGGAGTTaGATTCTCATTCAGTTTATC +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAGFLWS*ILIQFI
Trigger: GATAAACTGAATGAGAATTCAACTCCAGAGAAAACC...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR TCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCGGTTTTCTCTGGAGTTaGATTCTCATTCAGTTTATC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIGFLWS*ILIQFI
Trigger: GATAAACTGAATGAGAATTCAACTCCAGAGAAAACC...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCCTTGCATAAGAAAGTaGCCTGTAGAATCTTTTACA +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIPCIRK*PVESFT
Trigger: TGTAAAAGATTCTACAGGGCACTTTCTTATGCAAGG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283256.10
ENST00000636662.2
ENST00000636769.1
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEELSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVLSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTATCTGGAGGCCATTaGAAACATTTATTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHALSGGH*KHLFRR
Trigger: CCTACGAAATAAATGTTTGCAATGGCCTCCAGATAA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYISSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATACAATGGTAAAACTTaGCAGCAAAGAGATTCACTC +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEYNGKT*QQRDSL
Trigger: GAGTGAATCTCTTTGCTGGCAAGTTTTACCATTGTA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATACAATGGTAAAACTTaGCAGCAAAGAGATTCACTC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVYNGKT*QQRDSL
Trigger: GAGTGAATCTCTTTGCTGGCAAGTTTTACCATTGTA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTACAATGGTAAAACTTaGCAGCAAAGAGATTCACTC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIYNGKT*QQRDSL
Trigger: GAGTGAATCTCTTTGCTGGCAAGTTTTACCATTGTA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAAAGGAAGAATTATCTaGAGGCCATTGCAAACATTT +
Preference number: 4 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVKGRII*RPLQTF
Trigger: AAATGTTTGCAATGGCCTCCAGATAATTCTTCCTTT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAATTTCTATGGTGGTATaGTTGGAAATACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVISMVV*LEIQLS
Trigger: AGACAGCTGTATTTCCAACCATACCACCATAGAAAT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAAGTTCTAGTGCCATATaGGTCAATAAGATCTATCTG +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEESSSAI*VNKIYL
Trigger: CAGATAGATCTTATTGACCCATATGGCACTAGAACT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCAGTTCTAGTGCCATATaGGTCAATAAGATCTATCTG +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYISSSAI*VNKIYL
Trigger: CAGATAGATCTTATTGACCCATATGGCACTAGAACT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 4 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
CDS-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCGGCTTGATTGTAATGTaGTTTACCGTTCTTTATGGT +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIGLIVM*FTVLYG
Trigger: ACCATAAAGAACGGTAAACCACATTACAATCAAGCC...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAACTGAATCGAGAGATTaGTTTCCCTTTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVTESRD*FPFIQY
Trigger: GTATTGAATAAAGGGAAAGCAATCTCTCGATTCAGT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCACTGAATCGAGAGATTaGTTTCCCTTTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYITESRD*FPFIQY
Trigger: GTATTGAATAAAGGGAAAGCAATCTCTCGATTCAGT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAACTGAATCGAGAGATTaGTTTCCCTTTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHATESRD*FPFIQY
Trigger: GTATTGAATAAAGGGAAAGCAATCTCTCGATTCAGT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACATCATCTAAAGCTTTCTaGTTCCTAACAAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTSSKAF*FLTKAF
Trigger: GAAAGCCTTTGTTAGGAAGCAGAAAGCTTTAGATGA...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000673831.1
ENST00000673883.1
CDS-3UTR GCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAATGGCTAAACAATACTaGAGGATAAAGCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAMAKQY*RIKQNQ
Trigger: TTGATTCTGCTTTATCCTGCAGTATTGTTTAGCCAT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR GCA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAATTGGATTCAAGCAATaGCAAGAGTATCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTIGFKQ*QEYQLI
Trigger: AATCAGCTGATACTCTTGGCATTGCTTGAATCCAAT...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CCA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAAAAGGAAGAATTATCTaGAGGCCATTGCAAACATTT +
Preference number: 4 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAKGRII*RPLQTF
Trigger: AAATGTTTGCAATGGCCTCCAGATAATTCTTCCTTT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAAAGGAAGAATTATCTaGAGGCCATTGCAAACATTT +
Preference number: 4 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHKGRII*RPLQTF
Trigger: AAATGTTTGCAATGGCCTCCAGATAATTCTTCCTTT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 4 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 4 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CCA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTTACCACTGATATATaGCTTCCCATATTAGACTTC +
Preference number: 4 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVFTTDI*LPILDF
Trigger: GAAGTCTAATATGGGAAGCCATATATCAGTGGTAAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
3UTR CAA 72 bp CTTTCCACTAGTCTACCTGATGCCATATCTAGCTTTTaGGCCAATATTAAAGTAGTTATCCAATACACTCTT +
Preference number: 4 (lower is better)
Translates to: LSTSLPDAISSF*ANIKVVIQYTL
Trigger: AAGAGTGTATTGGATAACTACTTTAATATTGGCCAAAAAGCTAGATATGGCATCAGGTAGACTAGTGGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636384.2
ENST00000636662.2
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCTGGCCTGGCTGACATaGCTGTGGCGCCGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRLAWLT*LWRRSP
Trigger: TGGAGAACGGCGCCACAGCAATGTCAGCCAGGCCAG...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCACTGGCCTGGCTGACATaGCTGTGGCGCCGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISLAWLT*LWRRSP
Trigger: TGGAGAACGGCGCCACAGCAATGTCAGCCAGGCCAG...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCCCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSRLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGTTCCTCTCAGTGGTTTaGCTATGGCAAGGAGCGGAA +
Preference number: 5 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQFLSVV*LWQGAE
Trigger: TTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAA...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
CDS GCA 90 bp ATTCAATGCCAGCCCATGGAAGTAGTCAGGAGGGAAGCTGTACCCTaGAAAGTGACAGGGGTGGAGCTGCTGAAGACCAAGGGAACCCAC +
Preference number: 5 (lower is better)
Translates to: IQCQPMEVVRREAVP*KVTGVELLKTKGTH
Trigger: GTGGGTTCCCTTGGTCTTCAGCAGCTCCACCCCTGTCACTTTGCAGGGTACAGCTTCCCTCCTGACTACTTCCATGGGCTGGCATTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CAA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCTCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSSSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGCCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGCCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCACCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRRLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGACCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 5 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCACCCAGAGTTTGGGATaGATAAGCTGGCACCAAGAA +
Preference number: 5 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSTQSLG*ISWHQE
Trigger: TTCTTGGTGCCAGCTTATCAATCCCAAACTCTGGGT...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR CAA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGTCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRSSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTTTTCCACCTGGCAGTTaGATTGCTCTCAATGAGAGC +
Preference number: 5 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLFPPGS*IALNES
Trigger: GCTCTCATTGAGAGCAATCAAACTGCCAGGTGGAAA...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGACCATTCCTTGGAATTaGTTAGCAGGTCGAGGTATG +
Preference number: 5 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQTIPWN*LAGRGM
Trigger: CATACCTCGACCTGCTAACAAATTCCAAGGAATGGT...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGCCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 5 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSAPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCGCAAGAAGCTCTTCCTaGTTTGCTGCAACCTATTGC +
Preference number: 5 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAARSSS*FAATYC
Trigger: GCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGC...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGTTCCTCTCAGTGGTTTaGCTATGGCAAGGAGCGGAA +
Preference number: 5 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGFLSVV*LWQGAE
Trigger: TTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAA...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636384.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGTTTCCACCTGGCAGTTaGATTGCTCTCAATGAGAGC +
Preference number: 5 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVFPPGS*IALNES
Trigger: GCTCTCATTGAGAGCAATCAAACTGCCAGGTGGAAA...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 5 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGTTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGLLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCCAGCTTGCAACATGTTaGTACAGTCGGGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSQLATC*YSRAFH
Trigger: ATGAAAAGCCCGACTGTACAAACATGTTGCAAGCTG...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGAGACTTCTAGGATCATaGGTCCATTACACGGTCAGG +
Preference number: 5 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSARLLGS*VHYTVR
Trigger: CCTGACCGTGTAATGGACCAATGATCCTAGAAGTCT...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR CAA 90 bp CAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGAGGGACAGGGAGCTAACGCAGGCGAGGTaGGGGAAGAACGTACTAGAG +
Preference number: 5 (lower is better)
Translates to: QGAEGQTIFKRFTWRDRELTQAR*GKNVLE
Trigger: CTCTAGTACGTTCTTCCCCAACCTCGCCTGCGTTAG...CTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CAA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATGCTCAGAATCTTATTaGGCACCTACAAGTCACCTG +
Preference number: 5 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRCSESY*APTSHL
Trigger: CAGGTGACTTGTAGGTGCCAAATAAGATTCTGAGCA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS GCA 90 bp AGCCACGGATGCTCAGTAAGGACTGGAAAAGCCACAGACATTCAATaGCAGCCCATGGAAGTAGTCAGGAGGGAAGCTGTACCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SHGCSVRTGKATDIQ*QPMEVVRREAVPCK
Trigger: TTTGCAGGGTACAGCTTCCCTCCTGACTACTTCCATGGGCTGGCATTGAATGTCTGTGGCTTTTCCAGTCCTTACTGAGCATCCGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CAA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAATGCTCACTGTCCTATaGAAAGTAGTACCATTCCCA +
Preference number: 5 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRMLTVL*KVVPFP
Trigger: TGGGAATGGTACTACTTTCAATAGGACAGTGAGCAT...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAACCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CAA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGGCATTTAGCTTCTCTTaGCTTTCCTCCATATCTGAC +
Preference number: 5 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLAFSFS*LSSISD
Trigger: GTCAGATATGGAGGAAAGCAAAGAGAAGCTAAATGC...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCGCATTTAGCTTCTCTTaGCTTTCCTCCATATCTGAC +
Preference number: 5 (lower is better)
Translates to: FKGFLRFNLRLFSLGGSSAFSFS*LSSISD
Trigger: GTCAGATATGGAGGAAAGCAAAGAGAAGCTAAATGC...GGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCGCATTTAGCTTCTCTTaGCTTTCCTCCATATCTGAC +
Preference number: 5 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAAFSFS*LSSISD
Trigger: GTCAGATATGGAGGAAAGCAAAGAGAAGCTAAATGC...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGACCATTCCTTGGAATTaGTTAGCAGGTCGAGGTATG +
Preference number: 5 (lower is better)
Translates to: FRFKGFLRFNLRLFSLGGTIPWN*LAGRGM
Trigger: CATACCTCGACCTGCTAACAAATTCCAAGGAATGGT...CCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGTTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRLLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCTGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGCTTCCCCATAGTAAGTaGTCCTACTGCAATCAAGCG +
Preference number: 5 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSLPHSK*SYCNQA
Trigger: CGCTTGATTGCAGTAGGACAACTTACTATGGGGAAG...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CAA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTTCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVSSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCCTGGCCTGGCTGACATaGCTGTGGCGCCGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: NESFALTVVVDHAYIKHLLAWLT*LWRRSP
Trigger: TGGAGAACGGCGCCACAGCAATGTCAGCCAGGCCAG...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAAAGTTCTTCCATGGTGTaGGTCAAAATACTGGCTATA +
Preference number: 5 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQSSSMV*VKILAI
Trigger: TATAGCCAGTATTTTGACCAACACCATGGAAGAACT...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
CDS-3UTR CAA 90 bp CTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGATCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LRLFSLGGSSNINRAAFRSMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...TCTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR CAA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGTCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLSMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR CAA 90 bp CCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCAGTACCTTTTTAACTTTTaGCTTCAAGAGGTAGCGTCT +
Preference number: 5 (lower is better)
Translates to: PQAVLPRRELQYQPCCLQYLFNF*LQEVAS
Trigger: AGACGCTACCTCTTGAAGCAAAAAGTTAAAAAGGTA...CTGAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCTCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFSGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGTCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLSGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGAGGGACAGGGAGTTCCTCTCAGTGGTTTaGCTATGGCAAGGAGCGGAA +
Preference number: 5 (lower is better)
Translates to: QGAEGQTIFKRFTWRDREFLSVV*LWQGAE
Trigger: TTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAA...CTCCCTGTCCCTCCAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CAA 90 bp AACAGTAGTTTGTGGTCCCAGCTCTGTCTTGTCTGTAGACTAGGCTGGCAGTCCCCAATGAAGGGTCTCTaGCCATCGTGTCTGGAAACT +
Preference number: 5 (lower is better)
Translates to: NSSLWSQLCLVCRLGWQSPMKGL*PSCLET
Trigger: AGTTTCCAGACACGATGGCAAGAGACCCTTCATTGG...GGACTGCCAGCCTAGTCTACAGACAAGACAGAGCTGGGACCACAAACTACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS CCA 90 bp TGGCTTGCCTCTGAGGCTGCAATCAGAAGGCTCAGCCCTGAGCTTTaGCAGAGCCACTGCCATGTTAATCTGCTTCATTATATCTCTACA +
Preference number: 5 (lower is better)
Translates to: WLASEAAIRRLSPEL*QSHCHVNLLHYIST
Trigger: TGTAGAGATATAATGAAGCAGATTAACATGGCAGTGGCTCTGCCAAAGCTCAGGGCTGAGCCTTCTGATTGCAGCCTCAGAGGCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638151.1
CDS CCA 90 bp CATAGCCAGCAGAAATCGTTCAAAAGGCCTTTGGACTCAGAATATTaGCTTGCCTCTGAGGCTGCAATCAGAAGGCTCAGCCCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: HSQQKSFKRPLDSEY*LASEAAIRRLSPEL
Trigger: AAGCTCAGGGCTGAGCCTTCTGATTGCAGCCTCAGAGGCAAGCCAATATTCTGAGTCCAAAGGCCTTTTGAACGATTTCTGCTGGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638151.1
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCTGGCCTGGCTGACATaGCTGTGGCGCCGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLLAWLT*LWRRSP
Trigger: TGGAGAACGGCGCCACAGCAATGTCAGCCAGGCCAG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGAGTTCTTCCATGGTGTaGGTCAAAATACTGGCTATA +
Preference number: 5 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVSSSMV*VKILAI
Trigger: TATAGCCAGTATTTTGACCAACACCATGGAAGAACT...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636662.2
CDS-3UTR CAA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGAATGTTTGTCATTTCTaGACTCTGGTCATCGGTTTC +
Preference number: 5 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVNVCHF*TLVIGF
Trigger: GAAACCGATGACCAGAGTCAAGAAATGACAAACATT...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTCTACCTTTTTAACTTTTaGCTTCAAGAGGTAGCGTCT +
Preference number: 5 (lower is better)
Translates to: NLRLFSLGGSSNINRAAFYLFNF*LQEVAS
Trigger: AGACGCTACCTCTTGAAGCAAAAAGTTAAAAAGGTA...GAAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCGGTTTTCTCTGGAGTaGAATTCTCATTCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLRFSLE*NSHSVY
Trigger: ATAAACTGAATGAGAATTCAACTCCAGAGAAAACCG...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGTGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCAATCATCATTTTTGTTaGCTCAAACATGCACCACTG +
Preference number: 5 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCNHHFC*LKHAPL
Trigger: CAGTGGTGCATGTTTGAGCAAACAAAAATGATGATT...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCTTTTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 5 (lower is better)
Translates to: QPQAVLPRRELQYQPCCLLPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...AAGGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCTTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 5 (lower is better)
Translates to: VQPQAVLPRRELQYQPCCLPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...GCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAAATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: QGIPQVQPQAVLPRRELQMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...TTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGCCGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: FNLRLFSLGGSSNINRAAVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...GGCAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGCTGAAATCTTCCATGGTGTaGGTCAAAATACTGGCTATA +
Preference number: 5 (lower is better)
Translates to: GSTSGCSPSAGAPISTVLKSSMV*VKILAI
Trigger: TATAGCCAGTATTTTGACCAACACCATGGAAGATTT...CAGCACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636384.2
CDS-3UTR CAA 90 bp AGTTTGTGGTCCCAGCTCTGTCTTGTCTGTAGACTAGGCTGGCAGTCCCATCCAGACTACTACATCTATTaGGGTGGAGCCACATCTGAT +
Preference number: 5 (lower is better)
Translates to: SLWSQLCLVCRLGWQSHPDYYIY*GGATSD
Trigger: ATCAGATGTGGCTCCACCCAAATAGATGTAGTAGTC...TGGATGGGACTGCCAGCCTAGTCTACAGACAAGACAGAGCTGGGACCACAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR CAA 90 bp ACTAGGCTGGCAGTCCCATCCATTGTGACTACTACATCTATTTGGGTGGAGCCACTGGGAAACAGTAGTTaGTGGTCCCAGCTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: TRLAVPSIVTTTSIWVEPLGNSS*WSQLCL
Trigger: AAGACAGAGCTGGGACCACAAACTACTGTTTCCCAG...TGGCTCCACCCAAATAGATGTAGTAGTCACAATGGATGGGACTGCCAGCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS CCA 90 bp CAAGGGATTCCCATCATAGCCAGCAGAAATCGTTCAAAAGGCCTTTaGACTCAGAATATTGGCTTGCCTCTGAGGCTGCAATCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: QGIPIIASRNRSKGL*TQNIGLPLRLQSEG
Trigger: GCCTTCTGATTGCAGCCTCAGAGGCAAGCCAATATTCTGAGTCCAAAGGCCTTTTGAACGATTTCTGCTGGCTATGATGGGAATCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638151.1
CDS CCA 90 bp ATCGGTAGCAGAACCACTGGCAGCTTCCTCTCAGTGGTTTTGCTATaGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTTC +
Preference number: 5 (lower is better)
Translates to: IGSRTTGSFLSVVLL*QGAEGQTIFKRFTF
Trigger: GAAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGCCAGTGGTTCTGCTACCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636769.1
CDS-3UTR CAA 90 bp CAGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: QASGSRDSSGSTSGCSPSSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...CGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp AGGCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGTCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: RLQVQGIPQVQPQAVLPRSMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...CCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000674133.1
CDS-3UTR CAA 90 bp CTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGTACCTTTTTAACTTTTaGCTTCAAGAGGTAGCGTCT +
Preference number: 5 (lower is better)
Translates to: LQVQGIPQVQPQAVLPRRYLFNF*LQEVAS
Trigger: AGACGCTACCTCTTGAAGCAAAAAGTTAAAAAGGTA...CCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GCTTCAGGTTCAAGGGATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGAATCATCATTTTTGTTaGCTCAAACATGCACCACTG +
Preference number: 5 (lower is better)
Translates to: ASGSRDSSGSTSGCSPSANHHFC*LKHAPL
Trigger: CAGTGGTGCATGTTTGAGCAAACAAAAATGATGATT...CGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATCCCTTGAACCTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGAATCATCATTTTTGTTaGCTCAAACATGCACCACTG +
Preference number: 5 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVNHHFC*LKHAPL
Trigger: CAGTGGTGCATGTTTGAGCAAACAAAAATGATGATT...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCATCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISSGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAACCGTGGAATCCACGTATGTGTaGAATATAACAGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: SGSTSGCSPSAGAPISTVESTYV*NITVSN
Trigger: ATTGGAGACTGTTATATTCAACACATACGTGGATTC...CACGGTTGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636384.2
CDS-3UTR CAA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTGGCAGTGAAGGCAACTaGACTAAGAACTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVGSEGN*TKNSLS
Trigger: AGAAAGTGAGTTCTTAGTCAAGTTGCCTTCACTGCC...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS CCA 90 bp ATCGGTAGCAGAACCACTGGCAGCTTCCTCTCAGTGGTTTTGCTATaGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTTA +
Preference number: 5 (lower is better)
Translates to: IGSRTTGSFLSVVLL*QGAEGQTIFKRFTL
Trigger: TAAGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGGAAGCTGCCAGTGGTTCTGCTACCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636384.2
CDS-3UTR CAA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: NESFALTVVVDHAYIKHLRLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCTGGCCTGGCTGACATaGCTGTGGCGCCGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHLAWLT*LWRRSP
Trigger: TGGAGAACGGCGCCACAGCAATGTCAGCCAGGCCAG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GATTCCTCAGGTTCAACCTCAGGCTGTTCTCCCTCGGCGGGAGCTCCAATATCAGAATCCACGTATGTGTaGAATATAACAGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: DSSGSTSGCSPSAGAPISESTYV*NITVSN
Trigger: ATTGGAGACTGTTATATTCAACACATACGTGGATTC...TGATATTGGAGCTCCCGCCGAGGGAGAACAGCCTGAGGTTGAACCTGAGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636135.1
ENST00000636384.2
CDS-3UTR CAA 90 bp AGGCCAGCCTTCTTCACCATCATCCCTGGGACTAGCCCAGAACCAATTAGTAAAATGCTCACTGTCCTATaGAAAGTAGTACCATTCCCA +
Preference number: 5 (lower is better)
Translates to: RPAFFTIIPGTSPEPISKMLTVL*KVVPFP
Trigger: TGGGAATGGTACTACTTTCAATAGGACAGTGAGCAT...TTTACTAATTGGTTCTGGGCTAGTCCCAGGGATGATGGTGAAGAAGGCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CAA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIARLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNRLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTATGAGAGTATCTTCTTaGATGGGTGTTCCATCACAT +
Preference number: 5 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVMRVSS*MGVPSH
Trigger: ATGTGATGGAACACCCATCAAAGAAGATACTCTCAT...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp CCTCTCAGTGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGAAATATACCTTACATTaGCAGCAGCTTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: PLSGFAMARSGRPDNLQKKYTLH*QQLSGG
Trigger: GCCTCCAGAAAGCTGCTGCAAATGTAAGGTATATTT...CTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCACTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS TCA 90 bp CGCCTGTGCCTTCTTCAAGTCTTTCCACTGCCATTTCATGACAGGTaGATGCAAGAAAATGCATTCACCTTAGAGGAGATTGGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: RLCLLQVFPLPFHDR*MQENAFTLEEIGSK
Trigger: CTTAGAGCCAATCTCCTCTAAGGTGAATGCATTTTCTTGCATTCACCTGTCATGAAATGGCAGTGGAAAGACTTGAAGAAGGCACAGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635945.1
CDS TCA 90 bp AGTGCAACGCCTGTGCCTTCTTCAAGTCTTTCCACTGCCATTTCATaGCAGGTGAATGCAAGAAAATGCATTCACCTTAGAGGAGATTGG +
Preference number: 5 (lower is better)
Translates to: SATPVPSSSLSTAIS*QVNARKCIHLRGDW
Trigger: CCAATCTCCTCTAAGGTGAATGCATTTTCTTGCATTCACCTGTCATGAAATGGCAGTGGAAAGACTTGAAGAAGGCACAGGCGTTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635945.1
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TCACAAATGCAGGTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATTGGTCCCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: SQMQVQMSASKRLLGSLVPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...GACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVRLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTCGGTTTTCTCTGGAGTaGAATTCTCATTCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVRFSLE*NSHSVY
Trigger: ATAAACTGAATGAGAATTCAACTCCAGAGAAAACCG...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TCATACGAGGGTGGAGACGTGGTGGAAGGCGTCATATCGGTTTTCTCTGGAGTTTTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 5 (lower is better)
Translates to: SYEGGDVVEGVISVFSGVLPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...AACTCCAGAGAAAACCGATATGACGCCTTCCACCACGTCTCCACCCTCGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS TCA 90 bp TCATCCTGCTCCTTTAATCACTGTTTAGCTCCTTGCATAAGAAAGTaGGTGCTGCATGGCTGGGAAGGCCTCAGGAAATTTACAATCATG +
Preference number: 5 (lower is better)
Translates to: SSCSFNHCLAPCIRK*VLHGWEGLRKFTIM
Trigger: CATGATTGTAAATTTCCTGAGGCCTTCCCAGCCATGCAGCACTCACTTTCTTATGCAAGGAGCTAAACAGTGATTAAAGGAGCAGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636071.2
CDS CCA 90 bp AGTGATTGTCTCTGGGAGAAGGAGGGATTGACAGGAAAAGGGTACTaGGGTGATAGAAATATTCTACATCTTAATTGGAGCAGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: SDCLWEKEGLTGKGY*GDRNILHLNWSSCQ
Trigger: CTGGCAACTGCTCCAATTAAGATGTAGAATATTTCTATCACCCCAGTACCCTTTTCCTGTCAATCCCTCCTTCTCCCAGAGACAATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTTCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIASSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLSSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TCACAAATGCAGGTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATTGGTCTCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SQMQVQMSASKRLLGSLVSSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...GACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTACCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCACCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCCCCTACTGTTGCGTCTaGGAGAGAAAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIPYCCV*ERKGSH
Trigger: GTGGCTCCCTTTTCTCTCCAAGACGCAACAGTAGGG...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEERLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAGGCTCGCCCTACTGTaGCGTCTTGGAGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHRLALL*RLGEKR
Trigger: CCTTTTCTCTCCAAGACGCAACAGTAGGGCGAGCCT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TGGTTTTGCTATGGCAAGGAGCGGAAGGCCAGACAATCTTCAAAAGATTTACCTGGCAGTGAAGGCAACTaGACTAAGAACTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: WFCYGKERKARQSSKDLPGSEGN*TKNSLS
Trigger: AGAAAGTGAGTTCTTAGTCAAGTTGCCTTCACTGCC...AGGTAAATCTTTTGAAGATTGTCTGGCCTTCCGCTCCTTGCCATAGCAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAAAGGGAACCCACCTCTaGCATCAGCGTAACCTGGTG +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEKGTHL*HQRNLV
Trigger: CACCAGGTTACGCTGATGCAAGAGGTGGGTTCCCTT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACACCCAGAGTTTGGGATaGATAAGCTGGCACCAAGAA +
Preference number: 5 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNTQSLG*ISWHQE
Trigger: TTCTTGGTGCCAGCTTATCAATCCCAAACTCTGGGT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283256.10
ENST00000636662.2
CDS-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTCCTTGCGTTCCTGTTaGGGTCTCTTAGCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNSLRSC*GLLAFS
Trigger: AGAGAAAGCTAAGAGACCCAAACAGGAACGCAAGGA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVSSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACCCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCACCTGCATCTGAGCTGTaGCCACAAAGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAPASEL*PQSRAS
Trigger: TGATGCTCTGCTTTGTGGCAACAGCTCAGATGCAGG...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACTTTCCACCTGGCAGTTaGATTGCTCTCAATGAGAGC +
Preference number: 5 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNFPPGS*IALNES
Trigger: GCTCTCATTGAGAGCAATCAAACTGCCAGGTGGAAA...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLLLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGCAAGAAGCTCTTCCTaGTTTGCTGCAACCTATTGC +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAARSSS*FAATYC
Trigger: GCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGGCAAGAAGCTCTTCCTaGTTTGCTGCAACCTATTGC +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLARSSS*FAATYC
Trigger: GCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGC...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAGACTTCTAGGATCATaGGTCCATTACACGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIARLLGS*VHYTVR
Trigger: CCTGACCGTGTAATGGACCAATGATCCTAGAAGTCT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000636985.2
CDS-3UTR CAA 90 bp TTAGGGAGAGAGGAAGTTGTCTTCTCTGCTTCTAGAACTATCAGTTTTCAGAAACCAATGAAGGGTCTCTaGCCATCGTGTCTGGAAACA +
Preference number: 5 (lower is better)
Translates to: LGREEVVFSASRTISFQKPMKGL*PSCLET
Trigger: TGTTTCCAGACACGATGGCAAGAGACCCTTCATTGG...TTTCTGAAAACTGATAGTTCTAGAAGCAGAGAAGACAACTTCCTCTCTCCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673883.1
CDS GCA 90 bp CCTTCTTTGTTAAGGCTGAAGAGTATTTCATTGTGTGTGTGTGTGTaGGTGTGTGTGTGTGTGCAATTCTTTATCCGTTCCTCATCTACA +
Preference number: 5 (lower is better)
Translates to: PSLLRLKSISLCVCV*VCVCVQFFIRSSST
Trigger: TGTAGATGAGGAACGGATAAAGAATTGCACACACACACACACGCACACACACACACACAATGAAATACTCTTCAGCCTTAACAAAGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEESSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHASSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATCATCATCCTCATCCTaGCGTTCCTGTTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVSSSSS*RSCLGL
Trigger: GAGACCCAAACAGGAACGCAAGGATGAGGATGATGA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CAGAACCTTCACTTAGGGAGAGAGGAAGTTGTCTTCTCTGCTTCTAGAACTATCTCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: QNLHLGREEVVFSASRTISMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...GATAGTTCTAGAAGCAGAGAAGACAACTTCCTCTCTCCCTAAGTGAAGGTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673831.1
ENST00000673883.1
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTACCATTCCTTGGAATTaGTTAGCAGGTCGAGGTATG +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIATIPWN*LAGRGM
Trigger: CATACCTCGACCTGCTAACAAATTCCAAGGAATGGT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGACCATTCCTTGGAATTaGTTAGCAGGTCGAGGTATG +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLTIPWN*LAGRGM
Trigger: CATACCTCGACCTGCTAACAAATTCCAAGGAATGGT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCACCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAACCTGTGGGAGTCCTGTaGACACAAACACATCACCAT +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEPVGVL*TQTHHH
Trigger: ATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGG...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVLLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGCAAGAAGCTCTTCCTaGTTTGCTGCAACCTATTGC +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVARSSS*FAATYC
Trigger: GCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAGATTTACCTTACATTaGCAGCAGCTTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIARFTLH*QQLSGG
Trigger: GCCTCCAGAAAGCTGCTGCAAATGTAAGGTAAATCT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636384.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGGCAGTGAAGGCAACTaGACTAAGAACTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAGSEGN*TKNSLS
Trigger: AGAAAGTGAGTTCTTAGTCAAGTTGCCTTCACTGCC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000636985.2
CDS-3UTR CAA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCAGACTTCTAGGATCATaGGTCCATTACACGGTCAGG +
Preference number: 5 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFRLLGS*VHYTVR
Trigger: CCTGACCGTGTAATGGACCAATGATCCTAGAAGTCT...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636662.2
ENST00000637367.1
CDS GCA 90 bp ATAGCAGAGTCTGACTTAGTAAGTTTGGGGAAAGGCCTAAGAATTTaGATTTCTACAGGTTCCCAGGGTGAAGTTAATGATACTAGTCTG +
Preference number: 5 (lower is better)
Translates to: IAESDLVSLGKGLRI*ISTGSQGEVNDTSL
Trigger: CAGACTAGTATCATTAACTTCACCCTGGGAACCTGTAGAAATGCAAATTCTTAGGCCTTTCCCCAAACTTACTAAGTCAGACTCTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480032.4
CDS GCA 90 bp AGATTAAATTCACCACAGCACCTCAGTCTTTTCCATAAAGCCCTGTaGAAGATGCTGCTGAAAAAGAACAGAAGAGAAGAATTGGGATTG +
Preference number: 5 (lower is better)
Translates to: RLNSPQHLSLFHKAL*KMLLKKNRREELGL
Trigger: CAATCCCAATTCTTCTCTTCTGTTCTTTTTCAGCAGCATCTTGCACAGGGCTTTATGGAAAAGACTGAGGTGCTGTGGTGAATTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATTTTACACCCAGAGTTaGGGATTGATAAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVFYTQS*GLISWH
Trigger: GTGCCAGCTTATCAATCCCAAACTCTGGGTGTAAAA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283256.10
ENST00000636662.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGATGCTCACTGTCCTATaGAAAGTAGTACCATTCCCA +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLMLTVL*KVVPFP
Trigger: TGGGAATGGTACTACTTTCAATAGGACAGTGAGCAT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTATGCTCACTGTCCTATaGAAAGTAGTACCATTCCCA +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAMLTVL*KVVPFP
Trigger: TGGGAATGGTACTACTTTCAATAGGACAGTGAGCAT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CATCGTGTCTGGAAACTAAGAATGGCTCATAAAAATCCTGGTCTGGGAAACAGTTCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: HRVWKLRMAHKNPGLGNSSMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...ACTGTTTCCCAGACCAGGATTTTTATGAGCCATTCTTAGTTTCCAGACACGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673831.1
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGCATTTAGCTTCTCTTaGCTTTCCTCCATATCTGAC +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAAFSFS*LSSISD
Trigger: GTCAGATATGGAGGAAAGCAAAGAGAAGCTAAATGC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATTTCCACCTGGCAGTTaGATTGCTCTCAATGAGAGC +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVFPPGS*IALNES
Trigger: GCTCTCATTGAGAGCAATCAAACTGCCAGGTGGAAA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTTTCCACCTGGCAGTTaGATTGCTCTCAATGAGAGC +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHFPPGS*IALNES
Trigger: GCTCTCATTGAGAGCAATCAAACTGCCAGGTGGAAA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTTTCCACCTGGCAGTTaGATTGCTCTCAATGAGAGC +
Preference number: 5 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIFPPGS*IALNES
Trigger: GCTCTCATTGAGAGCAATCAAACTGCCAGGTGGAAA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCCACCTGGCAGTTaGATTGCTCTCAATGAGAGC +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAFPPGS*IALNES
Trigger: GCTCTCATTGAGAGCAATCAAACTGCCAGGTGGAAA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAACCATTCCTTGGAATTaGTTAGCAGGTCGAGGTATG +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVTIPWN*LAGRGM
Trigger: CATACCTCGACCTGCTAACAAATTCCAAGGAATGGT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEELLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTACTGAGTTCCAGTTaGCTGACCAGAGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHALLSSS*LTRGLC
Trigger: ACAGAGACCTCTGGTCAGCAAACTGGAACTCAGTAA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTACAGCTTGCAACATGTTaGTACAGTCGGGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVQLATC*YSRAFH
Trigger: ATGAAAAGCCCGACTGTACAAACATGTTGCAAGCTG...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS TCA 90 bp ACACTGTGTCAGGCACCATTGCTAGAACTATTACATATATGCCAATaGATAAAGCAGCAAAGTGCAGCATACTCACATCAACAATCAGGA +
Preference number: 5 (lower is better)
Translates to: TLCQAPLLELLHICQ*IKQQSAAYSHQQSG
Trigger: TCCTGATTGTTGATGTGAGTATGCTGCACTTTGCTGCTTTATTCATTGGCATATATGTAATAGTTCTAGCAATGGTGCCTGACACAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480032.4
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTTACACCCAGAGTTaGGGATTGATAAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAFYTQS*GLISWH
Trigger: GTGCCAGCTTATCAATCCCAAACTCTGGGTGTAAAA...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283256.10
ENST00000636662.2
CDS-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIASSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACAGTTCTTCCATGGTGTaGGTCAAAATACTGGCTATA +
Preference number: 5 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNSSSMV*VKILAI
Trigger: TATAGCCAGTATTTTGACCAACACCATGGAAGAACT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636662.2
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLSMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGCATTTAGCTTCTCTTaGCTTTCCTCCATATCTGAC +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVAFSFS*LSSISD
Trigger: GTCAGATATGGAGGAAAGCAAAGAGAAGCTAAATGC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCACCATTCCTTGGAATTaGTTAGCAGGTCGAGGTATG +
Preference number: 5 (lower is better)
Translates to: QDKHAAVTASNYNGTNYITIPWN*LAGRGM
Trigger: CATACCTCGACCTGCTAACAAATTCCAAGGAATGGT...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAACCATTCCTTGGAATTaGTTAGCAGGTCGAGGTATG +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHATIPWN*LAGRGM
Trigger: CATACCTCGACCTGCTAACAAATTCCAAGGAATGGT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAACCATTCCTTGGAATTaGTTAGCAGGTCGAGGTATG +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVTIPWN*LAGRGM
Trigger: CATACCTCGACCTGCTAACAAATTCCAAGGAATGGT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTAATGTTTGTCATTTCTaGACTCTGGTCATCGGTTTC +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIANVCHF*TLVIGF
Trigger: GAAACCGATGACCAGAGTCAAGAAATGACAAACATT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACAATGTTTGTCATTTCTaGACTCTGGTCATCGGTTTC +
Preference number: 5 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNNVCHF*TLVIGF
Trigger: GAAACCGATGACCAGAGTCAAGAAATGACAAACATT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTATGAGAGTATCTTCTTaGATGGGTGTTCCATCACAT +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAMRVSS*MGVPSH
Trigger: ATGTGATGGAACACCCATCAAAGAAGATACTCTCAT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACATGAGAGTATCTTCTTaGATGGGTGTTCCATCACAT +
Preference number: 5 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNMRVSS*MGVPSH
Trigger: ATGTGATGGAACACCCATCAAAGAAGATACTCTCAT...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGATGAGAGTATCTTCTTaGATGGGTGTTCCATCACAT +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLMRVSS*MGVPSH
Trigger: ATGTGATGGAACACCCATCAAAGAAGATACTCTCAT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp AATGAGAGCTTTGCACTCACTGTAGTTGTTGACCACGCTTACATCAAACATCTCTTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 5 (lower is better)
Translates to: NESFALTVVVDHAYIKHLLPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...GAGATGTTTGATGTAAGCGTGGTCAACAACTACAGTGAGTGCAAAGCTCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLSGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TCACAAATGCAGGTTCAAATGAGTGCTTCCAAAAGACTTCTAGGATCATTGGTCATACCTTCCATGGTGTaGGTCAAAATACTGGCTATA +
Preference number: 5 (lower is better)
Translates to: SQMQVQMSASKRLLGSLVIPSMV*VKILAI
Trigger: TATAGCCAGTATTTTGACCAACACCATGGAAGGTAT...GACCAATGATCCTAGAAGTCTTTTGGAAGCACTCATTTGAACCTGCATTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CAA 90 bp CCAAGTAACTGTGACGCAGGACTTTTAACATACCTTCCATGGTGTTGGTCAAAAGAAGTTGACAGTTGTTaGAATTCACTTACAGTATGG +
Preference number: 5 (lower is better)
Translates to: PSNCDAGLLTYLPWCWSKEVDSC*NSLTVW
Trigger: CCATACTGTAAGTGAATTCAAACAACTGTCAACTTC...TTTTGACCAACACCATGGAAGGTATGTTAAAAGTCCTGCGTCACAGTTACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CAA 90 bp ATCCATTCAACAACCTTATGCCTAAACATCATCATCCACATTTTACTGATGAGGCTTTTCTCTTCTCCCTaGACACATCTACACACACTC +
Preference number: 5 (lower is better)
Translates to: IHSTTLCLNIIIHILLMRLFSSP*THLHTL
Trigger: GAGTGTGTGTAGATGTGTCAAGGGAGAAGAGAAAAG...CCTCATCAGTAAAATGTGGATGATGATGTTTAGGCATAAGGTTGTTGAATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAAAGGTGAATAGGCTTTaGTCCTTCCTTAATTCCCGC +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAKVNRL*SFLNSR
Trigger: GCGGGAATTAAGGAAGGACAAAAGCCTATTCACCTT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636662.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAATGCTCACTGTCCTATaGAAAGTAGTACCATTCCCA +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAMLTVL*KVVPFP
Trigger: TGGGAATGGTACTACTTTCAATAGGACAGTGAGCAT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTATGCTCACTGTCCTATaGAAAGTAGTACCATTCCCA +
Preference number: 5 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSMLTVL*KVVPFP
Trigger: TGGGAATGGTACTACTTTCAATAGGACAGTGAGCAT...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636135.1
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAATGCTCACTGTCCTATaGAAAGTAGTACCATTCCCA +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEMLTVL*KVVPFP
Trigger: TGGGAATGGTACTACTTTCAATAGGACAGTGAGCAT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAGTTCTTCCATGGTGTaGGTCAAAATACTGGCTATA +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVSSSMV*VKILAI
Trigger: TATAGCCAGTATTTTGACCAACACCATGGAAGAACT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636662.2
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVSMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAGCATTTAGCTTCTCTTaGCTTTCCTCCATATCTGAC +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVAFSFS*LSSISD
Trigger: GTCAGATATGGAGGAAAGCAAAGAGAAGCTAAATGC...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAAATGTTTGTCATTTCTaGACTCTGGTCATCGGTTTC +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVNVCHF*TLVIGF
Trigger: GAAACCGATGACCAGAGTCAAGAAATGACAAACATT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGTACCTTTTTAACTTTTaGCTTCAAGAGGTAGCGTCT +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLYLFNF*LQEVAS
Trigger: AGACGCTACCTCTTGAAGCAAAAAGTTAAAAAGGTA...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCATTTCACCAACCGGTTTTCTCTGGAGTaGAATTCTCATTCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: CGLPFFMVTAFSCMHFTNRFSLE*NSHSVY
Trigger: ATAAACTGAATGAGAATTCAACTCCAGAGAAAACCG...GTTGGTGAAATGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTCGGTTTTCTCTGGAGTaGAATTCTCATTCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIARFSLE*NSHSVY
Trigger: ATAAACTGAATGAGAATTCAACTCCAGAGAAAACCG...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGCGGTTTTCTCTGGAGTaGAATTCTCATTCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLRFSLE*NSHSVY
Trigger: ATAAACTGAATGAGAATTCAACTCCAGAGAAAACCG...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATGGTGGGGATGTTTTTaGGTCAATTCAGGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVWWGCF*VNSGFL
Trigger: TAAGAAGCCTGAATTGACCAAAAAACATCCCCACCA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGAATCATCATTTTTGTTaGCTCAAACATGCACCACTG +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLNHHFC*LKHAPL
Trigger: CAGTGGTGCATGTTTGAGCAAACAAAAATGATGATT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GGTTGGAAGAATAAAAAGCAAGAAGCTCTTCCTTGTTTGCTGCAACCTATTGCTGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: GWKNKKQEALPCLLQPIAVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...AGCAATAGGTTGCAGCAAACAAGGAAGAGCTTCTTGCTTTTTATTCTTCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVSGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATAGAAACCTCCCATCGATACTATTTCTCCAGTTTACTGAGTTCCAGTTTGCTGGAATCCACGTATGTGTaGAATATAACAGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: IETSHRYYFSSLLSSSLLESTYV*NITVSN
Trigger: ATTGGAGACTGTTATATTCAACACATACGTGGATTC...CAGCAAACTGGAACTCAGTAAACTGGAGAAATAGTATCGATGGGAGGTTTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636985.2
CDS CCA 90 bp CCAAGATCCAATGACTTTGTTACAATTGCAGTAGAGTTAAAACACTaGCTGATTGTGACCATAATTCCTATAATTCTCAGCCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: PRSNDFVTIAVELKH*LIVTIIPIILSLQS
Trigger: AGACTGAAGGCTGAGAATTATAGGAATTATGGTCACAATCAGCCAGTGTTTTAACTCTACTGCAATTGTAACAAAGTCATTGGATCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS-3UTR CAA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAATGCTCACTGTCCTATaGAAAGTAGTACCATTCCCA +
Preference number: 5 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTMLTVL*KVVPFP
Trigger: TGGGAATGGTACTACTTTCAATAGGACAGTGAGCAT...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CATGGAAACATGATAAGAACTGGACCGTCTCTTTCTTATTTCTGTTTCAGTAGTAGCTCTTTTTCACTTTaGGAGCTCAACTTAGATGCT +
Preference number: 5 (lower is better)
Translates to: HGNMIRTGPSLSYFCFSSSSFSL*ELNLDA
Trigger: AGCATCTAAGTTGAGCTCCAAAAGTGAAAAAGAGCT...ACTACTGAAACAGAAATAAGAAAGAGACGGTCCAGTTCTTATCATGTTTCCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636135.1
ENST00000636662.2
ENST00000637367.1
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAGTTCTTCCATGGTGTaGGTCAAAATACTGGCTATA +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHSSSMV*VKILAI
Trigger: TATAGCCAGTATTTTGACCAACACCATGGAAGAACT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636662.2
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAAGTTCTTCCATGGTGTaGGTCAAAATACTGGCTATA +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVSSSMV*VKILAI
Trigger: TATAGCCAGTATTTTGACCAACACCATGGAAGAACT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636662.2
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATCTATGGTGGTATGGTaGGAAATACAGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEESMVVW*EIQLSF
Trigger: AAAAGACAGCTGTATTTCCAACCATACCACCATAGA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAAAATGTTTGTCATTTCTaGACTCTGGTCATCGGTTTC +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEENVCHF*TLVIGF
Trigger: GAAACCGATGACCAGAGTCAAGAAATGACAAACATT...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACAATGTTTGTCATTTCTaGACTCTGGTCATCGGTTTC +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHNVCHF*TLVIGF
Trigger: GAAACCGATGACCAGAGTCAAGAAATGACAAACATT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAAATGTTTGTCATTTCTaGACTCTGGTCATCGGTTTC +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHANVCHF*TLVIGF
Trigger: GAAACCGATGACCAGAGTCAAGAAATGACAAACATT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATACCTTTTTAACTTTTaGCTTCAAGAGGTAGCGTCT +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVYLFNF*LQEVAS
Trigger: AGACGCTACCTCTTGAAGCAAAAAGTTAAAAAGGTA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTGATTGTAATGTGGTTTACCGTTCTTTATGGTAACAGCATTTTCCTGCATGCAATGAGAGTATCTTCTTaGATGGGTGTTCCATCACAT +
Preference number: 5 (lower is better)
Translates to: LIVMWFTVLYGNSIFLHAMRVSS*MGVPSH
Trigger: ATGTGATGGAACACCCATCAAAGAAGATACTCTCAT...TGCATGCAGGAAAATGCTGTTACCATAAAGAACGGTAAACCACATTACAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTAATGAGAGTATCTTCTTaGATGGGTGTTCCATCACAT +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVMRVSS*MGVPSH
Trigger: ATGTGATGGAACACCCATCAAAGAAGATACTCTCAT...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACATGAGAGTATCTTCTTaGATGGGTGTTCCATCACAT +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHMRVSS*MGVPSH
Trigger: ATGTGATGGAACACCCATCAAAGAAGATACTCTCAT...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTACGGTTTTCTCTGGAGTaGAATTCTCATTCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVRFSLE*NSHSVY
Trigger: ATAAACTGAATGAGAATTCAACTCCAGAGAAAACCG...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTATTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVLPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp GACACTTATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: DTYQKCDSHAAGTVNDNVVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...TACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTATCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVSGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACTCGGGCTTTTCATCATaGAGTGTTCAATTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHSGFSS*SVQLRL
Trigger: CAACCTTAATTGAACACTCAATGATGAAAAGCCCGA...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TCTTATGCTGTCTTCAGATTCCGATTTTCGGACTCTGTCATTTTTCTCTTCTTCGAATCCACGTATGTGTaGAATATAACAGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: SYAVFRFRFSDSVIFLFFESTYV*NITVSN
Trigger: ATTGGAGACTGTTATATTCAACACATACGTGGATTC...GAAGAAGAGAAAAATGACAGAGTCCGAAAATCGGAATCTGAAGACAGCATAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637367.1
CDS TCA 90 bp CTATCTTGTGAAATAGTTGCAGTAGGGTTGGTACCAATTCTTCTTTaGATGTCTAGGTATATACCCAGAAGTAGAATTACTGGATCATAC +
Preference number: 5 (lower is better)
Translates to: LSCEIVAVGLVPILL*MSRYIPRSRITGSY
Trigger: GTATGATCCAGTAATTCTACTTCTGGGTATATACCTAGACATTCAAAGAAGAATTGGTACCAACCCTACTGCAACTATTTCACAAGATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTACCTTTTTAACTTTTaGCTTCAAGAGGTAGCGTCT +
Preference number: 5 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIYLFNF*LQEVAS
Trigger: AGACGCTACCTCTTGAAGCAAAAAGTTAAAAAGGTA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATACCTTTTTAACTTTTaGCTTCAAGAGGTAGCGTCT +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEEYLFNF*LQEVAS
Trigger: AGACGCTACCTCTTGAAGCAAAAAGTTAAAAAGGTA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAATGAGAGTATCTTCTTaGATGGGTGTTCCATCACAT +
Preference number: 5 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTMRVSS*MGVPSH
Trigger: ATGTGATGGAACACCCATCAAAGAAGATACTCTCAT...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS-3UTR CAA 90 bp TATCAAAAATGTGATAGTCATGCTGCTGGGACTGTGAATGACAATGTAATGGTACGGTTTTCTCTGGAGTaGAATTCTCATTCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: YQKCDSHAAGTVNDNVMVRFSLE*NSHSVY
Trigger: ATAAACTGAATGAGAATTCAACTCCAGAGAAAACCG...TACCATTACATTGTCATTCACAGTCCCAGCAGCATGACTATCACATTTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCTTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 5 (lower is better)
Translates to: QDKHAAVTASNYNGTNYILPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp ATGTTTGTACAGTCGGGCTTTTCATCATTGAGTGTTCAATTAAGGTTGGAAGAATTACCTGTTGAAAGCTaGCAAACTATACTTACTGTG +
Preference number: 5 (lower is better)
Translates to: MFVQSGFSSLSVQLRLEELPVES*QTILTV
Trigger: CACAGTAAGTATAGTTTGCAAGCTTTCAACAGGTAA...TTCTTCCAACCTTAATTGAACACTCAATGATGAAAAGCCCGACTGTACAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CTTAATGACATGAAGAATGAGGTCTTGGTAGAACAATTTGCTTCACTTTACCACGTTTGCTGCAACCTATaGCTTAATGACATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: LNDMKNEVLVEQFASLYHVCCNL*LNDMKN
Trigger: ATTCTTCATGTCATTAAGCAATAGGTTGCAGCAAAC...GTGGTAAAGTGAAGCAAATTGTTCTACCAAGACCTCATTCTTCATGTCATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000283256.10
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
ENST00000636985.2
ENST00000637266.2
CDS-3UTR CAA 90 bp CAAGATAAACATGCAGCAGTGACAGCTTCAAACTATAATGGAACCAATTACATCGAATCCACGTATGTGTaGAATATAACAGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: QDKHAAVTASNYNGTNYIESTYV*NITVSN
Trigger: ATTGGAGACTGTTATATTCAACACATACGTGGATTC...GATGTAATTGGTTCCATTATAGTTTGAAGCTGTCACTGCTGCATGTTTATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375437.7
ENST00000636071.2
ENST00000636135.1
ENST00000636384.2
ENST00000636985.2
CDS TCA 90 bp ACTTTGGGTAATATGATCATTAGCTGCAGGACAACTAGATTTCTCTaGAGAGTTTCCTTATATTCAAGCAGTGCTGACTTGATACTTTTA +
Preference number: 5 (lower is better)
Translates to: TLGNMIISCRTTRFL*RVSLYSSSADLILL
Trigger: TAAAAGTATCAAGTCAGCACTGCTTGAATATAAGGAAACTCTTCAGAGAAATCTAGTTGTCCTGCAGCTAATGATCATATTACCCAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480032.4
CDS-3UTR CAA 90 bp TTTGAGATAATTGAGGTCTTTGCCTATTTCTATGGTGGTATGGTTGGAAATACAATGAAGAATGAGGTCTaGGTAGAACAATTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: FEIIEVFAYFYGGMVGNTMKNEV*VEQFAS
Trigger: TGAAGCAAATTGTTCTACCAAGACCTCATTCTTCAT...TGTATTTCCAACCATACCACCATAGAAATAGGCAAAGACCTCAATTATCTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636135.1
ENST00000636384.2
ENST00000636662.2
ENST00000636769.1
CDS GCA 72 bp CAGCCCATGGAAGTAGTCAGGAGGGAAGCTGTACCCTaGAAAGTGACAGGGGTGGAGCTGCTGAAGACCAAG +
Preference number: 6 (lower is better)
Translates to: QPMEVVRREAVP*KVTGVELLKTK
Trigger: CTTGGTCTTCAGCAGCTCCACCCCTGTCACTTTGCAGGGTACAGCTTCCCTCCTGACTACTTCCATGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS CAA 72 bp GGGGTGGAGCTGCTGAAGACCAAGGGAACCCACCTCTaGCATCAGCGTAACCTGGTGTGGAGAAGAAAATCT +
Preference number: 6 (lower is better)
Translates to: GVELLKTKGTHL*HQRNLVWRRKS
Trigger: AGATTTTCTTCTCCACACCAGGTTACGCTGATGCAAGAGGTGGGTTCCCTTGGTCTTCAGCAGCTCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS CAA 90 bp GCCAGCAGAAATCGTTCAAAAGGCCTTTGGACTCAGAATATTGGCTaGCCTCTGAGGCTGCAATCAGAAGGCTCAGCCCTGAGCTTTGGC +
Preference number: 6 (lower is better)
Translates to: ASRNRSKGLWTQNIG*PLRLQSEGSALSFG
Trigger: GCCAAAGCTCAGGGCTGAGCCTTCTGATTGCAGCCTCAGAGGCAAGCCAATATTCTGAGTCCAAAGGCCTTTTGAACGATTTCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638151.1
CDS GCA 72 bp TGCTCAGTAAGGACTGGAAAAGCCACAGACATTCAATaGCAGCCCATGGAAGTAGTCAGGAGGGAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: CSVRTGKATDIQ*QPMEVVRREAV
Trigger: TACAGCTTCCCTCCTGACTACTTCCATGGGCTGGCATTGAATGTCTGTGGCTTTTCCAGTCCTTACTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636135.1
CDS CAA 72 bp CATCTCTCAAGCTCCAGCTCACACTCCACTTCCCTATaGAAGCCTTTCCTCCTTCCTCAAGTAAAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: HLSSSSSHSTSL*KPFLLPQVKRW
Trigger: CCACCTCTTTACTTGAGGAAGGAGGAAAGGCTTCAATAGGGAAGTGGAGTGTGAGCTGGAGCTTGAGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480032.4
CDS CAA 90 bp GCAAGGGATTCCCATCATAGCCAGCAGAAATCGTTCAAAAGGCCTTaGGACTCAGAATATTGGCTTGCCTCTGAGGCTGCAATCAGAAGG +
Preference number: 6 (lower is better)
Translates to: ARDSHHSQQKSFKRP*DSEYWLASEAAIRR
Trigger: CCTTCTGATTGCAGCCTCAGAGGCAAGCCAATATTCTGAGTCCAAAGGCCTTTTGAACGATTTCTGCTGGCTATGATGGGAATCCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638151.1
CDS CAA 90 bp GCCAGGCTGGGTAAGCTGAGACACGCTAACCATGTTTACACTGTCTaGCTGACTCTCTTTCAGTTGACAGAATTCCCATCGAGTATCTCC +
Preference number: 6 (lower is better)
Translates to: ARLGKLRHANHVYTV*LTLFQLTEFPSSIS
Trigger: GGAGATACTCGATGGGAATTCTGTCAACTGAAAGAGAGTCAGCAAGACAGTGTAAACATGGTTAGCGTGTCTCAGCTTACCCAGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CCA 72 bp CAGAAATCGTTCAAAAGGCCTTTGGACTCAGAATATTaGCTTGCCTCTGAGGCTGCAATCAGAAGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: QKSFKRPLDSEY*LASEAAIRRLS
Trigger: GCTGAGCCTTCTGATTGCAGCCTCAGAGGCAAGCCAATATTCTGAGTCCAAAGGCCTTTTGAACGATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638151.1
CDS CCA 72 bp CCCATCATAGCCAGCAGAAATCGTTCAAAAGGCCTTTaGACTCAGAATATTGGCTTGCCTCTGAGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: PIIASRNRSKGL*TQNIGLPLRLQ
Trigger: TTGCAGCCTCAGAGGCAAGCCAATATTCTGAGTCCAAAGGCCTTTTGAACGATTTCTGCTGGCTATGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638151.1
CDS CAA 72 bp TCCCATCATAGCCAGCAGAAATCGTTCAAAAGGCCTTaGGACTCAGAATATTGGCTTGCCTCTGAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: SHHSQQKSFKRP*DSEYWLASEAA
Trigger: TGCAGCCTCAGAGGCAAGCCAATATTCTGAGTCCAAAGGCCTTTTGAACGATTTCTGCTGGCTATGATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638151.1
CDS CAA 90 bp TTGATCGAGAAGGAGTTGCAGAAGCTGAAGAGGACTCCAAGATTCTaGTTTGGGAAACTTGATACACAGGAAACAGAAACCTTCCCTGGC +
Preference number: 6 (lower is better)
Translates to: LIEKELQKLKRTPRF*FGKLDTQETETFPG
Trigger: GCCAGGGAAGGTTTCTGTTTCCTGTGTATCAAGTTTCCCAAACAAGAATCTTGGAGTCCTCTTCAGCTTCTGCAACTCCTTCTCGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CCA 72 bp ATTACAAAGGCTTACCTCACCCTATCTACTTGTTTCTaGAACCCGCCCTGCATGTCATGCACCAACGTTTTA +
Preference number: 6 (lower is better)
Translates to: ITKAYLTLSTCF*NPPCMSCTNVL
Trigger: TAAAACGTTGGTGCATGACATGCAGGGCGGGTTCCAGAAACAAGTAGATAGGGTGAGGTAAGCCTTTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480032.4
CDS CAA 72 bp AAGAAAGTGCCCTGTAGAATCTTTTACACCCAGAGTTaGGGATTGATAAGCTGGCACCAAGAAGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: KKVPCRIFYTQS*GLISWHQEDCS
Trigger: GCTGCAGTCTTCTTGGTGCCAGCTTATCAATCCCAAACTCTGGGTGTAAAAGATTCTACAGGGCACTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283256.10
ENST00000480032.4
ENST00000636662.2
CDS CAA 72 bp CTGTGGAATTCTGGATCTCCTTTAGCCTCAAAAGAATaGAGCACTGAACAGCATCCCCTTCCTGTCCTTATG +
Preference number: 6 (lower is better)
Translates to: LWNSGSPLASKE*STEQHPLPVLM
Trigger: CATAAGGACAGGAAGGGGATGCTGTTCAGTGCTCAATTCTTTTGAGGCTAAAGGAGATCCAGAATTCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS TCA 72 bp GCTCCTTGCATAAGAAAGTGCTGGTCTATGCCATCCTaGTATGTTCACACTAGAGGTGAATTGTGTTACTGC +
Preference number: 6 (lower is better)
Translates to: APCIRKCWSMPS*YVHTRGELCYC
Trigger: GCAGTAACACAATTCACCTCTAGTGTGAACATATCAGGATGGCATAGACCAGCACTTTCTTATGCAAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637266.2
CDS CCA 72 bp GTCCAGCAGAACAGTAGTATTCCTCCAATCACTGTCTaGGAAATAATGGTCTGTGGAATTCTGGATCTCCTT +
Preference number: 6 (lower is better)
Translates to: VQQNSSIPPITV*EIMVCGILDLL
Trigger: AAGGAGATCCAGAATTCCACAGACCATTATTTCCCAGACAGTGATTGGAGGAATACTACTGTTCTGCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CCA 72 bp CTCTGGGAGAAGGAGGGATTGACAGGAAAAGGGTACTaGGGTGATAGAAATATTCTACATCTTAATTGGAGC +
Preference number: 6 (lower is better)
Translates to: LWEKEGLTGKGY*GDRNILHLNWS
Trigger: GCTCCAATTAAGATGTAGAATATTTCTATCACCCCAGTACCCTTTTCCTGTCAATCCCTCCTTCTCCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CAA 72 bp TTCTGCAGCACCTATCTTCAACCAATGAAGGGTCTCTaGCCATCGTGTCTGGAAACACTAGATTTCCAATCA +
Preference number: 6 (lower is better)
Translates to: FCSTYLQPMKGL*PSCLETLDFQS
Trigger: TGATTGGAAATCTAGTGTTTCCAGACACGATGGCAAGAGACCCTTCATTGGTTGAAGATAGGTGCTGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673883.1
CDS CAA 90 bp GCAGTTCTGAGTTTCCGTCAATACAATTTGAAGTTTGACTGCATGTaGATCGAGAAGGAGTTGCAGAAGCTGAAGAGGACTCCAAGATTC +
Preference number: 6 (lower is better)
Translates to: AVLSFRQYNLKFDCM*IEKELQKLKRTPRF
Trigger: GAATCTTGGAGTCCTCTTCAGCTTCTGCAACTCCTTCTCGATCAACATGCAGTCAAACTTCAAATTGTATTGACGGAAACTCAGAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS TCA 72 bp CCTGTGCCTTCTTCAAGTCTTTCCACTGCCATTTCATaGCAGGTGAATGCAAGAAAATGCATTCACCTTAGA +
Preference number: 6 (lower is better)
Translates to: PVPSSSLSTAIS*QVNARKCIHLR
Trigger: TCTAAGGTGAATGCATTTTCTTGCATTCACCTGTCATGAAATGGCAGTGGAAAGACTTGAAGAAGGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635945.1
CDS GCA 72 bp TTAAGGCTGAAGAGTATTTCATTGTGTGTGTGTGTGTaGGTGTGTGTGTGTGTGCAATTCTTTATCCGTTCC +
Preference number: 6 (lower is better)
Translates to: LRLKSISLCVCV*VCVCVQFFIRS
Trigger: GGAACGGATAAAGAATTGCACACACACACACACGCACACACACACACACAATGAAATACTCTTCAGCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CAA 90 bp AGACACGCTAACCATGTTTACACTGTCTTGCTGACTCTCTTTCAGTaGACAGAATTCCCATCGAGTATCTCCTATGTACTATCTCCATGT +
Preference number: 6 (lower is better)
Translates to: RHANHVYTVLLTLFQ*TEFPSSISYVLSPC
Trigger: ACATGGAGATAGTACATAGGAGATACTCGATGGGAATTCTGTCAACTGAAAGAGAGTCAGCAAGACAGTGTAAACATGGTTAGCGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS GCA 72 bp GTTCTGAGTTTCCGTCAATACAATTTGAAGTTTGACTaGATGTTGATCGAGAAGGAGTTGCAGAAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: VLSFRQYNLKFD*MLIEKELQKLK
Trigger: CTTCAGCTTCTGCAACTCCTTCTCGATCAACATGCAGTCAAACTTCAAATTGTATTGACGGAAACTCAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CAA 90 bp CAAGTGACAGAATTTCCTTCTTTGTTAAGGCTGAAGAGTATTTCATaGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGCAATTCTTTATC +
Preference number: 6 (lower is better)
Translates to: QVTEFPSLLRLKSIS*CVCVCVCVCVQFFI
Trigger: GATAAAGAATTGCACACACACACACACGCACACACACACACACAATGAAATACTCTTCAGCCTTAACAAAGAAGGAAATTCTGTCACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS GCA 72 bp TCTGACTTAGTAAGTTTGGGGAAAGGCCTAAGAATTTaGATTTCTACAGGTTCCCAGGGTGAAGTTAATGAT +
Preference number: 6 (lower is better)
Translates to: SDLVSLGKGLRI*ISTGSQGEVND
Trigger: ATCATTAACTTCACCCTGGGAACCTGTAGAAATGCAAATTCTTAGGCCTTTCCCCAAACTTACTAAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480032.4
CDS GCA 72 bp GAAAAACTTACCGTCTCCCCCAGTAAAGTGACCATTTaGATTCTATATATTCATTACCAGGCTGACACTCAT +
Preference number: 6 (lower is better)
Translates to: EKLTVSPSKVTI*ILYIHYQADTH
Trigger: ATGAGTGTCAGCCTGGTAATGAATATATAGAATGCAAATGGTCACTTTACTGGGGGAGACGGTAAGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CAA 72 bp AACCATGTTTACACTGTCTTGCTGACTCTCTTTCAGTaGACAGAATTCCCATCGAGTATCTCCTATGTACTA +
Preference number: 6 (lower is better)
Translates to: NHVYTVLLTLFQ*TEFPSSISYVL
Trigger: TAGTACATAGGAGATACTCGATGGGAATTCTGTCAACTGAAAGAGAGTCAGCAAGACAGTGTAAACATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS TCA 72 bp CAGGCACCATTGCTAGAACTATTACATATATGCCAATaGATAAAGCAGCAAAGTGCAGCATACTCACATCAA +
Preference number: 6 (lower is better)
Translates to: QAPLLELLHICQ*IKQQSAAYSHQ
Trigger: TTGATGTGAGTATGCTGCACTTTGCTGCTTTATTCATTGGCATATATGTAATAGTTCTAGCAATGGTGCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480032.4
CDS CAA 72 bp ACACGACAGTGTAAATATCTCTTTATCACACTAATTTaGTCACCTTGTCTTGTTCCAGTTCTCAGGGGGAAT +
Preference number: 6 (lower is better)
Translates to: TRQCKYLFITLI*SPCLVPVLRGN
Trigger: ATTCCCCCTGAGAACTGGAACAAGACAAGGTGACAAAATTAGTGTGATAAAGAGATATTTACACTGTCGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CAA 72 bp ATATCCAGAACTTATTCCTCCTGTTTAACTGAACTTTaGTACCCTTTGACCAACATTTTCCATTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: ISRTYSSCLTEL*YPLTNIFHSST
Trigger: GGTGGAGGAATGGAAAATGTTGGTCAAAGGGTACAAAAGTTCAGTTAAACAGGAGGAATAAGTTCTGGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CAA 72 bp CCTAAGTTACATCATGCAATATTTGTCATTCTGTGCTaGGCTTATTTTACTCAACCTAATGTCCTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: PKLHHAIFVILC*AYFTQPNVLQV
Trigger: AACCTGGAGGACATTAGGTTGAGTAAAATAAGCCAAGCACAGAATGACAAATATTGCATGATGTAACTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CAA 90 bp GATTCCATACCTAAGTTACATCATGCAATATTTGTCATTCTGTGCTaGGCTTATTTTACTCAACCTAATGTCCTCCAGGTTCATTCATGT +
Preference number: 6 (lower is better)
Translates to: DSIPKLHHAIFVILC*AYFTQPNVLQVHSC
Trigger: ACATGAATGAACCTGGAGGACATTAGGTTGAGTAAAATAAGCCAAGCACAGAATGACAAATATTGCATGATGTAACTTAGGTATGGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CAA 90 bp ACAATCTTAGAAGGTAGATCAGGGAGGTATAAACATCCTCATCTTTaGGATAAAGAAATTGAGTTTTTAATAAGGCTACGTCACTGGCCA +
Preference number: 6 (lower is better)
Translates to: TILEGRSGRYKHPHL*DKEIEFLIRLRHWP
Trigger: TGGCCAGTGACGTAGCCTTATTAAAAACTCAATTTCTTTATCCAAAAGATGAGGATGTTTATACCTCCCTGATCTACCTTCTAAGATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS TCA 72 bp ATTCTATATATTCATTACCAGGCTGACACTCATGAGTaGCATTTTCCGTTTATTTTTCTCACTCCCAACCAA +
Preference number: 6 (lower is better)
Translates to: ILYIHYQADTHE*HFPFIFLTPNQ
Trigger: TTGGTTGGGAGTGAGAAAAATAAACGGAAAATGTCACTCATGAGTGTCAGCCTGGTAATGAATATATAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CCA 72 bp GCTTCCTCTGTATTAAATAATAAGTCCAAATTTCCTTaGATGGCATCTCAGGTTCTTCAGATCTTTTCTAAC +
Preference number: 6 (lower is better)
Translates to: ASSVLNNKSKFP*MASQVLQIFSN
Trigger: GTTAGAAAAGATCTGAAGAACCTGAGATGCCATCCAAGGAAATTTGGACTTATTATTTAATACAGAGGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480032.4
CDS CAA 72 bp CAAATAAGTGACAGATGCAAGACTGCAACTAGCATTTaGACTCCTGCTCCCAAAAAGGATTTATTCTATATT +
Preference number: 6 (lower is better)
Translates to: QISDRCKTATSI*TPAPKKDLFYI
Trigger: AATATAGAATAAATCCTTTTTGGGAGCAGGAGTCAAAATGCTAGTTGCAGTCTTGCATCTGTCACTTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS CAA 72 bp CATATGTCAGATTCATGTGATTTCTACCCCACCATATaGCTGCACCAGTTTAATCTACAAATGAAAACAGAA +
Preference number: 6 (lower is better)
Translates to: HMSDSCDFYPTI*LHQFNLQMKTE
Trigger: TTCTGTTTTCATTTGTAGATTAAACTGGTGCAGCAATATGGTGGGGTAGAAATCACATGAATCTGACATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640791.1
CDS TCA 72 bp TCTTTGCTGGCTATAAAATCCACCTTAGTAATCATGTaGAAATTGGCTCCCACATTTCATTCTATTGTTACT +
Preference number: 6 (lower is better)
Translates to: SLLAIKSTLVIM*KLAPTFHSIVT
Trigger: AGTAACAATAGAATGAAATGTGGGAGCCAATTTTCACATGATTACTAAGGTGGATTTTATAGCCAGCAAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480032.4
CDS CCA 72 bp AATGACTTTGTTACAATTGCAGTAGAGTTAAAACACTaGCTGATTGTGACCATAATTCCTATAATTCTCAGC +
Preference number: 6 (lower is better)
Translates to: NDFVTIAVELKH*LIVTIIPIILS
Trigger: GCTGAGAATTATAGGAATTATGGTCACAATCAGCCAGTGTTTTAACTCTACTGCAATTGTAACAAAGTCATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640791.1