RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCN1A (Homo sapiens)

Ensembl gene IDs: ENSG00000144285

Ensembl transcript IDs: ENST00000303395.9, ENST00000375405.7, ENST00000507401.2, ENST00000635750.1, ENST00000635776.1, ENST00000635893.1, ENST00000636194.1, ENST00000636759.1, ENST00000637038.1, ENST00000637968.1, ENST00000637988.1, ENST00000640036.1, ENST00000641575.1, ENST00000641603.1, ENST00000641996.1, ENST00000642141.1, ENST00000671940.1, ENST00000673490.1, ENST00000674923.1

Found 1953 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTAGCTGGGAGGGCCATGTGGTTGCCA +
Preference number: 1 (lower is better)
Translates to: CDFFSCMISKCSMPS*KPRLCVAGRAMWLP
Trigger: TGGCAACCACATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR TCA 90 bp CTGGCTTCCATACTTCTCTTCCTCCTAGAATCACTAGCTATCCTCTaGCACCAGTTCTTCCTCCTAACAGAGAACACACCTGCTGCTTGT +
Preference number: 1 (lower is better)
Translates to: LASILLFLLESLAIL*HQFFLLTENTPAAC
Trigger: ACAAGCAGCAGGTGTGTTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGGAAGAGAAGTATGGAAGCCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR TCA 90 bp CCATTTTTGCAATGTGTAGAAGTCACCCTTCTGGGACACACAGAATaGTGCAGAAGCAGAGAGAGTGGCTCTGGAGGAGCAAACACAGTA +
Preference number: 1 (lower is better)
Translates to: PFLQCVEVTLLGHTE*CRSRESGSGGANTV
Trigger: TACTGTGTTTGCTCCTCCAGAGCCACTCTCTCTGCTTCTGCATCATTCTGTGTGTCCCAGAAGGGTGACTTCTACACATTGCAAAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR CCA 90 bp TGCTCAACTTGCCCCAGATTTGGCCAGTGGGAAGCCCCTTCTAGTTaGTTCCTGTGTCTTACTGACATGACCTCATCATTCTTTGAAGAA +
Preference number: 1 (lower is better)
Translates to: CSTCPRFGQWEAPSS*FLCLTDMTSSFFEE
Trigger: TTCTTCAAAGAATGATGAGGTCATGTCAGTAAGACACAGGAACCAACTAGAAGGGGCTTCCCACTGGCCAAATCTGGGGCAAGTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR GCA 90 bp AAATATTCCTATGTCAATCTTCTCTCTCTGGTGCTTTCCCACTGGTaGTTCTCATTGGCCAAACCAATTGGGAGCTCAAAGGTAGGAGAG +
Preference number: 1 (lower is better)
Translates to: KYSYVNLLSLVLSHW*FSLAKPIGSSKVGE
Trigger: CTCTCCTACCTTTGAGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGACATAGGAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR GCA 90 bp AGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTaGTTTCCCACTGGTGCTTCTCATTGGCCAAACCAATTGGGAGCT +
Preference number: 1 (lower is better)
Translates to: RNWRRNIPMSIFSLW*FPTGASHWPNQLGA
Trigger: AGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR CCA 90 bp TTTCGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTaGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCTTT +
Preference number: 1 (lower is better)
Translates to: FRGGMSPVPTQQRRN*RRNIPMSIFSLWCF
Trigger: AAAGCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAAGGAGACGTGTaGGAATACAACTTTTATACCTTAGCCACACTAGTTATAACCAAG +
Preference number: 1 (lower is better)
Translates to: CVCVCVREREREGDV*EYNFYTLATLVITK
Trigger: CTTGGTTATAACTAGTGTGGCTAAGGTATAAAAGTTGTATTCTCACACGTCTCCTTCTCTCTCTCTCTCTCTCACACACACACACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR CCA 90 bp ATAGGAGATGTATTTATGATAACCAGAGACAGAGTATGTATAGCTTaGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCTACCTTTTG +
Preference number: 1 (lower is better)
Translates to: IGDVFMITRDRVCIA*LHRGGVLGSYVYLL
Trigger: CAAAAGGTAGACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTCTCTGGTTATCATAAATACATCTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR TCA 90 bp AAATTGAGGAAGTTTATAATGATGTCCTCTTGCTTGTTGCTGAGGTaGGGGGCTGAGTTATCTGCAAATATGAGGAGTGTTCTAACGGAA +
Preference number: 1 (lower is better)
Translates to: KLRKFIMMSSCLLLR*GAELSANMRSVLTE
Trigger: TTCCGTTAGAACACTCCTCATATTTGCAGATAACTCAGCCCCTCACCTCAGCAACAAGCAAGAGGACATCATTATAAACTTCCTCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR TCA 90 bp CATCGAGCAGTCTCATTTCTTTCTATTAGTTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTG +
Preference number: 1 (lower is better)
Translates to: HRAVSFLSISFRQSV*LFTSSMSNLSPVVV
Trigger: CACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAATAATCATACTGATTGCCTAAAACTAATAGAAAGAAATGAGACTGCTCGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR TCA 90 bp GTCTTTAGTGCGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTaGTACAGATATACAAACATACAAACTTATGCAGTAGAGTTGTCT +
Preference number: 1 (lower is better)
Translates to: VFSATSLYSSSVWAL*YRYTNIQTYAVELS
Trigger: AGACAACTCTACTGCATAAGTTTGTATGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCGCACTAAAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATCAGAAGCAGAGAGAGTaGCTCTGGAGGAGCAAACAC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCARALPFSPNQKQRE*LWRSKH
Trigger: GTGTTTGCTCCTCCAGAGCCACTCTCTCTGCTTCTG...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 2 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATTGTCCCTTTTCTGGTTaGGGCTATATTCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCARALPFSPNCPFSG*GYIPSS
Trigger: AGAAGAGGGAATATAGCCTCAACCAGAAAAGGGACA...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATGTTTTGTTGTCAACGTaGGTATGCCTCTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCARALPFSPNVLLST*VCLCVC
Trigger: ACACACACAGAGGCATACCCACGTTGACAACAAAAC...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATATGCAGCAGCAGACCTaGAGGAGCAAGGGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNMQQQT*RSKGRS
Trigger: ACTCCTCCCCTTGCTCCTTCAGGTCTGCTGCTGCAT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATGTTCCTGTGTCTTACTaGCATGACCTCATCATTCTT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCARALPFSPNVPVSY*HDLIIL
Trigger: AAGAATGATGAGGTCATGTCAGTAAGACACAGGAAC...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCTGAGGTCAGAAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPLRSEV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTTCTGACCTCAG...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636759.1
3UTR-3UTR CCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 2 (lower is better)
Translates to: NELEFVWLWQIERRFKRSTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 2 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 2 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR GCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 2 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR GCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 2 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCAACTTGCCCCAGATTTaGCCAGTGGGAAGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTNLPQI*PVGSPF
Trigger: GAAGGGGCTTCCCACTGGCCAAATCTGGGGCAAGTT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 2 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 2 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR CAA 90 bp CTGAAGCAAGGCACATCTTTGCTTCCTGCTGACTTTCATGAGCTGTaGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTG +
Preference number: 2 (lower is better)
Translates to: LKQGTSLLPADFHEL*NHLVSARQETDGML
Trigger: CAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGCTCATGAAAGTCAGCAGGAAGCAAAGATGTGCCTTGCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 2 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR TCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGACCCCCTACCTCCAGTaGCATATCTACCCTAGGTTT +
Preference number: 2 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMTPYLQ*HIYPRF
Trigger: AAACCTAGGGTAGATATGTCACTGGAGGTAGGGGGT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 2 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 2 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 2 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR GCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPRSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR GCA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: PPRITSYPLTPVLPPNREVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATGTTAATTTTACTATCTaGACCACCCGAGTAACCTTT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCARALPFSPNVNFTI*TTRVTF
Trigger: AAAGGTTACTCGGGTGGTCCAGATAGTAAAATTAAC...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATACCCCCTACCTCCAGTaGCATATCTACCCTAGGTTT +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNTPYLQ*HIYPRF
Trigger: AAACCTAGGGTAGATATGTCACTGGAGGTAGGGGGT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCCTGGGACACACAGAATaGTGCAGAAGCAGAGAGAGT +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTLGHTE*CRSRES
Trigger: ACTCTCTCTGCTTCTGCATCATTCTGTGTGTCCCAG...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 2 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGCAAAAGCACTCTCAATaGAGCAGCAGACCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMQKHSQ*SSRPEG
Trigger: TCCTTCAGGTCTGCTGCTGCATTGAGAGTGCTTTTG...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATGGACCGACACCAGGTTaGCAATTTTCCACTTGGCTA +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNGPTPG*QFSTWL
Trigger: TAGCCAAGTGGAAAATTGGCAACCTGGTGTCGGTCC...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 2 (lower is better)
Translates to: CMISKCSMPSCKPRLCVASVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: NELEFVWLWQIERRFKRSAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 2 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 2 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 2 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRTHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRDDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: CMISKCSMPSCKPRLCVASLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCTTGTCAACGTGGGTATaGCTCTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVLSTWV*LCVCVC
Trigger: ACACACACACACACAGAGGCATACCCACGTTGACAA...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR GCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCATCTTCTCTCTCTGGTaGTTTCCCACTGGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVIFSLW*FPTGAS
Trigger: AGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGAT...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 2 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 2 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCCATCCACCATCACTCTaGCTTCCATACTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTHPPSL*LPYFSS
Trigger: GGAAGAGAAGTATGGAAGCCAGAGTGATGGTGGATG...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATCACTGGACTTCACTGTaGTTCCCCCAGTTACTGTTT +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNHWTSL*FPQLLF
Trigger: AAACAGTAACTGGGGGAACCACAGTGAAGTCCAGTG...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAAACTTGCCCCAGATTTaGCCAGTGGGAAGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQNLPQI*PVGSPF
Trigger: GAAGGGGCTTCCCACTGGCCAAATCTGGGGCAAGTT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCAAGGGTGCTGCTCTGTaGAGCTGTGTTTGGAATTAC +
Preference number: 2 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVKGAAL*SCVWNY
Trigger: GTAATTCCAAACACAGCTCCACAGAGCAGCACCCTT...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 2 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCTGGGACACACAGAATaGTGCAGAAGCAGAGAGAGT +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLLGHTE*CRSRES
Trigger: ACTCTCTCTGCTTCTGCATCATTCTGTGTGTCCCAG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGAACTGATTCAAGAATaGGCTGCAGACATTGTTGCA +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWELIQE*AADIVA
Trigger: TGCAACAATGTCTGCAGCTCATTCTTGAATCAGTTC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 2 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: NELEFVWLWQIERRFKRSRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 2 (lower is better)
Translates to: WISQNKINKAPPLITQLPTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAACAGAAGCAGAGAGAGTaGCTCTGGAGGAGCAAACAC +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQQKQRE*LWRSKH
Trigger: GTGTTTGCTCCTCCAGAGCCACTCTCTCTGCTTCTG...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCATTGGCCAAACCAATTaGGAGCTCAAAGGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVIGQTN*ELKGRR
Trigger: TCTCCTACCTTTGAGCTCCCAATTGGTTTGGCCAAT...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCATTGGCCAAACCAATTaGGAGCTCAAAGGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTIGQTN*ELKGRR
Trigger: TCTCCTACCTTTGAGCTCCCAATTGGTTTGGCCAAT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAACAGGCAGGAGACAGATaGCATGCTGAAATGAGGCAT +
Preference number: 2 (lower is better)
Translates to: PPRITSYPLTPVLPPNREQAGDR*HAEMRH
Trigger: ATGCCTCATTTCAGCATGCCATCTGTCTCCTGCCTG...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATCCAGTAAAATACAAATaGGAGGACCGACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNPVKYK*EDRHQV
Trigger: AACCTGGTGTCGGTCCTCCCATTTGTATTTTACTGG...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCCAGTAAAATACAAATaGGAGGACCGACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVPVKYK*EDRHQV
Trigger: AACCTGGTGTCGGTCCTCCCATTTGTATTTTACTGG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGCCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 2 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAACCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 2 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSEPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 2 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 2 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTCACTAGCTATCCTCTaGCACCAGTTCTTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSLAIL*HQFFLL
Trigger: TAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATGAACTGATTCAAGAATaGGCTGCAGACATTGTTGCA +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNELIQE*AADIVA
Trigger: TGCAACAATGTCTGCAGCTCATTCTTGAATCAGTTC...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCCAAAATATGATAGTGTaGACACGCAGACATAGGCAC +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTQNMIV*TRRHRH
Trigger: GTGCCTATGTCTGCGTGTTCACACTATCATATTTTG...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 2 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCTGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 2 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCCQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR TCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCCCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 2 (lower is better)
Translates to: NELEFVWLWQIERRFKRSPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: NELEFVWLWQIERRFKRSCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGGACCGACACCAGGTTaGCAATTTTCCACTTGGCTA +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGGPTPG*QFSTWL
Trigger: TAGCCAAGTGGAAAATTGGCAACCTGGTGTCGGTCC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 2 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR GCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 2 (lower is better)
Translates to: CMISKCSMPSCKPRLCVATWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAACATCCACCATCACTCTaGCTTCCATACTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: PPRITSYPLTPVLPPNREHPPSL*LPYFSS
Trigger: GGAAGAGAAGTATGGAAGCCAGAGTGATGGTGGATG...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCAGAAGCAGAGAGAGTaGCTCTGGAGGAGCAAACAC +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFQKQRE*LWRSKH
Trigger: GTGTTTGCTCCTCCAGAGCCACTCTCTCTGCTTCTG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAATCAATCTTCTCTCTCTaGTGCTTTCCCACTGGTGCT +
Preference number: 2 (lower is better)
Translates to: PPRITSYPLTPVLPPNRESIFSL*CFPTGA
Trigger: AGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGA...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCAGGCAGGAGACAGATaGCATGCTGAAATGAGGCAT +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGQAGDR*HAEMRH
Trigger: ATGCCTCATTTCAGCATGCCATCTGTCTCCTGCCTG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACACTGGACTTCACTGTaGTTCCCCCAGTTACTGTTT +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRHWTSL*FPQLLF
Trigger: AAACAGTAACTGGGGGAACCACAGTGAAGTCCAGTG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTTACTGTCCCTTTTCTaGTTGAGGCTATATTCCCTC +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNLLSLF*LRLYSL
Trigger: GAGGGAATATAGCCTCAACCAGAAAAGGGACAGTAA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGAAGCCCCTTCTAGTTaGTTCCTGTGTCTTACTGAC +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNEAPSS*FLCLTD
Trigger: GTCAGTAAGACACAGGAACCAACTAGAAGGGGCTTC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTATCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVSGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 2 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGAGTTTGTTTGGTTGTaGCAGATTGAGAGGCGGTTC +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLEFVWL*QIERRF
Trigger: GAACCGCCTCTCAATCTGCCACAACCAAACAAACTC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 2 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 2 (lower is better)
Translates to: NELEFVWLWQIERRFKRSFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 2 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: CMISKCSMPSCKPRLCVATFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAATGCAGCAGCAGACCTaGAGGAGCAAGGGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTMQQQT*RSKGRS
Trigger: ACTCCTCCCCTTGCTCCTTCAGGTCTGCTGCTGCAT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAATGCAGCAGCAGACCTaGAGGAGCAAGGGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKMQQQT*RSKGRS
Trigger: ACTCCTCCCCTTGCTCCTTCAGGTCTGCTGCTGCAT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATACTTTCATGAGCTGTTaGATCACCTTGTGTCAGCCA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNTFMSC*ITLCQP
Trigger: TGGCTGACACAAGGTGATTCAACAGCTCATGAAAGT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATGTCCCTTTTCTGGTTaGGGCTATATTCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRCPFSG*GYIPSS
Trigger: AGAAGAGGGAATATAGCCTCAACCAGAAAAGGGACA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTGTGTCTTACTGACATaGCCTCATCATTCTTTGAAG +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNCVLLT*PHHSLK
Trigger: CTTCAAAGAATGATGAGGTCATGTCAGTAAGACACA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTAGTATTGGTAGCTTTTaGTGCTACTTTCATCTCCCC +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLSIGSF*CYFHLP
Trigger: GGGGAGATGAAAGTAGCATCAAAAGCTACCAATACT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 2 (lower is better)
Translates to: LTENTPAACNSGRSLPPTEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCAAAAGCACTCTCAATaGAGCAGCAGACCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGQKHSQ*SSRPEG
Trigger: TCCTTCAGGTCTGCTGCTGCATTGAGAGTGCTTTTG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 2 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAACTGATGATGTCCCATaGCACCTTATTTCCCTTGTG +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRTDDVP*HLISLV
Trigger: CACAAGGGAAATAAGGTGGCATGGGACATCATCAGT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCATCCACCATCACTCTaGCTTCCATACTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGHPPSL*LPYFSS
Trigger: GGAAGAGAAGTATGGAAGCCAGAGTGATGGTGGATG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCTGGTGCTTTCCCACTaGTGCTTCTCATTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFLVLSH*CFSLAK
Trigger: TTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCACTGGTGCTTTCCCACTaGTGCTTCTCATTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPLVLSH*CFSLAK
Trigger: TTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAG...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACCAGTAAAATACAAATaGGAGGACCGACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRPVKYK*EDRHQV
Trigger: AACCTGGTGTCGGTCCTCCCATTTGTATTTTACTGG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNTHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 2 (lower is better)
Translates to: WISQNKINKAPPLITQLPRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATAGACAGATGGCATGCTaGAATGAGGCATATAGAAGA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNRQMAC*NEAYRR
Trigger: TCTTCTATATGCCTCATTTCAGCATGCCATCTGTCT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGACTTTCATGAGCTGTTaGATCACCTTGTGTCAGCCA +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGTFMSC*ITLCQP
Trigger: TGGCTGACACAAGGTGATTCAACAGCTCATGAAAGT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAACTTTCATGAGCTGTTaGATCACCTTGTGTCAGCCA +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQTFMSC*ITLCQP
Trigger: TGGCTGACACAAGGTGATTCAACAGCTCATGAAAGT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR TCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGTTCCTGTGTCTTACTaGCATGACCTCATCATTCTT +
Preference number: 2 (lower is better)
Translates to: PPRITSYPLTPVLPPNREVPVSY*HDLIIL
Trigger: AAGAATGATGAGGTCATGTCAGTAAGACACAGGAAC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGAACTGATTCAAGAATaGGCTGCAGACATTGTTGCA +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRELIQE*AADIVA
Trigger: TGCAACAATGTCTGCAGCTCATTCTTGAATCAGTTC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGAACTGATTCAAGAATaGGCTGCAGACATTGTTGCA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNELIQE*AADIVA
Trigger: TGCAACAATGTCTGCAGCTCATTCTTGAATCAGTTC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTATCTTCTCTCTCTGGTaGTTTCCCACTGGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFIFSLW*FPTGAS
Trigger: AGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGAT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCAAAAGCACTCTCAATaGAGCAGCAGACCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFQKHSQ*SSRPEG
Trigger: TCCTTCAGGTCTGCTGCTGCATTGAGAGTGCTTTTG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCATCCACCATCACTCTaGCTTCCATACTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFHPPSL*LPYFSS
Trigger: GGAAGAGAAGTATGGAAGCCAGAGTGATGGTGGATG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAATTGGCCAAACCAATTaGGAGCTCAAAGGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQIGQTN*ELKGRR
Trigger: TCTCCTACCTTTGAGCTCCCAATTGGTTTGGCCAAT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAACTGGTGCTTCTCATTaGCCAAACCAATTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPTGASH*PNQLGA
Trigger: AGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCACTGGACTTCACTGTaGTTCCCCCAGTTACTGTTT +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFHWTSL*FPQLLF
Trigger: AAACAGTAACTGGGGGAACCACAGTGAAGTCCAGTG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTATATTCCCTCTTCTaGCTTCACCTGATGACAAGG +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLYSLF*LHLMTR
Trigger: CCTTGTCATCAGGTGAAGCCAGAAGAGGGAATATAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAACTATATTCCCTCTTCTaGCTTCACCTGATGACAAGG +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQLYSLF*LHLMTR
Trigger: CCTTGTCATCAGGTGAAGCCAGAAGAGGGAATATAG...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAAACTTGCCCCAGATTTaGCCAGTGGGAAGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTNLPQI*PVGSPF
Trigger: GAAGGGGCTTCCCACTGGCCAAATCTGGGGCAAGTT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGCCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 2 (lower is better)
Translates to: DLTTLESLYTAFSETSFWPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTTAAAAATGCACATTTaGCCGAACAGTAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFLKMHI*PNSSSP
Trigger: TGGGCTGCTACTGTTCGGCCAAATGTGCATTTTTAA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 2 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCACCCCCTACCTCCAGTaGCATATCTACCCTAGGTTT +
Preference number: 2 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCTPYLQ*HIYPRF
Trigger: AAACCTAGGGTAGATATGTCACTGGAGGTAGGGGGT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATCACTAGCTATCCTCTaGCACCAGTTCTTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLSLAIL*HQFFLL
Trigger: TAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATGTCCCTTTTCTGGTTaGGGCTATATTCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPCPFSG*GYIPSS
Trigger: AGAAGAGGGAATATAGCCTCAACCAGAAAAGGGACA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAACCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 2 (lower is better)
Translates to: PPRITSYPLTPVLPPNREPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: WISQNKINKAPPLITQLPCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTREEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 2 (lower is better)
Translates to: PPRITSYPLTPVLPPNREEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCTCTACATGACACTTaGAGAGAACCTACTATATGC +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRSLHDT*REPTIC
Trigger: GCATATAGTAGGTTCTCTGCAAGTGTCATGTAGAGA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTATATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 2 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 2 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATATGTTTTTCCACAATTaGCTTTGTCACCCGGTCATA +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNMFFHN*LCHPVI
Trigger: TATGACCGGGTGACAAAGCCAATTGTGGAAAAACAT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: WISQNKINKAPPLITQLPTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAACTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR TCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCACCCCCTACCTCCAGTaGCATATCTACCCTAGGTTT +
Preference number: 2 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESTPYLQ*HIYPRF
Trigger: AAACCTAGGGTAGATATGTCACTGGAGGTAGGGGGT...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAGACAGATGGCATGCTaGAATGAGGCATATAGAAGA +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFRQMAC*NEAYRR
Trigger: TCTTCTATATGCCTCATTTCAGCATGCCATCTGTCT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAGAACTGATTCAAGAATaGGCTGCAGACATTGTTGCA +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPELIQE*AADIVA
Trigger: TGCAACAATGTCTGCAGCTCATTCTTGAATCAGTTC...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGAGAATACCAACCAGTaGAGAAATCATGCGTTAAAA +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRENTNQ*RNHALK
Trigger: TTTTAACGCATGATTTCTTCACTGGTTGGTATTCTC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACCTATGAATAAACAATaGGAATACCAACCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRPMNKQ*EYQPVK
Trigger: CTTCACTGGTTGGTATTCTCATTGTTTATTCATAGG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR TCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 2 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGTCATAAAGATGTCTTaGCCTCCAAACTTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRVIKMS*PPNFFF
Trigger: GAAAAAGAAGTTTGGAGGTCAAGACATCTTTATGAC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 2 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGGACCGACACCAGGTTaGCAATTTTCCACTTGGCTA +
Preference number: 2 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKGPTPG*QFSTWL
Trigger: TAGCCAAGTGGAAAATTGGCAACCTGGTGTCGGTCC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGTGATTATCTCTGATTaGTGGGATGATCTTGAATCT +
Preference number: 2 (lower is better)
Translates to: TWSRGWISQNKINKAPPLVIISD*WDDLES
Trigger: AGATTCAAGATCATCCCAGCAATCAGAGATAATCAC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTCTGTCCAACACAGGTaGCTCGTTTTGGATAGTAAA +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSVQHR*LVLDSK
Trigger: TTTACTATCCAAAACGAGGCACCTGTGTTGGACAGA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 2 (lower is better)
Translates to: APLETGPYSLTSHCASYLIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 2 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAGTTTTGTTGTCAACGTaGGTATGCCTCTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLVLLST*VCLCVC
Trigger: ACACACACAGAGGCATACCCACGTTGACAACAAAAC...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATTACTGTCCCTTTTCTaGTTGAGGCTATATTCCCTC +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPLLSLF*LRLYSL
Trigger: GAGGGAATATAGCCTCAACCAGAAAAGGGACAGTAA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTTAGCATCAAATACTaGGGTCTTAACCACTATGCC +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGFSIKY*GLNHYA
Trigger: GGCATAGTGGTTAAGACCCCAGTATTTGATGCTAAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GCTTCTGGTTCAAGAGTTTCTTCAGGTTCCACTACGGGCTGTTCTTCTACAGGTTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: ASGSRVSSGSTTGCSSTGFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...ACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTTGAAATTTGTTTCCTaGTCGAGGTATAGGCTTTTG +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNLKFVS*SRYRLL
Trigger: CAAAAGCCTATACCTCGACCAGGAAACAAATTTCAA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACATCACTAGCTATCCTCTaGCACCAGTTCTTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTSLAIL*HQFFLL
Trigger: TAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGA...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTACTATCATTTATTTTaGTGCTCAACTTGCCCCAGA +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGYYHLF*CSTCPR
Trigger: TCTGGGGCAAGTTGAGCATCAAAATAAATGATAGTA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAGTGTCTGGGCTTTGTaGTACAGATATACAAACATA +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSVWAL*YRYTNI
Trigger: TATGTTTGTATATCTGTATCACAAAGCCCAGACACT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTATGTGTTCCAGGCTTTaGAGTATAGTACTGATGATG +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFMCSRL*SIVLMM
Trigger: CATCATCAGTACTATACTTCAAAGCCTGGAACACAT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 2 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACATGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTCATCTTTGCCTTCTTaGTCATGTTTTTCCACAATT +
Preference number: 2 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSSLPS*SCFSTI
Trigger: AATTGTGGAAAAACATGAGCAAGAAGGCAAAGATGA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 2 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAGTTAATTTTACTATCTaGACCACCCGAGTAACCTTT +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQVNFTI*TTRVTF
Trigger: AAAGGTTACTCGGGTGGTCCAGATAGTAAAATTAAC...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGGAAGCCCCTTCTAGTTaGTTCCTGTGTCTTACTGAC +
Preference number: 2 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVEAPSS*FLCLTD
Trigger: GTCAGTAAGACACAGGAACCAACTAGAAGGGGCTTC...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATTTAGCATCAAATACTaGGGTCTTAACCACTATGCC +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPFSIKY*GLNHYA
Trigger: GGCATAGTGGTTAAGACCCCAGTATTTGATGCTAAA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAACTGTGGAGCTGTGTTTaGAATTACTATTTATACCCA +
Preference number: 2 (lower is better)
Translates to: LSGIFPCARKNSTISSTQLWSCV*NYYLYP
Trigger: TGGGTATAAATAGTAATTCCAAACACAGCTCCACAG...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTGTGGAGCTGTGTTTaGAATTACTATTTATACCCA +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLWSCV*NYYLYP
Trigger: TGGGTATAAATAGTAATTCCAAACACAGCTCCACAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 2 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTGAAATTTGTTTCCTaGTCGAGGTATAGGCTTTTG +
Preference number: 2 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLKFVS*SRYRLL
Trigger: CAAAAGCCTATACCTCGACCAGGAAACAAATTTCAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTACTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTGTCAACGTGGGTATaGCTCTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLSTWV*LCVCVC
Trigger: ACACACACACACACAGAGGCATACCCACGTTGACAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 2 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGGTTTTGTTGTCAACGTaGGTATGCCTCTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVVLLST*VCLCVC
Trigger: ACACACACAGAGGCATACCCACGTTGACAACAAAAC...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAATTGGCCAAACCAATTaGGAGCTCAAAGGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTIGQTN*ELKGRR
Trigger: TCTCCTACCTTTGAGCTCCCAATTGGTTTGGCCAAT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAGTTAATTTTACTATCTaGACCACCCGAGTAACCTTT +
Preference number: 2 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPVNFTI*TTRVTF
Trigger: AAAGGTTACTCGGGTGGTCCAGATAGTAAAATTAAC...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 2 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCTGTTTAGGGAAGAATaGATAGGCCCACAGACAGAT +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLFREE*IGPQTD
Trigger: ATCTGTCTGTGGGCCTATTCATTCTTCCCTAAACAG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR TCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 2 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTATTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 2 (lower is better)
Translates to: DLTTLESLYTAFSETSFWMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 2 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTGTGTCTTACTGACATaGCCTCATCATTCTTTGAAG +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCCVLLT*PHHSLK
Trigger: CTTCAAAGAATGATGAGGTCATGTCAGTAAGACACA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAAAGGCTATATACAATaGGCTGGATATAAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCKGYIQ*AGYKAS
Trigger: ACTGGCCTTATATCCAGCTCATTGTATATAGCCTTT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGTCATAAAGATGTCTTaGCCTCCAAACTTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKVIKMS*PPNFFF
Trigger: GAAAAAGAAGTTTGGAGGTCAAGACATCTTTATGAC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAACTGTGGAGCTGTGTTTaGAATTACTATTTATACCCA +
Preference number: 2 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKLWSCV*NYYLYP
Trigger: TGGGTATAAATAGTAATTCCAAACACAGCTCCACAG...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTATGTTTTTCCACAATTaGCTTTGTCACCCGGTCATA +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCMFFHN*LCHPVI
Trigger: TATGACCGGGTGACAAAGCCAATTGTGGAAAAACAT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTACTTTCATCTCCCCATaGTCTTGGTACTTACTTAAA +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCTFISP*SWYLLK
Trigger: TTTAAGTAAGTACCAAGATCATGGGGAGATGAAAGT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGCCTTCAAGTTTAAATaGCTCATTCTGAAAAGACGA +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCAFKFK*LILKRR
Trigger: TCGTCTTTTCAGAATGAGGCATTTAAACTTGAAGGC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR CCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGTGGTTACTAGACTTTTaGATTTCATGCACCAGTAAA +
Preference number: 2 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVWLLDF*ISCTSK
Trigger: TTTACTGGTGCATGAAATCCAAAAGTCTAGTAACCA...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 2 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR GCA 72 bp TCCGGGATGACCTACTGGTCTGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTCGGGGCACAAACAAGG +
Preference number: 3 (lower is better)
Translates to: SGMTYWSDSGCC*VSLRVVGAQTR
Trigger: CCTTGTTTGTGCCCCGACGACACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATCTGTCCCTTTTCTGGTaGAGGCTATATTCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCARALPFSPNLSLFW*RLYSLF
Trigger: GAAGAGGGAATATAGCCTCAACCAGAAAAGGGACAG...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 3 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCARALPFSPNYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 3 (lower is better)
Translates to: LHWALWNVLRQLPLLPAEIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATTTACTATCATTTATTTaGATGCTCAACTTGCCCCAG +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCARALPFSPNLLSFI*MLNLPQ
Trigger: CTGGGGCAAGTTGAGCATCAAAATAAATGATAGTAA...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGTTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 3 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 3 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR GCA 72 bp TTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTAGCTGGGAGGGCCATG +
Preference number: 3 (lower is better)
Translates to: FSCMISKCSMPS*KPRLCVAGRAM
Trigger: CATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 3 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 3 (lower is better)
Translates to: LTENTPAACNSGRSLPPTTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: APLETGPYSLTSHCASYLTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: CMISKCSMPSCKPRLCVATGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: LTENTPAACNSGRSLPPTYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 3 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 3 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR GCA 72 bp AGGAGAAAGCTACAAGGAATACAAAAGCACTCTCAATaGAGCAGCAGACCTGAAGGAGCAAGGGGAGGAGTG +
Preference number: 3 (lower is better)
Translates to: RRKLQGIQKHSQ*SSRPEGARGGV
Trigger: CACTCCTCCCCTTGCTCCTTCAGGTCTGCTGCTGCATTGAGAGTGCTTTTGTATTCCTTGTAGCTTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR CCA 72 bp CTGTCCCTTTTCTGGTTGAGGCTATATTCCCTCTTCTaGCTTCACCTGATGACAAGGGAAGGCTTCTCGTTC +
Preference number: 3 (lower is better)
Translates to: LSLFWLRLYSLF*LHLMTREGFSF
Trigger: GAACGAGAAGCCTTCCCTTGTCATCAGGTGAAGCCAGAAGAGGGAATATAGCCTCAACCAGAAAAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 3 (lower is better)
Translates to: APLETGPYSLTSHCASYLTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 3 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: TWSRGWISQNKINKAPPLTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: APLETGPYSLTSHCASYLPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GCTTCTGGTTCAAGAGTTTCTTCAGGTTCCACTACGGGCTGTTCTTCTACAGGTCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: ASGSRVSSGSTTGCSSTGPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...ACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: APLETGPYSLTSHCASYLYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAACACTGGTGCTTCTCATaGGCCAAACCAATTGGGAGC +
Preference number: 3 (lower is better)
Translates to: PPRITSYPLTPVLPPNREHWCFS*AKPIGS
Trigger: GCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTG...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATGACTTTCATGAGCTGTaGAATCACCTTGTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNDFHEL*NHLVSA
Trigger: GGCTGACACAAGGTGATTCAACAGCTCATGAAAGTC...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATGGCAAAGTCAGTCCATaGTACAAGGATGGGAAAAGC +
Preference number: 3 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNGKVSP*YKDGKS
Trigger: GCTTTTCCCATCCTTGTACAATGGACTGACTTTGCC...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 3 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 3 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR CCA 72 bp ACACACAGAATGATGCAGAAGCAGAGAGAGTGGCTCTaGAGGAGCAAACACAGTATCCTACACACATGGCAA +
Preference number: 3 (lower is better)
Translates to: THRMMQKQREWL*RSKHSILHTWQ
Trigger: TTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCCACTCTCTCTGCTTCTGCATCATTCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR CCA 72 bp TCCTATGTCAATCTTCTCTCTCTGGTGCTTTCCCACTaGTGCTTCTCATTGGCCAAACCAATTGGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: SYVNLLSLVLSH*CFSLAKPIGSS
Trigger: TGAGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGACATAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR CCA 72 bp TTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACATGGTCAGATCAGTTTT +
Preference number: 3 (lower is better)
Translates to: FHNWLCHPVIGR*TSCSGHGQISF
Trigger: AAAACTGATCTGACCATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 3 (lower is better)
Translates to: PPRITSYPLTPVLPPNRETQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 3 (lower is better)
Translates to: TWSRGWISQNKINKAPPLTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 3 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: TWSRGWISQNKINKAPPLPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 3 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKDNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 3 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 3 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 3 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 3 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: WISQNKINKAPPLITQLPTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: WISQNKINKAPPLITQLPMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: NELEFVWLWQIERRFKRSYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: LSGIFPCARKNSTISSTQYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCACTGGTGCTTCTCATaGGCCAAACCAATTGGGAGC +
Preference number: 3 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFHWCFS*AKPIGS
Trigger: GCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGACTTTCATGAGCTGTaGAATCACCTTGTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: PPRITSYPLTPVLPPNREDFHEL*NHLVSA
Trigger: GGCTGACACAAGGTGATTCAACAGCTCATGAAAGTC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGACTTTCATGAGCTGTaGAATCACCTTGTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNDFHEL*NHLVSA
Trigger: GGCTGACACAAGGTGATTCAACAGCTCATGAAAGTC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGACTTTCATGAGCTGTaGAATCACCTTGTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRDFHEL*NHLVSA
Trigger: GGCTGACACAAGGTGATTCAACAGCTCATGAAAGTC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGGCAAAGTCAGTCCATaGTACAAGGATGGGAAAAGC +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRGKVSP*YKDGKS
Trigger: GCTTTTCCCATCCTTGTACAATGGACTGACTTTGCC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCACTTATGCAGTAGAGTaGTCTGTCCCAATGGTTACT +
Preference number: 3 (lower is better)
Translates to: LTENTPAACNSGRSLPPTTYAVE*SVPMVT
Trigger: AGTAACCATTGGGACAGACAACTCTACTGCATAAGT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCACTTATGCAGTAGAGTaGTCTGTCCCAATGGTTACT +
Preference number: 3 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVTYAVE*SVPMVT
Trigger: AGTAACCATTGGGACAGACAACTCTACTGCATAAGT...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 3 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRDNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 3 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 3 (lower is better)
Translates to: TWSRGWISQNKINKAPPLAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATTTCCACAATTGGCTTaGTCACCCGGTCATAGGAAG +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRFPQLA*SPGHRK
Trigger: CTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 3 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 3 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR GCA 72 bp TATGTCAATCTTCTCTCTCTGGTGCTTTCCCACTGGTaGTTCTCATTGGCCAAACCAATTGGGAGCTCAAAG +
Preference number: 3 (lower is better)
Translates to: YVNLLSLVLSHW*FSLAKPIGSSK
Trigger: CTTTGAGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 3 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: DLTTLESLYTAFSETSFWMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 3 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CAA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCCAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 3 (lower is better)
Translates to: NELEFVWLWQIERRFKRSQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LSGIFPCARKNSTISSTQSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 3 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 3 (lower is better)
Translates to: LTENTPAACNSGRSLPPTCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 3 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 3 (lower is better)
Translates to: TWSRGWISQNKINKAPPLFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 3 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 3 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR CCA 72 bp GTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATaGCATGCTGAAATGAGGCATATAGAAGAATTTCAT +
Preference number: 3 (lower is better)
Translates to: VESPCVSQAGDR*HAEMRHIEEFH
Trigger: ATGAAATTCTTCTATATGCCTCATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR CCA 72 bp GTATTTATGATAACCAGAGACAGAGTATGTATAGCTTaGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTC +
Preference number: 3 (lower is better)
Translates to: VFMITRDRVCIA*LHRGGVLGSYV
Trigger: GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTCTCTGGTTATCATAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 3 (lower is better)
Translates to: APLETGPYSLTSHCASYLCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACACTGGTGCTTCTCATaGGCCAAACCAATTGGGAGC +
Preference number: 3 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTHWCFS*AKPIGS
Trigger: GCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCTGTGGAGCTGTGTTaGGAATTACTATTTATACCC +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRSVELC*ELLFIP
Trigger: GGGTATAAATAGTAATTCCAAACACAGCTCCACAGA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATCAGTGGTTGTTCCATaGTCATCAGTAGCTGGCTTA +
Preference number: 3 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPSVVVP*SSVAGL
Trigger: TAAGCCAGCTACTGATGACAATGGAACAACCACTGA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 3 (lower is better)
Translates to: APLETGPYSLTSHCASYLVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 3 (lower is better)
Translates to: PPRITSYPLTPVLPPNRETVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTTCCATCTGAAAGTATaGGTAGCTTTTGATGCTACT +
Preference number: 3 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAFHLKV*VAFDAT
Trigger: AGTAGCATCAAAAGCTACCAATACTTTCAGATGGAA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR CAA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 3 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 3 (lower is better)
Translates to: APLETGPYSLTSHCASYLAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 3 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 3 (lower is better)
Translates to: TWSRGWISQNKINKAPPLTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR TCA 72 bp CTATTGCTCATGAGGCTAGTTATGTGTTCCAGGCTTTaGAGTATAGTACTGATGATGTCCCATGCCACCTTA +
Preference number: 3 (lower is better)
Translates to: LLLMRLVMCSRL*SIVLMMSHATL
Trigger: TAAGGTGGCATGGGACATCATCAGTACTATACTTCAAAGCCTGGAACACATAACTAGCCTCATGAGCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR TCA 72 bp GTGTGTGTGAGAGAGAGAGAGAGAGAAGGAGACGTGTaGGAATACAACTTTTATACCTTAGCCACACTAGTT +
Preference number: 3 (lower is better)
Translates to: VCVREREREGDV*EYNFYTLATLV
Trigger: AACTAGTGTGGCTAAGGTATAAAAGTTGTATTCTCACACGTCTCCTTCTCTCTCTCTCTCTCTCACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR GCA 72 bp AGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTaGTTTCCCACTGGTGCTTCTCATTGGCCAAACCAA +
Preference number: 3 (lower is better)
Translates to: RRNIPMSIFSLW*FPTGASHWPNQ
Trigger: TTGGTTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 3 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: LSGIFPCARKNSTISSTQYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACATATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 3 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 3 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCACTGGTGCTTCTCATaGGCCAAACCAATTGGGAGC +
Preference number: 3 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCHWCFS*AKPIGS
Trigger: GCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATAATTACCAGACATATTaGCTGTCTTTAGTGCGACAA +
Preference number: 3 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNNYQTY*LSLVRQ
Trigger: TTGTCGCACTAAAGACAGCAAATATGTCTGGTAATT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCTTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 3 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 3 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 3 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 3 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 3 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 3 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 3 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGGGCAAAGTCAGTCCATaGTACAAGGATGGGAAAAGC +
Preference number: 3 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVGKVSP*YKDGKS
Trigger: GCTTTTCCCATCCTTGTACAATGGACTGACTTTGCC...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
3UTR-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTACTATCATTTATTTaGATGCTCAACTTGCCCCAG +
Preference number: 3 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLLSFI*MLNLPQ
Trigger: CTGGGGCAAGTTGAGCATCAAAATAAATGATAGTAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTATCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 3 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 3 (lower is better)
Translates to: WISQNKINKAPPLITQLPPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTATGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 3 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGCCACCTTATTTCCCTaGTGCATCATTATGATAAAC +
Preference number: 3 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSATLFP*CIIMIN
Trigger: GTTTATCATAATGATGCACAAGGGAAATAAGGTGGC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTATGTGTTCCAGGCTTaGAAGTATAGTACTGATGAT +
Preference number: 3 (lower is better)
Translates to: WISQNKINKAPPLITQLPYVFQA*KYSTDD
Trigger: ATCATCAGTACTATACTTCAAAGCCTGGAACACATA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
3UTR-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 3 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 3 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAAATGAGCTGCAGACATaGTTGCATTCACCCCTAAAT +
Preference number: 3 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTNELQT*LHSPLN
Trigger: ATTTAGGGGTGAATGCAACAATGTCTGCAGCTCATT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 3 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR TCA 72 bp AATTATAAAGTCCAGGGCATACAAAATATGATAGTGTaGACACGCAGACATAGGCACTTCAGTAACACACAG +
Preference number: 3 (lower is better)
Translates to: NYKVQGIQNMIV*TRRHRHFSNTQ
Trigger: CTGTGTGTTACTGAAGTGCCTATGTCTGCGTGTTCACACTATCATATTTTGTATGCCCTGGACTTTATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 3 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 3 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
3UTR-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 3 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
3UTR-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 3 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 3 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR CCA 72 bp GATAGTCAAGATCTTTCCCAATTTCTGCTGTATGATTaGACATACAACTGTCTTTCTTGTTGTTTAGATCAT +
Preference number: 3 (lower is better)
Translates to: DSQDLSQFLLYD*TYNCLSCCLDH
Trigger: ATGATCTAAACAACAAGAAAGACAGTTGTATGTCCAATCATACAGCAGAAATTGGGAAAGATCTTGACTATC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGTGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAECQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGAGTTGCTTGGGAGGCTaGGGCAGGAGAACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAESCLGG*GRRTGE
Trigger: TTCTCCTGTTCTCCTGCCTCAGCCTCCCAAGCAACT...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636759.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATCTGGGACACACAGAATaGTGCAGAAGCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNLGHTE*CRSRES
Trigger: ACTCTCTCTGCTTCTGCATCATTCTGTGTGTCCCAG...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAEGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGTCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAESGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATTCACTAGCTATCCTCTaGCACCAGTTCTTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNSLAIL*HQFFLL
Trigger: TAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGA...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSSCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGGGGCTGCAGTCTCACTaGGGCAGAACACACAGACAC +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRGLQSH*GRTHRH
Trigger: GTGTCTGTGTGTTCTGCCCCAGTGAGACTGCAGCCC...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGAAAATTAGCTGGGCCTaGTGGTGGGTCCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAEKISWA*WWVPVI
Trigger: GATTACAGGGACCCACCACCAGGCCCAGCTAATTTT...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636759.1
CDS-3UTR TCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAEENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWCQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATACTTTCATGAGCTGTTaGATCACCTTGTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNTFMSC*ITLCQP
Trigger: TGGCTGACACAAGGTGATTCAACAGCTCATGAAAGT...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGAACTTGCCCCAGATTTaGCCAGTGGGAAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRNLPQI*PVGSPF
Trigger: GAAGGGGCTTCCCACTGGCCAAATCTGGGGCAAGTT...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPDDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCATGCAGCAGCAGACCTaGAGGAGCAAGGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTMQQQT*RSKGRS
Trigger: ACTCCTCCCCTTGCTCCTTCAGGTCTGCTGCTGCAT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATAGACAGATGGCATGCTaGAATGAGGCATATAGAAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNRQMAC*NEAYRR
Trigger: TCTTCTATATGCCTCATTTCAGCATGCCATCTGTCT...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATCAAAATATGATAGTGTaGACACGCAGACATAGGCAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNQNMIV*TRRHRH
Trigger: GTGCCTATGTCTGCGTGTTCACACTATCATATTTTG...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGTGCACCAGAGACCTCTaGAGTATCCTCTCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRCTRDL*SILSAS
Trigger: TGAAGCCGAGAGGATACTGCAGAGGTCTCTGGTGCA...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636759.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATGGAAAATTATCCATCTaGAGTGAGGAACAGCATCAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNGKLSI*SEEQHH
Trigger: GTGATGCTGTTCCTCACTGCAGATGGATAATTTTCC...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303395.9
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLSCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKSCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGTGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACGGGCTGCAGTCTCACTaGGGCAGAACACACAGACAC +
Preference number: 4 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHGLQSH*GRTHRH
Trigger: GTGTCTGTGTGTTCTGCCCCAGTGAGACTGCAGCCC...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAETHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAEIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAEFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGAACTTGCCCCAGATTTaGCCAGTGGGAAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMNLPQI*PVGSPF
Trigger: GAAGGGGCTTCCCACTGGCCAAATCTGGGGCAAGTT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNREAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLCQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGCTGGGACACACAGAATaGTGCAGAAGCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRLGHTE*CRSRES
Trigger: ACTCTCTCTGCTTCTGCATCATTCTGTGTGTCCCAG...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATGCAGCAGCAGACCTaGAGGAGCAAGGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAMQQQT*RSKGRS
Trigger: ACTCCTCCCCTTGCTCCTTCAGGTCTGCTGCTGCAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGAGAGGGGAGTGGCATaGAAATCTGTCCAACACAGG +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWERGVA*KSVQHR
Trigger: CCTGTGTTGGACAGATTTTCATGCCACTCCCCTCTC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR GCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGGCACACATACACACATaGACCAGAGACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRAHIHT*TRDLCS
Trigger: ACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGC...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAAAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSESCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFASCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNRESCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAEILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGGGCTGCAGTCTCACTaGGGCAGAACACACAGACAC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLGLQSH*GRTHRH
Trigger: GTGTCTGTGTGTTCTGCCCCAGTGAGACTGCAGCCC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGCAGAAGCAGAGAGAGTaGCTCTGGAGGAGCAAACAC +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMQKQRE*LWRSKH
Trigger: GTGTTTGCTCCTCCAGAGCCACTCTCTCTGCTTCTG...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMDDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGAGGCGATGTAGGAACTaGAGGTCCACCAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMRRCRN*RSTNQG
Trigger: TCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCT...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATAGGCGATGTAGGAACTaGAGGTCCACCAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNRRCRN*RSTNQG
Trigger: TCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCCCTCTTGCTTGTTGCTaGGGTGAGGGGCTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTPLACC*GEGLSY
Trigger: ATAACTCAGCCCCTCACCTCAGCAACAAGCAAGAGG...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGGAGGAACAGTTCCATaGGTTTCCACAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLGGTVP*VSTGQQ
Trigger: CTGCTGGCCTGTGGAAACTCATGGAACTGTTCCTCC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635750.1
ENST00000641603.1
CDS-3UTR GCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGCACACATACACACATaGACCAGAGACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWAHIHT*TRDLCS
Trigger: ACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGAGTATTTACAAGGGCTaGAGTCTCACTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRSIYKG*SLTGAE
Trigger: TTCTGCCCCAGTGAGACTGCAGCCCTTGTAAATACT...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATAAACATACAAACTTATaGAGTAGAGTTGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNKHTNL*SRVVCP
Trigger: GGGACAGACAACTCTACTGCATAAGTTTGTATGTTT...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCCCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGCAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNSGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATTCATTTCAGTTTCAGTaGTTGTTCCATTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNSFQFQ*LFHCHQ
Trigger: CTGATGACAATGGAACAACCACTGAAACTGAAATGA...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAELLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LHWALWNVLRQLPLLPAESETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVATTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATGCAGTACCCAATTCATaGTGGTTTAGAAACACATTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCARALPFSPNAVPNS*WFRNTF
Trigger: AAATGTGTTTCTAAACCACCATGAATTGGGTACTGC...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAAAGCTGGGCCTGGTGGTaGGTCCCTGTAATCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSESWAWW*VPVIPV
Trigger: AACTGGGATTACAGGGACCCACCACCAGGCCCAGCT...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636759.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFALSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVADDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGCQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAGGCGATGTAGGAACTaGAGGTCCACCAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVARRCRN*RSTNQG
Trigger: TCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVASGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCACCCCCTACCTCCAGTaGCATATCTACCCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTTPYLQ*HIYPRF
Trigger: AAACCTAGGGTAGATATGTCACTGGAGGTAGGGGGT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAATGCAGCAGCAGACCTaGAGGAGCAAGGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQMQQQT*RSKGRS
Trigger: ACTCCTCCCCTTGCTCCTTCAGGTCTGCTGCTGCAT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTGCTTGTTGCTGAGGTaGGGGGCTGAGTTATCTGCA +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLCLLLR*GAELSA
Trigger: TGCAGATAACTCAGCCCCTCACCTCAGCAACAAGCA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCCTCTTGCTTGTTGCTaGGGTGAGGGGCTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAPLACC*GEGLSY
Trigger: ATAACTCAGCCCCTCACCTCAGCAACAAGCAAGAGG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGGAGGAACAGTTCCATaGGTTTCCACAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNGGTVP*VSTGQQ
Trigger: CTGCTGGCCTGTGGAAACTCATGGAACTGTTCCTCC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635750.1
ENST00000641603.1
CDS-3UTR TCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAGTTGCCGTTGCTGCCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQVAVAA*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGGCAGCAACGGCAAC...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641575.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTGCACCAGAGACCTCTaGAGTATCCTCTCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVACTRDL*SILSAS
Trigger: TGAAGCCGAGAGGATACTGCAGAGGTCTCTGGTGCA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATGCACACATACACACATaGACCAGAGACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNAHIHT*TRDLCS
Trigger: ACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGC...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303395.9
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGAGTATTTACAAGGGCTaGAGTCTCACTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWSIYKG*SLTGAE
Trigger: TTCTGCCCCAGTGAGACTGCAGCCCTTGTAAATACT...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVSCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNREDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCTTCTGGTTCAAGAGTTTCTTCAGGTTCCACTACGGGCTGTTCTTCTACAGGTTGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: ASGSRVSSGSTTGCSSTGWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...ACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGCCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLSGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGGAGTTTGTTTGGTTGTaGCAGATTGAGAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMEFVWL*QIERRF
Trigger: GAACCGCCTCTCAATCTGCCACAACCAAACAAACTC...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGACTGGTGCTTCTCATTaGCCAAACCAATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWTGASH*PNQLGA
Trigger: AGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGT...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATCTGGTGCTTTCCCACTaGTGCTTCTCATTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNLVLSH*CFSLAK
Trigger: TTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAG...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCAGGCAGGAGACAGATaGCATGCTGAAATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVQAGDR*HAEMRH
Trigger: ATGCCTCATTTCAGCATGCCATCTGTCTCCTGCCTG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGAAGCCCCTTCTAGTTaGTTCCTGTGTCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWEAPSS*FLCLTD
Trigger: GTCAGTAAGACACAGGAACCAACTAGAAGGGGCTTC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAACTTGCCCCAGATTTaGCCAGTGGGAAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFNLPQI*PVGSPF
Trigger: GAAGGGGCTTCCCACTGGCCAAATCTGGGGCAAGTT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAGTGGTTGTTCCCTCTaGCAGAAGCTGTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVASGCSL*QKLSNR
Trigger: CCTGTTGGACAGCTTCTGCCAGAGGGAACAACCACT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR TCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGCCGTTGCTGCCTGCTaGGCTGCCTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSAVAAC*AASCCF
Trigger: AAAGCAACAGGAGGCAGCTCAGCAGGCAGCAACGGC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFDDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYDDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPCQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAAGGCGATGTAGGAACTaGAGGTCCACCAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRRRCRN*RSTNQG
Trigger: TCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATAGGCGATGTAGGAACTaGAGGTCCACCAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNRRCRN*RSTNQG
Trigger: TCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAGGCGATGTAGGAACTaGAGGTCCACCAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFARRCRN*RSTNQG
Trigger: TCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAAGGCGATGTAGGAACTaGAGGTCCACCAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNRERRCRN*RSTNQG
Trigger: TCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCT...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFASGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTTGCTTGTTGCTGAGGTaGGGGGCTGAGTTATCTGCA +
Preference number: 4 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLCLLLR*GAELSA
Trigger: TGCAGATAACTCAGCCCCTCACCTCAGCAACAAGCA...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTGCACCAGAGACCTCTaGAGTATCCTCTCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFACTRDL*SILSAS
Trigger: TGAAGCCGAGAGGATACTGCAGAGGTCTCTGGTGCA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTGCACCAGAGACCTCTaGAGTATCCTCTCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFCTRDL*SILSAS
Trigger: TGAAGCCGAGAGGATACTGCAGAGGTCTCTGGTGCA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTGCACCAGAGACCTCTaGAGTATCCTCTCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYCTRDL*SILSAS
Trigger: TGAAGCCGAGAGGATACTGCAGAGGTCTCTGGTGCA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATGCACACATACACACATaGACCAGAGACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHAHIHT*TRDLCS
Trigger: ACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGC...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACAGTATTTACAAGGGCTaGAGTCTCACTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHSIYKG*SLTGAE
Trigger: TTCTGCCCCAGTGAGACTGCAGCCCTTGTAAATACT...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGGGAAAATTATCCATCTaGAGTGAGGAACAGCATCAC +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRGKLSI*SEEQHH
Trigger: GTGATGCTGTTCCTCACTGCAGATGGATAATTTTCC...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTRSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAATGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNREWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRNHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFALFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATATCTTCTCTCTCTGGTaGTTTCCCACTGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNIFSLW*FPTGAS
Trigger: AGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGAT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGGACCGACACCAGGTTaGCAATTTTCCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLGPTPG*QFSTWL
Trigger: TAGCCAAGTGGAAAATTGGCAACCTGGTGTCGGTCC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGGGCTGCAGTCTCACTaGGGCAGAACACACAGACAC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFGLQSH*GRTHRH
Trigger: GTGTCTGTGTGTTCTGCCCCAGTGAGACTGCAGCCC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAGGGCTGCAGTCTCACTaGGGCAGAACACACAGACAC +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVGLQSH*GRTHRH
Trigger: GTGTCTGTGTGTTCTGCCCCAGTGAGACTGCAGCCC...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCGTCACTATTTGGCTTTaGGCCATTTTCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSVTIWL*AIFVVI
Trigger: GATGACGACGAAAATGGCCCAAAGCCAAATAGTGAC...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMTHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFALHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCCAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRSGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVSGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFASGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 4 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCATCCACCATCACTCTaGCTTCCATACTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVHPPSL*LPYFSS
Trigger: GGAAGAGAAGTATGGAAGCCAGAGTGATGGTGGATG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATCATCCACCATCACTCTaGCTTCCATACTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNHPPSL*LPYFSS
Trigger: GGAAGAGAAGTATGGAAGCCAGAGTGATGGTGGATG...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGCAGAAGCAGAGAGAGTaGCTCTGGAGGAGCAAACAC +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVQKQRE*LWRSKH
Trigger: GTGTTTGCTCCTCCAGAGCCACTCTCTCTGCTTCTG...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCTGGTGCTTTCCCACTaGTGCTTCTCATTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVALVLSH*CFSLAK
Trigger: TTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAACTTGCCCCAGATTTaGCCAGTGGGAAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGNLPQI*PVGSPF
Trigger: GAAGGGGCTTCCCACTGGCCAAATCTGGGGCAAGTT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATAAGGGTGCTGCTCTGTaGAGCTGTGTTTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNKGAAL*SCVWNY
Trigger: GTAATTCCAAACACAGCTCCACAGAGCAGCACCCTT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTAGTGGTTGTTCCCTCTaGCAGAAGCTGTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLSGCSL*QKLSNR
Trigger: CCTGTTGGACAGCTTCTGCCAGAGGGAACAACCACT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGAGAGTATGTATAGCTTaGCTCCATAGGGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMRVCIA*LHRGGV
Trigger: AACACCACCCCTATGGAGCCAAGCTATACATACTCT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGATAATTGCCCAAACCTaGAAGCAACCAAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRIIAQT*KQPRCP
Trigger: AGGACATCTTGGTTGCTTCCAGGTTTGGGCAATTAT...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636759.1
CDS-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGDDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGDDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGTGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: DLTTLESLYTAFSETSFWCQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636194.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAGGCGATGTAGGAACTaGAGGTCCACCAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGRRCRN*RSTNQG
Trigger: TCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAGGCGATGTAGGAACTaGAGGTCCACCAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGRRCRN*RSTNQG
Trigger: TCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVARVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATACCCCCTACCTCCAGTaGCATATCTACCCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYTPYLQ*HIYPRF
Trigger: AAACCTAGGGTAGATATGTCACTGGAGGTAGGGGGT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAATGCAGCAGCAGACCTaGAGGAGCAAGGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLMQQQT*RSKGRS
Trigger: ACTCCTCCCCTTGCTCCTTCAGGTCTGCTGCTGCAT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCTGTCCCTTTTCTGGTTaGGGCTATATTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVCPFSG*GYIPSS
Trigger: AGAAGAGGGAATATAGCCTCAACCAGAAAAGGGACA...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGCTGAGGTGAGGGGCTaGGTTATCTGCAAATATGAG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYAEVRG*VICKYE
Trigger: CTCATATTTGCAGATAACTCAGCCCCTCACCTCAGC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAAGCTGAGGTGAGGGGCTaGGTTATCTGCAAATATGAG +
Preference number: 4 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSEAEVRG*VICKYE
Trigger: CTCATATTTGCAGATAACTCAGCCCCTCACCTCAGC...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTGGTTGTTCCTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGWLFLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGGAACAACCA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671940.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGCACACATACACACATaGACCAGAGACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYAHIHT*TRDLCS
Trigger: ACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGCAATGTGCCTTCAGTTaGAATTGTTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRQCAFS*NCSDSF
Trigger: GAAGGAATCTGAACAATTGCAACTGAAGGCACATTG...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCGGAAAATTATCCATCTaGAGTGAGGAACAGCATCAC +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSGKLSI*SEEQHH
Trigger: GTGATGCTGTTCCTCACTGCAGATGGATAATTTTCC...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCTTTGCCTTTTCTTCTaGAATGCGTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPLCLFF*NASFNS
Trigger: GCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAG...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVALWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATCTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFACCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAATGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSECCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCSCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVARSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLRSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAAGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSEAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNREAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAACTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVACSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFASLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGGACCGACACCAGGTTaGCAATTTTCCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNGPTPG*QFSTWL
Trigger: TAGCCAAGTGGAAAATTGGCAACCTGGTGTCGGTCC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTCTGTCCAACACAGGTaGCTCGTTTTGGATAGTAAA +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSSVQHR*LVLDSK
Trigger: TTTACTATCCAAAACGAGGCACCTGTGTTGGACAGA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGCTCCGTGGACATCATaGCTTTCTAAGCAAGCATTG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLAPWTS*LSKQAL
Trigger: CAATGCTTGCTTAGAAAGGCATGATGTCCACGGAGC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp GCTTCTGGTTCAAGAGTTTCTTCAGGTTCCACTACGGGCTGTTCTTCTACAGGTGCTCCGTGGACATCATaGCTTTCTAAGCAAGCATTG +
Preference number: 4 (lower is better)
Translates to: ASGSRVSSGSTTGCSSTGAPWTS*LSKQAL
Trigger: CAATGCTTGCTTAGAAAGGCATGATGTCCACGGAGC...ACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGGTCACTATTTGGCTTTaGGCCATTTTCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMVTIWL*AIFVVI
Trigger: GATGACGACGAAAATGGCCCAAAGCCAAATAGTGAC...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATCAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGAGTTTGTTTGGTTGTaGCAGATTGAGAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAEFVWL*QIERRF
Trigger: GAACCGCCTCTCAATCTGCCACAACCAAACAAACTC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTATGTTTTTCCACAATTaGCTTTGTCACCCGGTCATA +
Preference number: 4 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPMFFHN*LCHPVI
Trigger: TATGACCGGGTGACAAAGCCAATTGTGGAAAAACAT...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp GCTTCTGGTTCAAGAGTTTCTTCAGGTTCCACTACGGGCTGTTCTTCTACAGGTGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: ASGSRVSSGSTTGCSSTGAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...ACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTACTGGTGCTTCTCATTaGCCAAACCAATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLTGASH*PNQLGA
Trigger: AGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTACTGGTGCTTCTCATTaGCCAAACCAATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVATGASH*PNQLGA
Trigger: AGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTCAATCTTCTCTCTCTaGTGCTTTCCCACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLSIFSL*CFPTGA
Trigger: AGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACAGGCAGGAGACAGATaGCATGCTGAAATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRQAGDR*HAEMRH
Trigger: ATGCCTCATTTCAGCATGCCATCTGTCTCCTGCCTG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCAGGCAGGAGACAGATaGCATGCTGAAATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAQAGDR*HAEMRH
Trigger: ATGCCTCATTTCAGCATGCCATCTGTCTCCTGCCTG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCTATATTCCCTCTTCTaGCTTCACCTGATGACAAGG +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVLYSLF*LHLMTR
Trigger: CCTTGTCATCAGGTGAAGCCAGAAGAGGGAATATAG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGTTACTGTCCCTTTTCTaGTTGAGGCTATATTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMLLSLF*LRLYSL
Trigger: GAGGGAATATAGCCTCAACCAGAAAAGGGACAGTAA...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGAAGCCCCTTCTAGTTaGTTCCTGTGTCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAEAPSS*FLCLTD
Trigger: GTCAGTAAGACACAGGAACCAACTAGAAGGGGCTTC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAACTTGCCCCAGATTTaGCCAGTGGGAAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPNLPQI*PVGSPF
Trigger: GAAGGGGCTTCCCACTGGCCAAATCTGGGGCAAGTT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAGTGGTTGTTCCCTCTaGCAGAAGCTGTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGSGCSL*QKLSNR
Trigger: CCTGTTGGACAGCTTCTGCCAGAGGGAACAACCACT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATTTCAGTGGTTGTTCCTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHFSGCS*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGGAACAACCACTGAA...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671940.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATTATCCATCTGCAGTaGGGAACAGCATCACCCAAA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAIIHLQ*GTASPK
Trigger: TTTGGGTGATGCTGTTCCTCACTGCAGATGGATAAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPDDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVANGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFARVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTATCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCACTAGCTATCCTCTaGCACCAGTTCTTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSLAIL*HQFFLL
Trigger: TAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCAGACAGATGGCATGCTaGAATGAGGCATATAGAAGA +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTRQMAC*NEAYRR
Trigger: TCTTCTATATGCCTCATTTCAGCATGCCATCTGTCT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTACTTTCATGAGCTGTTaGATCACCTTGTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLTFMSC*ITLCQP
Trigger: TGGCTGACACAAGGTGATTCAACAGCTCATGAAAGT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTGTCCCTTTTCTGGTTaGGGCTATATTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLCPFSG*GYIPSS
Trigger: AGAAGAGGGAATATAGCCTCAACCAGAAAAGGGACA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCGAACTGATTCAAGAATaGGCTGCAGACATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTELIQE*AADIVA
Trigger: TGCAACAATGTCTGCAGCTCATTCTTGAATCAGTTC...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTGCTTGTTGCTGAGGTaGGGGGCTGAGTTATCTGCA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFCLLLR*GAELSA
Trigger: TGCAGATAACTCAGCCCCTCACCTCAGCAACAAGCA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAGTATTTACAAGGGCTaGAGTCTCACTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFASIYKG*SLTGAE
Trigger: TTCTGCCCCAGTGAGACTGCAGCCCTTGTAAATACT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACGGAAAATTATCCATCTaGAGTGAGGAACAGCATCAC +
Preference number: 4 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHGKLSI*SEEQHH
Trigger: GTGATGCTGTTCCTCACTGCAGATGGATAATTTTCC...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAAGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSEGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKSCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESSCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNRERSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLRSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFARSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFRSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSDSGCC*VSLRVV
Trigger: GACGACACGGAGAGAGACGCAACAGCAACCTGAGTC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVACMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTTGTCAACGTGGGTATaGCTCTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYLSTWV*LCVCVC
Trigger: ACACACACACACACAGAGGCATACCCACGTTGACAA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAATCTTCTCTCTCTGGTaGTTTCCCACTGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRIFSLW*FPTGAS
Trigger: AGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGAT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAACAAAAGCACTCTCAATaGAGCAGCAGACCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNREQKHSQ*SSRPEG
Trigger: TCCTTCAGGTCTGCTGCTGCATTGAGAGTGCTTTTG...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACAAAAGCACTCTCAATaGAGCAGCAGACCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRQKHSQ*SSRPEG
Trigger: TCCTTCAGGTCTGCTGCTGCATTGAGAGTGCTTTTG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAGCAAGGCACATCTTTaGTTCCTGCTGACTTTCATG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVASKAHL*FLLTFM
Trigger: CATGAAAGTCAGCAGGAAGCAAAGATGTGCCTTGCT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGCTCCGTGGACATCATaGCTTTCTAAGCAAGCATTG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRAPWTS*LSKQAL
Trigger: CAATGCTTGCTTAGAAAGGCATGATGTCCACGGAGC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGTCACTATTTGGCTTTaGGCCATTTTCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAVTIWL*AIFVVI
Trigger: GATGACGACGAAAATGGCCCAAAGCCAAATAGTGAC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKTHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVATHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGCAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGAGTTTGTTTGGTTGTaGCAGATTGAGAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFEFVWL*QIERRF
Trigger: GAACCGCCTCTCAATCTGCCACAACCAAACAAACTC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGAGTTTGTTTGGTTGTaGCAGATTGAGAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVEFVWL*QIERRF
Trigger: GAACCGCCTCTCAATCTGCCACAACCAAACAAACTC...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGAGTTTGTTTGGTTGTaGCAGATTGAGAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNEFVWL*QIERRF
Trigger: GAACCGCCTCTCAATCTGCCACAACCAAACAAACTC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGAGTTTGTTTGGTTGTaGCAGATTGAGAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYEFVWL*QIERRF
Trigger: GAACCGCCTCTCAATCTGCCACAACCAAACAAACTC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCATCCACCATCACTCTaGCTTCCATACTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYHPPSL*LPYFSS
Trigger: GGAAGAGAAGTATGGAAGCCAGAGTGATGGTGGATG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTACTGGTGCTTCTCATTaGCCAAACCAATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFTGASH*PNQLGA
Trigger: AGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCTGGTGCTTTCCCACTaGTGCTTCTCATTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGLVLSH*CFSLAK
Trigger: TTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTCAATCTTCTCTCTCTaGTGCTTTCCCACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSIFSL*CFPTGA
Trigger: AGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCAATCTTCTCTCTCTaGTGCTTTCCCACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSIFSL*CFPTGA
Trigger: AGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCACTGGACTTCACTGTaGTTCCCCCAGTTACTGTTT +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLHWTSL*FPQLLF
Trigger: AAACAGTAACTGGGGGAACCACAGTGAAGTCCAGTG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCACTGGACTTCACTGTaGTTCCCCCAGTTACTGTTT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNHWTSL*FPQLLF
Trigger: AAACAGTAACTGGGGGAACCACAGTGAAGTCCAGTG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGCTGTGGAGCTGTGTTTaGAATTACTATTTATACCCA +
Preference number: 4 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRLWSCV*NYYLYP
Trigger: TGGGTATAAATAGTAATTCCAAACACAGCTCCACAG...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAGTGGTTGTTCCCTCTaGCAGAAGCTGTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPSGCSL*QKLSNR
Trigger: CCTGTTGGACAGCTTCTGCCAGAGGGAACAACCACT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCTTCAGAGAGGGGAGTaGCATGAAAATCTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLLQRGE*HENLSN
Trigger: GTTGGACAGATTTTCATGCCACTCCCCTCTCTGAAG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCAGGGCTCCCACAATaGTTTTCAGGCCTGGAATTA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSGLPQ*FSGLEL
Trigger: TAATTCCAGGCCTGAAAACCATTGTGGGAGCCCTGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640036.1
3UTR CAA 72 bp TGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGTCTTATTGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: CQGHLPFTQSHS*LTRGHCLIVGT
Trigger: AGTGCCTACAATAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAATTATCCATCTGCAGTaGGGAACAGCATCACCCAAA +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRIIHLQ*GTASPK
Trigger: TTTGGGTGATGCTGTTCCTCACTGCAGATGGATAAT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAAATTATCCATCTGCAGTaGGGAACAGCATCACCCAAA +
Preference number: 4 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSEIIHLQ*GTASPK
Trigger: TTTGGGTGATGCTGTTCCTCACTGCAGATGGATAAT...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESCQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACATGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTCQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATCCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVALNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTTCTGGTTCAAGAGTTTCTTCAGGTTCCACTACGGGCTGTTCTTCTACAGGTTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ASGSRVSSGSTTGCSSTGYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...ACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFANGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCTGGGACACACAGAATaGTGCAGAAGCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFLGHTE*CRSRES
Trigger: ACTCTCTCTGCTTCTGCATCATTCTGTGTGTCCCAG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTACTTTCATGAGCTGTTaGATCACCTTGTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLTFMSC*ITLCQP
Trigger: TGGCTGACACAAGGTGATTCAACAGCTCATGAAAGT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATGTTGCTTTAGGATTGTaGTGTTATGAAGAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNVALGL*CYEEAK
Trigger: CTTTGCCTCTTCATAACATCACAATCCTAAAGCAAC...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCGTTGCTTTAGGATTGTaGTGTTATGAAGAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTVALGL*CYEEAK
Trigger: CTTTGCCTCTTCATAACATCACAATCCTAAAGCAAC...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATGTTCCTGTGTCTTACTaGCATGACCTCATCATTCTT +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHVPVSY*HDLIIL
Trigger: AAGAATGATGAGGTCATGTCAGTAAGACACAGGAAC...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR TCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCAAAATATGATAGTGTaGACACGCAGACATAGGCAC +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLQNMIV*TRRHRH
Trigger: GTGCCTATGTCTGCGTGTTCACACTATCATATTTTG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTTTTGTCTAATGAAATaGGCTATTGCTCATGAGGCT +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWFCLMK*AIAHEA
Trigger: AGCCTCATGAGCAATAGCTCATTTCATTAGACAAAA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCTGTTTAGGGAAGAATaGATAGGCCCACAGACAGAT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNLFREE*IGPQTD
Trigger: ATCTGTCTGTGGGCCTATTCATTCTTCCCTAAACAG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR TCA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCCTATGAATAAACAATaGGAATACCAACCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWPMNKQ*EYQPVK
Trigger: CTTCACTGGTTGGTATTCTCATTGTTTATTCATAGG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGCTGAGGTGAGGGGCTaGGTTATCTGCAAATATGAG +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFAEVRG*VICKYE
Trigger: CTCATATTTGCAGATAACTCAGCCCCTCACCTCAGC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAGCTTCCATAACCCCTaGAGTGTTAATCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSFHNP*SVNLEE
Trigger: TTCCTCCAGATTAACACTTCAGGGGTTATGGAAGCT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635750.1
ENST00000641575.1
ENST00000641603.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTGTGTCTCCTACACTTaGCCTAGACAGCCTTACATA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNCVSYT*PRQPYI
Trigger: TATGTAAGGCTGTCTAGGTCAAGTGTAGGAGACACA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635750.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGCACACATACACACATaGACCAGAGACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFAHIHT*TRDLCS
Trigger: ACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGCACACATACACACATaGACCAGAGACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPAHIHT*TRDLCS
Trigger: ACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAGCACACATACACACATaGACCAGAGACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPAHIHT*TRDLCS
Trigger: ACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGC...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303395.9
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAGTATTTACAAGGGCTaGAGTCTCACTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGSIYKG*SLTGAE
Trigger: TTCTGCCCCAGTGAGACTGCAGCCCTTGTAAATACT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCAATGTGCCTTCAGTTaGAATTGTTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVQCAFS*NCSDSF
Trigger: GAAGGAATCTGAACAATTGCAACTGAAGGCACATTG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCGAGATGATAACAATGTaGCTTCAGTTGCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSEMITM*LQLQLF
Trigger: GAACAATTGCAACTGAAGGCACATTGTTATCATCTC...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCCTTTGCCTTTTCTTCTaGAATGCGTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTLCLFF*NASFNS
Trigger: GCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAG...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAGCTGTCTGAGAGCCTaGCTGCTGCACTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSCLRA*LLHWAL
Trigger: GAGAGCCCAGTGCAGCAGGCAGGCTCTCAGACAGCT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGRSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVANHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFACMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAATGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNRECMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTAGCAAGGCACATCTTTaGTTCCTGCTGACTTTCATG +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLSKAHL*FLLTFM
Trigger: CATGAAAGTCAGCAGGAAGCAAAGATGTGCCTTGCT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAGGACCGACACCAGGTTaGCAATTTTCCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPGPTPG*QFSTWL
Trigger: TAGCCAAGTGGAAAATTGGCAACCTGGTGTCGGTCC...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCGAAAACCTTCCAATATaGTTACCAAGTTTCCTACTG +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSENLPI*LPSFLL
Trigger: CAGTAGGAAACTTGGTAAGCATATTGGAAGGTTTTC...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636194.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGTCACTATTTGGCTTTaGGCCATTTTCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAVTIWL*AIFVVI
Trigger: GATGACGACGAAAATGGCCCAAAGCCAAATAGTGAC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGTCACTATTTGGCTTTaGGCCATTTTCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRVTIWL*AIFVVI
Trigger: GATGACGACGAAAATGGCCCAAAGCCAAATAGTGAC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGTCACTATTTGGCTTTaGGCCATTTTCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNVTIWL*AIFVVI
Trigger: GATGACGACGAAAATGGCCCAAAGCCAAATAGTGAC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGTCACTATTTGGCTTTaGGCCATTTTCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYVTIWL*AIFVVI
Trigger: GATGACGACGAAAATGGCCCAAAGCCAAATAGTGAC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGCCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTACCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCACCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFATHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNREIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLSGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTTGAAATTTGTTTCCTaGTCGAGGTATAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: NELEFVWLWQIERRFKRSLKFVS*SRYRLL
Trigger: CAAAAGCCTATACCTCGACCAGGAAACAAATTTCAA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTACCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFATWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGTCAATTCAGTCTTCTaGCGGTGGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKVNSVF*RWRVRG
Trigger: GCCCCTCACCCTCCACCGCCAGAAGACTGAATTGAC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACAGAAGCAGAGAGAGTaGCTCTGGAGGAGCAAACAC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSQKQRE*LWRSKH
Trigger: GTGTTTGCTCCTCCAGAGCCACTCTCTCTGCTTCTG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATCAATCTTCTCTCTCTaGTGCTTTCCCACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQSIFSL*CFPTGA
Trigger: AGCACCAGTGGGAAAGCACCAGAGAGAGAAGATTGA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTATATTCCCTCTTCTaGCTTCACCTGATGACAAGG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYLYSLF*LHLMTR
Trigger: CCTTGTCATCAGGTGAAGCCAGAAGAGGGAATATAG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACTATATTCCCTCTTCTaGCTTCACCTGATGACAAGG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRLYSLF*LHLMTR
Trigger: CCTTGTCATCAGGTGAAGCCAGAAGAGGGAATATAG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAGAAGCCCCTTCTAGTTaGTTCCTGTGTCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQEAPSS*FLCLTD
Trigger: GTCAGTAAGACACAGGAACCAACTAGAAGGGGCTTC...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACTTTAGCATCAAATACTaGGGTCTTAACCACTATGCC +
Preference number: 4 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHFSIKY*GLNHYA
Trigger: GGCATAGTGGTTAAGACCCCAGTATTTGATGCTAAA...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGCTGTGGAGCTGTGTTTaGAATTACTATTTATACCCA +
Preference number: 4 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMLWSCV*NYYLYP
Trigger: TGGGTATAAATAGTAATTCCAAACACAGCTCCACAG...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCCAGTAAAATACAAATaGGAGGACCGACACCAGGTT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNPVKYK*EDRHQV
Trigger: AACCTGGTGTCGGTCCTCCCATTTGTATTTTACTGG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAAGTGGTTGTTCCCTCTaGCAGAAGCTGTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSSGCSL*QKLSNR
Trigger: CCTGTTGGACAGCTTCTGCCAGAGGGAACAACCACT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTCATTTCAGTTTCAGTaGTTGTTCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVASFQFQ*LFPLAE
Trigger: TTCTGCCAGAGGGAACAACCACTGAAACTGAAATGA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATTCATTTCAGTTTCAGTaGTTGTTCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHSFQFQ*LFPLAE
Trigger: TTCTGCCAGAGGGAACAACCACTGAAACTGAAATGA...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636194.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTCATTTCAGTTTCAGTaGTTGTTCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLSFQFQ*LFPLAE
Trigger: TTCTGCCAGAGGGAACAACCACTGAAACTGAAATGA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATAGAGTATGTATAGCTTaGCTCCATAGGGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNRVCIA*LHRGGV
Trigger: AACACCACCCCTATGGAGCCAAGCTATACATACTCT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAAAGAGTATGTATAGCTTaGCTCCATAGGGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSERVCIA*LHRGGV
Trigger: AACACCACCCCTATGGAGCCAAGCTATACATACTCT...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCCTGAAGTGTTAATCTaGAGGAACAGTTCCATGAGT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLPEVLI*RNSSMS
Trigger: ACTCATGGAACTGTTCCTCCAGATTAACACTTCAGG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635750.1
ENST00000641575.1
ENST00000641603.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCCTGAAGTGTTAATCTaGAGGAACAGTTCCATGAGT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAPEVLI*RNSSMS
Trigger: ACTCATGGAACTGTTCCTCCAGATTAACACTTCAGG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635750.1
ENST00000641575.1
ENST00000641603.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATTATCCATCTGCAGTaGGGAACAGCATCACCCAAA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGIIHLQ*GTASPK
Trigger: TTTGGGTGATGCTGTTCCTCACTGCAGATGGATAAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAACTCTCTGGAATGTTCTaGGGCAGTTGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKLSGMF*GSCRCC
Trigger: GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAG...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCGATGACCTACTGGTCTaGCTCAGGTTGCTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCDDLLV*LRLLLR
Trigger: ACGCAACAGCAACCTGAGTCAGACCAGTAGGTCATC...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTGCCAGCATCCGGGATaGCCTACTGGTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCCQHPG*PTGLTQ
Trigger: CTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFALNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVASAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAATTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCAGGTTTGCACCCCTTaGAACTGGTCCCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCQVCTP*NWSLQS
Trigger: AGACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFADKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFATFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAACCCCCTACCTCCAGTaGCATATCTACCCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSTPYLQ*HIYPRF
Trigger: AAACCTAGGGTAGATATGTCACTGGAGGTAGGGGGT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTATCACTAGCTATCCTCTaGCACCAGTTCTTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVSLAIL*HQFFLL
Trigger: TAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGA...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACTGGGACACACAGAATaGTGCAGAAGCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSLGHTE*CRSRES
Trigger: ACTCTCTCTGCTTCTGCATCATTCTGTGTGTCCCAG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTATGCAGCAGCAGACCTaGAGGAGCAAGGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCMQQQT*RSKGRS
Trigger: ACTCCTCCCCTTGCTCCTTCAGGTCTGCTGCTGCAT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTAGACAGATGGCATGCTaGAATGAGGCATATAGAAGA +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLRQMAC*NEAYRR
Trigger: TCTTCTATATGCCTCATTTCAGCATGCCATCTGTCT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGACTTTCATGAGCTGTTaGATCACCTTGTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGTFMSC*ITLCQP
Trigger: TGGCTGACACAAGGTGATTCAACAGCTCATGAAAGT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTGTCCCTTTTCTGGTTaGGGCTATATTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGCPFSG*GYIPSS
Trigger: AGAAGAGGGAATATAGCCTCAACCAGAAAAGGGACA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTGTGTCTTACTGACATaGCCTCATCATTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVACVLLT*PHHSLK
Trigger: CTTCAAAGAATGATGAGGTCATGTCAGTAAGACACA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGAACTGATTCAAGAATaGGCTGCAGACATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYELIQE*AADIVA
Trigger: TGCAACAATGTCTGCAGCTCATTCTTGAATCAGTTC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCCATTTTTCTTTGAACTaGTTCAAGAATGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTHFSLN*FKNELQ
Trigger: CTGCAGCTCATTCTTGAATCAGTTCAAAGAAAAATG...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGCATTTTTCTTTGAACTaGTTCAAGAATGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMHFSLN*FKNELQ
Trigger: CTGCAGCTCATTCTTGAATCAGTTCAAAGAAAAATG...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR TCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAACAAAATATGATAGTGTaGACACGCAGACATAGGCAC +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNREQNMIV*TRRHRH
Trigger: GTGCCTATGTCTGCGTGTTCACACTATCATATTTTG...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATAGTGTCTGGGCTTTGTaGTACAGATATACAAACATA +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNSVWAL*YRYTNI
Trigger: TATGTTTGTATATCTGTATCACAAAGCCCAGACACT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATTCCAGTGCACACATaGAGAATATGCAATTACCAG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAIPVHT*RICNYQ
Trigger: CTGGTAATTGCATATTCTTCATGTGTGCACTGGAAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATATTCCAGTGCACACATaGAGAATATGCAATTACCAG +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHIPVHT*RICNYQ
Trigger: CTGGTAATTGCATATTCTTCATGTGTGCACTGGAAT...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAGTATTGGTAGCTTTTaGTGCTACTTTCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSIGSF*CYFHLP
Trigger: GGGGAGATGAAAGTAGCATCAAAAGCTACCAATACT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAATCACAGTGAACAATTaGATTGCTCCGTGGACATCA +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRITVNN*IAPWTS
Trigger: TGATGTCCACGGAGCAATTCAATTGTTCACTGTGAT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAAAAACCCATCACAGTaGACAATTGAATTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAKNPSQ*TIELLR
Trigger: ACGGAGCAATTCAATTGTTCACTGTGATGGGTTTTT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAGCTTCCATAACCCCTaGAGTGTTAATCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSFHNP*SVNLEE
Trigger: TTCCTCCAGATTAACACTTCAGGGGTTATGGAAGCT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635750.1
ENST00000641575.1
ENST00000641603.1
CDS-3UTR TCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATATCCATCCATCCTTTaGATGTGGCCCTCATCCCTT +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPYPSIL*MWPSSL
Trigger: AAGGGATGAGGGCCACATTCAAAGGATGGATGGATA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641603.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAGTATTTACAAGGGCTaGAGTCTCACTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPSIYKG*SLTGAE
Trigger: TTCTGCCCCAGTGAGACTGCAGCCCTTGTAAATACT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCAATGTGCCTTCAGTTaGAATTGTTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAQCAFS*NCSDSF
Trigger: GAAGGAATCTGAACAATTGCAACTGAAGGCACATTG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGGAGATGATAACAATGTaGCTTCAGTTGCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMEMITM*LQLQLF
Trigger: GAACAATTGCAACTGAAGGCACATTGTTATCATCTC...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGGAAAATTATCCATCTaGAGTGAGGAACAGCATCAC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNGKLSI*SEEQHH
Trigger: GTGATGCTGTTCCTCACTGCAGATGGATAATTTTCC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFRSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPRSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAAATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSEILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGCTGGCTATACTCATTaGTCGTTGCCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSAGYTH*SLPLGR
Trigger: CCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFANHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRNHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYNHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLNHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVACDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATTGTCAACGTGGGTATaGCTCTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPLSTWV*LCVCVC
Trigger: ACACACACACACACAGAGGCATACCCACGTTGACAA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAATCTTCTCTCTCTGGTaGTTTCCCACTGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPIFSLW*FPTGAS
Trigger: AGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGAT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAGCAAGGCACATCTTTaGTTCCTGCTGACTTTCATG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGSKAHL*FLLTFM
Trigger: CATGAAAGTCAGCAGGAAGCAAAGATGTGCCTTGCT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGGGACCGACACCAGGTTaGCAATTTTCCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: DLTTLESLYTAFSETSFWGPTPG*QFSTWL
Trigger: TAGCCAAGTGGAAAATTGGCAACCTGGTGTCGGTCC...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGACTGATGATGTCCCATaGCACCTTATTTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGTDDVP*HLISLV
Trigger: CACAAGGGAAATAAGGTGGCATGGGACATCATCAGT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAGTCACTATTTGGCTTTaGGCCATTTTCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQVTIWL*AIFVVI
Trigger: GATGACGACGAAAATGGCCCAAAGCCAAATAGTGAC...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGTHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAATGCTCAACAAAGACTaGTGTGGGGAGGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLMLNKD*CGEEYL
Trigger: GAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCAT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGTCATTTCAGTTTCAGTaGTTGTTCCATTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMSFQFQ*LFHCHQ
Trigger: CTGATGACAATGGAACAACCACTGAAACTGAAATGA...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCCGGTCATAGGAAGGTaGACAAGCTGCAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCPVIGR*TSCSGH
Trigger: ATGTCCACTGCAGCTTGTCCACCTTCCTATGACCGG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATATGTTTTTCCACAATTaGCTTTGTCACCCGGTCATA +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHMFFHN*LCHPVI
Trigger: TATGACCGGGTGACAAAGCCAATTGTGGAAAAACAT...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAACGACTTTGTGTAGCTaGGAGGGCCATGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKTTLCS*EGHVVA
Trigger: GGCAACCACATGGCCCTCCCAGCTACACAAAGTCGT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCACATCCACCATCACTCTaGCTTCCATACTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPHPPSL*LPYFSS
Trigger: GGAAGAGAAGTATGGAAGCCAGAGTGATGGTGGATG...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATTGGCCAAACCAATTaGGAGCTCAAAGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGIGQTN*ELKGRR
Trigger: TCTCCTACCTTTGAGCTCCCAATTGGTTTGGCCAAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTACAGGCAGGAGACAGATaGCATGCTGAAATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLQAGDR*HAEMRH
Trigger: ATGCCTCATTTCAGCATGCCATCTGTCTCCTGCCTG...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTACACTGGACTTCACTGTaGTTCCCCCAGTTACTGTTT +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVHWTSL*FPQLLF
Trigger: AAACAGTAACTGGGGGAACCACAGTGAAGTCCAGTG...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCGTTAATTTTACTATCTaGACCACCCGAGTAACCTTT +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTVNFTI*TTRVTF
Trigger: AAAGGTTACTCGGGTGGTCCAGATAGTAAAATTAAC...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTTACTGTCCCTTTTCTaGTTGAGGCTATATTCCCTC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFALLSLF*LRLYSL
Trigger: GAGGGAATATAGCCTCAACCAGAAAAGGGACAGTAA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGAAGCCCCTTCTAGTTaGTTCCTGTGTCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPEAPSS*FLCLTD
Trigger: GTCAGTAAGACACAGGAACCAACTAGAAGGGGCTTC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATCTGTGGAGCTGTGTTTaGAATTACTATTTATACCCA +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNLWSCV*NYYLYP
Trigger: TGGGTATAAATAGTAATTCCAAACACAGCTCCACAG...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAAGGGTGCTGCTCTGTaGAGCTGTGTTTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFKGAAL*SCVWNY
Trigger: GTAATTCCAAACACAGCTCCACAGAGCAGCACCCTT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAAAGGGTGCTGCTCTGTaGAGCTGTGTTTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPKGAAL*SCVWNY
Trigger: GTAATTCCAAACACAGCTCCACAGAGCAGCACCCTT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTTAAAAATGCACATTTaGCCGAACAGTAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYLKMHI*PNSSSP
Trigger: TGGGCTGCTACTGTTCGGCCAAATGTGCATTTTTAA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCCACCCCATCCAAGTTaGAGCAAGATTATCCCTCAT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPPPHPS*SKIIPH
Trigger: ATGAGGGATAATCTTGCTCCAACTTGGATGGGGTGG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637038.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTATTATCCATCTGCAGTaGGGAACAGCATCACCCAAA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFIIHLQ*GTASPK
Trigger: TTTGGGTGATGCTGTTCCTCACTGCAGATGGATAAT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTTCTGGTTCAAGAGTTTCTTCAGGTTCCACTACGGGCTGTTCTTCTACAGGTATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: ASGSRVSSGSTTGCSSTGIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...ACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFASAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTGGTTGTGGCAGATTaGGAGGCGGTTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLVVAD*EAVQAQ
Trigger: CTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFALQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAACTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNRELQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATCACTAGCTATCCTCTaGCACCAGTTCTTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSSLAIL*HQFFLL
Trigger: TAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTGTGTCTTACTGACATaGCCTCATCATTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNCVLLT*PHHSLK
Trigger: CTTCAAAGAATGATGAGGTCATGTCAGTAAGACACA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTACTATCATTTATTTTaGTGCTCAACTTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAYYHLF*CSTCPR
Trigger: TCTGGGGCAAGTTGAGCATCAAAATAAATGATAGTA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTATTCCAGTGCACACATaGAGAATATGCAATTACCAG +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFIPVHT*RICNYQ
Trigger: CTGGTAATTGCATATTCTTCATGTGTGCACTGGAAT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGACTTTCATCTCCCCATaGTCTTGGTACTTACTTAAA +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKTFISP*SWYLLK
Trigger: TTTAAGTAAGTACCAAGATCATGGGGAGATGAAAGT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR TCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACCTCTTGCTTGTTGCTaGGGTGAGGGGCTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTPLACC*GEGLSY
Trigger: ATAACTCAGCCCCTCACCTCAGCAACAAGCAAGAGG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAGCTTCCATAACCCCTaGAGTGTTAATCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPSFHNP*SVNLEE
Trigger: TTCCTCCAGATTAACACTTCAGGGGTTATGGAAGCT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635750.1
ENST00000641575.1
ENST00000641603.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAAGTATTTACAAGGGCTaGAGTCTCACTGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSSIYKG*SLTGAE
Trigger: TTCTGCCCCAGTGAGACTGCAGCCCTTGTAAATACT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCAATGTGCCTTCAGTTaGAATTGTTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYQCAFS*NCSDSF
Trigger: GAAGGAATCTGAACAATTGCAACTGAAGGCACATTG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCAATGTGCCTTCAGTTaGAATTGTTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLQCAFS*NCSDSF
Trigger: GAAGGAATCTGAACAATTGCAACTGAAGGCACATTG...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCAATGTGCCTTCAGTTaGAATTGTTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLQCAFS*NCSDSF
Trigger: GAAGGAATCTGAACAATTGCAACTGAAGGCACATTG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATGAGATGATAACAATGTaGCTTCAGTTGCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHEMITM*LQLQLF
Trigger: GAACAATTGCAACTGAAGGCACATTGTTATCATCTC...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCTTTGCCTTTTCTTCTaGAATGCGTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFALCLFF*NASFNS
Trigger: GCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGCTTTGCCTTTTCTTCTaGAATGCGTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVLCLFF*NASFNS
Trigger: GCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAG...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTACTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAATGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKWSDSG*CCVSLR
Trigger: ACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCA...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQNHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCCTGTTCTTCTACAGGTaGGCCGATGTCCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESLFFYR*ADVHSA
Trigger: AGCACTGTGGACATCGGCGCACCTGTAGAAGAACAG...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGGAAGGTGGACAAGCTaGAGTGGACATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESGRWTS*SGHGQI
Trigger: GATCTGACCATGTCCACTGCAGCTTGTCCACCTTCC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 4 (lower is better)
Translates to: LTENTPAACNSGRSLPPTMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGTGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: DLTTLESLYTAFSETSFWCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATTGTCAACGTGGGTATaGCTCTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSLSTWV*LCVCVC
Trigger: ACACACACACACACAGAGGCATACCCACGTTGACAA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPTHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTCCGGGATGACCTACTaGTCTGACTCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESSGMTY*SDSGCC
Trigger: ACAGCAACCTGAGTCAGACCAGTAGGTCATCCCGGA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAACTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNRELLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTTGAAATTTGTTTCCTaGTCGAGGTATAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVALKFVS*SRYRLL
Trigger: CAAAAGCCTATACCTCGACCAGGAAACAAATTTCAA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTTGAAATTTGTTTCCTaGTCGAGGTATAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLLKFVS*SRYRLL
Trigger: CAAAAGCCTATACCTCGACCAGGAAACAAATTTCAA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAGAGTTTGTTTGGTTGTaGCAGATTGAGAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLEFVWL*QIERRF
Trigger: GAACCGCCTCTCAATCTGCCACAACCAAACAAACTC...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTATGTTTTTCCACAATTaGCTTTGTCACCCGGTCATA +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAMFFHN*LCHPVI
Trigger: TATGACCGGGTGACAAAGCCAATTGTGGAAAAACAT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTATGTTTTTCCACAATTaGCTTTGTCACCCGGTCATA +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFMFFHN*LCHPVI
Trigger: TATGACCGGGTGACAAAGCCAATTGTGGAAAAACAT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACATCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGTTTTGTTGTCAACGTaGGTATGCCTCTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFVLLST*VCLCVC
Trigger: ACACACACAGAGGCATACCCACGTTGACAACAAAAC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAGTTTTGTTGTCAACGTaGGTATGCCTCTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPVLLST*VCLCVC
Trigger: ACACACACAGAGGCATACCCACGTTGACAACAAAAC...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACAGAAGCAGAGAGAGTaGCTCTGGAGGAGCAAACAC +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTQKQRE*LWRSKH
Trigger: GTGTTTGCTCCTCCAGAGCCACTCTCTCTGCTTCTG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAACTGGTGCTTCTCATTaGCCAAACCAATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSTGASH*PNQLGA
Trigger: AGCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACACTGGACTTCACTGTaGTTCCCCCAGTTACTGTTT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSHWTSL*FPQLLF
Trigger: AAACAGTAACTGGGGGAACCACAGTGAAGTCCAGTG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGAAGCCCCTTCTAGTTaGTTCCTGTGTCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSEAPSS*FLCLTD
Trigger: GTCAGTAAGACACAGGAACCAACTAGAAGGGGCTTC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTTTAGCATCAAATACTaGGGTCTTAACCACTATGCC +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFFSIKY*GLNHYA
Trigger: GGCATAGTGGTTAAGACCCCAGTATTTGATGCTAAA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTTTAGCATCAAATACTaGGGTCTTAACCACTATGCC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNFSIKY*GLNHYA
Trigger: GGCATAGTGGTTAAGACCCCAGTATTTGATGCTAAA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTTTAGCATCAAATACTaGGGTCTTAACCACTATGCC +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYFSIKY*GLNHYA
Trigger: GGCATAGTGGTTAAGACCCCAGTATTTGATGCTAAA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCTGTGGAGCTGTGTTTaGAATTACTATTTATACCCA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVALWSCV*NYYLYP
Trigger: TGGGTATAAATAGTAATTCCAAACACAGCTCCACAG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAAAGGGTGCTGCTCTGTaGAGCTGTGTTTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLKGAAL*SCVWNY
Trigger: GTAATTCCAAACACAGCTCCACAGAGCAGCACCCTT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTGGTTACTAGACTTTTaGATTTCATGCACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNWLLDF*ISCTSK
Trigger: TTTACTGGTGCATGAAATCCAAAAGTCTAGTAACCA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCAGTGGTTGTTCCCTCTaGCAGAAGCTGTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESSGCSL*QKLSNR
Trigger: CCTGTTGGACAGCTTCTGCCAGAGGGAACAACCACT...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641575.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTCATTTCAGTTTCAGTaGTTGTTCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSFQFQ*LFPLAE
Trigger: TTCTGCCAGAGGGAACAACCACTGAAACTGAAATGA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
3UTR CAA 72 bp AACTATTCGGAAACACGTCCTTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTCCACATTGATTTGACA +
Preference number: 4 (lower is better)
Translates to: NYSETRPSQVPP*FSSAFFHIDLT
Trigger: TGTCAAATCAATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTATATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNREIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACTGGTCCCTACAGTCTaGCTAGCCATTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTLVPTV*LAIVHL
Trigger: AAGATGCACAATGGCTAGTCAGACTGTAGGGACCAG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTCTGGCGGTGGAGGGTaGGGGGCAATATTCACTATT +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSGGGG*GAIFTI
Trigger: AATAGTGAATATTGCCCCTCACCCTCCACCGCCAGA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAACCCCCTACCTCCAGTaGCATATCTACCCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTTPYLQ*HIYPRF
Trigger: AAACCTAGGGTAGATATGTCACTGGAGGTAGGGGGT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGACCCCCTACCTCCAGTaGCATATCTACCCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVTPYLQ*HIYPRF
Trigger: AAACCTAGGGTAGATATGTCACTGGAGGTAGGGGGT...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAGACAGATGGCATGCTaGAATGAGGCATATAGAAGA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPRQMAC*NEAYRR
Trigger: TCTTCTATATGCCTCATTTCAGCATGCCATCTGTCT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAAGACAGATGGCATGCTaGAATGAGGCATATAGAAGA +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPRQMAC*NEAYRR
Trigger: TCTTCTATATGCCTCATTTCAGCATGCCATCTGTCT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAACTTTCATGAGCTGTTaGATCACCTTGTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSTFMSC*ITLCQP
Trigger: TGGCTGACACAAGGTGATTCAACAGCTCATGAAAGT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATGTCCCTTTTCTGGTTaGGGCTATATTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSCPFSG*GYIPSS
Trigger: AGAAGAGGGAATATAGCCTCAACCAGAAAAGGGACA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGTTGCTTTAGGATTGTaGTGTTATGAAGAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGVALGL*CYEEAK
Trigger: CTTTGCCTCTTCATAACATCACAATCCTAAAGCAAC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATGTGTCTTACTGACATaGCCTCATCATTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQCVLLT*PHHSLK
Trigger: CTTCAAAGAATGATGAGGTCATGTCAGTAAGACACA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCATTTTTCTTTGAACTaGTTCAAGAATGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYHFSLN*FKNELQ
Trigger: CTGCAGCTCATTCTTGAATCAGTTCAAAGAAAAATG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCATTTTTCTTTGAACTaGTTCAAGAATGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAHFSLN*FKNELQ
Trigger: CTGCAGCTCATTCTTGAATCAGTTCAAAGAAAAATG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCACAAAATATGATAGTGTaGACACGCAGACATAGGCAC +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPQNMIV*TRRHRH
Trigger: GTGCCTATGTCTGCGTGTTCACACTATCATATTTTG...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATAGTGTCTGGGCTTTGTaGTACAGATATACAAACATA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSVWAL*YRYTNI
Trigger: TATGTTTGTATATCTGTATCACAAAGCCCAGACACT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATTCCAGTGCACACATaGAGAATATGCAATTACCAG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGIPVHT*RICNYQ
Trigger: CTGGTAATTGCATATTCTTCATGTGTGCACTGGAAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATGTGTTCCAGGCTTTaGAGTATAGTACTGATGATG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGMCSRL*SIVLMM
Trigger: CATCATCAGTACTATACTTCAAAGCCTGGAACACAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR TCA 90 bp AGGCTGGAGTTCCACAAAGTTTTGAAGAGCAAAGTTGGAATGAGCATGAATTTCTTAGGTCTTGGAGCCTaGAAGAGGATTTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: RLEFHKVLKSKVGMSMNFLGLGA*KRISGI
Trigger: GATTCCAGAAATCCTCTTTCAGGCTCCAAGACCTAA...GAAATTCATGCTCATTCCAACTTTGCTCTTCAAAACTTTGTGGAACTCCAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635893.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGGAAAATTATCCATCTaGAGTGAGGAACAGCATCAC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFGKLSI*SEEQHH
Trigger: GTGATGCTGTTCCTCACTGCAGATGGATAATTTTCC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTAGCCTTATTCATAATTaGCCAAACCTGATTAAAAGG +
Preference number: 4 (lower is better)
Translates to: APLETGPYSLTSHCASYLSLIHN*PNLIKR
Trigger: CCTTTTAATCAGGTTTGGGCAATTATGAATAAGGCT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303395.9
ENST00000636194.1
ENST00000671940.1
CDS-3UTR GCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTATACTCATTGCTCGTTaGCTTTGGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFILIAR*LWEGSS
Trigger: AGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTAT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPNHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 4 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GCTTCTGGTTCAAGAGTTTCTTCAGGTTCCACTACGGGCTGTTCTTCTACAGGTATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 4 (lower is better)
Translates to: ASGSRVSSGSTTGCSSTGMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...ACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACATCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCATCTTCTCTCTCTGGTaGTTTCCCACTGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCIFSLW*FPTGAS
Trigger: AGAAGCACCAGTGGGAAAGCACCAGAGAGAGAAGAT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAAGCAAGGCACATCTTTaGTTCCTGCTGACTTTCATG +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLSKAHL*FLLTFM
Trigger: CATGAAAGTCAGCAGGAAGCAAAGATGTGCCTTGCT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAGGACCGACACCAGGTTaGCAATTTTCCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTGPTPG*QFSTWL
Trigger: TAGCCAAGTGGAAAATTGGCAACCTGGTGTCGGTCC...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATAAACATACAAACTTATaGAGTAGAGTTGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNKHTNL*SRVVCP
Trigger: GGGACAGACAACTCTACTGCATAAGTTTGTATGTTT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTAAACATACAAACTTATaGAGTAGAGTTGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAKHTNL*SRVVCP
Trigger: GGGACAGACAACTCTACTGCATAAGTTTGTATGTTT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGTGATTATCTCTGATTaGTGGGATGATCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAVIISD*WDDLES
Trigger: AGATTCAAGATCATCCCAGCAATCAGAGATAATCAC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGCCTTCAAGTTTAAATaGCTCATTCTGAAAAGACGA +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYAFKFK*LILKRR
Trigger: TCGTCTTTTCAGAATGAGGCATTTAAACTTGAAGGC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGTCACTATTTGGCTTTaGGCCATTTTCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSVTIWL*AIFVVI
Trigger: GATGACGACGAAAATGGCCCAAAGCCAAATAGTGAC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTACCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCTGCACTGGGCTCTCTaGAATGTTCTGAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLHWAL*NVLRQL
Trigger: CAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAATCGGTTCCCTTCAATaGAGAAGCGAAAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSIGSLQ*RSENLS
Trigger: GGAAAGGTTTTCGCTTCTCCATTGAAGGGAACCGAT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAATCATTTCAGTTTCAGTaGTTGTTCCATTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNRESFQFQ*LFHCHQ
Trigger: CTGATGACAATGGAACAACCACTGAAACTGAAATGA...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTTGAAATTTGTTTCCTaGTCGAGGTATAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYLKFVS*SRYRLL
Trigger: CAAAAGCCTATACCTCGACCAGGAAACAAATTTCAA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCGTGGACAAGCTGCAGTaGACATGGTCAGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCVDKLQ*TWSDQF
Trigger: AAACTGATCTGACCATGTCCACTGCAGCTTGTCCAC...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTCAGTCTTCTGGCGGTaGAGGGTGAGGGGCAATATT +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSVFWR*RVRGNI
Trigger: AATATTGCCCCTCACCCTCCACCGCCAGAAGACTGA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCATCCACCATCACTCTaGCTTCCATACTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCHPPSL*LPYFSS
Trigger: GGAAGAGAAGTATGGAAGCCAGAGTGATGGTGGATG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAATTGGCCAAACCAATTaGGAGCTCAAAGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLIGQTN*ELKGRR
Trigger: TCTCCTACCTTTGAGCTCCCAATTGGTTTGGCCAAT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAATTGGCCAAACCAATTaGGAGCTCAAAGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSIGQTN*ELKGRR
Trigger: TCTCCTACCTTTGAGCTCCCAATTGGTTTGGCCAAT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCCTGGTGCTTTCCCACTaGTGCTTCTCATTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESLVLSH*CFSLAK
Trigger: TTTGGCCAATGAGAAGCACCAGTGGGAAAGCACCAG...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCCAGGCAGGAGACAGATaGCATGCTGAAATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESQAGDR*HAEMRH
Trigger: ATGCCTCATTTCAGCATGCCATCTGTCTCCTGCCTG...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACTATATTCCCTCTTCTaGCTTCACCTGATGACAAGG +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSLYSLF*LHLMTR
Trigger: CCTTGTCATCAGGTGAAGCCAGAAGAGGGAATATAG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCAAGGGTGCTGCTCTGTaGAGCTGTGTTTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCKGAAL*SCVWNY
Trigger: GTAATTCCAAACACAGCTCCACAGAGCAGCACCCTT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACCAGTAAAATACAAATaGGAGGACCGACACCAGGTT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSPVKYK*EDRHQV
Trigger: AACCTGGTGTCGGTCCTCCCATTTGTATTTTACTGG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGCCAGTAAAATACAAATaGGAGGACCGACACCAGGTT +
Preference number: 4 (lower is better)
Translates to: DLTTLESLYTAFSETSFWPVKYK*EDRHQV
Trigger: AACCTGGTGTCGGTCCTCCCATTTGTATTTTACTGG...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTACCAGTAAAATACAAATaGGAGGACCGACACCAGGTT +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLPVKYK*EDRHQV
Trigger: AACCTGGTGTCGGTCCTCCCATTTGTATTTTACTGG...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTCATTTCAGTTTCAGTaGTTGTTCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSFQFQ*LFPLAE
Trigger: TTCTGCCAGAGGGAACAACCACTGAAACTGAAATGA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGCAGTACCCAATTCATaGTGGTTTAGAAACACATTT +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNREAVPNS*WFRNTF
Trigger: AAATGTGTTTCTAAACCACCATGAATTGGGTACTGC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAATAATTGCCCAAACCTaGAAGCAACCAAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPIIAQT*KQPRCP
Trigger: AGGACATCTTGGTTGCTTCCAGGTTTGGGCAATTAT...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641575.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGTTGAATGTGGCAACTTaGAGCAAAGAGAGATACCCA +
Preference number: 4 (lower is better)
Translates to: DLTTLESLYTAFSETSFWLNVAT*SKERYP
Trigger: TGGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAA...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AGGCTGGAGTTCCACAAAGTTTTGAAGAGCAAAGTTGGAATGAGCATGAATTTCTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RLEFHKVLKSKVGMSMNFYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...GAAATTCATGCTCATTCCAACTTTGCTCTTCAAAACTTTGTGGAACTCCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635893.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTACACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAGCGCAGCTGCAAACTaGGATAATTTTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPSAAAN*DNFSNS
Trigger: GGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCTCCAAACATTTGAATaGAGTTTGCACCTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPLQTFE*SLHLLR
Trigger: TCTTAGCAGGTGCAAACTTCATTCAAATGTTTGGAG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCTGGGACACACAGAATaGTGCAGAAGCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLGHTE*CRSRES
Trigger: ACTCTCTCTGCTTCTGCATCATTCTGTGTGTCCCAG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGTTCCTGTGTCTTACTaGCATGACCTCATCATTCTT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSVPVSY*HDLIIL
Trigger: AAGAATGATGAGGTCATGTCAGTAAGACACAGGAAC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATACTATCATTTATTTTaGTGCTCAACTTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQYYHLF*CSTCPR
Trigger: TCTGGGGCAAGTTGAGCATCAAAATAAATGATAGTA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGAACTGATTCAAGAATaGGCTGCAGACATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSELIQE*AADIVA
Trigger: TGCAACAATGTCTGCAGCTCATTCTTGAATCAGTTC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAAAGGCTATATACAATaGGCTGGATATAAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPKGYIQ*AGYKAS
Trigger: ACTGGCCTTATATCCAGCTCATTGTATATAGCCTTT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR TCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGAGAATACCAACCAGTaGAGAAATCATGCGTTAAAA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGENTNQ*RNHALK
Trigger: TTTTAACGCATGATTTCTTCACTGGTTGGTATTCTC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAAAAACCCATCACAGTaGACAATTGAATTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPKNPSQ*TIELLR
Trigger: ACGGAGCAATTCAATTGTTCACTGTGATGGGTTTTT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGAGATGATAACAATGTaGCTTCAGTTGCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGEMITM*LQLQLF
Trigger: GAACAATTGCAACTGAAGGCACATTGTTATCATCTC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAGCCTTATTCATAATTaGCCAAACCTGATTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSLIHN*PNLIKR
Trigger: CCTTTTAATCAGGTTTGGGCAATTATGAATAAGGCT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303395.9
ENST00000636194.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCTTTGCCTTTTCTTCTaGAATGCGTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPLCLFF*NASFNS
Trigger: GCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCTTTGCCTTTTCTTCTaGAATGCGTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFLCLFF*NASFNS
Trigger: GCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCCTCTGGACATTGGCCTaGATCAGAGCTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESLWTLA*IRAIST
Trigger: TGTGGAAATAGCTCTGATGCAGGCCAATGTCCAGAG...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTGCTGCCTGCTGAGCTaGCTCCTGTTGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCCCLLS*LLLLFK
Trigger: CTTAAAAAGCAACAGGAGGCAGCTCAGCAGGCAGCA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLNHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAAATCACTGGCGATCTTaGAGACACAATCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSNHWRS*RHNLCS
Trigger: GCTACAAAGATTGTGTCTGCAAGATCGCCAGTGATT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTCATCTTTGCCTTCTTaGTCATGTTTTTCCACAATT +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLSSLPS*SCFSTI
Trigger: AATTGTGGAAAAACATGAGCAAGAAGGCAAAGATGA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCATCTTTGCCTTCTTaGTCATGTTTTTCCACAATT +
Preference number: 4 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSSLPS*SCFSTI
Trigger: AATTGTGGAAAAACATGAGCAAGAAGGCAAAGATGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAATCATCTTTGCCTTCTTaGTCATGTTTTTCCACAATT +
Preference number: 4 (lower is better)
Translates to: PPRITSYPLTPVLPPNRESSLPS*SCFSTI
Trigger: AATTGTGGAAAAACATGAGCAAGAAGGCAAAGATGA...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTTCATCTTTGCCTTCTTaGTCATGTTTTTCCACAATT +
Preference number: 4 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLSSLPS*SCFSTI
Trigger: AATTGTGGAAAAACATGAGCAAGAAGGCAAAGATGA...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 4 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAATGCAGCATGCCCTCATaGAAACCACGACTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKCSMPS*KPRLCV
Trigger: TACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCA...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTCTCTAAGTGCAGCATaGCCTCATGCAAACCACGAC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSLSAA*PHANHD
Trigger: GTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGCAAAAGCACTCTCAATaGAGCAGCAGACCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVQKHSQ*SSRPEG
Trigger: TCCTTCAGGTCTGCTGCTGCATTGAGAGTGCTTTTG...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCCTCCAAGGAAGCATTaGTGGGAGGCCATTGTATAC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCPPRKH*WEAIVY
Trigger: GTATACAATGGCCTCCCACCAATGCTTCCTTGGAGG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTCATTTCAGTTTCAGTaGTTGTTCCATTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGSFQFQ*LFHCHQ
Trigger: CTGATGACAATGGAACAACCACTGAAACTGAAATGA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCTTCTAGAAAGTCCATaGAAACGTGGAAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPLLESP*KRGKNL
Trigger: CAAGTTCTTTCCACGTTTCCATGGACTTTCTAGAAG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTTGAAATTTGTTTCCTaGTCGAGGTATAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGLKFVS*SRYRLL
Trigger: CAAAAGCCTATACCTCGACCAGGAAACAAATTTCAA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAGAGTTTGTTTGGTTGTaGCAGATTGAGAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTEFVWL*QIERRF
Trigger: GAACCGCCTCTCAATCTGCCACAACCAAACAAACTC...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCTATATTCCCTCTTCTaGCTTCACCTGATGACAAGG +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCLYSLF*LHLMTR
Trigger: CCTTGTCATCAGGTGAAGCCAGAAGAGGGAATATAG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATTACTGTCCCTTTTCTaGTTGAGGCTATATTCCCTC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLLLSLF*LRLYSL
Trigger: GAGGGAATATAGCCTCAACCAGAAAAGGGACAGTAA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTGGTTACTAGACTTTTaGATTTCATGCACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNWLLDF*ISCTSK
Trigger: TTTACTGGTGCATGAAATCCAAAAGTCTAGTAACCA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTTGGTTACTAGACTTTTaGATTTCATGCACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLWLLDF*ISCTSK
Trigger: TTTACTGGTGCATGAAATCCAAAAGTCTAGTAACCA...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CCA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTGGTTACTAGACTTTTaGATTTCATGCACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: TWSRGWISQNKINKAPPLWLLDF*ISCTSK
Trigger: TTTACTGGTGCATGAAATCCAAAAGTCTAGTAACCA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATCATTTCAGTTTCAGTaGTTGTTCCCTCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSSFQFQ*LFPLAE
Trigger: TTCTGCCAGAGGGAACAACCACTGAAACTGAAATGA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCCTTCAGTAGGTGAATaGATAAATAACCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPPSVGE*INNPQK
Trigger: CTTTTGGGGGTTATTTATCCATTCACCTACTGAAGG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000641575.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGAAAACCTTTCCTCCTaGTGCTGTCCTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCENLSS*CCPQIQ
Trigger: CTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGCCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 4 (lower is better)
Translates to: DLTTLESLYTAFSETSFWPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAGAGTCACAGTTTGCTaGCAAGGGGTCACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCRVTVC*QGVTVL
Trigger: TAAGACAGTGACCCCTTGTCAGCAAACTGTGACTCT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCACTTTTTCTCATGCATaGTCTCTAAGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCTFSHA*SLSAAC
Trigger: GCATGCTGCACTTAGAGATCATGCATGAGAAAAAGT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTCACTAGCTATCCTCTaGCACCAGTTCTTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSLAIL*HQFFLL
Trigger: TAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTGTCCCTTTTCTGGTTaGGGCTATATTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESCPFSG*GYIPSS
Trigger: AGAAGAGGGAATATAGCCTCAACCAGAAAAGGGACA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCGAACTGATTCAAGAATaGGCTGCAGACATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCELIQE*AADIVA
Trigger: TGCAACAATGTCTGCAGCTCATTCTTGAATCAGTTC...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCATTTTTCTTTGAACTaGTTCAAGAATGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFHFSLN*FKNELQ
Trigger: CTGCAGCTCATTCTTGAATCAGTTCAAAGAAAAATG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCAAAATATGATAGTGTaGACACGCAGACATAGGCAC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCQNMIV*TRRHRH
Trigger: GTGCCTATGTCTGCGTGTTCACACTATCATATTTTG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAGTGTCTGGGCTTTGTaGTACAGATATACAAACATA +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSVWAL*YRYTNI
Trigger: TATGTTTGTATATCTGTATCACAAAGCCCAGACACT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAAGTGTCTGGGCTTTGTaGTACAGATATACAAACATA +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVSVWAL*YRYTNI
Trigger: TATGTTTGTATATCTGTATCACAAAGCCCAGACACT...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAAAAAACCCATCACAGTaGACAATTGAATTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLKNPSQ*TIELLR
Trigger: ACGGAGCAATTCAATTGTTCACTGTGATGGGTTTTT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGAGATGATAACAATGTaGCTTCAGTTGCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPEMITM*LQLQLF
Trigger: GAACAATTGCAACTGAAGGCACATTGTTATCATCTC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAGAGATGATAACAATGTaGCTTCAGTTGCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVEMITM*LQLQLF
Trigger: GAACAATTGCAACTGAAGGCACATTGTTATCATCTC...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGGTACAAGCACTGTTTaGTCCATCTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCGTSTV*SILSSC
Trigger: GCAGGATGACAAGATGGAGCAAACAGTGCTTGTACC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAGATCCCACATCCTTTaGTCGCCCTCTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCRSHIL*SPSKAE
Trigger: TTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTCATCTTTGCCTTCTTaGTCATGTTTTTCCACAATT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGSSLPS*SCFSTI
Trigger: AATTGTGGAAAAACATGAGCAAGAAGGCAAAGATGA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATCATCTTTGCCTTCTTaGTCATGTTTTTCCACAATT +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQSSLPS*SCFSTI
Trigger: AATTGTGGAAAAACATGAGCAAGAAGGCAAAGATGA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 4 (lower is better)
Translates to: LSGIFPCARKNSTISSTQMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACATGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTGCATGATCTCTAAGTaGAGCATGCCCTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESCMISK*SMPSCK
Trigger: TTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 4 (lower is better)
Translates to: DLTTLESLYTAFSETSFWEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAAACATACAAACTTATaGAGTAGAGTTGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFKHTNL*SRVVCP
Trigger: GGGACAGACAACTCTACTGCATAAGTTTGTATGTTT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAACCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCCCAAGGAAGCATTGGTaGGAGGCCATTGTATACATT +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESPRKHW*EAIVYI
Trigger: AATGTATACAATGGCCTCCCACCAATGCTTCCTTGG...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKTHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESTHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCAACAAAGACTGGTGTaGGGAGGAGTACCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCQQRLV*GGVPLF
Trigger: GAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCAAGTCCATGGAAACGTaGAAAGAACTTGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCKSMET*KELDLL
Trigger: GAGAAGGTCAAGTTCTTTCCACGTTTCCATGGACTT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTTGAAATTTGTTTCCTaGTCGAGGTATAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPLKFVS*SRYRLL
Trigger: CAAAAGCCTATACCTCGACCAGGAAACAAATTTCAA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGAGCTGGAGTTTGTTTaGTTGTGGCAGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCELEFV*LWQIER
Trigger: CCTCTCAATCTGCCACAACCAAACAAACTCCAGCTC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAATGTTTTTCCACAATTaGCTTTGTCACCCGGTCATA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSMFFHN*LCHPVI
Trigger: TATGACCGGGTGACAAAGCCAATTGTGGAAAAACAT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGCTGAGAGCCGAAGATaGCTAAACAAAGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCAESRR*LNKVQE
Trigger: TTCCTGCACTTTGTTTAGCCATCTTCGGCTCTCAGC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGAAAAGAGGAGCCTATaGTTTGCTTCTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSEKRSL*FASVRN
Trigger: GTTTCTTACAGAAGCAAACCATAGGCTCCTCTTTTC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGTTTTGTTGTCAACGTaGGTATGCCTCTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKVLLST*VCLCVC
Trigger: ACACACACAGAGGCATACCCACGTTGACAACAAAAC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGCCAGTAAAATACAAATaGGAGGACCGACACCAGGTT +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVPVKYK*EDRHQV
Trigger: AACCTGGTGTCGGTCCTCCCATTTGTATTTTACTGG...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTGGTTACTAGACTTTTaGATTTCATGCACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGWLLDF*ISCTSK
Trigger: TTTACTGGTGCATGAAATCCAAAAGTCTAGTAACCA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp AGGCTGGAGTTCCACAAAGTTTTGAAGAGCAAAGTTGGAATGAGCATGAATTTCCTGAAAGAGGATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: RLEFHKVLKSKVGMSMNFLKEDF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATCCTCTTTCAG...GAAATTCATGCTCATTCCAACTTTGCTCTTCAAAACTTTGTGGAACTCCAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635893.1
CDS-3UTR TCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAATTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR TCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCCAATTTCTGCTGTATaGTTGGACATACAACTGTCT +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCPISAV*LDIQLS
Trigger: AGACAGTTGTATGTCCAATCATACAGCAGAAATTGG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAATGGCGTAGAGAGATaGGTTTCAGTACACACTCTC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCNGVER*VSVHTL
Trigger: GAGAGTGTGTACTGAAACTCATCTCTCTACGCCATT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGACAAATGTGGCAGTTaGAATGCAAACAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESDKCGS*NANSGY
Trigger: GTATCCACTGTTTGCATTTCAACTGCCACATTTGTC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATACTATCATTTATTTTaGTGCTCAACTTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSYYHLF*CSTCPR
Trigger: TCTGGGGCAAGTTGAGCATCAAAATAAATGATAGTA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATACTATCATTTATTTTaGTGCTCAACTTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLYYHLF*CSTCPR
Trigger: TCTGGGGCAAGTTGAGCATCAAAATAAATGATAGTA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAATCACAGTGAACAATTaGATTGCTCCGTGGACATCA +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKITVNN*IAPWTS
Trigger: TGATGTCCACGGAGCAATTCAATTGTTCACTGTGAT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGAGATGATAACAATGTaGCTTCAGTTGCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSEMITM*LQLQLF
Trigger: GAACAATTGCAACTGAAGGCACATTGTTATCATCTC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGGAAAATTATCCATCTaGAGTGAGGAACAGCATCAC +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESGKLSI*SEEQHH
Trigger: GTGATGCTGTTCCTCACTGCAGATGGATAATTTTCC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303395.9
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAAGCCTTATTCATAATTaGCCAAACCTGATTAAAAGG +
Preference number: 4 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVSLIHN*PNLIKR
Trigger: CCTTTTAATCAGGTTTGGGCAATTATGAATAAGGCT...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636194.1
ENST00000671940.1
CDS-3UTR GCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCCTTTGCCTTTTCTTCTaGAATGCGTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCLCLFF*NASFNS
Trigger: GCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAG...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTCATCTTTGCCTTCTTaGTCATGTTTTTCCACAATT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPSSLPS*SCFSTI
Trigger: AATTGTGGAAAAACATGAGCAAGAAGGCAAAGATGA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTCATCTTTGCCTTCTTaGTCATGTTTTTCCACAATT +
Preference number: 4 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSSLPS*SCFSTI
Trigger: AATTGTGGAAAAACATGAGCAAGAAGGCAAAGATGA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAAGGTCATTATTTGTTTaGTCAAACGTGCACCACAGG +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKRSLFV*SNVHHR
Trigger: CCTGTGGTGCACGTTTGAGCAAACAAATAATGACCT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTATCCCTCTGGACATTaGCCTGCATCAGAGCTATTT +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCYPSGH*PASELF
Trigger: AAATAGCTCTGATGCAGGCCAATGTCCAGAGGGATA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTACACATATATCCCTCTaGACATTGGCCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCTHISL*TLACIR
Trigger: TCTGATGCAGGCCAATGTCCAGAGGGATATATGTGT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTTATACCAACAGGGTaGGCATTTCTGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCFIPTG*AFLPGF
Trigger: GAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: WISQNKINKAPPLITQLPFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTACTTGGTCTAGGGGCTaGATTTCGCAAAACAAGATC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCTWSRG*ISQNKI
Trigger: GATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGTTAATTTTACTATCTaGACCACCCGAGTAACCTTT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSVNFTI*TTRVTF
Trigger: AAAGGTTACTCGGGTGGTCCAGATAGTAAAATTAAC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGCAGTACCCAATTCATaGTGGTTTAGAAACACATTT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSAVPNS*WFRNTF
Trigger: AAATGTGTTTCTAAACCACCATGAATTGGGTACTGC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCCCTGAAGTGTTAATCTaGAGGAACAGTTCCATGAGT +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESPEVLI*RNSSMS
Trigger: ACTCATGGAACTGTTCCTCCAGATTAACACTTCAGG...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641575.1
ENST00000641603.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTTTCAGGCCTGGAATaGCTGAAATCGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCFSGLE*LKSSSM
Trigger: CATTGAAGACGATTTCAGTCATTCCAGGCCTGAAAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTATCCATCCATCCTTTaGATGTGGCAACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCYPSIL*MWQLEA
Trigger: TGCTTCAAGTTGCCACATTCAAAGGATGGATGGATA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCACCAGATTGATGCGTaGCAAAATGGTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCHQIDA*QNGSHI
Trigger: TATGTGACTACCATTTTGTCACGCATCAATCTGGTG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGTTGCTTTAGGATTGTaGTGTTATGAAGAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESVALGL*CYEEAK
Trigger: CTTTGCCTCTTCATAACATCACAATCCTAAAGCAAC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTGTGTCTTACTGACATaGCCTCATCATTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESCVLLT*PHHSLK
Trigger: CTTCAAAGAATGATGAGGTCATGTCAGTAAGACACA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGTTCCTGTGTCTTACTaGCATGACCTCATCATTCTT +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCVPVSY*HDLIIL
Trigger: AAGAATGATGAGGTCATGTCAGTAAGACACAGGAAC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGATTCCAGTGCACACATaGAGAATATGCAATTACCAG +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVIPVHT*RICNYQ
Trigger: CTGGTAATTGCATATTCTTCATGTGTGCACTGGAAT...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR GCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACTTTGCCTTTTCTTCTaGAATGCGTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTLCLFF*NASFNS
Trigger: GCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 4 (lower is better)
Translates to: DLTTLESLYTAFSETSFWIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR GCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACATGTGACTTTTTCTCATaGATGATCTCTAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTCDFFS*MISKCS
Trigger: GCTGCACTTAGAGATCATGCATGAGAAAAAGTCACA...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGAGGAGCCTATGGTTTaGTTCTGTAAGAAACACAAA +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKEEPMV*FCKKHK
Trigger: TTTGTGTTTCTTACAGAAGCAAACCATAGGCTCCTC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCAAACATACAAACTTATaGAGTAGAGTTGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCKHTNL*SRVVCP
Trigger: GGGACAGACAACTCTACTGCATAAGTTTGTATGTTT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTATTGCTCGTTGCCTTTaGGAAGGATCTTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCIARCL*EGSSRK
Trigger: CTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAAT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGGAGTTCCACATTTCTaGAATCAACTGCTGCATACA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCGVPHF*NQLLHT
Trigger: TGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGATGTTTTTCCACAATTaGCTTTGTCACCCGGTCATA +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVMFFHN*LCHPVI
Trigger: TATGACCGGGTGACAAAGCCAATTGTGGAAAAACAT...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTACTGTCCCTTTTCTaGTTGAGGCTATATTCCCTC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLLSLF*LRLYSL
Trigger: GAGGGAATATAGCCTCAACCAGAAAAGGGACAGTAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ATACTTAGGCTGGAGTTCCACAAAGTTTTGAAGAGCAAAGTTGGAATGAGCATGTTTGAAGAGCAAAGTTaGAATGAGCATGAATTTCAG +
Preference number: 4 (lower is better)
Translates to: ILRLEFHKVLKSKVGMSMFEEQS*NEHEFQ
Trigger: CTGAAATTCATGCTCATTCCAACTTTGCTCTTCAAA...CATGCTCATTCCAACTTTGCTCTTCAAAACTTTGTGGAACTCCAGCCTAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635893.1
CDS-3UTR CCA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAAATGGTTTTCAGGCCTaGAATTACCGAAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSNGFQA*NYRNSF
Trigger: AAAACTATTTCGGTAATTCCAGGCCTGAAAACCATT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000640036.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAAGATTTTGCCAACTTaGAAACTCGCAGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCKILPT*KLAAIE
Trigger: TTCGATTGCTGCGAGTTTTCAAGTTGGCAAAATCTT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR TCA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAATTTAGGCAATCAGTATaGTTATTCACGTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKFRQSV*LFTSSM
Trigger: CATCGAAGACGTGAATAATCATACTGATTGCCTAAA...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCATTTTTCAAATTCCATaGACTGAGTTGCATCGGGAT +
Preference number: 4 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESIFQIP*TELHRD
Trigger: ATCCCGATGCAACTCAGTTCATGGAATTTGAAAAAT...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCAATGTGCCTTCAGTTaGAATTGTTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCQCAFS*NCSDSF
Trigger: GAAGGAATCTGAACAATTGCAACTGAAGGCACATTG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTCTTTGCCTTTTCTTCTaGAATGCGTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLCLFF*NASFNS
Trigger: GCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAG...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCATGTGGCAGTTGAAATaGAAACAGTGGATACAATTA +
Preference number: 4 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCMWQLK*KQWIQL
Trigger: TAATTGTATCCACTGTTTGCATTTCAACTGCCACAT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTCTCTACATGACACTTaGAGAGAACCTACTATATGC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSLHDT*REPTIC
Trigger: GCATATAGTAGGTTCTCTGCAAGTGTCATGTAGAGA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTCTCCTACAGCAATTaGTACAGTCACAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCFSYSN*YSHSKT
Trigger: AGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAGTGAAACAAGCTTCTaGTTCAAGAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSETSF*FKSFFR
Trigger: CCTGAAGAAACTCTTGAACCAGAAGCTTGTTTCACT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGGTTAATTTTACTATCTaGACCACCCGAGTAACCTTT +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVVNFTI*TTRVTF
Trigger: AAAGGTTACTCGGGTGGTCCAGATAGTAAAATTAAC...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTTAGCATCAAATACTaGGGTCTTAACCACTATGCC +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCFSIKY*GLNHYA
Trigger: GGCATAGTGGTTAAGACCCCAGTATTTGATGCTAAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR TCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAGTGTCTGGGCTTTGTaGTACAGATATACAAACATA +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSVWAL*YRYTNI
Trigger: TATGTTTGTATATCTGTATCACAAAGCCCAGACACT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAATCTTTCCCAATTTCTaGTGTATGATTGGACATACA +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTIFPNF*CMIGHT
Trigger: TGTATGTCCAATCATACAGCAGAAATTGGGAAAGAT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CCA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGTTTCTGCTGTATGATTaGACATACAACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVFLLYD*TYNCLS
Trigger: AGAAAGACAGTTGTATGTCCAATCATACAGCAGAAA...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTGAAATTTGTTTCCTaGTCGAGGTATAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLKFVS*SRYRLL
Trigger: CAAAAGCCTATACCTCGACCAGGAAACAAATTTCAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
3UTR CAA 72 bp ATTCCATCCAGAATTGTGTTTAGTTGTCATAGTTCTTaGACCTCATGGAATTCTTTAGCCTTTCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: IPSRIVFSCHSS*TSWNSLAFLCL
Trigger: AAGACAAAGAAAGGCTAAAGAATTCCATGAGGTCAAAGAACTATGACAACTAAACACAATTCTGGATGGAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR GCA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTATATATATCTTCAAATaGCAGAGCACCACTACTAAG +
Preference number: 4 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCIYIFK*QSTTTK
Trigger: CTTAGTAGTGGTGCTCTGGCATTTGAAGATATATAT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS GCA 90 bp GTGAACCCGAGAGGTGGGGCTTGCAGTGAGCCGAGATGGCACCACTaGACTCCAGTCTGGGCCACAGAGCGAGACTGCGTTTTCTTATTG +
Preference number: 5 (lower is better)
Translates to: VNPRGGACSEPRWHH*TPVWATERDCVFLL
Trigger: CAATAAGAAAACGCAGTCTCGCTCTGTGGCCCAGACTGGAGTGCAGTGGTGCCATCTCGGCTCACTGCAAGCCCCACCTCTCGGGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642141.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCARALPFSPNSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCCTGAGGCAGTTGCCGTaGCTGCCTGAGCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVLRQLP*LPELPP
Trigger: AGGAGGCAGCTCAGGCAGCAACGGCAACTGCCTCAG...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641575.1
CDS-3UTR CAA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 5 (lower is better)
Translates to: LHWALWNVLRQLPLLPAEDNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 5 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATAATGAGCTGCAGACATaGTTGCATTCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCARALPFSPNNELQT*LHSPLN
Trigger: ATTTAGGGGTGAATGCAACAATGTCTGCAGCTCATT...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMNVLRQ*PLLPEL
Trigger: CAGCTCAGGCAGCAACGGCAACTGCCTCAGAACATT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641575.1
CDS-3UTR CAA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: NELEFVWLWQIERRFKRSFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGCTGTCCCTTTTCTGGTaGAGGCTATATTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMLSLFW*RLYSLF
Trigger: GAAGAGGGAATATAGCCTCAACCAGAAAAGGGACAG...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATTCTGTGGAGCTGTGTTaGGAATTACTATTTATACCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCARALPFSPNSVELC*ELLFIP
Trigger: GGGTATAAATAGTAATTCCAAACACAGCTCCACAGA...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS GCA 90 bp GAACACACAGACACACAAACACACACAAACGCACACATACACACATaGACCAGAGACCTCTGCAGTATCCTCTCGGCTTCATCCTCGCCT +
Preference number: 5 (lower is better)
Translates to: EHTDTQTHTNAHIHT*TRDLCSILSASSSP
Trigger: AGGCGAGGATGAAGCCGAGAGGATACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGCGTTTGTGTGTGTTTGTGTGTCTGTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000635776.1
ENST00000636194.1
ENST00000636759.1
ENST00000637988.1
ENST00000642141.1
ENST00000671940.1
ENST00000673490.1
ENST00000674923.1
CDS GCA 90 bp CAAACACACACAAACGCACACATACACACATGCACCAGAGACCTCTaGAGTATCCTCTCGGCTTCATCCTCGCCTCACTCTATGGTACCT +
Preference number: 5 (lower is better)
Translates to: QTHTNAHIHTCTRDL*SILSASSSPHSMVP
Trigger: AGGTACCATAGAGTGAGGCGAGGATGAAGCCGAGAGGATACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGCGTTTGTGTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636194.1
CDS GCA 90 bp CATTTCAGTTTCAGTGGTTGTTCCTGGTCTGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTAC +
Preference number: 5 (lower is better)
Translates to: HFSFSGCSWSDSGCC*VSLRVVGAQTRNLY
Trigger: GTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCAGGAACAACCACTGAAACTGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671940.1
CDS-3UTR CAA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGTGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVANVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCARALPFSPNVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCTCCCCTTCTCCCCCAATCAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCARALPFSPNQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...ATTGGGGGAGAAGGGGAGCGCGCGCGCACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTGCACTGGGCTCTCTGGAATGTTCTGAGGCAGTTGCCGTTGCTGCCTGCTGAGACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LHWALWNVLRQLPLLPAETTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCCTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LTENTPAACNSGRSLPPTLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: LTENTPAACNSGRSLPPTMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: NELEFVWLWQIERRFKRSYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: LTENTPAACNSGRSLPPTSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 5 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMDNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: NELEFVWLWQIERRFKRSSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: APLETGPYSLTSHCASYLLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: APLETGPYSLTSHCASYLMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCACTGGTGCTTCTCATaGGCCAAACCAATTGGGAGC +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAHWCFS*AKPIGS
Trigger: GCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGTTTCAGTTTCAGTGGTaGTTCCCTCTGGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWFQFQW*FPLAEA
Trigger: AGCTTCTGCCAGAGGGAACAACCACTGAAACTGAAA...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635776.1
ENST00000636194.1
CDS-3UTR CAA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFALEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVATQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFATGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCCTGTCCCTTTTCTGGTaGAGGCTATATTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LTENTPAACNSGRSLPPTLSLFW*RLYSLF
Trigger: GAAGAGGGAATATAGCCTCAACCAGAAAAGGGACAG...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGTGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTTCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPSSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTCAAAGGTCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: RVVGAQTRNLYGSRYPQRSSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...CCTTTGAGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFASSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TCTCTCCGTGTCGTCGGGGCACAAACAAGGAATCTCTACGGCTCTCGTTATCCTACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: SLRVVGAQTRNLYGSRYPTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...AGGATAACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVADNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: LSGIFPCARKNSTISSTQFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CTACGGGCTGTTCTTCTACAGGTGCGCCGATGTCCACAGTGCTACCTTCTGATGGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 5 (lower is better)
Translates to: LRAVLLQVRRCPQCYLLMAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...CATCAGAAGGTAGCACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 5 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFATQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAATATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: PPRITSYPLTPVLPPNREYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCACTGGTGCTTCTCATaGGCCAAACCAATTGGGAGC +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGHWCFS*AKPIGS
Trigger: GCTCCCAATTGGTTTGGCCAATGAGAAGCACCAGTG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGGCAAAGTCAGTCCATaGTACAAGGATGGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAGKVSP*YKDGKS
Trigger: GCTTTTCCCATCCTTGTACAATGGACTGACTTTGCC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGACTTATGCAGTAGAGTaGTCTGTCCCAATGGTTACT +
Preference number: 5 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMTYAVE*SVPMVT
Trigger: AGTAACCATTGGGACAGACAACTCTACTGCATAAGT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCTATAATGATGTCCTCTaGCTTGTTGCTGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LTENTPAACNSGRSLPPTYNDVL*LVAEVR
Trigger: CCTCACCTCAGCAACAAGCAAGAGGACATCATTATA...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTCCACCCCATCCAAGTaGGAGCAAGATTATCCCTCA +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSTPSK*EQDYPS
Trigger: TGAGGGATAATCTTGCTCCAACTTGGATGGGGTGGA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637038.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LTENTPAACNSGRSLPPTIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAATTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSEFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAATTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: PPRITSYPLTPVLPPNREFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTTTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLDNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNDNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: NELEFVWLWQIERRFKRSTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTTTGGTTGTGGCAGATaGAGAGGCGGTTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFFGCGR*RGGSSA
Trigger: TGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTTTCCACAATTGGCTTaGTCACCCGGTCATAGGAAG +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFFPQLA*SPGHRK
Trigger: CTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTTCCACAATTGGCTTaGTCACCCGGTCATAGGAAG +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLFPQLA*SPGHRK
Trigger: CTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTTTCCACAATTGGCTTaGTCACCCGGTCATAGGAAG +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYFPQLA*SPGHRK
Trigger: CTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 5 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAAACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: LSGIFPCARKNSTISSTQTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATAATGAGCTGCAGACATaGTTGCATTCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNNELQT*LHSPLN
Trigger: ATTTAGGGGTGAATGCAACAATGTCTGCAGCTCATT...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTTTCAGTTTCAGTGGTaGTTCCCTCTGGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLFQFQW*FPLAEA
Trigger: AGCTTCTGCCAGAGGGAACAACCACTGAAACTGAAA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTTTCAGTTTCAGTGGTaGTTCCCTCTGGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAFQFQW*FPLAEA
Trigger: AGCTTCTGCCAGAGGGAACAACCACTGAAACTGAAA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTCATCACAGTGAACAATaGAATTGCTCCGTGGACATC +
Preference number: 5 (lower is better)
Translates to: APLETGPYSLTSHCASYLHHSEQ*NCSVDI
Trigger: GATGTCCACGGAGCAATTCAATTGTTCACTGTGATG...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS TCA 90 bp GCTGTGGGGGAATATGAGCATGTAACGACACAGAAAGGCCCAAAGTaGGCTAGCTCAGGAATAAATATGGTCCACCTTTCAAATGTACTG +
Preference number: 5 (lower is better)
Translates to: AVGEYEHVTTQKGPK*ASSGINMVHLSNVL
Trigger: CAGTACATTTGAAAGGTGGACCATATTTATTCCTGAGCTAGCTCACTTTGGGCCTTTCTGTGTCGTTACATGCTCATATTCCCCCACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS GCA 90 bp GTTCAGATTCCTTCTTGCAAAAGGTGTCAAAGTATTTACAAGGGCTaGAGTCTCACTGGGGCAGAACACACAGACACACAAACACACACA +
Preference number: 5 (lower is better)
Translates to: VQIPSCKRCQSIYKG*SLTGAEHTDTQTHT
Trigger: TGTGTGTGTTTGTGTGTCTGTGTGTTCTGCCCCAGTGAGACTGCAGCCCTTGTAAATACTTTGACACCTTTTGCAAGAAGGAATCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000635776.1
ENST00000636194.1
ENST00000636759.1
ENST00000637988.1
ENST00000641996.1
ENST00000642141.1
ENST00000671940.1
ENST00000673490.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAATCAGTGGTTGTTCCATaGTCATCAGTAGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSESVVVP*SSVAGL
Trigger: TAAGCCAGCTACTGATGACAATGGAACAACCACTGA...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAATCAGTGGTTGTTCCATaGTCATCAGTAGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: PPRITSYPLTPVLPPNRESVVVP*SSVAGL
Trigger: TAAGCCAGCTACTGATGACAATGGAACAACCACTGA...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGDNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCTGCAGTGGCAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: FPQLALSPGHRKVDKLQWQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...CCACTGCAGCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATTCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 5 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 5 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTTCCACAATTGGCTTaGTCACCCGGTCATAGGAAG +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGFPQLA*SPGHRK
Trigger: CTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTCAGTGGGATATTTCCATGTGCCAGGAAGAATAGTACTATCAGCAGTACCCAATTTCCACAATTGGCTTaGTCACCCGGTCATAGGAAG +
Preference number: 5 (lower is better)
Translates to: LSGIFPCARKNSTISSTQFPQLA*SPGHRK
Trigger: CTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA...TTGGGTACTGCTGATAGTACTATTCTTCCTGGCACATGGAAATATCCCACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 5 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCACCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 5 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAATGCAAACCACGACTTaGTGTAGCTGGGAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSMQTTT*CSWEGH
Trigger: ATGGCCCTCCCAGCTACACAAAGTCGTGGTTTGCAT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: SETRPSQVPPLFSSAFFHYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...GTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTGTTGAATCACCTTGTGTCAGCCAGGCAGGAGACAGATGGCATGCTGAAATGTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: AVESPCVSQAGDRWHAEMCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...CATTTCAGCATGCCATCTGTCTCCTGCCTGGCTGACACAAGGTGATTCAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCTGTCCCTTTTCTGGTaGAGGCTATATTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGLSLFW*RLYSLF
Trigger: GAAGAGGGAATATAGCCTCAACCAGAAAAGGGACAG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGCTGTCCCTTTTCTGGTaGAGGCTATATTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGLSLFW*RLYSLF
Trigger: GAAGAGGGAATATAGCCTCAACCAGAAAAGGGACAG...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGGCAAAGTCAGTCCATaGTACAAGGATGGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGGKVSP*YKDGKS
Trigger: GCTTTTCCCATCCTTGTACAATGGACTGACTTTGCC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTACTTATGCAGTAGAGTaGTCTGTCCCAATGGTTACT +
Preference number: 5 (lower is better)
Translates to: APLETGPYSLTSHCASYLTYAVE*SVPMVT
Trigger: AGTAACCATTGGGACAGACAACTCTACTGCATAAGT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTACTTATGCAGTAGAGTaGTCTGTCCCAATGGTTACT +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVATYAVE*SVPMVT
Trigger: AGTAACCATTGGGACAGACAACTCTACTGCATAAGT...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTTTCAGTTTCAGTGGTaGTTCCCTCTGGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGFQFQW*FPLAEA
Trigger: AGCTTCTGCCAGAGGGAACAACCACTGAAACTGAAA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTTTCAGTTTCAGTGGTaGTTCCCTCTGGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGFQFQW*FPLAEA
Trigger: AGCTTCTGCCAGAGGGAACAACCACTGAAACTGAAA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CAA 90 bp AATGAGCTGGAGTTTGTTTGGTTGTGGCAGATTGAGAGGCGGTTCAAGCGCAGCTTCCATCTGAAAGTATaGGTAGCTTTTGATGCTACT +
Preference number: 5 (lower is better)
Translates to: NELEFVWLWQIERRFKRSFHLKV*VAFDAT
Trigger: AGTAGCATCAAAAGCTACCAATACTTTCAGATGGAA...GCTGCGCTTGAACCGCCTCTCAATCTGCCACAACCAAACAAACTCCAGCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTATAATGATGTCCTCTaGCTTGTTGCTGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYYNDVL*LVAEVR
Trigger: CCTCACCTCAGCAACAAGCAAGAGGACATCATTATA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCATCACAGTGAACAATaGAATTGCTCCGTGGACATC +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNHHSEQ*NCSVDI
Trigger: GATGTCCACGGAGCAATTCAATTGTTCACTGTGATG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGTGTTCAGATTCCTTCTaGCAAAAGGTGTCAAAGTAT +
Preference number: 5 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMCSDSF*QKVSKY
Trigger: ATACTTTGACACCTTTTGCAAGAAGGAATCTGAACA...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTATGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATCCTCCAAGGAAGCATaGGTGGGAGGCCATTGTATA +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSSSKEA*VGGHCI
Trigger: TATACAATGGCCTCCCACCAATGCTTCCTTGGAGGA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AGCCACGGATGCTCAACAAAGACTGGTGTGGGGAGGAGTACCTCTTTTCATATGGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: SHGCSTKTGVGRSTSFHMVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...CATATGAAAAGAGGTACTCCTCCCCACACCAGTCTTTGTTGAGCATCCGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFDNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVASFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTATTCGGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: LFGNTSFSGSTIVFLCLLFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...AAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PPRITSYPLTPVLPPNREVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CGGGGAGGAATGAGTCCAGTGCCAACCCAGCAAAGAAGGAATTGGAGAAGAAATGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: RGGMSPVPTQQRRNWRRNAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...ATTTCTTCTCCAATTCCTTCTTTGCTGGGTTGGCACTGGACTCATTCCTCCCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: APLETGPYSLTSHCASYLTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATTTCCACAATTGGCTTaGTCACCCGGTCATAGGAAG +
Preference number: 5 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPFPQLA*SPGHRK
Trigger: CTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTTTCCACAATTGGCTTaGTCACCCGGTCATAGGAAG +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPFPQLA*SPGHRK
Trigger: CTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGCATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: APLETGPYSLTSHCASYLYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGAAACACGTCCTTCTCAGGTTCCACCATTGTTTTCCTCTGCCTTCTTCCACATTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: GNTSFSGSTIVFLCLLPHYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...ATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGGCAAAGTCAGTCCATaGTACAAGGATGGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFGKVSP*YKDGKS
Trigger: GCTTTTCCCATCCTTGTACAATGGACTGACTTTGCC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GACAGAGTATGTATAGCTTGGCTCCATAGGGGTGGTGTTCTCGGTTCCTATGTCTTACTATCATTTATTTaGATGCTCAACTTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: DRVCIAWLHRGGVLGSYVLLSFI*MLNLPQ
Trigger: CTGGGGCAAGTTGAGCATCAAAATAAATGATAGTAA...GACATAGGAACCGAGAACACCACCCCTATGGAGCCAAGCTATACATACTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp GCTTCTGGTTCAAGAGTTTCTTCAGGTTCCACTACGGGCTGTTCTTCTACAGGTTCTGTGGAGCTGTGTTaGGAATTACTATTTATACCC +
Preference number: 5 (lower is better)
Translates to: ASGSRVSSGSTTGCSSTGSVELC*ELLFIP
Trigger: GGGTATAAATAGTAATTCCAAACACAGCTCCACAGA...ACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAACTTATGCAGTAGAGTaGTCTGTCCCAATGGTTACT +
Preference number: 5 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRTYAVE*SVPMVT
Trigger: AGTAACCATTGGGACAGACAACTCTACTGCATAAGT...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAACAGAGAACACACCTGCTGCTTGTAATTCTGGGAGGTCATTACCCCCTACCAATTACCAGACATATTaGCTGTCTTTAGTGCGACAA +
Preference number: 5 (lower is better)
Translates to: LTENTPAACNSGRSLPPTNYQTY*LSLVRQ
Trigger: TTGTCGCACTAAAGACAGCAAATATGTCTGGTAATT...GGTAGGGGGTAATGACCTCCCAGAATTACAAGCAGCAGGTGTGTTCTCTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGGCCACCTTATTTCCCTaGTGCATCATTATGATAAAC +
Preference number: 5 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKATLFP*CIIMIN
Trigger: GTTTATCATAATGATGCACAAGGGAAATAAGGTGGC...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS TCA 90 bp AGTCTCACCTCTGCCTGCATTCCCTCTATCATCTTTGAAGGAGTATaGGTCCAGAAAACAGATAGAGCTTTACCACAAAGCGCATTTGAA +
Preference number: 5 (lower is better)
Translates to: SLTSACIPSIIFEGV*VQKTDRALPQSAFE
Trigger: TTCAAATGCGCTTTGTGGTAAAGCTCTATCTGTTTTCTGGACTCATACTCCTTCAAAGATGATAGAGGGAATGCAGGCAGAGGTGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS GCA 90 bp CACAAAATCCTGCACACGGATGTATACAGCAGCCTTATTCATAATTaGCCAAACCTCAAACAGGTAGGAGTCAGGAAATCCATGATAGCA +
Preference number: 5 (lower is better)
Translates to: HKILHTDVYSSLIHN*PNLKQVGVRKSMIA
Trigger: TGCTATCATGGATTTCCTGACTCCTACCTGTTTGAGGTTTGGGCAATTATGAATAAGGCTGCTGTATACATCCGTGTGCAGGATTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637968.1
ENST00000637988.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFASSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTAATGTTCTGAGGCAGTaGCCGTTGCTGCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCNVLRQ*PLLPAE
Trigger: CTCAGCAGGCAGCAACGGCAACTGCCTCAGAACATT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTCAGTGGTTGTTCCATaGTCATCAGTAGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPSVVVP*SSVAGL
Trigger: TAAGCCAGCTACTGATGACAATGGAACAACCACTGA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFATVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGATAATCCTTCCACATaGGCGAGTCCAAGTTCTACC +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSDNPST*ASPSST
Trigger: GGTAGAACTTGGACTCGCCAATGTGGAAGGATTATC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTCAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVAQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTTCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFATTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFATMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACTGGAGTTTGTTTGGTaGTGGCAGATTGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTLEFVW*WQIERR
Trigger: CCGCCTCTCAATCTGCCACAACCAAACAAACTCCAG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: DLTTLESLYTAFSETSFWAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp GCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCTTGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 5 (lower is better)
Translates to: APLETGPYSLTSHCASYLAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...AAGATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGGACAAGCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 5 (lower is better)
Translates to: AHVFPQLALSPGHRKVDKPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...CTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TGCATGATCTCTAAGTGCAGCATGCCCTCATGCAAACCACGACTTTGTGTAGCTTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: CMISKCSMPSCKPRLCVACTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...AGCTACACAAAGTCGTGGTTTGCATGAGGGCATGCTGCACTTAGAGATCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAGGCAAAGTCAGTCCATaGTACAAGGATGGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSGKVSP*YKDGKS
Trigger: GCTTTTCCCATCCTTGTACAATGGACTGACTTTGCC...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGAATGAGCTGCAGACATaGTTGCATTCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGNELQT*LHSPLN
Trigger: ATTTAGGGGTGAATGCAACAATGTCTGCAGCTCATT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAATCTGTGGAGCTGTGTTaGGAATTACTATTTATACCC +
Preference number: 5 (lower is better)
Translates to: PPRITSYPLTPVLPPNRESVELC*ELLFIP
Trigger: GGGTATAAATAGTAATTCCAAACACAGCTCCACAGA...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATTTCAGTTTCAGTGGTaGTTCCCTCTGGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSFQFQW*FPLAEA
Trigger: AGCTTCTGCCAGAGGGAACAACCACTGAAACTGAAA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
CDS-3UTR CAA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATTTCAGTTTCAGTGGTaGTTCCCTCTGGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLFQFQW*FPLAEA
Trigger: AGCTTCTGCCAGAGGGAACAACCACTGAAACTGAAA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641575.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATTGTTCAGATTCCTTCTaGCAAAAGGTGTCAAAGTAT +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYCSDSF*QKVSKY
Trigger: ATACTTTGACACCTTTTGCAAGAAGGAATCTGAACA...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTCAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGTCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCAGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFAAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGAGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GAGAACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 5 (lower is better)
Translates to: ENSNLLSRSSPLYTESQFAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...AAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CCTCCTAGAATCACTAGCTATCCTCTGACACCAGTTCTTCCTCCTAACAGAGAAGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 5 (lower is better)
Translates to: PPRITSYPLTPVLPPNREAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...TTCTCTGTTAGGAGGAAGAACTGGTGTCAGAGGATAGCTAGTGATTCTAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACATGTTTTTCCACAATaGGCTTTGTCACCCGGTCAT +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSHVFPQ*ALSPGH
Trigger: ATGACCGGGTGACAAAGCCAATTGTGGAAAAACATG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTGCACCCCTTGAAACTGGTCCCTACAGTCTGACTAGCCATTGTGCATCTTATCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 5 (lower is better)
Translates to: FAPLETGPYSLTSHCASYPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...ATAAGATGCACAATGGCTAGTCAGACTGTAGGGACCAGTTTCAAGGGGTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGACCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 5 (lower is better)
Translates to: GLPTNNLLGLGAGFRKTRPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...TCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 5 (lower is better)
Translates to: GAGFRKTRSTKHLHLSPNPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...ATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTACAGGTTTGCACCCCTaGAAACTGGTCCCTACAGTC +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCTGLHP*KLVPTV
Trigger: GACTGTAGGGACCAGTTTCAAGGGGTGCAAACCTGT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCCCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACCCAAAATCACAGGTTaGCACCCCTTGAAACTGGTC +
Preference number: 5 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTPKITG*HPLKLV
Trigger: GACCAGTTTCAAGGGGTGCAAACCTGTGATTTTGGG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTATACAGTGTCAACCTaGCTGAGAGCCGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESYTVST*LRAEDG
Trigger: GCCATCTTCGGCTCTCAGCAAGGTTGACACTGTATA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACTTGGTCTAGGGGCTGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: TWSRGWISQNKINKAPPLCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...AAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCAGCCCCTAGACCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTTCTTGCTCATGTTTTTCCACAATTGGCTTTGTCACCCGGTCATAGGAAGGTGTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: LLAHVFPQLALSPGHRKVCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...CACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp AACAGTAACCTCCTGTCAAGGTCATCTCCCCTTTACACAGAGTCACAGTTTGCTTTACTATCATTTATTTaGATGCTCAACTTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: NSNLLSRSSPLYTESQFALLSFI*MLNLPQ
Trigger: CTGGGGCAAGTTGAGCATCAAAATAAATGATAGTAA...AGCAAACTGTGACTCTGTGTAAAGGGGAGATGACCTTGACAGGAGGTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGGAGGAGTACCTCTTTTCATATGTCAATCGGTTCCCTTCAATGGAGAAGCGAAAATTACCAGACATATTaGCTGTCTTTAGTGCGACAA +
Preference number: 5 (lower is better)
Translates to: GRSTSFHMSIGSLQWRSENYQTY*LSLVRQ
Trigger: TTGTCGCACTAAAGACAGCAAATATGTCTGGTAATT...TTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641996.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCACAGGTGCCTCGTTTaGGATAGTAAAATATTGACC +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPHRCLV*DSKILT
Trigger: GGTCAATATTTTACTATCCAAAACGAGGCACCTGTG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACATCACAGTGAACAATaGAATTGCTCCGTGGACATC +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSHHSEQ*NCSVDI
Trigger: GATGTCCACGGAGCAATTCAATTGTTCACTGTGATG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS TCA 90 bp TGCACACGGATGTATACAGCAGCCTTATTCATAATTGCCCAAACCTaGTTAAAAGGAAAATTATCCATCTGCAGTGAGGAACAGCATCAC +
Preference number: 5 (lower is better)
Translates to: CTRMYTAALFIIAQT*LKGKLSICSEEQHH
Trigger: GTGATGCTGTTCCTCACTGCAGATGGATAATTTTCCTTTTAATCAGGTTTGGGCAATTATGAATAAGGCTGCTGTATACATCCGTGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000636194.1
ENST00000642141.1
ENST00000671940.1
CDS TCA 90 bp TTAGCCCTCTTTTTCTCTGATTCATTGAGGGATTCTGTCCCTGAATaGCATTGTGAGATCATCGTAAATCTGAACAGACTTGTGCAATGC +
Preference number: 5 (lower is better)
Translates to: LALFFSDSLRDSVPE*HCEIIVNLNRLVQC
Trigger: GCATTGCACAAGTCTGTTCAGATTTACGATGATCTCACAATGTCATTCAGGGACAGAATCCCTCAATGAATCAGAGAAAAAGAGGGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPSSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGTTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCTCAGTGGTTGTTCCATaGTCATCAGTAGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCSVVVP*SSVAGL
Trigger: TAAGCCAGCTACTGATGACAATGGAACAACCACTGA...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTTCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: DLTTLESLYTAFSETSFWFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TTTATAAAGAGTAATTTTGGTCAATTCAGTCTTCTGGCGGTGGAGGGTGAGGGGGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: FIKSNFGQFSLLAVEGEGAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...CCCCTCACCCTCCACCGCCAGAAGACTGAATTGACCAAAATTACTCTTTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ATTCACGTCTTCGATGTCAAACCTGTCACCAGTTGTGGTGTTAATACAGTGGTAACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: IHVFDVKPVTSCGVNTVVTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...TACCACTGTATTAACACCACAACTGGTGACAGGTTTGACATCGAAGACGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTTTCCACAATTGGCTTaGTCACCCGGTCATAGGAAG +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESFPQLA*SPGHRK
Trigger: CTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTACACAGAGTCACAGTTaGCTGACAAGGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCTQSHS*LTRGHC
Trigger: ACAGTGACCCCTTGTCAGCAAACTGTGACTCTGTGT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGACTTTCATGAGCTGTaGAATCACCTTGTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESDFHEL*NHLVSA
Trigger: GGCTGACACAAGGTGATTCAACAGCTCATGAAAGTC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGGACTTTCATGAGCTGTaGAATCACCTTGTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVDFHEL*NHLVSA
Trigger: GGCTGACACAAGGTGATTCAACAGCTCATGAAAGTC...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGACTTTCATGAGCTGTaGAATCACCTTGTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKDFHEL*NHLVSA
Trigger: GGCTGACACAAGGTGATTCAACAGCTCATGAAAGTC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTCTGTGGAGCTGTGTTaGGAATTACTATTTATACCC +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPSVELC*ELLFIP
Trigger: GGGTATAAATAGTAATTCCAAACACAGCTCCACAGA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTGCACCTGCTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGTATGTGTTCCAGGCTTaGAAGTATAGTACTGATGAT +
Preference number: 5 (lower is better)
Translates to: LHLLRFTGLPTNNLLGLGYVFQA*KYSTDD
Trigger: ATCATCAGTACTATACTTCAAAGCCTGGAACACATA...CCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAGCAGGTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635776.1
CDS TCA 90 bp CATAATTGCCCAAACCTGATTAAAAGGAAAATTATCCATCTGCAGTaGGGAACAGCATCACCCAAAGACGAGATGATAACAATGTGCCTT +
Preference number: 5 (lower is better)
Translates to: HNCPNLIKRKIIHLQ*GTASPKDEMITMCL
Trigger: AAGGCACATTGTTATCATCTCGTCTTTGGGTGATGCTGTTCCTCACTGCAGATGGATAATTTTCCTTTTAATCAGGTTTGGGCAATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000636194.1
ENST00000642141.1
ENST00000671940.1
CDS GCA 90 bp ACATGTAAGGGTATAAAAAGGGCTCTGACTCAATGTTTTCCAAGGTaGTTACTTATATTTAGACAGAGCCAGGGAGAAAGCCTTTATCTC +
Preference number: 5 (lower is better)
Translates to: TCKGIKRALTQCFPR*LLIFRQSQGESLYL
Trigger: GAGATAAAGGCTTTCTCCCTGGCTCTGTCTAAATATAAGTAAGCACCTTGGAAAACATTGAGTCAGAGCCCTTTTTATACCCTTACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTGTTCAGATTCCTTCTaGCAAAAGGTGTCAAAGTAT +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPCSDSF*QKVSKY
Trigger: ATACTTTGACACCTTTTGCAAGAAGGAATCTGAACA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTGGTACAAGCACTGTTaGCTCCATCTTGTCATCCTG +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCWYKHC*LHLVIL
Trigger: CAGGATGACAAGATGGAGCAAACAGTGCTTGTACCA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTCTGCTATTTCGCCTaGGTGAAAATAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCFCYFA*VKIGSH
Trigger: GTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTCAGTGGTTGTTCCATaGTCATCAGTAGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESSVVVP*SSVAGL
Trigger: TAAGCCAGCTACTGATGACAATGGAACAACCACTGA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCCAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTAACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCAACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTCTCAGGTTCCACCATaGTTTTCCTCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSQVPP*FSSAFF
Trigger: GAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGCAATGAGCTGGAGTTaGTTTGGTTGTGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCAMSWS*FGCGRL
Trigger: CAATCTGCCACAACCAAACAAACTCCAGCTCATTGC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CTAAGATTTACTGGCCTACCCACAAATAATCTACTTGGTCTAGGGGCTGGATTTCCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 5 (lower is better)
Translates to: LRFTGLPTNNLLGLGAGFPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...AAATCCAGCCCCTAGACCAAGTAGATTATTTGTGGGTAGGCCAGTAAATCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCACCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 5 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AATTACTATTTATACCCACAGTGTCTGGTCCCCAGCTTAAACAGCAAAGTGCCATGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: NYYLYPQCLVPSLNSKVPCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...TGGCACTTTGCTGTTTAAGCTGGGGACCAGACACTGTGGGTATAAATAGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGATTTCGCAAAACAAGATCAACAAAGCACCTCCACTTATCACCCAATTACCCTTACTATCATTTATTTaGATGCTCAACTTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: WISQNKINKAPPLITQLPLLSFI*MLNLPQ
Trigger: CTGGGGCAAGTTGAGCATCAAAATAAATGATAGTAA...GGGTAATTGGGTGATAAGTGGAGGTGCTTTGTTGATCTTGTTTTGCGAAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TTCATACTTAGGCTGGAGTTCCACAAAGTTTTGAAGAGCAAAGTTGGAATGAGCGAGTTCCACAAAGTTTaGAAGAGCAAAGTTGGAATG +
Preference number: 5 (lower is better)
Translates to: FILRLEFHKVLKSKVGMSEFHKV*KSKVGM
Trigger: CATTCCAACTTTGCTCTTCAAAACTTTGTGGAACTC...GCTCATTCCAACTTTGCTCTTCAAAACTTTGTGGAACTCCAGCCTAAGTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635893.1
CDS TCA 90 bp CTGCATATGAAATTCCTGATTAAAAGGAAAATTATCCATCTGCAGTaGGGAACAGCATCACCCAAAGACGAGATGATAACAATGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LHMKFLIKRKIIHLQ*GTASPKDEMITMCL
Trigger: AAGGCACATTGTTATCATCTCGTCTTTGGGTGATGCTGTTCCTCACTGCAGATGGATAATTTTCCTTTTAATCAGGAATTTCATATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635776.1
ENST00000641996.1
ENST00000673490.1
CDS-3UTR CAA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTATGTTCAGATTCCTTCTaGCAAAAGGTGTCAAAGTAT +
Preference number: 5 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLCSDSF*QKVSKY
Trigger: ATACTTTGACACCTTTTGCAAGAAGGAATCTGAACA...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303395.9
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAATTGGTGGGAGGCCATaGTATACATTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTIGGRP*YTFIPQ
Trigger: CTGAGGAATAAATGTATACAATGGCCTCCCACCAAT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GATTTGACAACACTTGAATCTTTGTACACAGCCTTCAGTGAAACAAGCTTCTGGGTTCTTCTACTGTATTaGTTAGAATGCTGGCTATAC +
Preference number: 5 (lower is better)
Translates to: DLTTLESLYTAFSETSFWVLLLY*LECWLY
Trigger: GTATAGCCAGCATTCTAACAAATACAGTAGAAGAAC...CCAGAAGCTTGTTTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGTCAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636194.1
ENST00000641996.1
ENST00000671940.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCACAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GGCTCTGGAGGAGCAAACACAGTATCCTACACACATGGCAATTCTAAATTTTTACAACTGTCTTTCTTGTaGTTTAGATCATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: GSGGANTVSYTHGNSKFLQLSFL*FRSSSG
Trigger: ACCACTTGATGATCTAAACAACAAGAAAGACAGTTG...TAAAAATTTAGAATTGCCATGTGTGTAGGATACTGTGTTTGCTCCTCCAGAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCTCATTCAGTTTCTCTTaGCTTTCTTCCAGATCCGAT +
Preference number: 5 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCSFSFS*LSSRSD
Trigger: ATCGGATCTGGAAGAAAGCAAAGAGAAACTGAATGA...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCTTTGAATGTGGCAACTaGAAGCAAAGAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESFECGN*KQREIP
Trigger: GGGTATCTCTCTTTGCTTCAAGTTGCCACATTCAAA...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CAAAGAAGGAATTGGAGAAGAAATATTCCTATGTCAATCTTCTCTCTCTGGTGCACAATGAACACCAGATaGATGCGTGACAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: QRRNWRRNIPMSIFSLWCTMNTR*MRDKMV
Trigger: TACCATTTTGTCACGCATCAATCTGGTGTTCATTGT...GCACCAGAGAGAGAAGATTGACATAGGAATATTTCTTCTCCAATTCCTTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGTTTTTCTTGTGACTTTTTCTCATGCATGATCTCTAAGTGCAGCATGCCCTCATTACTATCATTTATTTaGATGCTCAACTTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CFSCDFFSCMISKCSMPSLLSFI*MLNLPQ
Trigger: CTGGGGCAAGTTGAGCATCAAAATAAATGATAGTAA...TGAGGGCATGCTGCACTTAGAGATCATGCATGAGAAAAAGTCACAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp GATGCAATTTTCCCATCTATACTTGATTGTCTAGAGTATTTTCCTCCTCTAGTGAATGAGCTGCAGACATaGTTGCATTCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: DAIFPSILDCLEYFPPLVNELQT*LHSPLN
Trigger: ATTTAGGGGTGAATGCAACAATGTCTGCAGCTCATT...CACTAGAGGAGGAAAATACTCTAGACAATCAAGTATAGATGGGAAAATTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS-3UTR CAA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAAATGAGCTGCAGACATaGTTGCATTCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKNELQT*LHSPLN
Trigger: ATTTAGGGGTGAATGCAACAATGTCTGCAGCTCATT...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTATAATGATGTCCTCTaGCTTGTTGCTGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCYNDVL*LVAEVR
Trigger: CCTCACCTCAGCAACAAGCAAGAGGACATCATTATA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
CDS TCA 90 bp GAATGGATAAATAACCTGATTAAAAGGAAAATTATCCATCTGCAGTaGGGAACAGCATCACCCAAAGACGAGATGATAACAATGTGCCTT +
Preference number: 5 (lower is better)
Translates to: EWINNLIKRKIIHLQ*GTASPKDEMITMCL
Trigger: AAGGCACATTGTTATCATCTCGTCTTTGGGTGATGCTGTTCCTCACTGCAGATGGATAATTTTCCTTTTAATCAGGTTATTTATCCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636759.1
CDS-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACATCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTSSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp AAGAATTTCATGAAGGGGACATTTACAAAAGTGTCAGCAATGTTAGGAGAAAGCACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: KNFMKGTFTKVSAMLGESTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...GCTTTCTCCTAACATTGCTGACACTTTTGTAAATGTCCCCTTCATGAAATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGTCAAAGACCATTCCTaGAAATTTGTTTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCVKDHS*KFVSWS
Trigger: CGACCAGGAAACAAATTTCAAGGAATGGTCTTTGAC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAATATGACTCCAAACATTaGAATGAAGTTTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKYDSKH*NEVCTC
Trigger: GCAGGTGCAAACTTCATTCAAATGTTTGGAGTCATA...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTCGTCGTCATCTTTTTaGTCTGGTTTGGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCSSSSF*SGLGFF
Trigger: AAAGAATCCCAAACCAGACAAAAAAGATGACGACGA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTACTGTAAGCACATTATaGAAATGGTCCGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCTVSTL*KWSVIG
Trigger: TCCAATGACGGACCATTTCAATAATGTGCTTACAGT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTACAACACTTGAATCTTaGTACACAGCCTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCTTLES*YTAFSE
Trigger: TTCACTGAAGGCTGTGTACAAAGATTCAAGTGTTGT...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAAGCTTATGTCAAAAACTaGTCTGGTTACGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKAYVKN*SGYEVK
Trigger: TTTGACTTCGTAACCAGACAAGTTTTTGACATAAGC...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACACCTAAAGGAGTCCTGTaGATAAAAATACATCACCTT +
Preference number: 5 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTPKGVL*IKIHHL
Trigger: AAGGTGATGTATTTTTATCAACAGGACTCCTTTAGG...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp TGGCATGCTGAAATGAGGCATATAGAAGAATTTCATGAAGGGGACATTTACAAATGCACTCTACATTTCTaGTGGTACATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: WHAEMRHIEEFHEGDIYKCTLHF*WYIFDA
Trigger: TGCATCAAATATGTACCACAAGAAATGTAGAGTGCA...TTTGTAAATGTCCCCTTCATGAAATTCTTCTATATGCCTCATTTCAGCATGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp CGACAAGTTTATATAGTTCGAGTGTCTGGGCTTTGTGATACAGATATACAAACAAATTACCAGACATATTaGCTGTCTTTAGTGCGACAA +
Preference number: 5 (lower is better)
Translates to: RQVYIVRVSGLCDTDIQTNYQTY*LSLVRQ
Trigger: TTGTCGCACTAAAGACAGCAAATATGTCTGGTAATT...TGTTTGTATATCTGTATCACAAAGCCCAGACACTCGAACTATATAAACTTGTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTGTTCAGATTCCTTCTaGCAAAAGGTGTCAAAGTAT +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCCSDSF*QKVSKY
Trigger: ATACTTTGACACCTTTTGCAAGAAGGAATCTGAACA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303395.9
ENST00000635776.1
ENST00000636194.1
ENST00000637988.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTGCCCCACCTTTGATTTaGTTTTTATTGTACGTAAAG +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCAPPLI*FLLYVK
Trigger: CTTTACGTACAATAAAAACAAAATCAAAGGTGGGGC...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000303395.9
ENST00000375405.7
ENST00000635750.1
ENST00000635776.1
ENST00000636194.1
ENST00000637038.1
ENST00000637988.1
ENST00000640036.1
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000671940.1
ENST00000674923.1
CDS-3UTR CAA 90 bp ACAAATGTGGCAGTTGAAATGCAAACAGTGGATACAATTACTACACTAAAGTGTTTACTATCATTTATTTaGATGCTCAACTTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: TNVAVEMQTVDTITTLKCLLSFI*MLNLPQ
Trigger: CTGGGGCAAGTTGAGCATCAAAATAAATGATAGTAA...ACACTTTAGTGTAGTAATTGTATCCACTGTTTGCATTTCAACTGCCACATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000641575.1
ENST00000641603.1
ENST00000641996.1
ENST00000674923.1
CDS GCA 72 bp TTCAGTGGTTGTTCCTGGTCTGACTCAGGTTGCTGTTaGGTCTCTCTCCGTGTCGTCGGGGCACAAACAAGG +
Preference number: 6 (lower is better)
Translates to: FSGCSWSDSGCC*VSLRVVGAQTR
Trigger: CCTTGTTTGTGCCCCGACGACACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCAGGAACAACCACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671940.1
CDS GCA 72 bp TTCAGTTTCAGTGGTTGTTCCTGGTCTGACTCAGGTTaGTGTTGCGTCTCTCTCCGTGTCGTCGGGGCACAA +
Preference number: 6 (lower is better)
Translates to: FSFSGCSWSDSG*CCVSLRVVGAQ
Trigger: TTGTGCCCCGACGACACGGAGAGAGACGCAACAGCAACCTGAGTCAGACCAGGAACAACCACTGAAACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671940.1
CDS TCA 72 bp GATTTCTGGAGGCCAAGATCCCTGGAGAGTACCCGTTaGCCAGGAGTGCTAAATTCTGTACTGGGATTTCTG +
Preference number: 6 (lower is better)
Translates to: DFWRPRSLESTR*PGVLNSVLGFL
Trigger: CAGAAATCCCAGTACAGAATTTAGCACTCCTGGTCAACGGGTACTCTCCAGGGATCTTGGCCTCCAGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS GCA 72 bp GACACACAAACACACACAAACGCACACATACACACATaGACCAGAGACCTCTGCAGTATCCTCTCGGCTTCA +
Preference number: 6 (lower is better)
Translates to: DTQTHTNAHIHT*TRDLCSILSAS
Trigger: TGAAGCCGAGAGGATACTGCAGAGGTCTCTGGTGCATGTGTGTATGTGTGCGTTTGTGTGTGTTTGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000635776.1
ENST00000636194.1
ENST00000636759.1
ENST00000637988.1
ENST00000642141.1
ENST00000671940.1
ENST00000673490.1
ENST00000674923.1
CDS CCA 72 bp CTTCCTCCAGCTTCCATAACCCCTGAAGTGTTAATCTaGAGGAACAGTTCCATGAGTTTCCACAGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: LPPASITPEVLI*RNSSMSFHRPA
Trigger: TGCTGGCCTGTGGAAACTCATGGAACTGTTCCTCCAGATTAACACTTCAGGGGTTATGGAAGCTGGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635750.1
ENST00000641603.1
CDS TCA 72 bp CTTGTGCAATGCAAATGCCTTTGCTGTGGGGGAATATaGGCATGTAACGACACAGAAAGGCCCAAAGTGAGC +
Preference number: 6 (lower is better)
Translates to: LVQCKCLCCGGI*ACNDTERPKVS
Trigger: GCTCACTTTGGGCCTTTCTGTGTCGTTACATGCTCATATTCCCCCACAGCAAAGGCATTTGCATTGCACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS CAA 72 bp TATAGAAGAATAGAGACCTCACATCCTCAACAGAGTTaGAGAAGCACTGCTCCAAGTCTCACCTCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: YRRIETSHPQQS*RSTAPSLTSAC
Trigger: GCAGGCAGAGGTGAGACTTGGAGCAGTGCTTCTCAAACTCTGTTGAGGATGTGAGGTCTCTATTCTTCTATA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS CAA 90 bp GCACTGCTCCAAGTCTCACCTCTGCCTGCATTCCCTCTATCATCTTaGAAGGAGTATGAGTCCAGAAAACAGATAGAGCTTTACCACAAA +
Preference number: 6 (lower is better)
Translates to: ALLQVSPLPAFPLSS*KEYESRKQIELYHK
Trigger: TTTGTGGTAAAGCTCTATCTGTTTTCTGGACTCATACTCCTTCAAAGATGATAGAGGGAATGCAGGCAGAGGTGAGACTTGGAGCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS GCA 72 bp CTGCACACGGATGTATACAGCAGCCTTATTCATAATTaGCCAAACCTCAAACAGGTAGGAGTCAGGAAATCC +
Preference number: 6 (lower is better)
Translates to: LHTDVYSSLIHN*PNLKQVGVRKS
Trigger: GGATTTCCTGACTCCTACCTGTTTGAGGTTTGGGCAATTATGAATAAGGCTGCTGTATACATCCGTGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637968.1
ENST00000637988.1
ENST00000674923.1
CDS GCA 72 bp CTGCACACGGATGTATACAGCAGCCTTATTCATAATTaGCCAAACCTGGAAGCAACCAAGATGTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LHTDVYSSLIHN*PNLEATKMSFS
Trigger: ACTGAAGGACATCTTGGTTGCTTCCAGGTTTGGGCAATTATGAATAAGGCTGCTGTATACATCCGTGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636759.1
ENST00000641575.1
CDS CCA 72 bp AAGGTGTCAAAGTATTTACAAGGGCTGCAGTCTCACTaGGGCAGAACACACAGACACACAAACACACACAAA +
Preference number: 6 (lower is better)
Translates to: KVSKYLQGLQSH*GRTHRHTNTHK
Trigger: TTTGTGTGTGTTTGTGTGTCTGTGTGTTCTGCCCCAGTGAGACTGCAGCCCTTGTAAATACTTTGACACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000635776.1
ENST00000636194.1
ENST00000636759.1
ENST00000637988.1
ENST00000641996.1
ENST00000642141.1
ENST00000671940.1
ENST00000673490.1
ENST00000674923.1
CDS CAA 90 bp ACTTCATTTTATAGAAGAATAGAGACCTCACATCCTCAACAGAGTTaGAGAAGCACTGCTCCAAGTCTCACCTCTGCCTGCATTCCCTCT +
Preference number: 6 (lower is better)
Translates to: TSFYRRIETSHPQQS*RSTAPSLTSACIPS
Trigger: AGAGGGAATGCAGGCAGAGGTGAGACTTGGAGCAGTGCTTCTCAAACTCTGTTGAGGATGTGAGGTCTCTATTCTTCTATAAAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS TCA 72 bp AGTAAAAGCTCAGCTTCCTCCAGCTTCCATAACCCCTaGAGTGTTAATCTGGAGGAACAGTTCCATGAGTTT +
Preference number: 6 (lower is better)
Translates to: SKSSASSSFHNP*SVNLEEQFHEF
Trigger: AAACTCATGGAACTGTTCCTCCAGATTAACACTTCAGGGGTTATGGAAGCTGGAGGAAGCTGAGCTTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635750.1
ENST00000641575.1
ENST00000641603.1
CDS TCA 72 bp GAATATGAGCATGTAACGACACAGAAAGGCCCAAAGTaGGCTAGCTCAGGAATAAATATGGTCCACCTTTCA +
Preference number: 6 (lower is better)
Translates to: EYEHVTTQKGPK*ASSGINMVHLS
Trigger: TGAAAGGTGGACCATATTTATTCCTGAGCTAGCTCACTTTGGGCCTTTCTGTGTCGTTACATGCTCATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS TCA 72 bp CCTCCCACACCCCTACCTGCTAATGGAGTTGGTTTTTaGAAATTAAGCACTTTCTATCTGGTATGGGTAGAA +
Preference number: 6 (lower is better)
Translates to: PPTPLPANGVGF*KLSTFYLVWVE
Trigger: TTCTACCCATACCAGATAGAAAGTGCTTAATTTTCAAAAACCAACTCCATTAGCAGGTAGGGGTGTGGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS GCA 72 bp GGAACAGCATCACCCAAAGACGAGATGATAACAATGTaGCTTCAGTTGCAATTGTTCAGATTCCTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: GTASPKDEMITM*LQLQLFRFLLA
Trigger: TGCAAGAAGGAATCTGAACAATTGCAACTGAAGGCACATTGTTATCATCTCGTCTTTGGGTGATGCTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000635776.1
ENST00000636194.1
ENST00000636759.1
ENST00000637988.1
ENST00000641996.1
ENST00000642141.1
ENST00000671940.1
ENST00000673490.1
ENST00000674923.1
CDS CCA 72 bp AAACTGGCTGTGAAAGTATGGTCCCCCAACCAGTACTaGTTAAGTATAGATATGGAGAGTCCATGTTTAGAA +
Preference number: 6 (lower is better)
Translates to: KLAVKVWSPNQY*LSIDMESPCLE
Trigger: TTCTAAACATGGACTCTCCATATCTATACTTAACCAGTACTGGTTGGGGGACCATACTTTCACAGCCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS CAA 90 bp GAGTATGAGTCCAGAAAACAGATAGAGCTTTACCACAAAGCGCATTaGAAGGAAGGGAGAATTTCACCTGTGCTTACTAGAAGAACAATC +
Preference number: 6 (lower is better)
Translates to: EYESRKQIELYHKAH*KEGRISPVLTRRTI
Trigger: GATTGTTCTTCTAGTAAGCACAGGTGAAATTCTCCCTTCCTTCAAATGCGCTTTGTGGTAAAGCTCTATCTGTTTTCTGGACTCATACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS CAA 90 bp GGAACAGCATCACCCAAAGACGAGATGATAACAATGTGCCTTCAGTaGCAATTGTTCAGATTCCTTCTTGCAAAAGGTGTCAAAGTATTT +
Preference number: 6 (lower is better)
Translates to: GTASPKDEMITMCLQ*QLFRFLLAKGVKVF
Trigger: AAATACTTTGACACCTTTTGCAAGAAGGAATCTGAACAATTGCAACTGAAGGCACATTGTTATCATCTCGTCTTTGGGTGATGCTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000635776.1
ENST00000636194.1
ENST00000636759.1
ENST00000637988.1
ENST00000641996.1
ENST00000642141.1
ENST00000671940.1
ENST00000673490.1
ENST00000674923.1
CDS TCA 72 bp CCAAACCTGATTAAAAGGAAAATTATCCATCTGCAGTaGGGAACAGCATCACCCAAAGACGAGATGATAACA +
Preference number: 6 (lower is better)
Translates to: PNLIKRKIIHLQ*GTASPKDEMIT
Trigger: TGTTATCATCTCGTCTTTGGGTGATGCTGTTCCTCACTGCAGATGGATAATTTTCCTTTTAATCAGGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000636194.1
ENST00000642141.1
ENST00000671940.1
CDS TCA 72 bp GCTGTTCTGATTAAAAGGAAAATTATCCATCTGCAGTaGGGAACAGCATCACCCAAAGACGAGATGATAACA +
Preference number: 6 (lower is better)
Translates to: AVLIKRKIIHLQ*GTASPKDEMIT
Trigger: TGTTATCATCTCGTCTTTGGGTGATGCTGTTCCTCACTGCAGATGGATAATTTTCCTTTTAATCAGAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637988.1
ENST00000674923.1
CDS GCA 72 bp CTGCACACGGATGTATACAGCAGCCTTATTCATAATTaGCCAAACCTGATTAAAAGGAAAATTATCCATCTG +
Preference number: 6 (lower is better)
Translates to: LHTDVYSSLIHN*PNLIKRKIIHL
Trigger: CAGATGGATAATTTTCCTTTTAATCAGGTTTGGGCAATTATGAATAAGGCTGCTGTATACATCCGTGTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000636194.1
ENST00000642141.1
ENST00000671940.1
CDS GCA 72 bp CCAAAGGAGTTGAAAACTTATGTCCACACAAAATCCTaGACACGGATGTATACAGCAGCCTTATTCATAATT +
Preference number: 6 (lower is better)
Translates to: PKELKTYVHTKS*TRMYTAALFII
Trigger: AATTATGAATAAGGCTGCTGTATACATCCGTGTGCAGGATTTTGTGTGGACATAAGTTTTCAACTCCTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000303395.9
ENST00000507401.2
ENST00000636194.1
ENST00000636759.1
ENST00000637968.1
ENST00000637988.1
ENST00000641575.1
ENST00000642141.1
ENST00000671940.1
ENST00000674923.1
CDS TCA 72 bp AAATTCCTGATTAAAAGGAAAATTATCCATCTGCAGTaGGGAACAGCATCACCCAAAGACGAGATGATAACA +
Preference number: 6 (lower is better)
Translates to: KFLIKRKIIHLQ*GTASPKDEMIT
Trigger: TGTTATCATCTCGTCTTTGGGTGATGCTGTTCCTCACTGCAGATGGATAATTTTCCTTTTAATCAGGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635776.1
ENST00000641996.1
ENST00000673490.1
CDS TCA 72 bp AATAACCTGATTAAAAGGAAAATTATCCATCTGCAGTaGGGAACAGCATCACCCAAAGACGAGATGATAACA +
Preference number: 6 (lower is better)
Translates to: NNLIKRKIIHLQ*GTASPKDEMIT
Trigger: TGTTATCATCTCGTCTTTGGGTGATGCTGTTCCTCACTGCAGATGGATAATTTTCCTTTTAATCAGGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636759.1
CDS TCA 72 bp TTTTTCTCTGATTCATTGAGGGATTCTGTCCCTGAATaGCATTGTGAGATCATCGTAAATCTGAACAGACTT +
Preference number: 6 (lower is better)
Translates to: FFSDSLRDSVPE*HCEIIVNLNRL
Trigger: AAGTCTGTTCAGATTTACGATGATCTCACAATGTCATTCAGGGACAGAATCCCTCAATGAATCAGAGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673490.1
CDS CCA 72 bp TTCCAAAAATTAGACTTATTTGAGATCAATTGGCAGTaGGCAGACAAAACATTAAAGAAGCAACATGTAAGG +
Preference number: 6 (lower is better)
Translates to: FQKLDLFEINWQ*ADKTLKKQHVR
Trigger: CCTTACATGTTGCTTCTTTAATGTTTTGTCTGCCCACTGCCAATTGATCTCAAATAAGTCTAATTTTTGGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673490.1