RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCN11A (Homo sapiens)

Ensembl gene IDs: ENSG00000168356

Ensembl transcript IDs: ENST00000302328.9, ENST00000444237.2, ENST00000456224.7, ENST00000665106.1, ENST00000668754.1, ENST00000674755.1, ENST00000674979.1, ENST00000675223.1, ENST00000675269.1, ENST00000675672.1, ENST00000675892.1, ENST00000676045.1, ENST00000676176.1, ENST00000676333.1

Found 970 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCAATCATGCCTaGCGCCCAGGGTCTTTGGTACAGAGGTTAGTATACCAAGCTCCT +
Preference number: 1 (lower is better)
Translates to: HLPPPQVVPTKSNHA*RPGSLVQRLVYQAP
Trigger: AGGAGCTTGGTATACTAACCTCTGTACCAAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR GCA 90 bp ACGTCATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCAATCATaGCTGACGCCCAGGGTCTTTGGTACAGAGGTTAGTATACCAAGC +
Preference number: 1 (lower is better)
Translates to: TSSSSSASGANQVQS*LTPRVFGTEVSIPS
Trigger: GCTTGGTATACTAACCTCTGTACCAAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 90 bp GGGTCAGTCATCACAGTTCTCAGGACCTTCTTAACGCACAGCCACTaGGGGCAACAGTTCCACACGAGGTACTTGGATGCCAGGTTTTCT +
Preference number: 1 (lower is better)
Translates to: GSVITVLRTFLTHSH*GQQFHTRYLDARFS
Trigger: AGAAAACCTGGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAAGAAGGTCCTGAGAACTGTGATGACTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR GCA 90 bp TCCTTCATGGTGATGGTGAGGATGCTGACAGCACTCAGTGCTCTCTaGCTTTGGAGAGGATCTCCATGCTCATCAAAGTGGTCCAGTGAT +
Preference number: 1 (lower is better)
Translates to: SFMVMVRMLTALSAL*LWRGSPCSSKWSSD
Trigger: ATCACTGGACCACTTTGATGAGCATGGAGATCCTCTCCAAAGGCAGAGAGCACTGAGTGCTGTCAGCATCCTCACCATCACCATGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR GCA 90 bp ATCTTCACCAGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTGGTaGCAACCAAGTCCAATCATGCCTGACGCCCAGGGTCTTTGGTAC +
Preference number: 1 (lower is better)
Translates to: IFTRKFNVIFLLRKW*QPSPIMPDAQGLWY
Trigger: GTACCAAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCTGGTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR GCA 90 bp ATGCTGACAGCACTCAGTGCTCTCTGCCTTTGGAGAGGATCTCCATaGTCATCAAAGTGGTCCAGTGATAGATTCTGGGACAGTCGTTTG +
Preference number: 1 (lower is better)
Translates to: MLTALSALCLWRGSP*SSKWSSDRFWDSRL
Trigger: CAAACGACTGTCCCAGAATCTATCACTGGACCACTTTGATGAGCATGGAGATCCTCTCCAAAGGCAGAGAGCACTGAGTGCTGTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR GCA 90 bp GAGCTCATAGGCCTGTTGTTCAGGCTCAGGTTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAATTCAACGTCATCTTCCTCCTCCGC +
Preference number: 1 (lower is better)
Translates to: ELIGLLFRLRLCDAL*IIFTRKFNVIFLLR
Trigger: GCGGAGGAGGAAGATGACGTTGAATTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGGCCTATGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 90 bp CTCAGTGCTCTCTGCCTTTGGAGAGGATCTCCATGCTCATCAAAGTaGTCCAGTGATAGATTCTGGGACAGTCGTTTGGTTTGCTCTAGG +
Preference number: 1 (lower is better)
Translates to: LSALCLWRGSPCSSK*SSDRFWDSRLVCSR
Trigger: CCTAGAGCAAACCAAACGACTGTCCCAGAATCTATCACTGGACCACTTTGATGAGCATGGAGATCCTCTCCAAAGGCAGAGAGCACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 90 bp ATGGTGATGGTGAGGATGCTGACAGCACTCAGTGCTCTCTGCCTTTaGAGAGGATCTCCATGCTCATCAAAGTGGTCCAGTGATAGATTC +
Preference number: 1 (lower is better)
Translates to: MVMVRMLTALSALCL*RGSPCSSKWSSDRF
Trigger: GAATCTATCACTGGACCACTTTGATGAGCATGGAGATCCTCTCCAAAGGCAGAGAGCACTGAGTGCTGTCAGCATCCTCACCATCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 90 bp ATTATCTTCACCAGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTaGTGCCAACCAAGTCCAATCATGCCTGACGCCCAGGGTCTTTGG +
Preference number: 1 (lower is better)
Translates to: IIFTRKFNVIFLLRK*CQPSPIMPDAQGLW
Trigger: CCAAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCTGGTGAAGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 90 bp CTTCAGAGAACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTaGGCTTCTTGTTCTCCTGATGGAGCTCATAGGCCTGTTGTTCAG +
Preference number: 1 (lower is better)
Translates to: LQRTCQFPHFELSGS*ASCSPDGAHRPVVQ
Trigger: CTGAACAACAGGCCTATGAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGTTCTCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR TCA 90 bp TCTCCTGATGGAGCTCATAGGCCTGTTGTTCAGGCTCAGGTTGTGTaGTGCGCTGTGCATTATCTTCACCAGAAAATTCAACGTCATCTT +
Preference number: 1 (lower is better)
Translates to: SPDGAHRPVVQAQVV*CAVHYLHQKIQRHL
Trigger: AAGATGACGTTGAATTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGGCCTATGAGCTCCATCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 90 bp AGCAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTTaGGAACCATCTCAGGTAACCATCCAAAGCCATCCTGAAGATCAA +
Preference number: 1 (lower is better)
Translates to: SSNQSLWANISLVAF*EPSQVTIQSHPEDQ
Trigger: TTGATCTTCAGGATGGCTTTGGATGGTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR TCA 90 bp TGGTCACCCTTGGTCACCTTCATCATGTACTTTCGAAAGGCCTTTTaGATAATAGCAGCACCTCTTTCCTCTTCCTTTCTCTTGGTGGTG +
Preference number: 1 (lower is better)
Translates to: WSPLVTFIMYFRKAF*IIAAPLSSSFLLVV
Trigger: CACCACCAAGAGAAAGGAAGAGGAAAGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAAGTACATGATGAAGGTGACCAAGGGTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR TCA 90 bp AAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTaGTTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGC +
Preference number: 1 (lower is better)
Translates to: KRTILKSVGGKGMCS*FSKVEIIVLTMERS
Trigger: GCTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR GCA 90 bp GAAGTACACAGTTCATTACATCTGCAAAACTCAGAAGAGCAACAATaGTGTCAAAAATGTTCCAGCCTCGGCGAAAGTAGTGGTAGGGAT +
Preference number: 1 (lower is better)
Translates to: EVHSSLHLQNSEEQQ*CQKCSSLGESSGRD
Trigger: ATCCCTACCACTACTTTCGCCGAGGCTGGAACATTTTTGACAGCATTGTTGCTCTTCTGAGTTTTGCAGATGTAATGAACTGTGTACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR TCA 90 bp GGTTGCTTTTTGGGAACCATCTCAGGTAACCATCCAAAGCCATCCTaGAGATCAATGGTGCTACATTCTGATAGTATACTGGTAACATCA +
Preference number: 1 (lower is better)
Translates to: GCFLGTISGNHPKPS*RSMVLHSDSILVTS
Trigger: TGATGTTACCAGTATACTATCAGAATGTAGCACCATTGATCTTCAGGATGGCTTTGGATGGTTACCTGAGATGGTTCCCAAAAAGCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CCA 90 bp ATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATaGTCAAGGATGGATTTCATGGCTTTGGGTTGGTTGTATGATTCA +
Preference number: 1 (lower is better)
Translates to: MRHSNVKMTTKTQLR*SRMDFMALGWLYDS
Trigger: TGAATCATACAACCAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR GCA 90 bp AATATGAAGACAATAACACACAATGATGATGATGCATTCGCTTCTTaGATACATTCCCACATATTTTCGATCCATTCCCCGCAGAGGATG +
Preference number: 1 (lower is better)
Translates to: NMKTITHNDDDAFAS*IHSHIFSIHSPQRM
Trigger: CATCCTCTGCGGGGAATGGATCGAAAATATGTGGGAATGTATGCAAGAAGCGAATGCATCATCATCATTGTGTGTTATTGTCTTCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR TCA 90 bp AAACCAGAACACACTATGAACTGTAGCATATTTGTTGTTGTTCTCTaGAACATCTGCAATGCTGCAGTAGCATTAGGAACCAAAATATCT +
Preference number: 1 (lower is better)
Translates to: KPEHTMNCSIFVVVL*NICNAAVALGTKIS
Trigger: AGATATTTTGGTTCCTAATGCTACTGCAGCATTGCAGATGTTTCAGAGAACAACAACAAATATGCTACAGTTCATAGTGTGTTCTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR TCA 90 bp GCTTTATCTACATTAACATCATGGCTTAGAAACCAGAACACACTATaGACTGTAGCATATTTGTTGTTGTTCTCTGAAACATCTGCAATG +
Preference number: 1 (lower is better)
Translates to: ALSTLTSWLRNQNTL*TVAYLLLFSETSAM
Trigger: CATTGCAGATGTTTCAGAGAACAACAACAAATATGCTACAGTTCATAGTGTGTTCTGGTTTCTAAGCCATGATGTTAATGTAGATAAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR-3UTR TCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCGCAGGTTCCACCAAATaGCCCAGGGAGGCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: VLIPRAARTSLRIRPIRAAGSTK*PREAFS
Trigger: AGAGAAAGCCTCCCTGGGTCATTTGGTGGAACCTGC...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp TTAACGCACAGCCACTGGGGGCAACAGTTCCACACGAGGTACTTGGATGCCAGGAGTCCTGATTCCTCGTaGAGCCCGGACAAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LTHSHWGQQFHTRYLDARSPDSS*SPDKPQ
Trigger: CTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGACT...CCTGGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCATTGTACCTTTAGGCTaGAGCTGCCCATGGATCTTT +
Preference number: 2 (lower is better)
Translates to: VLIPRAARTSLRIRPIRAIVPLG*SCPWIF
Trigger: AAAGATCCATGGGCAGCTTCAGCCTAAAGGTACAAT...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675223.1
3UTR-3UTR CCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCTCCAGTGATAGATTCTaGGACAGTCGTTTGGTTTGC +
Preference number: 2 (lower is better)
Translates to: VLIPRAARTSLRIRPIRASSDRF*DSRLVC
Trigger: GCAAACCAAACGACTGTCCCAGAATCTATCACTGGA...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp CCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCATCAAAGAGGAGAGTCCTaGTTCCTCGTGCAGCCCGGA +
Preference number: 2 (lower is better)
Translates to: PHFELSGSWASCSPDGAHQRGES*FLVQPG
Trigger: TCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTG...ATGAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTATCGCAGCATGGGGCTaGGCAGGGAATCCCAACCTG +
Preference number: 2 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTIAAWG*AGNPNL
Trigger: CAGGTTGGGATTCCCTGCTCAGCCCCATGCTGCGAT...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp CACCAGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCCCAAGCGGACAATTCTaGAGAGCGTCGGAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: HQKIQRHLPPPQVVPTKSPSGQF*RASEGK
Trigger: CTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTGG...GGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAACAAAGAGGAGAGTCCTaGTTCCTCGTGCAGCCCGGA +
Preference number: 2 (lower is better)
Translates to: ADNSEERRRERNVLLIFQQRGES*FLVQPG
Trigger: TCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTG...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAACAAAGAGGAGAGTCCTaGTTCCTCGTGCAGCCCGGA +
Preference number: 2 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEQRGES*FLVQPG
Trigger: TCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTG...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCGCAAGGCCCCCACGATaGCCTTCAGACGTGAAACTA +
Preference number: 2 (lower is better)
Translates to: FHTLNSLARGLLVLLMELARPPR*PSDVKL
Trigger: TAGTTTCACGTCTGAAGGTCATCGTGGGGGCCTTGC...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCACCAGCCCTTAAATGTTaGCACTTGCAGCAGAGCGAG +
Preference number: 2 (lower is better)
Translates to: AIRATEYPSGEGEKNIHAPALKC*HLQQSE
Trigger: CTCGCTCTGCTGCAAGTGGCAACATTTAAGGGCTGG...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp CACCAGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCTTAACGCACAGCCACTaGGGGCAACAGTTCCACACG +
Preference number: 2 (lower is better)
Translates to: HQKIQRHLPPPQVVPTKSLTHSH*GQQFHT
Trigger: CGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAA...GGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CAA 90 bp TTCTTAACGCACAGCCACTGGGGGCAACAGTTCCACACGAGGTACTaGGATGCCAGGTTTTCTCCACAAGGGAGACAAGGCTCTTGTGAT +
Preference number: 2 (lower is better)
Translates to: FLTHSHWGQQFHTRY*DARFSPQGRQGSCD
Trigger: ATCACAAGAGCCTTGTCTCCCTTGTGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATCCAAGCGGACAATTCTaGAGAGCGTCGGAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHPSGQF*RASEGK
Trigger: CTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTGG...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCGGAATCCCAACCTGCTaGTGTGCTTATCTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVGIPTC*CAYLEE
Trigger: CTCTTCCAGATAAGCACATCAGCAGGTTGGGATTCC...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTATCGCAGCATGGGGCTaGGCAGGGAATCCCAACCTG +
Preference number: 2 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCIAAWG*AGNPNL
Trigger: CAGGTTGGGATTCCCTGCTCAGCCCCATGCTGCGAT...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTAGTCCTGATTCCTCGTaGAGCCCGGACAAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: TSLHCKESGVVNEARFPSSPDSS*SPDKPQ
Trigger: CTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGACT...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp CACCAGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCACCACTAGGAAGGAGTaGCAGAAATCCCCCATGTGC +
Preference number: 2 (lower is better)
Translates to: HQKIQRHLPPPQVVPTKSTTRKE*QKSPMC
Trigger: GCACATGGGGGATTTCTGGCACTCCTTCCTAGTGGT...GGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCGTCCACGCTACAGCATaGAAAGCAGCAACCAAAGCC +
Preference number: 2 (lower is better)
Translates to: FHTLNSLARGLLVLLMELVHATA*KAATKA
Trigger: GGCTTTGGTTGCTGCTTTCCATGCTGTAGCGTGGAC...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCAGCACCAGGCACTGGTaGAATACTTTCCAAATCCGA +
Preference number: 2 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAISTRHW*NTFQIR
Trigger: TCGGATTTGGAAAGTATTTCACCAGTGCCTGGTGCT...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCAGTAGGATGTGGCTATaGCAGGGAGGTGGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: FHTLNSLARGLLVLLMELSRMWL*QGGGSF
Trigger: AAAACTGCCACCTCCCTGGCATAGCCACATCCTACT...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAAGTCACAGTGGACCTTaGCCTTGGCCACCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQSHSGP*PWPPQS
Trigger: GCTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACT...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGTCACAGTGGACCTTaGCCTTGGCCACCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVSHSGP*PWPPQS
Trigger: GCTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACT...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCCCAAGCGGACAATTCTaGAGAGCGTCGGAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVPSGQF*RASEGK
Trigger: CTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTGG...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCGAGGATTGGCTTCCATaGACTTCTCTTCCATCATTG +
Preference number: 2 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVEDWLP*TSLPSL
Trigger: CAATGATGGAAGAGAAGTTCATGGAAGCCAATCCTC...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAAAGAGTCTGGAGTGGTaGATGAGGCCCGTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: ADNSEERRRERNVLLIFQKSLEW*MRPVFQ
Trigger: TTGGAAAACGGGCCTCATTCACCACTCCAGACTCTT...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTGCAGGTTCCACCAAATaGCCCAGGGAGGCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCAGSTK*PREAFS
Trigger: AGAGAAAGCCTCCCTGGGTCATTTGGTGGAACCTGC...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCTTGCTTTCAAAGCTCTaGACACACGGAAGGTACGCA +
Preference number: 2 (lower is better)
Translates to: FHTLNSLARGLLVLLMELLLSKL*THGRYA
Trigger: TGCGTACCTTCCGTGTGTTCAGAGCTTTGAAAGCAA...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCATCTTCATCAGAATCTaGCCCAGGAGGCTGGTCTTT +
Preference number: 2 (lower is better)
Translates to: FHTLNSLARGLLVLLMELIFIRI*PRRLVF
Trigger: AAAGACCAGCCTCCTGGGTCAGATTCTGATGAAGAT...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTTTCATTCCTTCAAACTaGGACAGCGCACGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTFIPSN*DSARRG
Trigger: GCCTCTTCGTGCGCTGTCCCAGTTTGAAGGAATGAA...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp CACCAGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCCGATCCAGTGCTAACTaGACTTTAGTTTTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: HQKIQRHLPPPQVVPTKSRSSAN*TLVFLA
Trigger: GGCCAGGAAAACTAAAGTCCAGTTAGCACTGGATCG...GGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CAA 90 bp GGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTTCCACACTTaGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTC +
Preference number: 2 (lower is better)
Translates to: GQMRLIFREHVNFHT*NSLARGLLVLLMEL
Trigger: GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGTTCTCTGAAGATGAGCCTCATCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCGTCTGGAGTGGTGAATaGGGCCCGTTTTCCAAGTCA +
Preference number: 2 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVVWSGE*GPFSKS
Trigger: TGACTTGGAAAACGGGCCTCATTCACCACTCCAGAC...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp CACTCTGAAGGAACGCAAGAATGGCCAGCTTCTCTTTTGAAGTACACAGTTCATCTGGCCTCCATCTTGTaGTGCTCCATGGCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: HSEGTQEWPASLLKYTVHLASIL*CSMAKK
Trigger: CTTCTTGGCCATGGAGCATCACAAGATGGAGGCCAG...ATGAACTGTGTACTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTCAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCATGTAACCGAGTGAATTaGTCTCAAACTCTGGCTGTT +
Preference number: 2 (lower is better)
Translates to: AIRATEYPSGEGEKNIHACNRVN*SQTLAV
Trigger: AACAGCCAGAGTTTGAGAGCAATTCACTCGGTTACA...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTGCTGATGTGCTTATCTaGAAGAGACAGAGCATGCTG +
Preference number: 2 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTADVLI*KRQSML
Trigger: CAGCATGCTCTGTCTCTTCCAGATAAGCACATCAGC...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACGCTATGCCAGGGAGGTaGCAGTTTTCTGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNAMPGR*QFSEEE
Trigger: CTCTTCCTCAGAAAACTGCCACCTCCCTGGCATAGC...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTTTCTCCCAGGAATCTTaGGTCATCAGCCGGAACATG +
Preference number: 2 (lower is better)
Translates to: TSLHCKESGVVNEARFPSFSQES*VISRNM
Trigger: CATGTTCCGGCTGATGACCCAAGATTCCTGGGAGAA...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCTTCTGTCAATTCCCATaGCAACCAGAGCCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: FHTLNSLARGLLVLLMELFCQFP*QPEPPF
Trigger: AAAAGGAGGCTCTGGTTGCCATGGGAATTGACAGAA...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTGGAATCCCAACCTGCTaGTGTGCTTATCTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCGIPTC*CAYLEE
Trigger: CTCTTCCAGATAAGCACATCAGCAGGTTGGGATTCC...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAATTCTCTTGGTGGTGGTaGCTATGGGTTCATACAACT +
Preference number: 2 (lower is better)
Translates to: ADNSEERRRERNVLLIFQFSWWW*LWVHTT
Trigger: AGTTGTATGAACCCATAGTCACCACCACCAAGAGAA...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCAGTCTGGAGTGGTGAATaGGGCCCGTTTTCCAAGTCA +
Preference number: 2 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSVWSGE*GPFSKS
Trigger: TGACTTGGAAAACGGGCCTCATTCACCACTCCAGAC...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTAAGAGTCTGGAGTGGTaGATGAGGCCCGTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCKSLEW*MRPVFQ
Trigger: TTGGAAAACGGGCCTCATTCACCACTCCAGACTCTT...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAACATCCAAAGCCATCCTaGAGATCAATGGTGCTACAT +
Preference number: 2 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEHPKPS*RSMVLH
Trigger: ATGTAGCACCATTGATCTTCAGGATGGCTTTGGATG...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTTCGAACACGAGACCTTaGCATTTGTTCAGAGGCCGT +
Preference number: 2 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCSNTRP*HLFRGR
Trigger: ACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGA...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTTCGAACACGAGACCTTaGCATTTGTTCAGAGGCCGT +
Preference number: 2 (lower is better)
Translates to: TCQFPHFELSGSWASCSPSNTRP*HLFRGR
Trigger: ACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGA...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCAAGGCATGCTTGGCACTaGAGCGGTAGATTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: SIPDSGFTLENQFIPRMARHAWH*SGRLSS
Trigger: AGAGGACAATCTACCGCTTCAGTGCCAAGCATGCCT...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp CACTCTGAAGGAACGCAAGAATGGCCAGCTTCTCTTTTGAAGTACACAGTTCATGGTTCAGACTTCCCATaGAGAGCTGCTGACCTACCA +
Preference number: 2 (lower is better)
Translates to: HSEGTQEWPASLLKYTVHGSDFP*RAADLP
Trigger: TGGTAGGTCAGCAGCTCTTCATGGGAAGTCTGAACC...ATGAACTGTGTACTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTCAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAACAGGCTCAGGTTGTGTaGTGCGCTGTGCATTATCTT +
Preference number: 2 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQQAQVV*CAVHYL
Trigger: AAGATAATGCACAGCGCATCACACAACCTGAGCCTG...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCCCAACCTGCTGATGTaGTTATCTGGAAGAGACAGA +
Preference number: 2 (lower is better)
Translates to: TSLHCKESGVVNEARFPSPNLLM*LSGRDR
Trigger: TCTGTCTCTTCCAGATAAGCACATCAGCAGGTTGGG...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTAGTAGGATGTGGCTATaGCAGGGAGGTGGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCSRMWL*QGGGSF
Trigger: AAAACTGCCACCTCCCTGGCATAGCCACATCCTACT...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAACTTGGCCTCTATCTCTaGAGCTACATTCTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: LATPKLDKSPLQRVWSGELGLYL*SYILVL
Trigger: CAGAACAAGAATGTAGCTGCAGAGATAGAGGCCAAG...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CCA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGGATCTTCACTCACCATaGGCAAGTCCATTACTAGAA +
Preference number: 2 (lower is better)
Translates to: LACDYVEHETLTFVQRPWDLHSP*ASPLLE
Trigger: TTCTAGTAATGGACTTGCCCATGGTGAGTGAAGATC...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGGTAATTCTTGGATTTTaGGTTGGTTCTCAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: AFILSRPSEPPSTLAVKAVILGF*VGSQGE
Trigger: TTCACCTTGAGAACCAACCCAAAATCCAAGAATTAC...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAACCATGCTCATCAAAGTaGTCCAGTGATAGATTCTGG +
Preference number: 2 (lower is better)
Translates to: ADNSEERRRERNVLLIFQPCSSK*SSDRFW
Trigger: CCAGAATCTATCACTGGACCACTTTGATGAGCATGG...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CCA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTAGTGCTCTCTGCCTTTaGAGAGGATCTCCATGCTCA +
Preference number: 2 (lower is better)
Translates to: TCQFPHFELSGSWASCSPSALCL*RGSPCS
Trigger: TGAGCATGGAGATCCTCTCCAAAGGCAGAGAGCACT...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATGTCTGGAGTGGTGAATaGGGCCCGTTTTCCAAGTCA +
Preference number: 2 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDVWSGE*GPFSKS
Trigger: TGACTTGGAAAACGGGCCTCATTCACCACTCCAGAC...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATATACGAGCCAGAAAATaGGGCAGACAAGCAAAACAT +
Preference number: 2 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHIRARK*GRQAKH
Trigger: ATGTTTTGCTTGTCTGCCTCATTTTCTGGCTCGTAT...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTAAGCTTCCGGGTTACTaGTATTTTTACAGTCCCTCG +
Preference number: 2 (lower is better)
Translates to: TSLHCKESGVVNEARFPSKLPGY*YFYSPS
Trigger: CGAGGGACTGTAAAAATATCAGTAACCCGGAAGCTT...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCACTGCATGCCAACTACTaGGAAAATAAAGATCACAAT +
Preference number: 2 (lower is better)
Translates to: AIRATEYPSGEGEKNIHALHANY*ENKDHN
Trigger: ATTGTGATCTTTATTTTCTCAGTAGTTGGCATGCAG...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCTTGGCCCAGTTTTCTaGTTTGTGGATAGTTTGAAC +
Preference number: 2 (lower is better)
Translates to: DILLKAQSRVGHGALYRGLGPVF*FVDSLN
Trigger: GTTCAAACTATCCACAAAGCAGAAAACTGGGCCAAG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR-3UTR GCA 90 bp AACATGAGACTGTCGGGCCTGTCGGGTTACAGAGTTTTGGACTCTTTTGGGAATCGAAAAGAATATCCATaGAGTGGAGGCGATCTTCAC +
Preference number: 2 (lower is better)
Translates to: NMRLSGLSGYRVLDSFGNRKEYP*SGGDLH
Trigger: GTGAAGATCGCCTCCACTGCATGGATATTCTTTTCG...ATTCCCAAAAGAGTCCAAAACTCTGTAACCCGACAGGCCCGACAGTCTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTCCAGCCCTTAAATGTTaGCACTTGCAGCAGAGCGAG +
Preference number: 2 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPPALKC*HLQQSE
Trigger: CTCGCTCTGCTGCAAGTGGCAACATTTAAGGGCTGG...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCACAGAAATCCCCCATGTaGCAGTGCCGTAAACATGAG +
Preference number: 2 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSQKSPM*QCRKHE
Trigger: CTCATGTTTACGGCACTGGCACATGGGGGATTTCTG...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCAAACCAAGTCCAATCATaGCTGACGCCCAGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSNQVQS*LTPRVF
Trigger: AAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTT...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACAGAATATCCATGCAGTaGAGGCGATCTTCACTCACC +
Preference number: 2 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNRISMQ*RRSSLT
Trigger: GGTGAGTGAAGATCGCCTCCACTGCATGGATATTCT...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTCGGGGATCCTGTATaGTCAGATGAGGCTCATCTT +
Preference number: 2 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQFGDPV*SDEAHL
Trigger: AAGATGAGCCTCATCTGACCATACAGGATCCCCGAA...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGTCTCTGGTTGCTTTTTaGGAACCATCTCAGGTAACC +
Preference number: 2 (lower is better)
Translates to: IYLALRHAKAQARHQQSQSLVAF*EPSQVT
Trigger: GGTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGA...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATGTCCACGCTACAGCATaGAAAGCAGCAACCAAAGCC +
Preference number: 2 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDVHATA*KAATKA
Trigger: GGCTTTGGTTGCTGCTTTCCATGCTGTAGCGTGGAC...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGATTGCTCTCAAACTCTaGCTGTTGTTCTTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: LACDYVEHETLTFVQRPWIALKL*LLFFLC
Trigger: ACAGAGAAAGAACAACAGCCAGAGTTTGAGAGCAAT...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CAA 90 bp GACCCTGAGCACTCTGAAGGAACGCAAGAATGGCCAGCTTCTCTTTaGAAGTACACAGTTCATTACATCTGCAAAACTCAGAAGAGCAAC +
Preference number: 2 (lower is better)
Translates to: DPEHSEGTQEWPASL*KYTVHYICKTQKSN
Trigger: GTTGCTCTTCTGAGTTTTGCAGATGTAATGAACTGTGTACTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTCAGAGTGCTCAGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAAAAGGAATGTGCTCCTaGTTTTCCAAGGTAGAAATC +
Preference number: 2 (lower is better)
Translates to: ADNSEERRRERNVLLIFQKGMCS*FSKVEI
Trigger: GATTTCTACCTTGGAAAATCAGGAGCACATTCCTTT...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAGTAGAAGACCAATGTTaGACAGAGAAGGAAGCGACA +
Preference number: 2 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQVEDQC*TEKEAT
Trigger: TGTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTAC...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACGAGGATTGGCTTCCATaGACTTCTCTTCCATCATTG +
Preference number: 2 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNEDWLP*TSLPSL
Trigger: CAATGATGGAAGAGAAGTTCATGGAAGCCAATCCTC...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATCAATTTCCACACTTTaGACTCTCTGGCTCGTGGGC +
Preference number: 2 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKSISTL*TLWLVG
Trigger: GCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGA...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTTCAATTTCCACACTTTaGACTCTCTGGCTCGTGGGC +
Preference number: 2 (lower is better)
Translates to: FLSLGGGDYGFIQLLERISISTL*TLWLVG
Trigger: GCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGA...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATCCTGTATGGTCAGATaGGGCTCATCTTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: SIPDSGFTLENQFIPRMASCMVR*GSSSEN
Trigger: GTTCTCTGAAGATGAGCCTCATCTGACCATACAGGA...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCAGGTTGGTTCTCAAGGTaGACATCTTCAAATATCAGT +
Preference number: 2 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSGWFSR*TSSNIS
Trigger: ACTGATATTTGAAGATGTTCACCTTGAGAACCAACC...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCATAGGGCTTATAGTTaGACAGGAAAGGTAGAACTT +
Preference number: 2 (lower is better)
Translates to: DILLKAQSRVGHGALYRGHRAYS*TGKVEL
Trigger: AAGTTCTACCTTTCCTGTGCAACTATAAGCCCTATG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR-3UTR GCA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCGAAAAGAATATCCATaGAGTGGAGGCGATCTTCAC +
Preference number: 2 (lower is better)
Translates to: HCKESGVVNEARFPSHFGRKEYP*SGGDLH
Trigger: GTGAAGATCGCCTCCACTGCATGGATATTCTTTTCG...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAAAAACATCTCTCTGGTTaGTTTTTGGGAACCATCTCA +
Preference number: 2 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEKHLSG*FLGTIS
Trigger: TGAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTT...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCAAGAATATCCATGCAGTaGAGGCGATCTTCACTCACC +
Preference number: 2 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSRISMQ*RRSSLT
Trigger: GGTGAGTGAAGATCGCCTCCACTGCATGGATATTCT...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTGGGCAAACATCTCTCTaGTTGCTTTTTGGGAACCAT +
Preference number: 2 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCGQTSL*LLFGNH
Trigger: ATGGTTCCCAAAAAGCAACCAGAGAGATGTTTGCCC...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACAGCAACCAAAGCCTTTaGGCAAACATCTCTCTGGTT +
Preference number: 2 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNSNQSL*ANISLV
Trigger: AACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCT...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATTTCATTCCTTCAAACTaGGACAGCGCACGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDFIPSN*DSARRG
Trigger: GCCTCTTCGTGCGCTGTCCCAGTTTGAAGGAATGAA...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp CCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCATGTTGTTCTTTCTCTGTaGAATCAACAGCTGCATATA +
Preference number: 2 (lower is better)
Translates to: PHFELSGSWASCSPDGAHVVLSL*NQQLHI
Trigger: TATATGCAGCTGTTGATTCCACAGAGAAAGAACAAC...ATGAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGAAGACCCAGTTGAGATaGTCAAGGATGGATTTCATG +
Preference number: 2 (lower is better)
Translates to: DHKDPVEMVKDGFHGFGLKTQLR*SRMDFM
Trigger: CATGAAATCCATCCTTGACCATCTCAACTGGGTCTT...CAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAAATGCTGAACAATGAATaGACTGAGACTCTAATGGCT +
Preference number: 2 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEMLNNE*TETLMA
Trigger: AGCCATTAGAGTCTCAGTCCATTCATTGTTCAGCAT...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CAA 90 bp TTGGTCACCCTTGGTCACCTTCATCATGTACTTTCGAAAGGCCTTTaGAATAATAGCAGCACCTCTTTCCTCTTCCTTTCTCTTGGTGGT +
Preference number: 2 (lower is better)
Translates to: LVTLGHLHHVLSKGL*NNSSTSFLFLSLGG
Trigger: ACCACCAAGAGAAAGGAAGAGGAAAGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAAGTACATGATGAAGGTGACCAAGGGTGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR CAA 90 bp GCTTTCAAAGCTCTGAACACACGGAAGGTACGCAGGGGCAATAGTTaGATGGTGATTCCTGGAATATATGACACAATCGCTATTCCAATG +
Preference number: 2 (lower is better)
Translates to: AFKALNTRKVRRGNS*MVIPGIYDTIAIPM
Trigger: CATTGGAATAGCGATTGTGTCATATATTCCAGGAATCACCATCAAACTATTGCCCCTGCGTACCTTCCGTGTGTTCAGAGCTTTGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGGCCTTGTATAGGGGTTaGAAGGGGGCACAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: QCCSSIRNQNILIQYICLALYRG*KGAQQC
Trigger: GCACTGCTGTGCCCCCTTTCAACCCCTATACAAGGC...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR-3UTR TCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTAAAGGAATGTGCTCCTaGTTTTCCAAGGTAGAAATC +
Preference number: 2 (lower is better)
Translates to: TSLHCKESGVVNEARFPSKGMCS*FSKVEI
Trigger: GATTTCTACCTTGGAAAATCAGGAGCACATTCCTTT...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TGGAAAGCAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTTGGGAAAGGAATGTGCTCCTaGTTTTCCAAGGTAGAAATC +
Preference number: 2 (lower is better)
Translates to: WKAATKAFGQTSLWLLFGKGMCS*FSKVEI
Trigger: GATTTCTACCTTGGAAAATCAGGAGCACATTCCTTT...CCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTGCTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATTCCTGTATGGTCAGATaGGGCTCATCTTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDSCMVR*GSSSEN
Trigger: GTTCTCTGAAGATGAGCCTCATCTGACCATACAGGA...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCACATCCAAAGCCATCCTaGAGATCAATGGTGCTACAT +
Preference number: 2 (lower is better)
Translates to: SIPDSGFTLENQFIPRMAHPKPS*RSMVLH
Trigger: ATGTAGCACCATTGATCTTCAGGATGGCTTTGGATG...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGGTTGGTTGTATaGTTCAGCCATCATGCTAAT +
Preference number: 2 (lower is better)
Translates to: SLHCKESGVVNEARFPSHFGLVV*FSHHAN
Trigger: ATTAGCATGATGGCTGAATCATACAACCAACCCAAA...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp CACTCTGAAGGAACGCAAGAATGGCCAGCTTCTCTTTTGAAGTACACAGTTCATAATGAAGAAGAAGACTaGGTAGAGCCCAGTAGTACG +
Preference number: 2 (lower is better)
Translates to: HSEGTQEWPASLLKYTVHNEEED*VEPSST
Trigger: CGTACTACTGGGCTCTACTCAGTCTTCTTCTTCATT...ATGAACTGTGTACTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTCAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTATCTTCAAATATCAGTaGCCCACTGCTCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: DIYLALRHAKAQARHQQSIFKYQ*PTAQQN
Trigger: ATTCTGCTGAGCAGTGGGGCACTGATATTTGAAGAT...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCGATCTTCACTCACCATaGGCAAGTCCATTACTAGAA +
Preference number: 2 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVDLHSP*ASPLLE
Trigger: TTCTAGTAATGGACTTGCCCATGGTGAGTGAAGATC...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAAGAATATCCATGCAGTaGAGGCGATCTTCACTCACC +
Preference number: 2 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKRISMQ*RRSSLT
Trigger: GGTGAGTGAAGATCGCCTCCACTGCATGGATATTCT...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCATACATTCATATTGTATaGAACAGGCACTGTTACCCA +
Preference number: 2 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSYIHIV*NRHCYP
Trigger: TGGGTAACAGTGCCTGTTCCATACAATATGAATGTA...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CAA 90 bp TCACCATGGGCAAGTCCATTACTAGAAATTGATATTTATTTGGCTTaGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: SPWASPLLEIDIYLA*RHAKAQARHQQSQK
Trigger: TTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATCAATTTCTAGTAATGGACTTGCCCATGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR CAA 90 bp ACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTaGGGTTGGTTGTATGATTCAGCCATCATGCTAATCATGTTTAGG +
Preference number: 2 (lower is better)
Translates to: TTKTQLRWSRMDFMA*GWLYDSAIMLIMFR
Trigger: CCTAAACATGATTAGCATGATGGCTGAATCATACAACCAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTGTAGAAGACCAATGTTaGACAGAGAAGGAAGCGACA +
Preference number: 2 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPVEDQC*TEKEAT
Trigger: TGTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTAC...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAGAGGATTGGCTTCCATaGACTTCTCTTCCATCATTG +
Preference number: 2 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKEDWLP*TSLPSL
Trigger: CAATGATGGAAGAGAAGTTCATGGAAGCCAATCCTC...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp AAAGATGACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTTTCTCTTGGTGGTGGTaGCTATGGGTTCATACAACT +
Preference number: 2 (lower is better)
Translates to: KDDHKDPVEMVKDGFHGFFSWWW*LWVHTT
Trigger: AGTTGTATGAACCCATAGTCACCACCACCAAGAGAA...AAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATTTCTCTTGGTGGTGGTaGCTATGGGTTCATACAACT +
Preference number: 2 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDFSWWW*LWVHTT
Trigger: AGTTGTATGAACCCATAGTCACCACCACCAAGAGAA...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCTTTCGAAAGGCCTTTTaGATAATAGCAGCACCTCTT +
Preference number: 2 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVFRKAF*IIAAPL
Trigger: AAGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAA...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAATATAAATCCCAGTaGAGACACACTCTGCAATGT +
Preference number: 2 (lower is better)
Translates to: IYLALRHAKAQARHQQSQKYKSQ*RHTLQC
Trigger: ACATTGCAGAGTGTGTCTTCACTGGGATTTATATTT...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCATATTTATTTGGCTTTaGGACACGCAAAGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFIFIWL*DTQRLR
Trigger: CCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAAAACATCTCTCTGGTTaGTTTTTGGGAACCATCTCA +
Preference number: 2 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQKHLSG*FLGTIS
Trigger: TGAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTT...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACATCGATTCCAGACTCTaGATTCACTTTGGAAAACCA +
Preference number: 2 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNIDSRL*IHFGKP
Trigger: TGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGAT...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTTCTCTGGTTGCTTTTTaGGAACCATCTCAGGTAACC +
Preference number: 2 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPSLVAF*EPSQVT
Trigger: GGTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGA...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp AAAGATGACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGCAAACATCTCTCTaGTTGCTTTTTGGGAACCAT +
Preference number: 2 (lower is better)
Translates to: KDDHKDPVEMVKDGFHGFGQTSL*LLFGNH
Trigger: ATGGTTCCCAAAAAGCAACCAGAGAGATGTTTGCCC...AAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAATTGCTCTCAAACTCTaGCTGTTGTTCTTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQIALKL*LLFFLC
Trigger: ACAGAGAAAGAACAACAGCCAGAGTTTGAGAGCAAT...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACATGATGTCAAAGATCTaGCTTGTGACTATGTCGAAC +
Preference number: 2 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNMMSKI*LVTMSN
Trigger: GTTCGACATAGTCACAAGCCAGATCTTTGACATCAT...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCAACATCTTCTCAAAACTaGCCTCCATCTTGTGATGCT +
Preference number: 2 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSTSSQN*PPSCDA
Trigger: AGCATCACAAGATGGAGGCCAGTTTTGAGAAGATGT...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACCGGGTTACAGAGTTTTaGACTCTTTTGGGAATTGAA +
Preference number: 2 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNRVTEF*TLLGIE
Trigger: TTCAATTCCCAAAAGAGTCCAAAACTCTGTAACCCG...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CAA 90 bp AACAATGAATGGACTGAGACTCTAATGGCTAAACTTCTGATTGAATaGAAAGGCCCAAAAATGAACAAGGCATGCTTGGCACTGAAGCGG +
Preference number: 2 (lower is better)
Translates to: NNEWTETLMAKLLIE*KGPKMNKACLALKR
Trigger: CCGCTTCAGTGCCAAGCATGCCTTGTTCATTTTTGGGCCTTTCAATTCAATCAGAAGTTTAGCCATTAGAGTCTCAGTCCATTCATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR TCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTGATTCCTGGAATATATaGCACAATCGCTATTCCAAT +
Preference number: 2 (lower is better)
Translates to: DIYLALRHAKAQARHQQSDSWNI*HNRYSN
Trigger: ATTGGAATAGCGATTGTGTCATATATTCCAGGAATC...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGAAGGGGGCACAGCAGTaGCACAGGGGCACAATAATT +
Preference number: 2 (lower is better)
Translates to: QCCSSIRNQNILIQYICLKGAQQ*HRGTII
Trigger: AATTATTGTGCCCCTGTGGCACTGCTGTGCCCCCTT...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR-3UTR GCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTATATTTATTTGGCTTTaGGACACGCAAAGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPIFIWL*DTQRLR
Trigger: CCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp AAAGATGACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTATCTTCAAATATCAGTaGCCCACTGCTCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: KDDHKDPVEMVKDGFHGFIFKYQ*PTAQQN
Trigger: ATTCTGCTGAGCAGTGGGGCACTGATATTTGAAGAT...AAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTGCTACATTCTTGTTCTaGTCCTCATATGCCATGGTA +
Preference number: 2 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPATFLF*SSYAMV
Trigger: TACCATGGCATATGAGGAGCAGAACAAGAATGTAGC...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTAAGCCCAATCTAGAGTaGGCCATGGGGCCTTGTATA +
Preference number: 2 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFKPNLE*AMGPCI
Trigger: TATACAAGGCCCCATGGCCCACTCTAGATTGGGCTT...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR-3UTR CCA 90 bp ATTTTGATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATGGGCTGATGTGCTTATCTaGAAGAGACAGAGCATGCTG +
Preference number: 2 (lower is better)
Translates to: ILMRHSNVKMTTKTQLRWADVLI*KRQSML
Trigger: CAGCATGCTCTGTCTCTTCCAGATAAGCACATCAGC...CCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCATCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCATCCTGAAGATCAATaGTGCTACATTCTGATAGTA +
Preference number: 2 (lower is better)
Translates to: DIYLALRHAKAQARHQQSHPEDQ*CYILIV
Trigger: TACTATCAGAATGTAGCACCATTGATCTTCAGGATG...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CAA 90 bp ACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGGTaGTATGATTCAGCCATCATGCTAATCATGTTTAGGATAATGAGA +
Preference number: 2 (lower is better)
Translates to: TQLRWSRMDFMALGW*YDSAIMLIMFRIMR
Trigger: TCTCATTATCCTAAACATGATTAGCATGATGGCTGAATCATACAACCAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTTTTCGAAAGGCCTTTTaGATAATAGCAGCACCTCTT +
Preference number: 2 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPFRKAF*IIAAPL
Trigger: AAGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAA...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGTTGGTTCTCAAGGTaGACATCTTCAAATATCAGT +
Preference number: 2 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIGWFSR*TSSNIS
Trigger: ACTGATATTTGAAGATGTTCACCTTGAGAACCAACC...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGAGTAGGATGTGGCTATaGCAGGGAGGTGGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKSRMWL*QGGGSF
Trigger: AAAACTGCCACCTCCCTGGCATAGCCACATCCTACT...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR GCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCACCTGAAGATCAATGGTaGTACATTCTGATAGTATAC +
Preference number: 2 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSPEDQW*YILIVY
Trigger: GTATACTATCAGAATGTAGCACCATTGATCTTCAGG...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCAGTAATTCTTGGATTTTaGGTTGGTTCTCAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSVILGF*VGSQGE
Trigger: TTCACCTTGAGAACCAACCCAAAATCCAAGAATTAC...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CAA 90 bp ATTTTGATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTaGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGGTTGTAT +
Preference number: 2 (lower is better)
Translates to: ILMRHSNVKMTTKTQ*RWSRMDFMALGWLY
Trigger: ATACAACCAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCATCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR TCA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGCAATCGCTATTCCAATaGCAATGGAGTCCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKQSLFQ*QWSPAS
Trigger: ACTGGCTGGACTCCATTGTCATTGGAATAGCGATTG...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATAGTGAAGACACACTCTaGAATGTCAGTATTGTTACT +
Preference number: 2 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDSEDTL*NVSIVT
Trigger: AGTAACAATACTGACATTGCAGAGTGTGTCTTCACT...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR GCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATACAGTTCATTACATCTaGAAAACTCAGAAGAGCAAC +
Preference number: 2 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDTVHYI*KTQKSN
Trigger: GTTGCTCTTCTGAGTTTTGCAGATGTAATGAACTGT...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CCA 90 bp AAAGATGACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTCATCCTGAAGATCAATaGTGCTACATTCTGATAGTA +
Preference number: 2 (lower is better)
Translates to: KDDHKDPVEMVKDGFHGFHPEDQ*CYILIV
Trigger: TACTATCAGAATGTAGCACCATTGATCTTCAGGATG...AAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGGATCTGGCACCCATGTaGATTTTGAACAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: QCCSSIRNQNILIQYICLDLAPM*ILNKGK
Trigger: TTTTCCTTTGTTCAAAATCCACATGGGTGCCAGATC...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGGCACAGTTCACACTGTaGTTTAAGTTAACATGGGAT +
Preference number: 2 (lower is better)
Translates to: QCCSSIRNQNILIQYICLAQFTL*FKLTWD
Trigger: ATCCCATGTTAACTTAAACCACAGTGTGAACTGTGC...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGCAGAGTAAGCACTTATaGTTTAGCCATGAAGAATTT +
Preference number: 2 (lower is better)
Translates to: QCCSSIRNQNILIQYICLQSKHL*FSHEEF
Trigger: AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTG...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR-3UTR CAA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCCAGTGGACCTTGCCCTaGGCCACCCCAAAGCTAGAC +
Preference number: 3 (lower is better)
Translates to: VLIPRAARTSLRIRPIRAQWTLP*ATPKLD
Trigger: GTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCACTG...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCGCCATGAACACGCAGTaGATGATAACGGTGCCGATA +
Preference number: 3 (lower is better)
Translates to: VLIPRAARTSLRIRPIRAAMNTQ*MITVPI
Trigger: TATCGGCACCGTTATCATCAACTGCGTGTTCATGGC...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCCAGTGGACCTTGCCCTaGGCCACCCCAAAGCTAGAC +
Preference number: 3 (lower is better)
Translates to: FHTLNSLARGLLVLLMELQWTLP*ATPKLD
Trigger: GTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCACTG...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp TGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAATTCTGTCAATTTCCACACTTaGAACTCTCTGGCTCGTGGG +
Preference number: 3 (lower is better)
Translates to: CSPDKPQDSANPSQADNSVNFHT*NSLARG
Trigger: CCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGAC...AGAATTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR GCA 72 bp CCACTGGGGGCAACAGTTCCACACGAGGTACTTGGATaGCAGGTTTTCTCCACAAGGGAGACAAGGCTCTTG +
Preference number: 3 (lower is better)
Translates to: PLGATVPHEVLG*QVFSTRETRLL
Trigger: CAAGAGCCTTGTCTCCCTTGTGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 72 bp ACAGCCACTGGGGGCAACAGTTCCACACGAGGTACTTaGATGCCAGGTTTTCTCCACAAGGGAGACAAGGCT +
Preference number: 3 (lower is better)
Translates to: TATGGNSSTRGT*MPGFLHKGDKA
Trigger: AGCCTTGTCTCCCTTGTGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR TCA 72 bp CCTCCGCAAGTGGTGCCAACCAAGTCCAATCATGCCTaGCGCCCAGGGTCTTTGGTACAGAGGTTAGTATAC +
Preference number: 3 (lower is better)
Translates to: PPQVVPTKSNHA*RPGSLVQRLVY
Trigger: GTATACTAACCTCTGTACCAAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTTGGCACCACTTGCGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR GCA 72 bp AATACCACTAGGAAGGAGTGCCAGAAATCCCCCATGTaGCAGTGCCGTAAACATGAGACTGTCGGGCCTGTC +
Preference number: 3 (lower is better)
Translates to: NTTRKECQKSPM*QCRKHETVGPV
Trigger: GACAGGCCCGACAGTCTCATGTTTACGGCACTGGCACATGGGGGATTTCTGGCACTCCTTCCTAGTGGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 72 bp ATCACAGTTCTCAGGACCTTCTTAACGCACAGCCACTaGGGGCAACAGTTCCACACGAGGTACTTGGATGCC +
Preference number: 3 (lower is better)
Translates to: ITVLRTFLTHSH*GQQFHTRYLDA
Trigger: GGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAAGAAGGTCCTGAGAACTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp TTAACGCACAGCCACTGGGGGCAACAGTTCCACACGAGGTACTTGGATGCCAGGCTAGACAAGTCTCCATaGCAAAGAGTCTGGAGTGGT +
Preference number: 3 (lower is better)
Translates to: LTHSHWGQQFHTRYLDARLDKSP*QRVWSG
Trigger: ACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAG...CCTGGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp GACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGCAGTCACAGTGGACCTaGCCCTTGGCCACCCCAAAG +
Preference number: 3 (lower is better)
Translates to: DHKDPVEMVKDGFHGFGLQSQWT*PLATPK
Trigger: CTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACTG...CAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR GCA 72 bp AGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTGGTaGCAACCAAGTCCAATCATGCCTGACGCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: RKFNVIFLLRKW*QPSPIMPDAQG
Trigger: ACCCTGGGCGTCAGGCATGATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 72 bp GACCCAGGGAGGCTTTCTCTTGTCCACGCTACAGCATaGAAAGCAGCAACCAAAGCCTTTGGGCAAACATCT +
Preference number: 3 (lower is better)
Translates to: DPGRLSLVHATA*KAATKAFGQTS
Trigger: AGATGTTTGCCCAAAGGCTTTGGTTGCTGCTTTCCATGCTGTAGCGTGGACAAGAGAAAGCCTCCCTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CCA 72 bp ACCAGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTaGTGCCAACCAAGTCCAATCATGCCTGACGCCCAG +
Preference number: 3 (lower is better)
Translates to: TRKFNVIFLLRK*CQPSPIMPDAQ
Trigger: CTGGGCGTCAGGCATGATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGCTCTCTGGTTGCTTTTaGGGAACCATCTCAGGTAAC +
Preference number: 3 (lower is better)
Translates to: AFILSRPSEPPSTLAVKALSGCF*GTISGN
Trigger: GTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGAG...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp CTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGGCACCTATGAGAGCATaGACCACCACCTTCATTCCT +
Preference number: 3 (lower is better)
Translates to: LALGHPKARQVSIAKSLEAPMRA*TTTFIP
Trigger: AGGAATGAAGGTGGTGGTCAATGCTCTCATAGGTGC...CTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp CCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCATCAGCAACCAAAGCCTTaGGGCAAACATCTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: PHFELSGSWASCSPDGAHQQPKP*GKHLSG
Trigger: ACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTG...ATGAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CCA 72 bp CTGAGCAGGGAATCCCAACCTGCTGATGTGCTTATCTaGAAGAGACAGAGCATGCTGCTGGCAAAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: LSRESQPADVLI*KRQSMLLAKVL
Trigger: CAAGACTTTTGCCAGCAGCATGCTCTGTCTCTTCCAGATAAGCACATCAGCAGGTTGGGATTCCCTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR CCA 72 bp GTCTTTGGTACAGAGGTTAGTATACCAAGCTCCTCCTaGGTCTCTGAGCCCCTTTTCATCTCCATGACCAGG +
Preference number: 3 (lower is better)
Translates to: VFGTEVSIPSSS*VSEPLFISMTR
Trigger: CCTGGTCATGGAGATGAAAAGGGGCTCAGAGACCCAGGAGGAGCTTGGTATACTAACCTCTGTACCAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAACAGCAACCAAAGCCTTaGGGCAAACATCTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: ADNSEERRRERNVLLIFQQQPKP*GKHLSG
Trigger: ACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTG...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCCAGGGAGGCTTTCTCTaGTCCACGCTACAGCATGGA +
Preference number: 3 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVQGGFL*STLQHG
Trigger: TCCATGCTGTAGCGTGGACAAGAGAAAGCCTCCCTG...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CCA 72 bp TCTCCATGCTCATCAAAGTGGTCCAGTGATAGATTCTaGGACAGTCGTTTGGTTTGCTCTAGGAGCTGTGGC +
Preference number: 3 (lower is better)
Translates to: SPCSSKWSSDRF*DSRLVCSRSCG
Trigger: GCCACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGAATCTATCACTGGACCACTTTGATGAGCATGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp CTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGCTGCTGGCAAAAGTCTaGAAGTTGAATATGTCATCG +
Preference number: 3 (lower is better)
Translates to: LALGHPKARQVSIAKSLELLAKV*KLNMSS
Trigger: CGATGACATATTCAACTTCAAGACTTTTGCCAGCAG...CTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGACAGCAATGTACATGTaGACAACAATGAGAAAGGAG +
Preference number: 3 (lower is better)
Translates to: AFILSRPSEPPSTLAVKATAMYM*TTMRKE
Trigger: CTCCTTTCTCATTGTTGTCAACATGTACATTGCTGT...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR TCA 72 bp GCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTaGATGAGGCCCGTTTTCCAAGTCATTTTGGTCACC +
Preference number: 3 (lower is better)
Translates to: ARQVSIAKSLEW*MRPVFQVILVT
Trigger: GGTGACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR CCA 72 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTaGGCTTCTTGTTCTCCTGATGGAGCTCATAGGCCT +
Preference number: 3 (lower is better)
Translates to: TCQFPHFELSGS*ASCSPDGAHRP
Trigger: AGGCCTATGAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCAAGTAGAAGACCAATGTaGAACAGAGAAGGAAGCGAC +
Preference number: 3 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSSRRPM*NREGSD
Trigger: GTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTACT...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCCTGCTGGCAAAAGTCTaGAAGTTGAATATGTCATCG +
Preference number: 3 (lower is better)
Translates to: FHTLNSLARGLLVLLMELLLAKV*KLNMSS
Trigger: CGATGACATATTCAACTTCAAGACTTTTGCCAGCAG...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATCTAGACAAGTCTCCATaGCAAAGAGTCTGGAGTGGT +
Preference number: 3 (lower is better)
Translates to: SLHCKESGVVNEARFPSHLDKSP*QRVWSG
Trigger: ACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAG...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATCAAACATCTCTCTGGTaGCTTTTTGGGAACCATCTC +
Preference number: 3 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHQTSLW*LFGNHL
Trigger: GAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTTG...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTCTTAAATGTTGCCACTaGCAGCAGAGCGAGGTAAGC +
Preference number: 3 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCLKCCH*QQSEVS
Trigger: GCTTACCTCGCTCTGCTGCAAGTGGCAACATTTAAG...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAACTCAAACTCTGGCTGTaGTTCTTTCTCTGTGGAATC +
Preference number: 3 (lower is better)
Translates to: ADNSEERRRERNVLLIFQLKLWL*FFLCGI
Trigger: GATTCCACAGAGAAAGAACAACAGCCAGAGTTTGAG...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTAGTACGCAGGGTCTGTaGATAAAGCTTCTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: HCKESGVVNEARFPSHFGSTQGL*IKLLPG
Trigger: TCCTGGGAGAAGCTTTATCAACAGACCCTGCGTACT...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTCTGCAGCTACATTCTaGTTCTGCTCCTCATATGCC +
Preference number: 3 (lower is better)
Translates to: SLHCKESGVVNEARFPSHSAATF*FCSSYA
Trigger: GGCATATGAGGAGCAGAACAAGAATGTAGCTGCAGA...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCTGGGACAGTCGTTaGGTTTGCTCTAGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNFWDSR*VCSRSC
Trigger: ACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGAA...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATGAGTTTTGGACTCTTTaGGGAATTGAAGCTACGGCC +
Preference number: 3 (lower is better)
Translates to: SLHCKESGVVNEARFPSHEFWTL*GIEATA
Trigger: GGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACTC...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTGACTCTGGATTCACTTaGGAAAACCAGTTCATACCC +
Preference number: 3 (lower is better)
Translates to: TSLHCKESGVVNEARFPSDSGFT*ENQFIP
Trigger: GGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTC...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp GACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGGTTTTCCAAGTCATTTaGGTCACCTTGGTCACCCTT +
Preference number: 3 (lower is better)
Translates to: DHKDPVEMVKDGFHGFGLVFQVI*VTLVTL
Trigger: AAGGGTGACCAAGGTGACCAAAATGACTTGGAAAAC...CAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCCTAGACAAGTCTCCATaGCAAAGAGTCTGGAGTGGT +
Preference number: 3 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVLDKSP*QRVWSG
Trigger: ACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAG...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCATTCTTGGATTTTGGGTaGGTTCTCAAGGTGAACATC +
Preference number: 3 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSFLDFG*VLKVNI
Trigger: GATGTTCACCTTGAGAACCAACCCAAAATCCAAGAA...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCTCATTGCTAAAGGAATaGAGCAGTAAGGCAATGAAG +
Preference number: 3 (lower is better)
Translates to: FHTLNSLARGLLVLLMELSLLKE*SSKAMK
Trigger: CTTCATTGCCTTACTGCTCAATTCCTTTAGCAATGA...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR TCA 72 bp AAGAGTTACATGATTCTTTTGATCGCAGCATGGGGCTaGGCAGGGAATCCCAACCTGCTGATGTGCTTATCT +
Preference number: 3 (lower is better)
Translates to: KSYMILLIAAWG*AGNPNLLMCLS
Trigger: AGATAAGCACATCAGCAGGTTGGGATTCCCTGCTCAGCCCCATGCTGCGATCAAAAGAATCATGTAACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR TCA 72 bp GGAGCTCATAGGCCTGTTGTTCAGGCTCAGGTTGTGTaGTGCGCTGTGCATTATCTTCACCAGAAAATTCAA +
Preference number: 3 (lower is better)
Translates to: GAHRPVVQAQVV*CAVHYLHQKIQ
Trigger: TTGAATTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGGCCTATGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR GCA 72 bp CAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTaGTTTTTGGGAACCATCTCAGGTAACCATCCAAAG +
Preference number: 3 (lower is better)
Translates to: QQPKPLGKHLSG*FLGTISGNHPK
Trigger: CTTTGGATGGTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR GCA 72 bp CTGCCACCTCTTTTTGCTGTGGTAAGTTTTGCTTCCTaGACCACTTGTGACAGAAATGCTCAAGAGTGTGTC +
Preference number: 3 (lower is better)
Translates to: LPPLFAVVSFAS*TTCDRNAQECV
Trigger: GACACACTCTTGAGCATTTCTGTCACAAGTGGTGCAGGAAGCAAAACTTACCACAGCAAAAAGAGGTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR GCA 72 bp GGCCTGTTGTTCAGGCTCAGGTTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAATTCAACGTCATCTTC +
Preference number: 3 (lower is better)
Translates to: GLLFRLRLCDAL*IIFTRKFNVIF
Trigger: GAAGATGACGTTGAATTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCAACAGCAATGTACATGTaGACAACAATGAGAAAGGAG +
Preference number: 3 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSTAMYM*TTMRKE
Trigger: CTCCTTTCTCATTGTTGTCAACATGTACATTGCTGT...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp CCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCATTCTTCAGTGGCTGTATaGAAGTTCTCTAAAATCACA +
Preference number: 3 (lower is better)
Translates to: PHFELSGSWASCSPDGAHSSVAV*KFSKIT
Trigger: TGTGATTTTAGAGAACTTCAATACAGCCACTGAAGA...ATGAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATATTTATTTGGCTTaGCGACACGCAAAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: TCQFPHFELSGSWASCSPDIYLA*RHAKAQ
Trigger: CTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTAACTTCTTGAGAGGATaGGCTTCCATGAACTTCTCT +
Preference number: 3 (lower is better)
Translates to: TSLHCKESGVVNEARFPSNFLRG*ASMNFS
Trigger: AGAGAAGTTCATGGAAGCCAATCCTCTCAAGAAGTT...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAGGTTCATACAACTTCTaGAGAGGATTGGCTTCCATG +
Preference number: 3 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQGSYNF*RGLASM
Trigger: CATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACC...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGTCAATTTCCACACTTaGAACTCTCTGGCTCGTGGG +
Preference number: 3 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTVNFHT*NSLARG
Trigger: CCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGAC...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp AAAGATGACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTCTTAAATGTTGCCACTaGCAGCAGAGCGAGGTAAGC +
Preference number: 3 (lower is better)
Translates to: KDDHKDPVEMVKDGFHGFLKCCH*QQSEVS
Trigger: GCTTACCTCGCTCTGCTGCAAGTGGCAACATTTAAG...AAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CCA 72 bp TTTTGGCAATCTTCATCAGAATCTGACCCAGGAGGCTaGTCTTTCCCAGACTCTCTCAAAAAGAAGGACTTC +
Preference number: 3 (lower is better)
Translates to: FWQSSSESDPGG*SFPDSLKKKDF
Trigger: GAAGTCCTTCTTTTTGAGAGAGTCTGGGAAAGACCAGCCTCCTGGGTCAGATTCTGATGAAGATTGCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 72 bp CTTGAAGACCCTGAGCACTCTGAAGGAACGCAAGAATaGCCAGCTTCTCTTTTGAAGTACACAGTTCATTAC +
Preference number: 3 (lower is better)
Translates to: LEDPEHSEGTQE*PASLLKYTVHY
Trigger: GTAATGAACTGTGTACTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTCAGAGTGCTCAGGGTCTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CCA 72 bp AAACAAAAAGCCCGGCGGAATCGATCCAGTGCTAACTaGACTTTAGTTTTCCTGGCCTCTCCTTCTAAGTTT +
Preference number: 3 (lower is better)
Translates to: KQKARRNRSSAN*TLVFLASPSKF
Trigger: AAACTTAGAAGGAGAGGCCAGGAAAACTAAAGTCCAGTTAGCACTGGATCGATTCCGCCGGGCTTTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACAACTTCTTGAGAGGATaGGCTTCCATGAACTTCTCT +
Preference number: 3 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNNFLRG*ASMNFS
Trigger: AGAGAAGTTCATGGAAGCCAATCCTCTCAAGAAGTT...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCCTTTCGAAAGGCCTTTaGAATAATAGCAGCACCTCT +
Preference number: 3 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVLSKGL*NNSSTS
Trigger: AGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAAG...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR TCA 72 bp ATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTaGTTTTCCAAGGTAGAAATCATTGTACCTTTAGGC +
Preference number: 3 (lower is better)
Translates to: ILKSVGGKGMCS*FSKVEIIVPLG
Trigger: GCCTAAAGGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675223.1
3UTR TCA 72 bp ACATCAGACTTCTTTCGGGGATCCTGTATGGTCAGATaGGGCTCATCTTCAGAGAACATGTCAATTTCCACA +
Preference number: 3 (lower is better)
Translates to: TSDFFRGSCMVR*GSSSENMSIST
Trigger: TGTGGAAATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGAAGTCTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CCA 72 bp TCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATaGTCAAGGATGGATTTCATGGCTTTGGGTTGGTTG +
Preference number: 3 (lower is better)
Translates to: SNVKMTTKTQLR*SRMDFMALGWL
Trigger: CAACCAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTAGTAGAAGACCAATGTaGAACAGAGAAGGAAGCGAC +
Preference number: 3 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPSRRPM*NREGSD
Trigger: GTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTACT...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGACTCTGGATTCACTTaGGAAAACCAGTTCATACCC +
Preference number: 3 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIDSGFT*ENQFIP
Trigger: GGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTC...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCAACTTCTTGAGAGGATaGGCTTCCATGAACTTCTCT +
Preference number: 3 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFNFLRG*ASMNFS
Trigger: AGAGAAGTTCATGGAAGCCAATCCTCTCAAGAAGTT...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAGGTTCATACAACTTCTaGAGAGGATTGGCTTCCATG +
Preference number: 3 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKGSYNF*RGLASM
Trigger: CATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACC...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATCAAACATCTCTCTGGTaGCTTTTTGGGAACCATCTC +
Preference number: 3 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDQTSLW*LFGNHL
Trigger: GAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTTG...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTATGGATTTCATGGCTTaGGGTTGGTTGTATGATTCA +
Preference number: 3 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCMDFMA*GWLYDS
Trigger: TGAATCATACAACCAACCCAAAGCCATGAAATCCAT...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp CTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATGTGCTTACATTCATATaGTATGGAACAGGCACTGTT +
Preference number: 3 (lower is better)
Translates to: LSGILYGQMRLIFREHVNVLTFI*YGTGTV
Trigger: AACAGTGCCTGTTCCATACAATATGAATGTAAGCAC...ATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR TCA 72 bp CTGCGTGTGATTAGGAAAAATATACTGATTAGAGAATaGGGCTGGTTGGTAAGCGGGGTCAAAGAATCTGAG +
Preference number: 3 (lower is better)
Translates to: LRVIRKNILIRE*GWLVSGVKESE
Trigger: CTCAGATTCTTTGACCCCGCTTACCAACCAGCCTCATTCTCTAATCAGTATATTTTTCCTAATCACACGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR TCA 72 bp TTGGGAACCATCTCAGGTAACCATCCAAAGCCATCCTaGAGATCAATGGTGCTACATTCTGATAGTATACTG +
Preference number: 3 (lower is better)
Translates to: LGTISGNHPKPS*RSMVLHSDSIL
Trigger: CAGTATACTATCAGAATGTAGCACCATTGATCTTCAGGATGGCTTTGGATGGTTACCTGAGATGGTTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTTCTTCAGTGGCTGTATaGAAGTTCTCTAAAATCACA +
Preference number: 3 (lower is better)
Translates to: HCKESGVVNEARFPSHFGSSVAV*KFSKIT
Trigger: TGTGATTTTAGAGAACTTCAATACAGCCACTGAAGA...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTTCAGTATTGTTACTGTaGCTGTTTTTAGCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: FLSLGGGDYGFIQLLERISVLLL*LFLAGP
Trigger: AGGGCCTGCTAAAAACAGCAACAGTAACAATACTGA...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR TCA 72 bp TTTAGTAATTCTTGGATTTTGGGTTGGTTCTCAAGGTaGACATCTTCAAATATCAGTGCCCCACTGCTCAGC +
Preference number: 3 (lower is better)
Translates to: FSNSWILGWFSR*TSSNISAPLLS
Trigger: GCTGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAAGAATTACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR TCA 72 bp ATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTaGTTTTCCAAGGTAGAAATCATTGTACTAACAATG +
Preference number: 3 (lower is better)
Translates to: ILKSVGGKGMCS*FSKVEIIVLTM
Trigger: CATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp ATTTTGATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATGGGTTTTCCAAGTCATTTaGGTCACCTTGGTCACCCTT +
Preference number: 3 (lower is better)
Translates to: ILMRHSNVKMTTKTQLRWVFQVI*VTLVTL
Trigger: AAGGGTGACCAAGGTGACCAAAATGACTTGGAAAAC...CCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCATCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp ATTTTGATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATGGCTTTCGAAAGGCCTTTaGAATAATAGCAGCACCTCT +
Preference number: 3 (lower is better)
Translates to: ILMRHSNVKMTTKTQLRWLSKGL*NNSSTS
Trigger: AGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAAG...CCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCATCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR TCA 72 bp CACACTATGAACTGTAGCATATTTGTTGTTGTTCTCTaGAACATCTGCAATGCTGCAGTAGCATTAGGAACC +
Preference number: 3 (lower is better)
Translates to: HTMNCSIFVVVL*NICNAAVALGT
Trigger: GGTTCCTAATGCTACTGCAGCATTGCAGATGTTTCAGAGAACAACAACAAATATGCTACAGTTCATAGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR GCA 72 bp ACAATAACACACAATGATGATGATGCATTCGCTTCTTaGATACATTCCCACATATTTTCGATCCATTCCCCG +
Preference number: 3 (lower is better)
Translates to: TITHNDDDAFAS*IHSHIFSIHSP
Trigger: CGGGGAATGGATCGAAAATATGTGGGAATGTATGCAAGAAGCGAATGCATCATCATCATTGTGTGTTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR-3UTR CAA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGATGGCTTTGGGTTGGTaGTATGATTCAGCCATCATG +
Preference number: 3 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKMALGW*YDSAIM
Trigger: CATGATGGCTGAATCATACAACCAACCCAAAGCCAT...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR-3UTR CAA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTTTCAGAAAGTACACTaGGCCCAGTTTTCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: QCCSSIRNQNILIQYICLFQKVH*AQFSAL
Trigger: CAAAGCAGAAAACTGGGCCAAGTGTACTTTCTGAAA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR GCA 72 bp CATATTTGTTGTTGTTCTCTGAAACATCTGCAATGCTaGAGTAGCATTAGGAACCAAAATATCTTGATCCAA +
Preference number: 3 (lower is better)
Translates to: HICCCSLKHLQC*SSIRNQNILIQ
Trigger: TTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTGCAGATGTTTCAGAGAACAACAACAAATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAACTGGCCTCCATCTTGTaGTGCTCCATGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQLASIL*CSMAKK
Trigger: CTTCTTGGCCATGGAGCATCACAAGATGGAGGCCAG...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAAAGGCATGCTTGGCACTaGAGCGGTAGATTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQRHAWH*SGRLSS
Trigger: AGAGGACAATCTACCGCTTCAGTGCCAAGCATGCCT...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCACCACTAGGAAGGAGTaGCAGAAATCCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: VLIPRAARTSLRIRPIRATTRKE*QKSPMC
Trigger: GCACATGGGGGATTTCTGGCACTCCTTCCTAGTGGT...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCCCAGCCCTTAAATGTTaGCACTTGCAGCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: VLIPRAARTSLRIRPIRAPALKC*HLQQSE
Trigger: CTCGCTCTGCTGCAAGTGGCAACATTTAAGGGCTGG...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCTTCCTCCTCCGCAAGTaGTGCCAACCAAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: VLIPRAARTSLRIRPIRAFLLRK*CQPSPI
Trigger: GATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAA...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCTTGCTTTCAAAGCTCTaGACACACGGAAGGTACGCA +
Preference number: 4 (lower is better)
Translates to: VLIPRAARTSLRIRPIRALLSKL*THGRYA
Trigger: TGCGTACCTTCCGTGTGTTCAGAGCTTTGAAAGCAA...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCTTCCTGCACCACTTGTaGCAGAAATGCTCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: VLIPRAARTSLRIRPIRAFLHHL*QKCSRV
Trigger: CACTCTTGAGCATTTCTGTCACAAGTGGTGCAGGAA...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAAGACAGTCGTTTGGTTTaGTCTAGGAGCTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQDSRLV*SRSCGF
Trigger: AAAGCCACAGCTCCTAGAGCAAACCAAACGACTGTC...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR CAA 72 bp CACAGCCACTGGGGGCAACAGTTCCACACGAGGTACTaGGATGCCAGGTTTTCTCCACAAGGGAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: HSHWGQQFHTRY*DARFSPQGRQG
Trigger: GCCTTGTCTCCCTTGTGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGGCAAGGCCCCCACGATaGCCTTCAGACGTGAAACTA +
Preference number: 4 (lower is better)
Translates to: AFILSRPSEPPSTLAVKAARPPR*PSDVKL
Trigger: TAGTTTCACGTCTGAAGGTCATCGTGGGGGCCTTGC...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCAATCATGCCTGACGCCCAGGGTTCAGACTTCCCATaGAGAGCTGCTGACCTACCA +
Preference number: 4 (lower is better)
Translates to: IFLLRKWCQPSPIMPDAQGSDFP*RAADLP
Trigger: TGGTAGGTCAGCAGCTCTTCATGGGAAGTCTGAACC...CTGGGCGTCAGGCATGATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCGACTCTTTTGGGAATTaGAGCTACGGCCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VLIPRAARTSLRIRPIRADSFGN*SYGQKA
Trigger: AGCTTTTTGGCCGTAGCTTCAATTCCCAAAAGAGTC...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAAGTAGAAGACCAATGTTaGACAGAGAAGGAAGCGACA +
Preference number: 4 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQVEDQC*TEKEAT
Trigger: TGTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTAC...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp ATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCAATCATGCCTGACGCCCAGGCACTCAGTGCTCTCTaGCTTTGGAGAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: IFLLRKWCQPSPIMPDAQALSAL*LWRGSP
Trigger: TGGAGATCCTCTCCAAAGGCAGAGAGCACTGAGTGC...CTGGGCGTCAGGCATGATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR GCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCCGAAAAGAATATCCATaGAGTGGAGGCGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLIPRAARTSLRIRPIRARKEYP*SGGDLH
Trigger: GTGAAGATCGCCTCCACTGCATGGATATTCTTTTCG...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGCCTTTAGGTCAAGCTaGGGCCGAGGCTGGGGTACT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGAFRSS*GRGWGT
Trigger: AGTACCCCAGCCTCGGCCTCAGCTTGACCTAAAGGC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAATTCTTCCTGTATGGTCAGATaGGGCTCATCTTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: CSPDKPQDSANPSQADNSSCMVR*GSSSEN
Trigger: GTTCTCTGAAGATGAGCCTCATCTGACCATACAGGA...AGAATTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCCCAAGCGGACAATTCTaGAGAGCGTCGGAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAIPSGQF*RASEGK
Trigger: CTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTGG...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTGTCTGGAGTGGTGAATaGGGCCCGTTTTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPVWSGE*GPFSKS
Trigger: TGACTTGGAAAACGGGCCTCATTCACCACTCCAGAC...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAATTCTCCCAACCTGCTGATGTaGTTATCTGGAAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: CSPDKPQDSANPSQADNSPNLLM*LSGRDR
Trigger: TCTGTCTCTTCCAGATAAGCACATCAGCAGGTTGGG...AGAATTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTCTGACCCAGGAGGCTaGTCTTTCCCAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: LALGHPKARQVSIAKSLESDPGG*SFPDSL
Trigger: GAGAGAGTCTGGGAAAGACCAGCCTCCTGGGTCAGA...CTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCATTAACGCACAGCCACTaGGGGCAACAGTTCCACACG +
Preference number: 4 (lower is better)
Translates to: AIRATEYPSGEGEKNIHALTHSH*GQQFHT
Trigger: CGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAA...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTATACCAAGCTCCTCCTaGGTCTCTGAGCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPIPSSS*VSEPLF
Trigger: GAAAAGGGGCTCAGAGACCCAGGAGGAGCTTGGTAT...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCCAGAGAGTCGGAAGTaGAGGGGCGGAAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILPESRK*RGGNSA
Trigger: AGCGGAATTTCCGCCCCTTCACTTCCGACTCTCTGG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCACCAGAGAGTCGGAAGTaGAGGGGCGGAAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSPESRK*RGGNSA
Trigger: AGCGGAATTTCCGCCCCTTCACTTCCGACTCTCTGG...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCCAGAGAGTCGGAAGTaGAGGGGCGGAAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTPESRK*RGGNSA
Trigger: AGCGGAATTTCCGCCCCTTCACTTCCGACTCTCTGG...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAAAGTCCAATCATGCCTaGCGCCCAGGGTCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: AIRATEYPSGEGEKNIHAKSNHA*RPGSLV
Trigger: TACCAAAGACCCTGGGCGTCAGGCATGATTGGACTT...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGTCGAACACGAGACCTTaGCATTTGTTCAGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: AFILSRPSEPPSTLAVKASNTRP*HLFRGR
Trigger: ACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGA...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGATCGCAGCATGGGGCTaGGCAGGGAATCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: DHKDPVEMVKDGFHGFGLIAAWG*AGNPNL
Trigger: CAGGTTGGGATTCCCTGCTCAGCCCCATGCTGCGAT...CAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAGAGTCTGGAGTGGTaGATGAGGCCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: AFILSRPSEPPSTLAVKAKSLEW*MRPVFQ
Trigger: TTGGAAAACGGGCCTCATTCACCACTCCAGACTCTT...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCTACAAAAGCTGAGCTaGGGTCAGGGGCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILLQKLS*GQGPWE
Trigger: CTCCCAAGGCCCCTGACCTCAGCTCAGCTTTTGTAG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGCCTTGTATAGGGGTTaGAAGGGGGCACAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGALYRG*KGAQQC
Trigger: GCACTGCTGTGCCCCCTTTCAACCCCTATACAAGGC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAATTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQLCDAL*IIFTRK
Trigger: TTTTCTGGTGAAGATAATGCACAGCGCATCACACAA...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATAGTCCTGATTCCTCGTaGAGCCCGGACAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHSPDSS*SPDKPQ
Trigger: CTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGACT...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAAGTCCTGATTCCTCGTaGAGCCCGGACAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ADNSEERRRERNVLLIFQSPDSS*SPDKPQ
Trigger: CTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGACT...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAGTGCTCTCTGCCTTTaGAGAGGATCTCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: AFILSRPSEPPSTLAVKASALCL*RGSPCS
Trigger: TGAGCATGGAGATCCTCTCCAAAGGCAGAGAGCACT...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTAGTGCTCTCTGCCTTTaGAGAGGATCTCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPSALCL*RGSPCS
Trigger: TGAGCATGGAGATCCTCTCCAAAGGCAGAGAGCACT...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGCTATGCCAGGGAGGTaGCAGTTTTCTGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AIRATEYPSGEGEKNIHAAMPGR*QFSEEE
Trigger: CTCTTCCTCAGAAAACTGCCACCTCCCTGGCATAGC...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCGCTATGCCAGGGAGGTaGCAGTTTTCTGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAIAMPGR*QFSEEE
Trigger: CTCTTCCTCAGAAAACTGCCACCTCCCTGGCATAGC...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCGATTCCTGGAATATATaGCACAATCGCTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: VLIPRAARTSLRIRPIRADSWNI*HNRYSN
Trigger: ATTGGAATAGCGATTGTGTCATATATTCCAGGAATC...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCTGGCCTCCATCTTGTaGTGCTCCATGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGLASIL*CSMAKK
Trigger: CTTCTTGGCCATGGAGCATCACAAGATGGAGGCCAG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCTCCTCCTGGGTCTCTaGGCCCCTTTTCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGLLLGL*APFHLH
Trigger: ATGGAGATGAAAAGGGGCTCAGAGACCCAGGAGGAG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATCTCCTCCTGGGTCTCTaGGCCCCTTTTCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHLLLGL*APFHLH
Trigger: ATGGAGATGAAAAGGGGCTCAGAGACCCAGGAGGAG...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCATCGCAGCATGGGGCTaGGCAGGGAATCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVIAAWG*AGNPNL
Trigger: CAGGTTGGGATTCCCTGCTCAGCCCCATGCTGCGAT...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCACAGTTCATTACATCTaGAAAACTCAGAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: VLIPRAARTSLRIRPIRATVHYI*KTQKSN
Trigger: GTTGCTCTTCTGAGTTTTGCAGATGTAATGAACTGT...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCTCCCCCATGTGCCAGTaGCGTAAACATGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: FHTLNSLARGLLVLLMELSPMCQ*RKHETV
Trigger: GACAGTCTCATGTTTACGGCACTGGCACATGGGGGA...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGCCAGCCCTTAAATGTTaGCACTTGCAGCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: LACDYVEHETLTFVQRPWPALKC*HLQQSE
Trigger: CTCGCTCTGCTGCAAGTGGCAACATTTAAGGGCTGG...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCCCAACCTGCTGATGTaGTTATCTGGAAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPPNLLM*LSGRDR
Trigger: TCTGTCTCTTCCAGATAAGCACATCAGCAGGTTGGG...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGAAAGCAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTTGGGAAGTCACAGTGGACCTTaGCCTTGGCCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GKQQPKPLGKHLSGCFLGSHSGP*PWPPQS
Trigger: GCTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACT...TCCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTGCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAATTCTGGAGCTCATAGGCCTTaGATTAGAAATAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: CSPDKPQDSANPSQADNSGAHRP*IRNNGD
Trigger: GTCTCCATTATTTCTAATGCAAGGCCTATGAGCTCC...AGAATTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675672.1
CDS-3UTR CCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGTCGCCATAGAGCTTaGGCAACTTCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGECRHRA*ATSWRP
Trigger: AGGCCTCCAGGAAGTTGCCCAAGCTCTATGGCGACA...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTTCTGACCCAGGAGGCTaGTCTTTCCCAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTSDPGG*SFPDSL
Trigger: GAGAGAGTCTGGGAAAGACCAGCCTCCTGGGTCAGA...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTCCACACGAGGTACTTaGATGCCAGGTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVSTRGT*MPGFLH
Trigger: GTGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGA...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGTTCGGGGATCCTGTATaGTCAGATGAGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: AFILSRPSEPPSTLAVKAFGDPV*SDEAHL
Trigger: AAGATGAGCCTCATCTGACCATACAGGATCCCCGAA...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGGTCCACGCTACAGCATaGAAAGCAGCAACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LACDYVEHETLTFVQRPWVHATA*KAATKA
Trigger: GGCTTTGGTTGCTGCTTTCCATGCTGTAGCGTGGAC...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAAGTAATTCTTGGATTTTaGGTTGGTTCTCAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQVILGF*VGSQGE
Trigger: TTCACCTTGAGAACCAACCCAAAATCCAAGAATTAC...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTAGAATATCCATGCAGTaGAGGCGATCTTCACTCACC +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPRISMQ*RRSSLT
Trigger: GGTGAGTGAAGATCGCCTCCACTGCATGGATATTCT...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATGCAAGGCCCCCACGATaGCCTTCAGACGTGAAACTA +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHARPPR*PSDVKL
Trigger: TAGTTTCACGTCTGAAGGTCATCGTGGGGGCCTTGC...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAATGAAGAAGAAGACTaGGTAGAGCCCAGTAGTACG +
Preference number: 4 (lower is better)
Translates to: AFILSRPSEPPSTLAVKANEEED*VEPSST
Trigger: CGTACTACTGGGCTCTACTCAGTCTTCTTCTTCATT...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCTCCTCCTGGGTCTCTaGGCCCCTTTTCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: TSLHCKESGVVNEARFPSLLLGL*APFHLH
Trigger: ATGGAGATGAAAAGGGGCTCAGAGACCCAGGAGGAG...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTAAGTCCAATCATGCCTaGCGCCCAGGGTCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGKSNHA*RPGSLV
Trigger: TACCAAAGACCCTGGGCGTCAGGCATGATTGGACTT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCCAGGCTCAGGTTGTGTaGTGCGCTGTGCATTATCTT +
Preference number: 4 (lower is better)
Translates to: FHTLNSLARGLLVLLMELQAQVV*CAVHYL
Trigger: AAGATAATGCACAGCGCATCACACAACCTGAGCCTG...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCTCGAACACGAGACCTTaGCATTTGTTCAGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: FHTLNSLARGLLVLLMELSNTRP*HLFRGR
Trigger: ACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGA...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCCAAAGAGGAGAGTCCTaGTTCCTCGTGCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVQRGES*FLVQPG
Trigger: TCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTG...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTAGGATCTACAAAAGCTaGGCTGAGGTCAGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGRIYKS*AEVRGL
Trigger: AAGGCCCCTGACCTCAGCTCAGCTTTTGTAGATCCT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCAATCCGCTTCTCAATTaGAGCCAGAGAGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAINPLLN*SQRVGS
Trigger: ACTTCCGACTCTCTGGCTGCAATTGAGAAGCGGATT...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTGCACTCAGTGCTCTCTaGCTTTGGAGAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTALSAL*LWRGSP
Trigger: TGGAGATCCTCTCCAAAGGCAGAGAGCACTGAGTGC...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATGCACTCAGTGCTCTCTaGCTTTGGAGAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHALSAL*LWRGSP
Trigger: TGGAGATCCTCTCCAAAGGCAGAGAGCACTGAGTGC...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGCACGAGGTACTTGGATaGCAGGTTTTCTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: LACDYVEHETLTFVQRPWHEVLG*QVFSTR
Trigger: CCTTGTGGAGAAAACCTGGCATCCAAGTACCTCGTG...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGTCCCCCATGTGCCAGTaGCGTAAACATGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILSPMCQ*RKHETV
Trigger: GACAGTCTCATGTTTACGGCACTGGCACATGGGGGA...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGACCACTAGGAAGGAGTaGCAGAAATCCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILTTRKE*QKSPMC
Trigger: GCACATGGGGGATTTCTGGCACTCCTTCCTAGTGGT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAACCACTAGGAAGGAGTaGCAGAAATCCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: ADNSEERRRERNVLLIFQTTRKE*QKSPMC
Trigger: GCACATGGGGGATTTCTGGCACTCCTTCCTAGTGGT...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTATTCCCCGCAGAGGATaGGGAATACCACTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGIPRRG*GIPLGR
Trigger: CCTTCCTAGTGGTATTCCGCATCCTCTGCGGGGAAT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAATTCCCCGCAGAGGATaGGGAATACCACTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ADNSEERRRERNVLLIFQIPRRG*GIPLGR
Trigger: CCTTCCTAGTGGTATTCCGCATCCTCTGCGGGGAAT...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGATGTCTTTGCTTTGTaGAGCACAGCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGDVFAL*STASCH
Trigger: GTGGCAGGAGGCTGTGCTGCACAAAGCAAAGACATC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCGATGTCTTTGCTTTGTaGAGCACAGCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QADNSEERRRERNVLLIFDVFAL*STASCH
Trigger: GTGGCAGGAGGCTGTGCTGCACAAAGCAAAGACATC...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCTCCTCCGCAAGTGGTaGCAACCAAGTCCAATCATG +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGLLRKW*QPSPIM
Trigger: CATGATTGGACTTGGTTGGCACCACTTGCGGAGGAG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCTCCTCCGCAAGTGGTaGCAACCAAGTCCAATCATG +
Preference number: 4 (lower is better)
Translates to: QADNSEERRRERNVLLIFLLRKW*QPSPIM
Trigger: CATGATTGGACTTGGTTGGCACCACTTGCGGAGGAG...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTAGTCCTGATTCCTCGTaGAGCCCGGACAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCSPDSS*SPDKPQ
Trigger: CTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGACT...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCCCCAACCTGCTGATGTaGTTATCTGGAAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVPNLLM*LSGRDR
Trigger: TCTGTCTCTTCCAGATAAGCACATCAGCAGGTTGGG...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAAGCTTGGGCAACTTCCTaGAGGCCTTTAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEAWATS*RPLGQA
Trigger: AGCTTGACCTAAAGGCCTCCAGGAAGTTGCCCAAGC...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGTCCAGTGATAGATTCTaGGACAGTCGTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: AFILSRPSEPPSTLAVKASSDRF*DSRLVC
Trigger: GCAAACCAAACGACTGTCCCAGAATCTATCACTGGA...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTGAAGGAACGCAAGAATaGCCAGCTTCTCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPEGTQE*PASLLK
Trigger: CTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTC...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGATACCAAGCTCCTCCTaGGTCTCTGAGCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILIPSSS*VSEPLF
Trigger: GAAAAGGGGCTCAGAGACCCAGGAGGAGCTTGGTAT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCATTCGGGGATCCTGTATaGTCAGATGAGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: AIRATEYPSGEGEKNIHAFGDPV*SDEAHL
Trigger: AAGATGAGCCTCATCTGACCATACAGGATCCCCGAA...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCGGGGATCCTGTATaGTCAGATGAGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAIFGDPV*SDEAHL
Trigger: AAGATGAGCCTCATCTGACCATACAGGATCCCCGAA...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR CAA 72 bp TGTCGGGCCTGTCGGGTTACAGAGTTTTGGACTCTTTaGGGAATTGAAGCTACGGCCAAAAAGCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: CRACRVTEFWTL*GIEATAKKLHA
Trigger: GGCATGCAGCTTTTTGGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACTCTGTAACCCGACAGGCCCGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp TTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTTCCAGAGAGTCGGAAGTaGAGGGGCGGAAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: FGDPVWSDEAHLQRTCQFPESRK*RGGNSA
Trigger: AGCGGAATTTCCGCCCCTTCACTTCCGACTCTCTGG...AAATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCCAGAGGCTTTCCTATaGGCTCACGAGGAATGTCGC +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSPEAFL*AHEECR
Trigger: GCGACATTCCTCGTGAGCTCATAGGAAAGCCTCTGG...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTAGGCATGCTTGGCACTaGAGCGGTAGATTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TSLHCKESGVVNEARFPSRHAWH*SGRLSS
Trigger: AGAGGACAATCTACCGCTTCAGTGCCAAGCATGCCT...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CACCAGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCCAATCGCTATTCCAATaGCAATGGAGTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HQKIQRHLPPPQVVPTKSQSLFQ*QWSPAS
Trigger: ACTGGCTGGACTCCATTGTCATTGGAATAGCGATTG...GGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGGGTTCAGACTTCCCATaGAGAGCTGCTGACCTACCA +
Preference number: 4 (lower is better)
Translates to: IYLALRHAKAQARHQQSQGSDFP*RAADLP
Trigger: TGGTAGGTCAGCAGCTCTTCATGGGAAGTCTGAACC...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGAAGTCCAATCATGCCTaGCGCCCAGGGTCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: DHKDPVEMVKDGFHGFGLKSNHA*RPGSLV
Trigger: TACCAAAGACCCTGGGCGTCAGGCATGATTGGACTT...CAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCAGGCTCAGGTTGTGTaGTGCGCTGTGCATTATCTT +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILQAQVV*CAVHYL
Trigger: AAGATAATGCACAGCGCATCACACAACCTGAGCCTG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCAGGCTCAGGTTGTGTaGTGCGCTGTGCATTATCTT +
Preference number: 4 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTQAQVV*CAVHYL
Trigger: AAGATAATGCACAGCGCATCACACAACCTGAGCCTG...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTGCAGGTTCCACCAAATaGCCCAGGGAGGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HCKESGVVNEARFPSHFGAGSTK*PREAFS
Trigger: AGAGAAAGCCTCCCTGGGTCATTTGGTGGAACCTGC...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CACCAGAAAATTCAACGTCATCTTCCTCCTCCGCAAGTGGTGCCAACCAAGTCCAGCACCAGGCACTGGTaGAATACTTTCCAAATCCGA +
Preference number: 4 (lower is better)
Translates to: HQKIQRHLPPPQVVPTKSSTRHW*NTFQIR
Trigger: TCGGATTTGGAAAGTATTTCACCAGTGCCTGGTGCT...GGACTTGGTTGGCACCACTTGCGGAGGAGGAAGATGACGTTGAATTTTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACCCAAGCGGACAATTCTaGAGAGCGTCGGAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNPSGQF*RASEGK
Trigger: CTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTGG...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCCAAAGAGGAGAGTCCTaGTTCCTCGTGCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFQRGES*FLVQPG
Trigger: TCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTG...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATGGAATCCCAACCTGCTaGTGTGCTTATCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHGIPTC*CAYLEE
Trigger: CTCTTCCAGATAAGCACATCAGCAGGTTGGGATTCC...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATGTCTGGAGTGGTGAATaGGGCCCGTTTTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHVWSGE*GPFSKS
Trigger: TGACTTGGAAAACGGGCCTCATTCACCACTCCAGAC...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGGTCTGGAGTGGTGAATaGGGCCCGTTTTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: HVNFHTLNSLARGLLVLLVWSGE*GPFSKS
Trigger: TGACTTGGAAAACGGGCCTCATTCACCACTCCAGAC...CAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTGCTACATTCTTGTTCTaGTCCTCATATGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPATFLF*SSYAMV
Trigger: TACCATGGCATATGAGGAGCAGAACAAGAATGTAGC...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCAGAAATCCCCCATGTaGCAGTGCCGTAAACATGAG +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGQKSPM*QCRKHE
Trigger: CTCATGTTTACGGCACTGGCACATGGGGGATTTCTG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAAAACCAAGTCCAATCATaGCTGACGCCCAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGENQVQS*LTPRVF
Trigger: AAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTT...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATAACCAAGTCCAATCATaGCTGACGCCCAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHNQVQS*LTPRVF
Trigger: AAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTT...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATCTCCTCCGCAAGTGGTaGCAACCAAGTCCAATCATG +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHLLRKW*QPSPIM
Trigger: CATGATTGGACTTGGTTGGCACCACTTGCGGAGGAG...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CTGTTGCTGTTTTTAGCAGGCCCTGTAGCCATGAACACGCAGTTGATGATAACGCTCCTCCGCAAGTGGTaGCAACCAAGTCCAATCATG +
Preference number: 4 (lower is better)
Translates to: LLLFLAGPVAMNTQLMITLLRKW*QPSPIM
Trigger: CATGATTGGACTTGGTTGGCACCACTTGCGGAGGAG...CGTTATCATCAACTGCGTGTTCATGGCTACAGGGCCTGCTAAAAACAGCAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR GCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTTGTAACCGAGTGAATTaGTCTCAAACTCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPCNRVN*SQTLAV
Trigger: AACAGCCAGAGTTTGAGAGCAATTCACTCGGTTACA...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCAGTCACAGTGGACCTTaGCCTTGGCCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFSHSGP*PWPPQS
Trigger: GCTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACT...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTAACGCACAGCCACTGGGGGCAACAGTTCCACACGAGGTACTTGGATGCCAGGATCTGGAAAGATTACTaGGTAGCATCTGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: LTHSHWGQQFHTRYLDARIWKDY*VASVIH
Trigger: ATGGATGACAGATGCTACCCAGTAATCTTTCCAGAT...CCTGGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTTTCTCCCAGGAATCTTaGGTCATCAGCCGGAACATG +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGFSQES*VISRNM
Trigger: CATGTTCCGGCTGATGACCCAAGATTCCTGGGAGAA...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATTCTCCCAGGAATCTTaGGTCATCAGCCGGAACATG +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEFSQES*VISRNM
Trigger: CATGTTCCGGCTGATGACCCAAGATTCCTGGGAGAA...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGTCTGGGACAGTCGTTTaGTTTGCTCTAGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILSGTVV*FALGAV
Trigger: CACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGA...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGAGTGCTCTCTGCCTTTaGAGAGGATCTCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILSALCL*RGSPCS
Trigger: TGAGCATGGAGATCCTCTCCAAAGGCAGAGAGCACT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCTCCACACGAGGTACTTaGATGCCAGGTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QADNSEERRRERNVLLIFSTRGT*MPGFLH
Trigger: GTGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGA...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTAACGCACAGCCACTaGGGGCAACAGTTCCACACG +
Preference number: 4 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQLTHSH*GQQFHT
Trigger: CGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAA...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTAACGCACAGCCACTGGGGGCAACAGTTCCACACGAGGTACTTGGATGCCAGGCGGGTTACAGAGTTTTaGACTCTTTTGGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: LTHSHWGQQFHTRYLDARRVTEF*TLLGIE
Trigger: TTCAATTCCCAAAAGAGTCCAAAACTCTGTAACCCG...CCTGGCATCCAAGTACCTCGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTCCTCCTCCGCAAGTaGTGCCAACCAAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHFLLRK*CQPSPI
Trigger: GATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAA...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGAGCAACCAAAGCCTTTaGGCAAACATCTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LALGHPKARQVSIAKSLESNQSL*ANISLV
Trigger: AACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCT...CTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCAGCAACCAAAGCCTTTaGGCAAACATCTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVSNQSL*ANISLV
Trigger: AACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCT...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGGTCCACGCTACAGCATaGAAAGCAGCAACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HVNFHTLNSLARGLLVLLVHATA*KAATKA
Trigger: GGCTTTGGTTGCTGCTTTCCATGCTGTAGCGTGGAC...CAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCTTCATTCCTTCAAACTaGGACAGCGCACGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QADNSEERRRERNVLLIFFIPSN*DSARRG
Trigger: GCCTCTTCGTGCGCTGTCCCAGTTTGAAGGAATGAA...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGGCTGATGTGCTTATCTaGAAGAGACAGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: LACDYVEHETLTFVQRPWADVLI*KRQSML
Trigger: CAGCATGCTCTGTCTCTTCCAGATAAGCACATCAGC...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCGCTGATGTGCTTATCTaGAAGAGACAGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: FHTLNSLARGLLVLLMELADVLI*KRQSML
Trigger: CAGCATGCTCTGTCTCTTCCAGATAAGCACATCAGC...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTAAGCCCAATCTAGAGTaGGCCATGGGGCCTTGTATA +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGKPNLE*AMGPCI
Trigger: TATACAAGGCCCCATGGCCCACTCTAGATTGGGCTT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAAGGCATGCTTGGCACTaGAGCGGTAGATTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQRHAWH*SGRLSS
Trigger: AGAGGACAATCTACCGCTTCAGTGCCAAGCATGCCT...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCAATCGCTATTCCAATaGCAATGGAGTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILQSLFQ*QWSPAS
Trigger: ACTGGCTGGACTCCATTGTCATTGGAATAGCGATTG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCAATCGCTATTCCAATaGCAATGGAGTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTQSLFQ*QWSPAS
Trigger: ACTGGCTGGACTCCATTGTCATTGGAATAGCGATTG...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATTGCTTTCAAAGCTCTaGACACACGGAAGGTACGCA +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGELLSKL*THGRYA
Trigger: TGCGTACCTTCCGTGTGTTCAGAGCTTTGAAAGCAA...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCAGCAAGGCCCCCACGATaGCCTTCAGACGTGAAACTA +
Preference number: 4 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSARPPR*PSDVKL
Trigger: TAGTTTCACGTCTGAAGGTCATCGTGGGGGCCTTGC...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATGGTTCAGACTTCCCATaGAGAGCTGCTGACCTACCA +
Preference number: 4 (lower is better)
Translates to: LSGILYGQMRLIFREHVNGSDFP*RAADLP
Trigger: TGGTAGGTCAGCAGCTCTTCATGGGAAGTCTGAACC...ATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTATCTTCATCAGAATCTaGCCCAGGAGGCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGIFIRI*PRRLVF
Trigger: AAAGACCAGCCTCCTGGGTCAGATTCTGATGAAGAT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAAATCTTCATCAGAATCTaGCCCAGGAGGCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEIFIRI*PRRLVF
Trigger: AAAGACCAGCCTCCTGGGTCAGATTCTGATGAAGAT...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCAATCTTCATCAGAATCTaGCCCAGGAGGCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSIFIRI*PRRLVF
Trigger: AAAGACCAGCCTCCTGGGTCAGATTCTGATGAAGAT...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTTTCCTGCACCACTTGTaGCAGAAATGCTCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGFLHHL*QKCSRV
Trigger: CACTCTTGAGCATTTCTGTCACAAGTGGTGCAGGAA...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATTTCCTGCACCACTTGTaGCAGAAATGCTCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHFLHHL*QKCSRV
Trigger: CACTCTTGAGCATTTCTGTCACAAGTGGTGCAGGAA...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CACTCTGAAGGAACGCAAGAATGGCCAGCTTCTCTTTTGAAGTACACAGTTCATCTCCTCCTGGGTCTCTaGGCCCCTTTTCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: HSEGTQEWPASLLKYTVHLLLGL*APFHLH
Trigger: ATGGAGATGAAAAGGGGCTCAGAGACCCAGGAGGAG...ATGAACTGTGTACTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTCAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAATCCTGTATGGTCAGATaGGGCTCATCTTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ADNSEERRRERNVLLIFQSCMVR*GSSSEN
Trigger: GTTCTCTGAAGATGAGCCTCATCTGACCATACAGGA...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGAGCACCAGGCACTGGTaGAATACTTTCCAAATCCGA +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILSTRHW*NTFQIR
Trigger: TCGGATTTGGAAAGTATTTCACCAGTGCCTGGTGCT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTAGCACCAGGCACTGGTaGAATACTTTCCAAATCCGA +
Preference number: 4 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTSTRHW*NTFQIR
Trigger: TCGGATTTGGAAAGTATTTCACCAGTGCCTGGTGCT...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCAAAGATCTGGCTTGTaGCTATGTCGAACACGAGAC +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILQRSGL*LCRTRD
Trigger: GTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGTTTGGGTTGGTTGTATaGTTCAGCCATCATGCTAAT +
Preference number: 4 (lower is better)
Translates to: AFILSRPSEPPSTLAVKAFGLVV*FSHHAN
Trigger: ATTAGCATGATGGCTGAATCATACAACCAACCCAAA...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATCCACAAAGACCCAGTTaGGATGGTCAAGGATGGATT +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHPQRPS*DGQGWI
Trigger: AATCCATCCTTGACCATCTCAACTGGGTCTTTGTGG...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAACCACAAAGACCCAGTTaGGATGGTCAAGGATGGATT +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEPQRPS*DGQGWI
Trigger: AATCCATCCTTGACCATCTCAACTGGGTCTTTGTGG...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAACAAAGAGGAGAGTCCTaGTTCCTCGTGCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKQRGES*FLVQPG
Trigger: TCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTG...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACCTTTAGGATCGCAGCATGGGGCTaGGCAGGGAATCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: RERNVLLIFQGRNHCTFRIAAWG*AGNPNL
Trigger: CAGGTTGGGATTCCCTGCTCAGCCCCATGCTGCGAT...CCTAAAGGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675223.1
CDS-3UTR TCA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGTTCTCTTGGTGGTGGTaGCTATGGGTTCATACAACT +
Preference number: 4 (lower is better)
Translates to: LACDYVEHETLTFVQRPWFSWWW*LWVHTT
Trigger: AGTTGTATGAACCCATAGTCACCACCACCAAGAGAA...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGATACTGATTAGAGAATaGGGCTGGTTGGTAAGCGGG +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILILIRE*GWLVSG
Trigger: CCCGCTTACCAACCAGCCTCATTCTCTAATCAGTAT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCATTCCAAGGACTTCTaGGATCCAAACTCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPHSKDF*DPNSKS
Trigger: ACTTTTTGAGTTTGGATCTCAGAAGTCCTTGGAATG...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675223.1
CDS-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTAATCCGCTTCTCAATTaGAGCCAGAGAGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGNPLLN*SQRVGS
Trigger: ACTTCCGACTCTCTGGCTGCAATTGAGAAGCGGATT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAAAATCCGCTTCTCAATTaGAGCCAGAGAGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGENPLLN*SQRVGS
Trigger: ACTTCCGACTCTCTGGCTGCAATTGAGAAGCGGATT...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCGCTACATTCTTGTTCTaGTCCTCATATGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVATFLF*SSYAMV
Trigger: TACCATGGCATATGAGGAGCAGAACAAGAATGTAGC...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGACAGTCGTTTGGTTTaGTCTAGGAGCTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGDSRLV*SRSCGF
Trigger: AAAGCCACAGCTCCTAGAGCAAACCAAACGACTGTC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTGACAGTCGTTTGGTTTaGTCTAGGAGCTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTDSRLV*SRSCGF
Trigger: AAAGCCACAGCTCCTAGAGCAAACCAAACGACTGTC...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCATGGAGAGGATCTCCATaGTCATCAAAGTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSWRGSP*SSKWSS
Trigger: ACTGGACCACTTTGATGAGCATGGAGATCCTCTCCA...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTATTCCCCGCAGAGGATaGGGAATACCACTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCIPRRG*GIPLGR
Trigger: CCTTCCTAGTGGTATTCCGCATCCTCTGCGGGGAAT...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTGATGTCTTTGCTTTGTaGAGCACAGCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HCKESGVVNEARFPSHFGDVFAL*STASCH
Trigger: GTGGCAGGAGGCTGTGCTGCACAAAGCAAAGACATC...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AACATGAGACTGTCGGGCCTGTCGGGTTACAGAGTTTTGGACTCTTTTGGGAATAACCAAGTCCAATCATaGCTGACGCCCAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: NMRLSGLSGYRVLDSFGNNQVQS*LTPRVF
Trigger: AAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTT...ATTCCCAAAAGAGTCCAAAACTCTGTAACCCGACAGGCCCGACAGTCTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CCA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGTTCTTTTTCTCCTTTTaGATGGCAATCCGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AFILSRPSEPPSTLAVKAFFFSF*MAIRFS
Trigger: TGAGAAGCGGATTGCCATCCAAAAGGAGAAAAAGAA...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CATCTTCAGAGAACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTGCTTGGGCAACTTCCTaGAGGCCTTTAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: HLQRTCQFPHFELSGSWAAWATS*RPLGQA
Trigger: AGCTTGACCTAAAGGCCTCCAGGAAGTTGCCCAAGC...AGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGTTCTCTGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTATGCTGAACAATGAATaGACTGAGACTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPMLNNE*TETLMA
Trigger: AGCCATTAGAGTCTCAGTCCATTCATTGTTCAGCAT...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TGGAAAGCAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTTGGGTTCTCCCAGGAATCTTaGGTCATCAGCCGGAACATG +
Preference number: 4 (lower is better)
Translates to: WKAATKAFGQTSLWLLFGFSQES*VISRNM
Trigger: CATGTTCCGGCTGATGACCCAAGATTCCTGGGAGAA...CCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTGCTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTCTGGGACAGTCGTTTaGTTTGCTCTAGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHSGTVV*FALGAV
Trigger: CACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGA...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCACATCTTCTCAAAACTaGCCTCCATCTTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAITSSQN*PPSCDA
Trigger: AGCATCACAAGATGGAGGCCAGTTTTGAGAAGATGT...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGAGTTTTGGACTCTTTTaGGAATTGAAGCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: LALGHPKARQVSIAKSLESFGLF*ELKLRP
Trigger: TGGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACT...CTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCAGTTTTGGACTCTTTTaGGAATTGAAGCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVSFGLF*ELKLRP
Trigger: TGGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACT...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCGATCCAGTGCTAACTaGACTTTAGTTTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGRSSAN*TLVFLA
Trigger: GGCCAGGAAAACTAAAGTCCAGTTAGCACTGGATCG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCGATCCAGTGCTAACTaGACTTTAGTTTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTRSSAN*TLVFLA
Trigger: GGCCAGGAAAACTAAAGTCCAGTTAGCACTGGATCG...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATCGATCCAGTGCTAACTaGACTTTAGTTTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHRSSAN*TLVFLA
Trigger: GGCCAGGAAAACTAAAGTCCAGTTAGCACTGGATCG...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAATACCAAGCTCCTCCTaGGTCTCTGAGCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQIPSSS*VSEPLF
Trigger: GAAAAGGGGCTCAGAGACCCAGGAGGAGCTTGGTAT...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCGGGCAAACATCTCTCTaGTTGCTTTTTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: FHTLNSLARGLLVLLMELGQTSL*LLFGNH
Trigger: ATGGTTCCCAAAAAGCAACCAGAGAGATGTTTGCCC...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTTTGTTCAGAGGCCGTaGAATGGGTTTTTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVFVQRP*NGFLRF
Trigger: AAACCTCAAAAACCCATTCCACGGCCTCTGAACAAA...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCCAAGGATGGATTTCATaGCTTTGGGTTGGTTGTATG +
Preference number: 4 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVQGWIS*LWVGCM
Trigger: CATACAACCAACCCAAAGCCATGAAATCCATCCTTG...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGATCTTCACTCACCATaGGCAAGTCCATTACTAGAA +
Preference number: 4 (lower is better)
Translates to: AIRATEYPSGEGEKNIHADLHSP*ASPLLE
Trigger: TTCTAGTAATGGACTTGCCCATGGTGAGTGAAGATC...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGGATCTTCACTCACCATaGGCAAGTCCATTACTAGAA +
Preference number: 4 (lower is better)
Translates to: LALGHPKARQVSIAKSLEDLHSP*ASPLLE
Trigger: TTCTAGTAATGGACTTGCCCATGGTGAGTGAAGATC...CTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATAGAATATCCATGCAGTaGAGGCGATCTTCACTCACC +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHRISMQ*RRSSLT
Trigger: GGTGAGTGAAGATCGCCTCCACTGCATGGATATTCT...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR CAA 72 bp CCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTaGGGAACCATCTCAGGTAACCATCCAAAGCCATCC +
Preference number: 4 (lower is better)
Translates to: PKPLGKHLSGCF*GTISGNHPKPS
Trigger: GGATGGCTTTGGATGGTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CAA 72 bp CTGATGGAGCTCATAGGCCTGTTGTTCAGGCTCAGGTaGTGTGATGCGCTGTGCATTATCTTCACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LMELIGLLFRLR*CDALCIIFTRK
Trigger: TTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGGCCTATGAGCTCCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTCCAGAGGCTTTCCTATaGGCTCACGAGGAATGTCGC +
Preference number: 4 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIPEAFL*AHEECR
Trigger: GCGACATTCCTCGTGAGCTCATAGGAAAGCCTCTGG...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTGATTCCTGGAATATATaGCACAATCGCTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPDSWNI*HNRYSN
Trigger: ATTGGAATAGCGATTGTGTCATATATTCCAGGAATC...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGAAGCTTCCGGGTTACTaGTATTTTTACAGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILKLPGY*YFYSPS
Trigger: CGAGGGACTGTAAAAATATCAGTAACCCGGAAGCTT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGAATGAAGAAGAAGACTaGGTAGAGCCCAGTAGTACG +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILNEEED*VEPSST
Trigger: CGTACTACTGGGCTCTACTCAGTCTTCTTCTTCATT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGATCTTCATCAGAATCTaGCCCAGGAGGCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: IYLALRHAKAQARHQQSQIFIRI*PRRLVF
Trigger: AAAGACCAGCCTCCTGGGTCAGATTCTGATGAAGAT...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAACTGGCCTCCATCTTGTaGTGCTCCATGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKLASIL*CSMAKK
Trigger: CTTCTTGGCCATGGAGCATCACAAGATGGAGGCCAG...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGGACTCTTTTGGGAATTaGAGCTACGGCCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILDSFGN*SYGQKA
Trigger: AGCTTTTTGGCCGTAGCTTCAATTCCCAAAAGAGTC...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp GACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGTTCCTGCACCACTTGTaGCAGAAATGCTCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: DHKDPVEMVKDGFHGFGLFLHHL*QKCSRV
Trigger: CACTCTTGAGCATTTCTGTCACAAGTGGTGCAGGAA...CAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTAAGTCCAATCATGCCTaGCGCCCAGGGTCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GGDYGFIQLLERIGFHELKSNHA*RPGSLV
Trigger: TACCAAAGACCCTGGGCGTCAGGCATGATTGGACTT...AAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTCAATTTCCACACTTTaGACTCTCTGGCTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNSISTL*TLWLVG
Trigger: GCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGA...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCACATCCAAAGCCATCCTaGAGATCAATGGTGCTACAT +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSHPKPS*RSMVLH
Trigger: ATGTAGCACCATTGATCTTCAGGATGGCTTTGGATG...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AAAGATGACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGCAGGTTCCACCAAATaGCCCAGGGAGGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KDDHKDPVEMVKDGFHGFAGSTK*PREAFS
Trigger: AGAGAAAGCCTCCCTGGGTCATTTGGTGGAACCTGC...AAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCTCGAACACGAGACCTTaGCATTTGTTCAGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVSNTRP*HLFRGR
Trigger: ACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGA...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCCACAAAGACCCAGTTaGGATGGTCAAGGATGGATT +
Preference number: 4 (lower is better)
Translates to: TSLHCKESGVVNEARFPSPQRPS*DGQGWI
Trigger: AATCCATCCTTGACCATCTCAACTGGGTCTTTGTGG...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATTTCTCTTGGTGGTGGTaGCTATGGGTTCATACAACT +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHFSWWW*LWVHTT
Trigger: AGTTGTATGAACCCATAGTCACCACCACCAAGAGAA...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CATCTTCAGAGAACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTAAGAGTCTGGAGTGGTaGATGAGGCCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: HLQRTCQFPHFELSGSWAKSLEW*MRPVFQ
Trigger: TTGGAAAACGGGCCTCATTCACCACTCCAGACTCTT...AGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGTTCTCTGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTTTGTGTTTTGAACTATaGGAAGGGCTCCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGLCFEL*EGLLDS
Trigger: ACTGTCCAGGAGCCCTTCTCATAGTTCAAAACACAA...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATAATCCGCTTCTCAATTaGAGCCAGAGAGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHNPLLN*SQRVGS
Trigger: ACTTCCGACTCTCTGGCTGCAATTGAGAAGCGGATT...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAATACAGTCCCTCGAGATaGATTTCAGGTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: ADNSEERRRERNVLLIFQYSPSR*ISGSDF
Trigger: GAAGTCTGAACCTGAAATGCATCTCGAGGGACTGTA...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCTTGGCCTCTATCTCTaGAGCTACATTCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGLGLYL*SYILVL
Trigger: CAGAACAAGAATGTAGCTGCAGAGATAGAGGCCAAG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp CTGTTGCTGTTTTTAGCAGGCCCTGTAGCCATGAACACGCAGTTGATGATAACGTGGAGAGGATCTCCATaGTCATCAAAGTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LLLFLAGPVAMNTQLMITWRGSP*SSKWSS
Trigger: ACTGGACCACTTTGATGAGCATGGAGATCCTCTCCA...CGTTATCATCAACTGCGTGTTCATGGCTACAGGGCCTGCTAAAAACAGCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR GCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTCACGAGGTACTTGGATaGCAGGTTTTCTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCHEVLG*QVFSTR
Trigger: CCTTGTGGAGAAAACCTGGCATCCAAGTACCTCGTG...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCTACGGCCAAAAAGCTaGATGCCAACTACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: QADNSEERRRERNVLLIFLRPKS*MPTTEK
Trigger: TTTCTCAGTAGTTGGCATGCAGCTTTTTGGCCGTAG...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACCAGAAATCCCCCATGTaGCAGTGCCGTAAACATGAG +
Preference number: 4 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNQKSPM*QCRKHE
Trigger: CTCATGTTTACGGCACTGGCACATGGGGGATTTCTG...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAACAGAAATCCCCCATGTaGCAGTGCCGTAAACATGAG +
Preference number: 4 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQQKSPM*QCRKHE
Trigger: CTCATGTTTACGGCACTGGCACATGGGGGATTTCTG...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTTCCAGCCCTTAAATGTTaGCACTTGCAGCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: FGDPVWSDEAHLQRTCQFPALKC*HLQQSE
Trigger: CTCGCTCTGCTGCAAGTGGCAACATTTAAGGGCTGG...AAATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGAGTCACAGTGGACCTTaGCCTTGGCCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWSHSGP*PWPPQS
Trigger: GCTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACT...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATGTCGCCATAGAGCTTaGGCAACTTCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKCRHRA*ATSWRP
Trigger: AGGCCTCCAGGAAGTTGCCCAAGCTCTATGGCGACA...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTTGTCGCCATAGAGCTTaGGCAACTTCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FLSLGGGDYGFIQLLERICRHRA*ATSWRP
Trigger: AGGCCTCCAGGAAGTTGCCCAAGCTCTATGGCGACA...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATTCTGACCCAGGAGGCTaGTCTTTCCCAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDSDPGG*SFPDSL
Trigger: GAGAGAGTCTGGGAAAGACCAGCCTCCTGGGTCAGA...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTCTGGGACAGTCGTTTaGTTTGCTCTAGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LSGILYGQMRLIFREHVNSGTVV*FALGAV
Trigger: CACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGA...ATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTCCACACGAGGTACTTaGATGCCAGGTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSGILYGQMRLIFREHVNSTRGT*MPGFLH
Trigger: GTGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGA...ATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGAAGGAACGCAAGAATaGCCAGCTTCTCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGEGTQE*PASLLK
Trigger: CTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCATAGTTTTGGACTCTTTTaGGAATTGAAGCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: PHFELSGSWASCSPDGAHSFGLF*ELKLRP
Trigger: TGGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACT...ATGAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCTCTCTGGTTGCTTTTTaGGAACCATCTCAGGTAACC +
Preference number: 4 (lower is better)
Translates to: QADNSEERRRERNVLLIFSLVAF*EPSQVT
Trigger: GGTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGA...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCATCTCTGGTTGCTTTTTaGGAACCATCTCAGGTAACC +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSSLVAF*EPSQVT
Trigger: GGTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGA...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCGGGCAAACATCTCTCTaGTTGCTTTTTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: QADNSEERRRERNVLLIFGQTSL*LLFGNH
Trigger: ATGGTTCCCAAAAAGCAACCAGAGAGATGTTTGCCC...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTTTCATTCCTTCAAACTaGGACAGCGCACGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCFIPSN*DSARRG
Trigger: GCCTCTTCGTGCGCTGTCCCAGTTTGAAGGAATGAA...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCATCGATTCCAGACTCTaGATTCACTTTGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVIDSRL*IHFGKP
Trigger: TGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGAT...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTAGAATATCCATGCAGTaGAGGCGATCTTCACTCACC +
Preference number: 4 (lower is better)
Translates to: TSLHCKESGVVNEARFPSRISMQ*RRSSLT
Trigger: GGTGAGTGAAGATCGCCTCCACTGCATGGATATTCT...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAACAATCGCTATTCCAATaGCAATGGAGTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQQSLFQ*QWSPAS
Trigger: ACTGGCTGGACTCCATTGTCATTGGAATAGCGATTG...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATAAGCTTCCGGGTTACTaGTATTTTTACAGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHKLPGY*YFYSPS
Trigger: CGAGGGACTGTAAAAATATCAGTAACCCGGAAGCTT...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAGCTTCCGGGTTACTaGTATTTTTACAGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: IYLALRHAKAQARHQQSQKLPGY*YFYSPS
Trigger: CGAGGGACTGTAAAAATATCAGTAACCCGGAAGCTT...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GGAAAGCAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTTGGGAAAGCTTCCGGGTTACTaGTATTTTTACAGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: GKQQPKPLGKHLSGCFLGKLPGY*YFYSPS
Trigger: CGAGGGACTGTAAAAATATCAGTAACCCGGAAGCTT...TCCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTGCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATAATGAAGAAGAAGACTaGGTAGAGCCCAGTAGTACG +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHNEEED*VEPSST
Trigger: CGTACTACTGGGCTCTACTCAGTCTTCTTCTTCATT...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCATTTCAAGGGAAGTAAGTaGACTTCTGTCAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: PHFELSGSWASCSPDGAHFKGSK*TSVNSH
Trigger: ATGGGAATTGACAGAAGTTCACTTACTTCCCTTGAA...ATGAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGCTGCATGCCAACTACTaGGAAAATAAAGATCACAAT +
Preference number: 4 (lower is better)
Translates to: LALGHPKARQVSIAKSLELHANY*ENKDHN
Trigger: ATTGTGATCTTTATTTTCTCAGTAGTTGGCATGCAG...CTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATGACTCTTTTGGGAATTaGAGCTACGGCCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHDSFGN*SYGQKA
Trigger: AGCTTTTTGGCCGTAGCTTCAATTCCCAAAAGAGTC...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCCAGGCTCAGGTTGTGTaGTGCGCTGTGCATTATCTT +
Preference number: 4 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFQAQVV*CAVHYL
Trigger: AAGATAATGCACAGCGCATCACACAACCTGAGCCTG...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTATACGAGCCAGAAAATaGGGCAGACAAGCAAAACAT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGIRARK*GRQAKH
Trigger: ATGTTTTGCTTGTCTGCCTCATTTTCTGGCTCGTAT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCAATACGAGCCAGAAAATaGGGCAGACAAGCAAAACAT +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSIRARK*GRQAKH
Trigger: ATGTTTTGCTTGTCTGCCTCATTTTCTGGCTCGTAT...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAAAGATCTGGCTTGTaGCTATGTCGAACACGAGAC +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSQRSGL*LCRTRD
Trigger: GTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTG...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATGTAGAAGACCAATGTTaGACAGAGAAGGAAGCGACA +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHVEDQC*TEKEAT
Trigger: TGTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTAC...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGTCTTCATTGTGTTTTaGACTATGAGAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGVFIVF*TMRRAP
Trigger: AGGAGCCCTTCTCATAGTTCAAAACACAATGAAGAC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTACAGTCCCTCGAGATaGATTTCAGGTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHYSPSR*ISGSDF
Trigger: GAAGTCTGAACCTGAAATGCATCTCGAGGGACTGTA...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGGCTACATTCTTGTTCTaGTCCTCATATGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILATFLF*SSYAMV
Trigger: TACCATGGCATATGAGGAGCAGAACAAGAATGTAGC...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTTGGAGAGGATCTCCATaGTCATCAAAGTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCWRGSP*SSKWSS
Trigger: ACTGGACCACTTTGATGAGCATGGAGATCCTCTCCA...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATTCCCCCATGTGCCAGTaGCGTAAACATGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDSPMCQ*RKHETV
Trigger: GACAGTCTCATGTTTACGGCACTGGCACATGGGGGA...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAACCACTAGGAAGGAGTaGCAGAAATCCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKTTRKE*QKSPMC
Trigger: GCACATGGGGGATTTCTGGCACTCCTTCCTAGTGGT...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATATTCCCCGCAGAGGATaGGGAATACCACTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDIPRRG*GIPLGR
Trigger: CCTTCCTAGTGGTATTCCGCATCCTCTGCGGGGAAT...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTGATGTCTTTGCTTTGTaGAGCACAGCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPDVFAL*STASCH
Trigger: GTGGCAGGAGGCTGTGCTGCACAAAGCAAAGACATC...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGAAACATCTCTCTGGTTaGTTTTTGGGAACCATCTCA +
Preference number: 4 (lower is better)
Translates to: LACDYVEHETLTFVQRPWKHLSG*FLGTIS
Trigger: TGAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTT...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTTAGTAGGATGTGGCTATaGCAGGGAGGTGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: FGDPVWSDEAHLQRTCQFSRMWL*QGGGSF
Trigger: AAAACTGCCACCTCCCTGGCATAGCCACATCCTACT...AAATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAAATATTTATTTGGCTTTaGGACACGCAAAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEIFIWL*DTQRLR
Trigger: CCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCTGAAACATCTGCAATaGTGCAGTAGCATTAGGAAC +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGLKHLQ*CSSIRN
Trigger: GTTCCTAATGCTACTGCAGCATTGCAGATGTTTCAG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCATGCTGAACAATGAATaGACTGAGACTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: FHTLNSLARGLLVLLMELMLNNE*TETLMA
Trigger: AGCCATTAGAGTCTCAGTCCATTCATTGTTCAGCAT...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACCTTTAGGTTAACGCACAGCCACTaGGGGCAACAGTTCCACACG +
Preference number: 4 (lower is better)
Translates to: RERNVLLIFQGRNHCTFRLTHSH*GQQFHT
Trigger: CGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAA...CCTAAAGGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675223.1
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTACATCTTCTCAAAACTaGCCTCCATCTTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGTSSQN*PPSCDA
Trigger: AGCATCACAAGATGGAGGCCAGTTTTGAGAAGATGT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGGAAGGAACGCAAGAATaGCCAGCTTCTCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: IYLALRHAKAQARHQQSQEGTQE*PASLLK
Trigger: CTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTC...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTAGTTTTGGACTCTTTTaGGAATTGAAGCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGSFGLF*ELKLRP
Trigger: TGGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCCGGGTTACAGAGTTTTaGACTCTTTTGGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: FHTLNSLARGLLVLLMELRVTEF*TLLGIE
Trigger: TTCAATTCCCAAAAGAGTCCAAAACTCTGTAACCCG...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTCGATCCAGTGCTAACTaGACTTTAGTTTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCRSSAN*TLVFLA
Trigger: GGCCAGGAAAACTAAAGTCCAGTTAGCACTGGATCG...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAATACCAAGCTCCTCCTaGGTCTCTGAGCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKIPSSS*VSEPLF
Trigger: GAAAAGGGGCTCAGAGACCCAGGAGGAGCTTGGTAT...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTGGGCAAACATCTCTCTaGTTGCTTTTTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: TSLHCKESGVVNEARFPSGQTSL*LLFGNH
Trigger: ATGGTTCCCAAAAAGCAACCAGAGAGATGTTTGCCC...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGTCCACGCTACAGCATaGAAAGCAGCAACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIVHATA*KAATKA
Trigger: GGCTTTGGTTGCTGCTTTCCATGCTGTAGCGTGGAC...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTTCATTCCTTCAAACTaGGACAGCGCACGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGFWVGSQGEHLQISVPHFIPSN*DSARRG
Trigger: GCCTCTTCGTGCGCTGTCCCAGTTTGAAGGAATGAA...GTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCGTCATAAAAATGTCTTaGCCACCTAACTTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAIVIKMS*PPNFFC
Trigger: GCAGAAAAAGTTAGGTGGCCAAGACATTTTTATGAC...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCAAGGATGGATTTCATaGCTTTGGGTTGGTTGTATG +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILQGWIS*LWVGCM
Trigger: CATACAACCAACCCAAAGCCATGAAATCCATCCTTG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCAAGGATGGATTTCATaGCTTTGGGTTGGTTGTATG +
Preference number: 4 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTQGWIS*LWVGCM
Trigger: CATACAACCAACCCAAAGCCATGAAATCCATCCTTG...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTAAGACCCAGTTGAGATaGTCAAGGATGGATTTCATG +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGKTQLR*SRMDFM
Trigger: CATGAAATCCATCCTTGACCATCTCAACTGGGTCTT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCATATCGATTCCAGACTCTaGATTCACTTTGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: PHFELSGSWASCSPDGAHIDSRL*IHFGKP
Trigger: TGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGAT...ATGAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACGCTGATGTGCTTATCTaGAAGAGACAGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNADVLI*KRQSML
Trigger: CAGCATGCTCTGTCTCTTCCAGATAAGCACATCAGC...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAACCATAAATGTCCAATaGGATACTCCAGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: AIRATEYPSGEGEKNIHATINVQ*DTPEES
Trigger: TGATTCTTCTGGAGTATCCCATTGGACATTTATGGT...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
3UTR CAA 72 bp GCTCTGAACACACGGAAGGTACGCAGGGGCAATAGTTaGATGGTGATTCCTGGAATATATGACACAATCGCT +
Preference number: 4 (lower is better)
Translates to: ALNTRKVRRGNS*MVIPGIYDTIA
Trigger: AGCGATTGTGTCATATATTCCAGGAATCACCATCAAACTATTGCCCCTGCGTACCTTCCGTGTGTTCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTAATGAAGAAGAAGACTaGGTAGAGCCCAGTAGTACG +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSNEEED*VEPSST
Trigger: CGTACTACTGGGCTCTACTCAGTCTTCTTCTTCATT...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTAGGGATCGAGCGCAATaGTTTTTAGGCACATTTCTG +
Preference number: 4 (lower is better)
Translates to: HCKESGVVNEARFPSHFGRDRAQ*FLGTFL
Trigger: CAGAAATGTGCCTAAAAATCATTGCGCTCGATCCCT...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGACTCTTTTGGGAATTaGAGCTACGGCCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TCQFPHFELSGSWASCSPDSFGN*SYGQKA
Trigger: AGCTTTTTGGCCGTAGCTTCAATTCCCAAAAGAGTC...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTTCAATTTCCACACTTTaGACTCTCTGGCTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPSISTL*TLWLVG
Trigger: GCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGA...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCATCCAAAGCCATCCTaGAGATCAATGGTGCTACAT +
Preference number: 4 (lower is better)
Translates to: HCKESGVVNEARFPSHFGHPKPS*RSMVLH
Trigger: ATGTAGCACCATTGATCTTCAGGATGGCTTTGGATG...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCATCCAAAGCCATCCTaGAGATCAATGGTGCTACAT +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSHPKPS*RSMVLH
Trigger: ATGTAGCACCATTGATCTTCAGGATGGCTTTGGATG...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGGTTGGTTCTCAAGGTaGACATCTTCAAATATCAGT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGGWFSR*TSSNIS
Trigger: ACTGATATTTGAAGATGTTCACCTTGAGAACCAACC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp GACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGATACGAGCCAGAAAATaGGGCAGACAAGCAAAACAT +
Preference number: 4 (lower is better)
Translates to: DHKDPVEMVKDGFHGFGLIRARK*GRQAKH
Trigger: ATGTTTTGCTTGTCTGCCTCATTTTCTGGCTCGTAT...CAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCACAAAGATCTGGCTTGTaGCTATGTCGAACACGAGAC +
Preference number: 4 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSQRSGL*LCRTRD
Trigger: GTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTG...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGAATCCCAACCTGCTaGTGTGCTTATCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIGIPTC*CAYLEE
Trigger: CTCTTCCAGATAAGCACATCAGCAGGTTGGGATTCC...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGAGGATTGGCTTCCATaGACTTCTCTTCCATCATTG +
Preference number: 4 (lower is better)
Translates to: TCQFPHFELSGSWASCSPEDWLP*TSLPSL
Trigger: CAATGATGGAAGAGAAGTTCATGGAAGCCAATCCTC...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATTTTCGAAAGGCCTTTTaGATAATAGCAGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHFRKAF*IIAAPL
Trigger: AAGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAA...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTTACAGTCCCTCGAGATaGATTTCAGGTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSYSPSR*ISGSDF
Trigger: GAAGTCTGAACCTGAAATGCATCTCGAGGGACTGTA...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGAAAGCAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTTGGGAGCTACATTCTTGTTCTaGTCCTCATATGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: GKQQPKPLGKHLSGCFLGATFLF*SSYAMV
Trigger: TACCATGGCATATGAGGAGCAGAACAAGAATGTAGC...TCCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTGCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTCTTGGCCTCTATCTCTaGAGCTACATTCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCLGLYL*SYILVL
Trigger: CAGAACAAGAATGTAGCTGCAGAGATAGAGGCCAAG...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCTTGGCCTCTATCTCTaGAGCTACATTCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSLGLYL*SYILVL
Trigger: CAGAACAAGAATGTAGCTGCAGAGATAGAGGCCAAG...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGTCCCCCATGTGCCAGTaGCGTAAACATGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWSPMCQ*RKHETV
Trigger: GACAGTCTCATGTTTACGGCACTGGCACATGGGGGA...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTCAGAAATCCCCCATGTaGCAGTGCCGTAAACATGAG +
Preference number: 4 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIQKSPM*QCRKHE
Trigger: CTCATGTTTACGGCACTGGCACATGGGGGATTTCTG...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGCCTGAAGATCAATGGTaGTACATTCTGATAGTATAC +
Preference number: 4 (lower is better)
Translates to: LACDYVEHETLTFVQRPWPEDQW*YILIVY
Trigger: GTATACTATCAGAATGTAGCACCATTGATCTTCAGG...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATATCTTCAAATATCAGTaGCCCACTGCTCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHIFKYQ*PTAQQN
Trigger: ATTCTGCTGAGCAGTGGGGCACTGATATTTGAAGAT...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CTGTTGCTGTTTTTAGCAGGCCCTGTAGCCATGAACACGCAGTTGATGATAACGTGTAACCGAGTGAATTaGTCTCAAACTCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLLFLAGPVAMNTQLMITCNRVN*SQTLAV
Trigger: AACAGCCAGAGTTTGAGAGCAATTCACTCGGTTACA...CGTTATCATCAACTGCGTGTTCATGGCTACAGGGCCTGCTAAAAACAGCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR GCA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTATATTTATTTGGCTTTaGGACACGCAAAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TSLHCKESGVVNEARFPSIFIWL*DTQRLR
Trigger: CCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCATAGGGCTTATAGTTaGACAGGAAAGGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILHRAYS*TGKVEL
Trigger: AAGTTCTACCTTTCCTGTGCAACTATAAGCCCTATG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGATCTGGAAAGATTACTaGGTAGCATCTGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILIWKDY*VASVIH
Trigger: ATGGATGACAGATGCTACCCAGTAATCTTTCCAGAT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCAATCTGGAAAGATTACTaGGTAGCATCTGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSIWKDY*VASVIH
Trigger: ATGGATGACAGATGCTACCCAGTAATCTTTCCAGAT...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGTTTTCTCCTTTTGGATaGCAATCCGCTTCTCAATTG +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILFSPFG*QSASQL
Trigger: CAATTGAGAAGCGGATTGCCATCCAAAAGGAGAAAA...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTTTCTTTTTCTCCTTTTaGATGGCAATCCGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGFFFSF*MAIRFS
Trigger: TGAGAAGCGGATTGCCATCCAAAAGGAGAAAAAGAA...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGGTACTTCTCCTGTCTaGTCTTTAGACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGGTSPV*SLDFFF
Trigger: GAAAAAGAAGTCTAAAGACCAGACAGGAGAAGTACC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCAGGTACTTCTCCTGTCTaGTCTTTAGACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSGTSPV*SLDFFF
Trigger: GAAAAAGAAGTCTAAAGACCAGACAGGAGAAGTACC...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATTTCTCCCAGGAATCTTaGGTCATCAGCCGGAACATG +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDFSQES*VISRNM
Trigger: CATGTTCCGGCTGATGACCCAAGATTCCTGGGAGAA...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCTTCTGTCAATTCCCATaGCAACCAGAGCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVFCQFP*QPEPPF
Trigger: AAAAGGAGGCTCTGGTTGCCATGGGAATTGACAGAA...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTTTCTGTCAATTCCCATaGCAACCAGAGCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSFCQFP*QPEPPF
Trigger: AAAAGGAGGCTCTGGTTGCCATGGGAATTGACAGAA...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATCTGGGACAGTCGTTTaGTTTGCTCTAGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKSGTVV*FALGAV
Trigger: CACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGA...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTCCATGCTCATCAAAGTaGTCCAGTGATAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: TCQFPHFELSGSWASCSPPCSSK*SSDRFW
Trigger: CCAGAATCTATCACTGGACCACTTTGATGAGCATGG...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACCCATGCTCATCAAAGTaGTCCAGTGATAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNPCSSK*SSDRFW
Trigger: CCAGAATCTATCACTGGACCACTTTGATGAGCATGG...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAACGGGTTACAGAGTTTTaGACTCTTTTGGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGERVTEF*TLLGIE
Trigger: TTCAATTCCCAAAAGAGTCCAAAACTCTGTAACCCG...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCATTGCTCTCAAACTCTaGCTGTTGTTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QADNSEERRRERNVLLIFIALKL*LLFFLC
Trigger: ACAGAGAAAGAACAACAGCCAGAGTTTGAGAGCAAT...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCAATTGCTCTCAAACTCTaGCTGTTGTTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSIALKL*LLFFLC
Trigger: ACAGAGAAAGAACAACAGCCAGAGTTTGAGAGCAAT...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTATGATGTCAAAGATCTaGCTTGTGACTATGTCGAAC +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGMMSKI*LVTMSN
Trigger: GTTCGACATAGTCACAAGCCAGATCTTTGACATCAT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGGCTATGCCAGGGAGGTaGCAGTTTTCTGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWAMPGR*QFSEEE
Trigger: CTCTTCCTCAGAAAACTGCCACCTCCCTGGCATAGC...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGATCTGGCACCCATGTaGATTTTGAACAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGDLAPM*ILNKGK
Trigger: TTTTCCTTTGTTCAAAATCCACATGGGTGCCAGATC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGGCACAGTTCACACTGTaGTTTAAGTTAACATGGGAT +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILAQFTL*FKLTWD
Trigger: ATCCCATGTTAACTTAAACCACAGTGTGAACTGTGC...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR CAA 72 bp AAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTaGACATTTGTTCAGAGGCCGTGGAATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KDLACDYVEHET*TFVQRPWNGFL
Trigger: CAAAAACCCATTCCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CAA 72 bp GTGAAGACACACTCTGCAATGTCAGTATTGTTACTGTaGCTGTTTTTAGCAGGCCCTGTAGCCATGAACACG +
Preference number: 4 (lower is better)
Translates to: VKTHSAMSVLLL*LFLAGPVAMNT
Trigger: CGTGTTCATGGCTACAGGGCCTGCTAAAAACAGCAACAGTAACAATACTGACATTGCAGAGTGTGTCTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTCCAGAGGCTTTCCTATaGGCTCACGAGGAATGTCGC +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFPEAFL*AHEECR
Trigger: GCGACATTCCTCGTGAGCTCATAGGAAAGCCTCTGG...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AACATGCTGAACAATGAATGGACTGAGACTCTAATGGCTAAACTTCTGATTGAACCAGAGGCTTTCCTATaGGCTCACGAGGAATGTCGC +
Preference number: 4 (lower is better)
Translates to: NMLNNEWTETLMAKLLIEPEAFL*AHEECR
Trigger: GCGACATTCCTCGTGAGCTCATAGGAAAGCCTCTGG...TTCAATCAGAAGTTTAGCCATTAGAGTCTCAGTCCATTCATTGTTCAGCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTAAATATAAATCCCAGTaGAGACACACTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGKYKSQ*RHTLQC
Trigger: ACATTGCAGAGTGTGTCTTCACTGGGATTTATATTT...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTTTGCTTTCAAAGCTCTaGACACACGGAAGGTACGCA +
Preference number: 4 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTLLSKL*THGRYA
Trigger: TGCGTACCTTCCGTGTGTTCAGAGCTTTGAAAGCAA...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTCAAGGGAAGTAAGTaGACTTCTGTCAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHFKGSK*TSVNSH
Trigger: ATGGGAATTGACAGAAGTTCACTTACTTCCCTTGAA...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCTGCATGCCAACTACTaGGAAAATAAAGATCACAAT +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILLHANY*ENKDHN
Trigger: ATTGTGATCTTTATTTTCTCAGTAGTTGGCATGCAG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTGCAGGTTCCACCAAATaGCCCAGGGAGGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFAGSTK*PREAFS
Trigger: AGAGAAAGCCTCCCTGGGTCATTTGGTGGAACCTGC...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATGGTTGGTTCTCAAGGTaGACATCTTCAAATATCAGT +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHGWFSR*TSSNIS
Trigger: ACTGATATTTGAAGATGTTCACCTTGAGAACCAACC...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAAGCACCAGGCACTGGTaGAATACTTTCCAAATCCGA +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKSTRHW*NTFQIR
Trigger: TCGGATTTGGAAAGTATTTCACCAGTGCCTGGTGCT...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTGTAGAAGACCAATGTTaGACAGAGAAGGAAGCGACA +
Preference number: 4 (lower is better)
Translates to: GGDYGFIQLLERIGFHELVEDQC*TEKEAT
Trigger: TGTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTAC...AAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGTTTCGAAAGGCCTTTTaGATAATAGCAGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: IYLALRHAKAQARHQQSQFRKAF*IIAAPL
Trigger: AAGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAA...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATGACAGTCGTTTGGTTTaGTCTAGGAGCTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDDSRLV*SRSCGF
Trigger: AAAGCCACAGCTCCTAGAGCAAACCAAACGACTGTC...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGCACGAGGTACTTGGATaGCAGGTTTTCTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWHEVLG*QVFSTR
Trigger: CCTTGTGGAGAAAACCTGGCATCCAAGTACCTCGTG...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGACAGTTCATTACATCTaGAAAACTCAGAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILTVHYI*KTQKSN
Trigger: GTTGCTCTTCTGAGTTTTGCAGATGTAATGAACTGT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGATGCATTCGCTTCTTaGATACATTCCCACATATTT +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGDAFAS*IHSHIF
Trigger: AAATATGTGGGAATGTATGCAAGAAGCGAATGCATC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCAGATGCATTCGCTTCTTaGATACATTCCCACATATTT +
Preference number: 4 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSDAFAS*IHSHIF
Trigger: AAATATGTGGGAATGTATGCAAGAAGCGAATGCATC...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATGATGCATTCGCTTCTTaGATACATTCCCACATATTT +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHDAFAS*IHSHIF
Trigger: AAATATGTGGGAATGTATGCAAGAAGCGAATGCATC...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CTGTTGCTGTTTTTAGCAGGCCCTGTAGCCATGAACACGCAGTTGATGATAACGTTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LLLFLAGPVAMNTQLMITLCDAL*IIFTRK
Trigger: TTTTCTGGTGAAGATAATGCACAGCGCATCACACAA...CGTTATCATCAACTGCGTGTTCATGGCTACAGGGCCTGCTAAAAACAGCAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR GCA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAACCTGAAGATCAATGGTaGTACATTCTGATAGTATAC +
Preference number: 4 (lower is better)
Translates to: ADNSEERRRERNVLLIFQPEDQW*YILIVY
Trigger: GTATACTATCAGAATGTAGCACCATTGATCTTCAGG...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCATCTTCAAATATCAGTaGCCCACTGCTCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVIFKYQ*PTAQQN
Trigger: ATTCTGCTGAGCAGTGGGGCACTGATATTTGAAGAT...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGAGTAGGATGTGGCTATaGCAGGGAGGTGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWSRMWL*QGGGSF
Trigger: AAAACTGCCACCTCCCTGGCATAGCCACATCCTACT...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTGTTGCTGTTTTTAGCAGGCCCTGTAGCCATGAACACGCAGTTGATGATAACGTTTTCTCCTTTTGGATaGCAATCCGCTTCTCAATTG +
Preference number: 4 (lower is better)
Translates to: LLLFLAGPVAMNTQLMITFSPFG*QSASQL
Trigger: CAATTGAGAAGCGGATTGCCATCCAAAAGGAGAAAA...CGTTATCATCAACTGCGTGTTCATGGCTACAGGGCCTGCTAAAAACAGCAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTGTCGCCATAGAGCTTaGGCAACTTCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFCRHRA*ATSWRP
Trigger: AGGCCTCCAGGAAGTTGCCCAAGCTCTATGGCGACA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp TTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATACATTCATATTGTATaGAACAGGCACTGTTACCCA +
Preference number: 4 (lower is better)
Translates to: LATPKLDKSPLQRVWSGEYIHIV*NRHCYP
Trigger: TGGGTAACAGTGCCTGTTCCATACAATATGAATGTA...TTCACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATTACATTCATATTGTATaGAACAGGCACTGTTACCCA +
Preference number: 4 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHYIHIV*NRHCYP
Trigger: TGGGTAACAGTGCCTGTTCCATACAATATGAATGTA...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCTCCAGTGATAGATTCTaGGACAGTCGTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFSSDRF*DSRLVC
Trigger: GCAAACCAAACGACTGTCCCAGAATCTATCACTGGA...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTAACGCACAGCCACTaGGGGCAACAGTTCCACACG +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFLTHSH*GQQFHT
Trigger: CGTGTGGAACTGTTGCCCCCAGTGGCTGTGCGTTAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGGTAATTCTTGGATTTTaGGTTGGTTCTCAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILVILGF*VGSQGE
Trigger: TTCACCTTGAGAACCAACCCAAAATCCAAGAATTAC...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGTTGTTCTTTCTCTGTaGAATCAACAGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGVVLSL*NQQLHI
Trigger: TATATGCAGCTGTTGATTCCACAGAGAAAGAACAAC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGTCATAAAAATGTCTTaGCCACCTAACTTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: DILLKAQSRVGHGALYRGVIKMS*PPNFFC
Trigger: GCAGAAAAAGTTAGGTGGCCAAGACATTTTTATGAC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTTGTTCAGAGGCCGTaGAATGGGTTTTTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNFVQRP*NGFLRF
Trigger: AAACCTCAAAAACCCATTCCACGGCCTCTGAACAAA...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCCAAGGATGGATTTCATaGCTTTGGGTTGGTTGTATG +
Preference number: 4 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVQGWIS*LWVGCM
Trigger: CATACAACCAACCCAAAGCCATGAAATCCATCCTTG...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTAAGACCCAGTTGAGATaGTCAAGGATGGATTTCATG +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSKTQLR*SRMDFM
Trigger: CATGAAATCCATCCTTGACCATCTCAACTGGGTCTT...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR CAA 72 bp ACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTaGGGTTGGTTGTATGATTCAGCCATCATGCTAATC +
Preference number: 4 (lower is better)
Translates to: TQLRWSRMDFMA*GWLYDSAIMLI
Trigger: GATTAGCATGATGGCTGAATCATACAACCAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGGCAAGGCCCCCACGATaGCCTTCAGACGTGAAACTA +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLARPPR*PSDVKL
Trigger: TAGTTTCACGTCTGAAGGTCATCGTGGGGGCCTTGC...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTGGTTCAGACTTCCCATaGAGAGCTGCTGACCTACCA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFGSDFP*RAADLP
Trigger: TGGTAGGTCAGCAGCTCTTCATGGGAAGTCTGAACC...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGCTGGCCTCCATCTTGTaGTGCTCCATGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKLASIL*CSMAKK
Trigger: CTTCTTGGCCATGGAGCATCACAAGATGGAGGCCAG...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTAGGGATCGAGCGCAATaGTTTTTAGGCACATTTCTG +
Preference number: 4 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPRDRAQ*FLGTFL
Trigger: CAGAAATGTGCCTAAAAATCATTGCGCTCGATCCCT...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGTCCTGTATGGTCAGATaGGGCTCATCTTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWSCMVR*GSSSEN
Trigger: GTTCTCTGAAGATGAGCCTCATCTGACCATACAGGA...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTATACGAGCCAGAAAATaGGGCAGACAAGCAAAACAT +
Preference number: 4 (lower is better)
Translates to: GGDYGFIQLLERIGFHELIRARK*GRQAKH
Trigger: ATGTTTTGCTTGTCTGCCTCATTTTCTGGCTCGTAT...AAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CTAATGGCTAAACTTCTGATTGAATTGAAAGGCCCAAAAATGAACAAGGCATGCAAGAGTCTGGAGTGGTaGATGAGGCCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LMAKLLIELKGPKMNKACKSLEW*MRPVFQ
Trigger: TTGGAAAACGGGCCTCATTCACCACTCCAGACTCTT...GCATGCCTTGTTCATTTTTGGGCCTTTCAATTCAATCAGAAGTTTAGCCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGAGGGGCCTTGGGAGCTaGTTGGCTGTGAAGATCAGA +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLRGLGS*LAVKIR
Trigger: TCTGATCTTCACAGCCAATCAGCTCCCAAGGCCCCT...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAATTGTACCTTTAGGCTaGAGCTGCCCATGGATCTTT +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKIVPLG*SCPWIF
Trigger: AAAGATCCATGGGCAGCTTCAGCCTAAAGGTACAAT...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675223.1
CDS-3UTR GCA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTCTACGGCCAAAAAGCTaGATGCCAACTACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTLRPKS*MPTTEK
Trigger: TTTCTCAGTAGTTGGCATGCAGCTTTTTGGCCGTAG...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATCCTGAAGATCAATGGTaGTACATTCTGATAGTATAC +
Preference number: 4 (lower is better)
Translates to: SLHCKESGVVNEARFPSHPEDQW*YILIVY
Trigger: GTATACTATCAGAATGTAGCACCATTGATCTTCAGG...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTCGAAAAGAATATCCATaGAGTGGAGGCGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTRKEYP*SGGDLH
Trigger: GTGAAGATCGCCTCCACTGCATGGATATTCTTTTCG...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTAAGGGGGCACAGCAGTaGCACAGGGGCACAATAATT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFKGAQQ*HRGTII
Trigger: AATTATTGTGCCCCTGTGGCACTGCTGTGCCCCCTT...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTTTTTCTCCTTTTGGATaGCAATCCGCTTCTCAATTG +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSFSPFG*QSASQL
Trigger: CAATTGAGAAGCGGATTGCCATCCAAAAGGAGAAAA...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTTTCTTTTTCTCCTTTTaGATGGCAATCCGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DIYLALRHAKAQARHQQSFFFSF*MAIRFS
Trigger: TGAGAAGCGGATTGCCATCCAAAAGGAGAAAAAGAA...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGTACATTCATATTGTATaGAACAGGCACTGTTACCCA +
Preference number: 4 (lower is better)
Translates to: IYLALRHAKAQARHQQSQYIHIV*NRHCYP
Trigger: TGGGTAACAGTGCCTGTTCCATACAATATGAATGTA...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AAAGATGACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTTTCTGTCAATTCCCATaGCAACCAGAGCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KDDHKDPVEMVKDGFHGFFCQFP*QPEPPF
Trigger: AAAAGGAGGCTCTGGTTGCCATGGGAATTGACAGAA...AAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTCTGACCCAGGAGGCTaGTCTTTCCCAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLSDPGG*SFPDSL
Trigger: GAGAGAGTCTGGGAAAGACCAGCCTCCTGGGTCAGA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATCCATGCTCATCAAAGTaGTCCAGTGATAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDPCSSK*SSDRFW
Trigger: CCAGAATCTATCACTGGACCACTTTGATGAGCATGG...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCAACATCTTCTCAAAACTaGCCTCCATCTTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: SIPDSGFTLENQFIPRMATSSQN*PPSCDA
Trigger: AGCATCACAAGATGGAGGCCAGTTTTGAGAAGATGT...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTCCTCCTCCGCAAGTaGTGCCAACCAAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFFLLRK*CQPSPI
Trigger: GATTGGACTTGGTTGGCACCACTTGCGGAGGAGGAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTTCTCTGGTTGCTTTTTaGGAACCATCTCAGGTAACC +
Preference number: 4 (lower is better)
Translates to: FLSLGGGDYGFIQLLERISLVAF*EPSQVT
Trigger: GGTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGA...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGGTTGTTCTTTCTCTGTaGAATCAACAGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: IYLALRHAKAQARHQQSQVVLSL*NQQLHI
Trigger: TATATGCAGCTGTTGATTCCACAGAGAAAGAACAAC...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTATTGCTCTCAAACTCTaGCTGTTGTTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TCQFPHFELSGSWASCSPIALKL*LLFFLC
Trigger: ACAGAGAAAGAACAACAGCCAGAGTTTGAGAGCAAT...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGGTCATAAAAATGTCTTaGCCACCTAACTTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: IYLALRHAKAQARHQQSQVIKMS*PPNFFC
Trigger: GCAGAAAAAGTTAGGTGGCCAAGACATTTTTATGAC...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCATGATGTCAAAGATCTaGCTTGTGACTATGTCGAAC +
Preference number: 4 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVMMSKI*LVTMSN
Trigger: GTTCGACATAGTCACAAGCCAGATCTTTGACATCAT...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTATGATGTCAAAGATCTaGCTTGTGACTATGTCGAAC +
Preference number: 4 (lower is better)
Translates to: TCQFPHFELSGSWASCSPMMSKI*LVTMSN
Trigger: GTTCGACATAGTCACAAGCCAGATCTTTGACATCAT...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGTATGAGAAGGGCTCCTaGACAGTTTTACATAATTAT +
Preference number: 4 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILYEKGS*TVLHNY
Trigger: ATAATTATGTAAAACTGTCCAGGAGCCCTTCTCATA...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
3UTR CAA 72 bp CACTCTGAAGGAACGCAAGAATGGCCAGCTTCTCTTTaGAAGTACACAGTTCATTACATCTGCAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: HSEGTQEWPASL*KYTVHYICKTQ
Trigger: CTGAGTTTTGCAGATGTAATGAACTGTGTACTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTCAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGAGGCATGCTTGGCACTaGAGCGGTAGATTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLRHAWH*SGRLSS
Trigger: AGAGGACAATCTACCGCTTCAGTGCCAAGCATGCCT...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACGATTCCTGGAATATATaGCACAATCGCTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNDSWNI*HNRYSN
Trigger: ATTGGAATAGCGATTGTGTCATATATTCCAGGAATC...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGAGGGATCGAGCGCAATaGTTTTTAGGCACATTTCTG +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWRDRAQ*FLGTFL
Trigger: CAGAAATGTGCCTAAAAATCATTGCGCTCGATCCCT...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCTGCATGCCAACTACTaGGAAAATAAAGATCACAAT +
Preference number: 4 (lower is better)
Translates to: HCKESGVVNEARFPSHFGLHANY*ENKDHN
Trigger: ATTGTGATCTTTATTTTCTCAGTAGTTGGCATGCAG...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTCAATTTCCACACTTTaGACTCTCTGGCTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSISTL*TLWLVG
Trigger: GCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp CTAATGGCTAAACTTCTGATTGAATTGAAAGGCCCAAAAATGAACAAGGCATGCCAAAGATCTGGCTTGTaGCTATGTCGAACACGAGAC +
Preference number: 4 (lower is better)
Translates to: LMAKLLIELKGPKMNKACQRSGL*LCRTRD
Trigger: GTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTG...GCATGCCTTGTTCATTTTTGGGCCTTTCAATTCAATCAGAAGTTTAGCCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCAAAAGGAATGTGCTCCTaGTTTTCCAAGGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: SIPDSGFTLENQFIPRMAKGMCS*FSKVEI
Trigger: GATTTCTACCTTGGAAAATCAGGAGCACATTCCTTT...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGCTTGGCCTCTATCTCTaGAGCTACATTCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWLGLYL*SYILVL
Trigger: CAGAACAAGAATGTAGCTGCAGAGATAGAGGCCAAG...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGGCACTCAGTGCTCTCTaGCTTTGGAGAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLALSAL*LWRGSP
Trigger: TGGAGATCCTCTCCAAAGGCAGAGAGCACTGAGTGC...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp CATCTTCAGAGAACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTACAGTTCATTACATCTaGAAAACTCAGAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: HLQRTCQFPHFELSGSWATVHYI*KTQKSN
Trigger: GTTGCTCTTCTGAGTTTTGCAGATGTAATGAACTGT...AGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGTTCTCTGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACACAGTTCATTACATCTaGAAAACTCAGAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNTVHYI*KTQKSN
Trigger: GTTGCTCTTCTGAGTTTTGCAGATGTAATGAACTGT...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGCTACGGCCAAAAAGCTaGATGCCAACTACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWLRPKS*MPTTEK
Trigger: TTTCTCAGTAGTTGGCATGCAGCTTTTTGGCCGTAG...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTAACCAAGTCCAATCATaGCTGACGCCCAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFNQVQS*LTPRVF
Trigger: AAAGACCCTGGGCGTCAGGCATGATTGGACTTGGTT...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCAAAACATCTCTCTGGTTaGTTTTTGGGAACCATCTCA +
Preference number: 4 (lower is better)
Translates to: SIPDSGFTLENQFIPRMAKHLSG*FLGTIS
Trigger: TGAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTT...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGCCAGCCCTTAAATGTTaGCACTTGCAGCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLPALKC*HLQQSE
Trigger: CTCGCTCTGCTGCAAGTGGCAACATTTAAGGGCTGG...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATTGTAACCGAGTGAATTaGTCTCAAACTCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDCNRVN*SQTLAV
Trigger: AACAGCCAGAGTTTGAGAGCAATTCACTCGGTTACA...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACCTTTAGGCGAAAAGAATATCCATaGAGTGGAGGCGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: RERNVLLIFQGRNHCTFRRKEYP*SGGDLH
Trigger: GTGAAGATCGCCTCCACTGCATGGATATTCTTTTCG...CCTAAAGGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675223.1
CDS-3UTR CCA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCAGGTACTTCTCCTGTCTaGTCTTTAGACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SIPDSGFTLENQFIPRMAGTSPV*SLDFFF
Trigger: GAAAAAGAAGTCTAAAGACCAGACAGGAGAAGTACC...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGGCTTGGGCAACTTCCTaGAGGCCTTTAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLAWATS*RPLGQA
Trigger: AGCTTGACCTAAAGGCCTCCAGGAAGTTGCCCAAGC...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTCCACACGAGGTACTTaGATGCCAGGTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSTRGT*MPGFLH
Trigger: GTGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAACATCTTCTCAAAACTaGCCTCCATCTTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKTSSQN*PPSCDA
Trigger: AGCATCACAAGATGGAGGCCAGTTTTGAGAAGATGT...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGGAAGGAACGCAAGAATaGCCAGCTTCTCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWEGTQE*PASLLK
Trigger: CTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTC...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCATCCTGAAGATCAATaGTGCTACATTCTGATAGTA +
Preference number: 4 (lower is better)
Translates to: HCKESGVVNEARFPSHFGHPEDQ*CYILIV
Trigger: TACTATCAGAATGTAGCACCATTGATCTTCAGGATG...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGAGCAACCAAAGCCTTTaGGCAAACATCTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWSNQSL*ANISLV
Trigger: AACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCT...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGGTCCACGCTACAGCATaGAAAGCAGCAACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLVHATA*KAATKA
Trigger: GGCTTTGGTTGCTGCTTTCCATGCTGTAGCGTGGAC...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCGTAATTCTTGGATTTTaGGTTGGTTCTCAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVVILGF*VGSQGE
Trigger: TTCACCTTGAGAACCAACCCAAAATCCAAGAATTAC...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTCATTCCTTCAAACTaGGACAGCGCACGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFFIPSN*DSARRG
Trigger: GCCTCTTCGTGCGCTGTCCCAGTTTGAAGGAATGAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTGTCATAAAAATGTCTTaGCCACCTAACTTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ERRRERNVLLIFQGRNHCVIKMS*PPNFFC
Trigger: GCAGAAAAAGTTAGGTGGCCAAGACATTTTTATGAC...ACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCAATGATGTCAAAGATCTaGCTTGTGACTATGTCGAAC +
Preference number: 4 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSMMSKI*LVTMSN
Trigger: GTTCGACATAGTCACAAGCCAGATCTTTGACATCAT...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTAAGACCCAGTTGAGATaGTCAAGGATGGATTTCATG +
Preference number: 4 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTKTQLR*SRMDFM
Trigger: CATGAAATCCATCCTTGACCATCTCAACTGGGTCTT...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGATCTTCACTCACCATaGGCAAGTCCATTACTAGAA +
Preference number: 4 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTDLHSP*ASPLLE
Trigger: TTCTAGTAATGGACTTGCCCATGGTGAGTGAAGATC...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
3UTR CAA 72 bp CTTGGTCACCTTCATCATGTACTTTCGAAAGGCCTTTaGAATAATAGCAGCACCTCTTTCCTCTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGHLHHVLSKGL*NNSSTSFLFLS
Trigger: AGAAAGGAAGAGGAAAGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAAGTACATGATGAAGGTGACCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTTAAATATAAATCCCAGTaGAGACACACTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: FGDPVWSDEAHLQRTCQFKYKSQ*RHTLQC
Trigger: ACATTGCAGAGTGTGTCTTCACTGGGATTTATATTT...AAATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTGCTTTCAAAGCTCTaGACACACGGAAGGTACGCA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFLLSKL*THGRYA
Trigger: TGCGTACCTTCCGTGTGTTCAGAGCTTTGAAAGCAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCACTGCATGCCAACTACTaGGAAAATAAAGATCACAAT +
Preference number: 4 (lower is better)
Translates to: SIPDSGFTLENQFIPRMALHANY*ENKDHN
Trigger: ATTGTGATCTTTATTTTCTCAGTAGTTGGCATGCAG...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTCCTGTATGGTCAGATaGGGCTCATCTTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSCMVR*GSSSEN
Trigger: GTTCTCTGAAGATGAGCCTCATCTGACCATACAGGA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATGGTTGGTTCTCAAGGTaGACATCTTCAAATATCAGT +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDGWFSR*TSSNIS
Trigger: ACTGATATTTGAAGATGTTCACCTTGAGAACCAACC...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTCGAACACGAGACCTTaGCATTTGTTCAGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLSNTRP*HLFRGR
Trigger: ACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTTTTGGGTTGGTTGTATaGTTCAGCCATCATGCTAAT +
Preference number: 4 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTFGLVV*FSHHAN
Trigger: ATTAGCATGATGGCTGAATCATACAACCAACCCAAA...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AAAGATGACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTAAAGGAATGTGCTCCTaGTTTTCCAAGGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: KDDHKDPVEMVKDGFHGFKGMCS*FSKVEI
Trigger: GATTTCTACCTTGGAAAATCAGGAGCACATTCCTTT...AAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTCATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp ATTTTGATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATGGGAGGATTGGCTTCCATaGACTTCTCTTCCATCATTG +
Preference number: 4 (lower is better)
Translates to: ILMRHSNVKMTTKTQLRWEDWLP*TSLPSL
Trigger: CAATGATGGAAGAGAAGTTCATGGAAGCCAATCCTC...CCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCATCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTGGAGAGGATCTCCATaGTCATCAAAGTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFWRGSP*SSKWSS
Trigger: ACTGGACCACTTTGATGAGCATGGAGATCCTCTCCA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGCACGAGGTACTTGGATaGCAGGTTTTCTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLHEVLG*QVFSTR
Trigger: CCTTGTGGAGAAAACCTGGCATCCAAGTACCTCGTG...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATTTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDLCDAL*IIFTRK
Trigger: TTTTCTGGTGAAGATAATGCACAGCGCATCACACAA...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGATATTTATTTGGCTTTaGGACACGCAAAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWIFIWL*DTQRLR
Trigger: CCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTATCTGGAAAGATTACTaGGTAGCATCTGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIIWKDY*VASVIH
Trigger: ATGGATGACAGATGCTACCCAGTAATCTTTCCAGAT...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTTTCTTTTTCTCCTTTTaGATGGCAATCCGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTFFFSF*MAIRFS
Trigger: TGAGAAGCGGATTGCCATCCAAAAGGAGAAAAAGAA...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTATGCTGAACAATGAATaGACTGAGACTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPMLNNE*TETLMA
Trigger: AGCCATTAGAGTCTCAGTCCATTCATTGTTCAGCAT...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp ATTTTGATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATGGTCCAGTGATAGATTCTaGGACAGTCGTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ILMRHSNVKMTTKTQLRWSSDRF*DSRLVC
Trigger: GCAAACCAAACGACTGTCCCAGAATCTATCACTGGA...CCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCATCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTCGGGGATCCTGTATaGTCAGATGAGGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFFGDPV*SDEAHL
Trigger: AAGATGAGCCTCATCTGACCATACAGGATCCCCGAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp GGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCATCCTGAAGATCAATaGTGCTACATTCTGATAGTA +
Preference number: 4 (lower is better)
Translates to: GGDYGFIQLLERIGFHELHPEDQ*CYILIV
Trigger: TACTATCAGAATGTAGCACCATTGATCTTCAGGATG...AAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCAGTAATTCTTGGATTTTaGGTTGGTTCTCAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SIPDSGFTLENQFIPRMAVILGF*VGSQGE
Trigger: TTCACCTTGAGAACCAACCCAAAATCCAAGAATTAC...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATAAATATAAATCCCAGTaGAGACACACTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDKYKSQ*RHTLQC
Trigger: ACATTGCAGAGTGTGTCTTCACTGGGATTTATATTT...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp AGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACCTTTAGGGGTTGGTTCTCAAGGTaGACATCTTCAAATATCAGT +
Preference number: 4 (lower is better)
Translates to: RERNVLLIFQGRNHCTFRGWFSR*TSSNIS
Trigger: ACTGATATTTGAAGATGTTCACCTTGAGAACCAACC...CCTAAAGGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675223.1
CDS-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGCCACAAAGACCCAGTTaGGATGGTCAAGGATGGATT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLPQRPS*DGQGWI
Trigger: AATCCATCCTTGACCATCTCAACTGGGTCTTTGTGG...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTCTACGGCCAAAAAGCTaGATGCCAACTACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFLRPKS*MPTTEK
Trigger: TTTCTCAGTAGTTGGCATGCAGCTTTTTGGCCGTAG...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGATGCATTCGCTTCTTaGATACATTCCCACATATTT +
Preference number: 4 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIDAFAS*IHSHIF
Trigger: AAATATGTGGGAATGTATGCAAGAAGCGAATGCATC...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGAAACATCTCTCTGGTTaGTTTTTGGGAACCATCTCA +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWKHLSG*FLGTIS
Trigger: TGAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTT...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACCTTTAGGTTTTCTCCTTTTGGATaGCAATCCGCTTCTCAATTG +
Preference number: 4 (lower is better)
Translates to: RERNVLLIFQGRNHCTFRFSPFG*QSASQL
Trigger: CAATTGAGAAGCGGATTGCCATCCAAAAGGAGAAAA...CCTAAAGGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATTCCTTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675223.1
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTCTGTCAATTCCCATaGCAACCAGAGCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFFCQFP*QPEPPF
Trigger: AAAAGGAGGCTCTGGTTGCCATGGGAATTGACAGAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTCCATGCTCATCAAAGTaGTCCAGTGATAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFPCSSK*SSDRFW
Trigger: CCAGAATCTATCACTGGACCACTTTGATGAGCATGG...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTCTCTGGTTGCTTTTTaGGAACCATCTCAGGTAACC +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSLVAF*EPSQVT
Trigger: GGTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAGTTGTTCTTTCTCTGTaGAATCAACAGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKVVLSL*NQQLHI
Trigger: TATATGCAGCTGTTGATTCCACAGAGAAAGAACAAC...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTTATGATGATGATGTCAAAGATCTGGCTTGTGACTATGTCGAACACGAGACCTGTTGTTCTTTCTCTGTaGAATCAACAGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: LMMMMSKIWLVTMSNTRPVVLSL*NQQLHI
Trigger: TATATGCAGCTGTTGATTCCACAGAGAAAGAACAAC...AGGTCTCGTGTTCGACATAGTCACAAGCCAGATCTTTGACATCATCATCATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp CTAATGGCTAAACTTCTGATTGAATTGAAAGGCCCAAAAATGAACAAGGCATGCAAGACCCAGTTGAGATaGTCAAGGATGGATTTCATG +
Preference number: 4 (lower is better)
Translates to: LMAKLLIELKGPKMNKACKTQLR*SRMDFM
Trigger: CATGAAATCCATCCTTGACCATCTCAACTGGGTCTT...GCATGCCTTGTTCATTTTTGGGCCTTTCAATTCAATCAGAAGTTTAGCCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CCA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGATCGATTCCAGACTCTaGATTCACTTTGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWIDSRL*IHFGKP
Trigger: TGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGAT...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
3UTR CAA 72 bp ATAGTCAGGATTAATTTTGGTGTGCTTACATTCATATaGTATGGAACAGGCACTGTTACCCATCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: IVRINFGVLTFI*YGTGTVTHPDA
Trigger: GGCATCTGGATGGGTAACAGTGCCTGTTCCATACAATATGAATGTAAGCACACCAAAATTAATCCTGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGAGGGATCGAGCGCAATaGTTTTTAGGCACATTTCTG +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLRDRAQ*FLGTFL
Trigger: CAGAAATGTGCCTAAAAATCATTGCGCTCGATCCCT...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGCATCCAAAGCCATCCTaGAGATCAATGGTGCTACAT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLHPKPS*RSMVLH
Trigger: ATGTAGCACCATTGATCTTCAGGATGGCTTTGGATG...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp ATTTTGATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATGGTTTCGAAAGGCCTTTTaGATAATAGCAGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: ILMRHSNVKMTTKTQLRWFRKAF*IIAAPL
Trigger: AAGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAA...CCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCATCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR GCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTACAGTCCCTCGAGATaGATTTCAGGTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLYSPSR*ISGSDF
Trigger: GAAGTCTGAACCTGAAATGCATCTCGAGGGACTGTA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTATCTTCAAATATCAGTaGCCCACTGCTCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFIFKYQ*PTAQQN
Trigger: ATTCTGCTGAGCAGTGGGGCACTGATATTTGAAGAT...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTGAAATTCCGCTCATCTaGAAAGATTACTGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFEIPLI*KDYWVA
Trigger: TGCTACCCAGTAATCTTTCCAGATGAGCGGAATTTC...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTCCAGTGATAGATTCTaGGACAGTCGTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLSSDRF*DSRLVC
Trigger: GCAAACCAAACGACTGTCCCAGAATCTATCACTGGA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGGGGCAAACATCTCTCTaGTTGCTTTTTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLGQTSL*LLFGNH
Trigger: ATGGTTCCCAAAAAGCAACCAGAGAGATGTTTGCCC...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGAGCAACCAAAGCCTTTaGGCAAACATCTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLSNQSL*ANISLV
Trigger: AACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCT...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTCAAGGGAAGTAAGTaGACTTCTGTCAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFFKGSK*TSVNSH
Trigger: ATGGGAATTGACAGAAGTTCACTTACTTCCCTTGAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTTGGGTTGGTTGTATaGTTCAGCCATCATGCTAAT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFFGLVV*FSHHAN
Trigger: ATTAGCATGATGGCTGAATCATACAACCAACCCAAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFLCDAL*IIFTRK
Trigger: TTTTCTGGTGAAGATAATGCACAGCGCATCACACAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTAAACATCTCTCTGGTTaGTTTTTGGGAACCATCTCA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFKHLSG*FLGTIS
Trigger: TGAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTT...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTGTAACCGAGTGAATTaGTCTCAAACTCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLCNRVN*SQTLAV
Trigger: AACAGCCAGAGTTTGAGAGCAATTCACTCGGTTACA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTATGCTGAACAATGAATaGACTGAGACTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFMLNNE*TETLMA
Trigger: AGCCATTAGAGTCTCAGTCCATTCATTGTTCAGCAT...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTCGGGTTACAGAGTTTTaGACTCTTTTGGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFRVTEF*TLLGIE
Trigger: TTCAATTCCCAAAAGAGTCCAAAACTCTGTAACCCG...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTTTGTTCAGAGGCCGTaGAATGGGTTTTTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLFVQRP*NGFLRF
Trigger: AAACCTCAAAAACCCATTCCACGGCCTCTGAACAAA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTGATTCCTGGAATATATaGCACAATCGCTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFDSWNI*HNRYSN
Trigger: ATTGGAATAGCGATTGTGTCATATATTCCAGGAATC...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGTTTGGGTTGGTTGTATaGTTCAGCCATCATGCTAAT +
Preference number: 4 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKFGLVV*FSHHAN
Trigger: ATTAGCATGATGGCTGAATCATACAACCAACCCAAA...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGAGTCCCTCTGACTGCTaGTTTTACTTACTAACAATG +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLSPSDC*FYLLTM
Trigger: CATTGTTAGTAAGTAAAATCAGCAGTCAGAGGGACT...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR TCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTTTGTTGTTGTTCTCTaGAACATCTGCAATGCTGCA +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLFVVVL*NICNAA
Trigger: TGCAGCATTGCAGATGTTTCAGAGAACAACAACAAA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTAGTGAAGACACACTCTaGAATGTCAGTATTGTTACT +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSEDTL*NVSIVT
Trigger: AGTAACAATACTGACATTGCAGAGTGTGTCTTCACT...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTCCTGAAGATCAATGGTaGTACATTCTGATAGTATAC +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFPEDQW*YILIVY
Trigger: GTATACTATCAGAATGTAGCACCATTGATCTTCAGG...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR GCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGAAACATCTGCAATGCTaGAGTAGCATTAGGAACCAA +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLKHLQC*SSIRNQ
Trigger: TTGGTTCCTAATGCTACTGCAGCATTGCAGATGTTT...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGGGTACTTCTCCTGTCTaGTCTTTAGACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKGTSPV*SLDFFF
Trigger: GAAAAAGAAGTCTAAAGACCAGACAGGAGAAGTACC...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTCATCCTGAAGATCAATaGTGCTACATTCTGATAGTA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFHPEDQ*CYILIV
Trigger: TACTATCAGAATGTAGCACCATTGATCTTCAGGATG...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGATTGCTCTCAAACTCTaGCTGTTGTTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLIALKL*LLFFLC
Trigger: ACAGAGAAAGAACAACAGCCAGAGTTTGAGAGCAAT...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTCCAGTCTTAAAGGATaGTGTCATAAGGATCTACAA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSSLKG*CHKDLQ
Trigger: TTGTAGATCCTTATGACACCATCCTTTAAGACTGGA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTACATTCATATTGTATaGAACAGGCACTGTTACCCA +
Preference number: 4 (lower is better)
Translates to: QCCSSIRNQNILIQYICLYIHIV*NRHCYP
Trigger: TGGGTAACAGTGCCTGTTCCATACAATATGAATGTA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CCA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGCATCCTGAAGATCAATaGTGCTACATTCTGATAGTA +
Preference number: 4 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKHPEDQ*CYILIV
Trigger: TACTATCAGAATGTAGCACCATTGATCTTCAGGATG...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CCA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTCTACATTAACATCATaGCTTAGAAACCAGAACACA +
Preference number: 4 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSTLTS*LRNQNT
Trigger: TGTGTTCTGGTTTCTAAGCCATGATGTTAATGTAGA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS CCA 90 bp GCCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTGCAGGTATaGAAGCCCGGTTCCTCGGTCTTCCGGACGCGGCCGGCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: AHHRQNTAGRRKVQV*KPGSSVFRTRPAAP
Trigger: CGGAGCTGCCGGCCGCGTCCGGAAGACCGAGGAACCGGGCTTCCATACCTGCACTTTCCTCCGCCCTGCTGTGTTCTGCCGGTGATGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674755.1
CDS TCA 90 bp GGGAAAGGGGCAGGACATCCTCCCGCTCTGAGCCACCTCCGGAAGTaGCGTCGGAGTGTCAACATGCAAGATGGCGGCCCATCACCGGCA +
Preference number: 5 (lower is better)
Translates to: GKGAGHPPALSHLRK*RRSVNMQDGGPSPA
Trigger: TGCCGGTGATGGGCCGCCATCTTGCATGTTGACACTCCGACGTCACTTCCGGAGGTGGCTCAGAGCGGGAGGATGTCCTGCCCCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674755.1
CDS TCA 90 bp GCTGACCCCTGGAGCTCAGAGGCTGAAGGCAAGGCTGTGAAGCTATaGGGTAGGCGTGGAGGTGAGGGCTCAGTCACAGTGGACCTTGCC +
Preference number: 5 (lower is better)
Translates to: ADPWSSEAEGKAVKL*GRRGGEGSVTVDLA
Trigger: GGCAAGGTCCACTGTGACTGAGCCCTCACCTCCACGCCTACCTCATAGCTTCACAGCCTTGCCTTCAGCCTCTGAGCTCCAGGGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000668754.1
CDS CCA 90 bp GCAAGTCTCTCAGCAGAGTTCGAGCTTCTGCTCCTGGCAGCTGCCTaGAGCCCTTCTGGGAGGAGCGGCTTGGAGGAGGGTGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: ASLSAEFELLLLAAA*SPSGRSGLEEGVHL
Trigger: CAAATGGACACCCTCCTCCAAGCCGCTCCTCCCAGAAGGGCTCCAGGCAGCTGCCAGGAGCAGAAGCTCGAACTCTGCTGAGAGACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000665106.1
ENST00000668754.1
CDS CCA 90 bp TCTGAGCCACCTCCGGAAGTGACGTCGGAGTGTCAACATGCAAGATaGCGGCCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTGC +
Preference number: 5 (lower is better)
Translates to: SEPPPEVTSECQHAR*RPITGRTQQGGGKC
Trigger: GCACTTTCCTCCGCCCTGCTGTGTTCTGCCGGTGATGGGCCGCCATCTTGCATGTTGACACTCCGACGTCACTTCCGGAGGTGGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674755.1
CDS-3UTR CAA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAACAGGGAGGCTTTCTCTaGTCCACGCTACAGCATGGA +
Preference number: 5 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQQGGFL*STLQHG
Trigger: TCCATGCTGTAGCGTGGACAAGAGAAAGCCTCCCTG...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS TCA 90 bp ACTAAGCTGCTGACCCCTGGAGCTCAGAGGCTGAAGGCAAGGCTGTaGAGCTATGAGGTAGGCGTGGAGGTGAGGGCTCAGTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: TKLLTPGAQRLKARL*SYEVGVEVRAQSQW
Trigger: CCACTGTGACTGAGCCCTCACCTCCACGCCTACCTCATAGCTTCACAGCCTTGCCTTCAGCCTCTGAGCTCCAGGGGTCAGCAGCTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000668754.1
CDS-3UTR CAA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAACAATCCGCTTCTCAATaGCAGCCAGAGAGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQQSASQ*QPESRK
Trigger: CTTCCGACTCTCTGGCTGCAATTGAGAAGCGGATTG...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAAAGTACGCAGGGTCTGTaGATAAAGCTTCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQSTQGL*IKLLPG
Trigger: TCCTGGGAGAAGCTTTATCAACAGACCCTGCGTACT...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCTTGTTCAGGCTCAGGTaGTGTGATGCGCTGTGCATT +
Preference number: 5 (lower is better)
Translates to: VLIPRAARTSLRIRPIRALFRLR*CDALCI
Trigger: AATGCACAGCGCATCACACAACCTGAGCCTGAACAA...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAAGTCAATTTCCACACTTaGAACTCTCTGGCTCGTGGG +
Preference number: 5 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQVNFHT*NSLARG
Trigger: CCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGAC...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCCAGTGGACCTTGCCCTaGGCCACCCCAAAGCTAGAC +
Preference number: 5 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAIQWTLP*ATPKLD
Trigger: GTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCACTG...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS GCA 90 bp CCAAGCAGGAGACACTGCAGGCACAAATGCACAGAGTGGGGACTCTaGTCCCCATTCAGTGGCCAATCACATCTTTCTTCCGTCTCCGCT +
Preference number: 5 (lower is better)
Translates to: PSRRHCRHKCTEWGL*SPFSGQSHLSSVSA
Trigger: AGCGGAGACGGAAGAAAGATGTGATTGGCCACTGAATGGGGAGCAGAGTCCCCACTCTGTGCATTTGTGCCTGCAGTGTCTCCTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676333.1
CDS-3UTR CAA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAGTAGAAGACCAATGTaGAACAGAGAAGGAAGCGAC +
Preference number: 5 (lower is better)
Translates to: VLIPRAARTSLRIRPIRASRRPM*NREGSD
Trigger: GTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTACT...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS CCA 90 bp CACACGAAGCTGAAGCTGCCTGGGGAACCTGACTTCTTGGTAAGGTaGCTCCAGACAGCAATCCCAGCGATACTTCTTGAAGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: HTKLKLPGEPDFLVR*LQTAIPAILLEALH
Trigger: GTGGAGAGCTTCAAGAAGTATCGCTGGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGGTTCCCCAGGCAGCTTCAGCTTCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000665106.1
CDS-3UTR CAA 90 bp CATCATCAGAGCAAAGAGGAGAGTCCTGATTCCTCGTGCAGCCCGGACAAGCCTGTCGAACACGAGACCTaGACATTTGTTCAGAGGCCG +
Preference number: 5 (lower is better)
Translates to: HHQSKEESPDSSCSPDKPVEHET*TFVQRP
Trigger: CGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGAC...AGGCTTGTCCGGGCTGCACGAGGAATCAGGACTCTCCTCTTTGCTCTGATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAACTTCTTGAGAGGATaGGCTTCCATGAACTTCTCT +
Preference number: 5 (lower is better)
Translates to: VLIPRAARTSLRIRPIRANFLRG*ASMNFS
Trigger: AGAGAAGTTCATGGAAGCCAATCCTCTCAAGAAGTT...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGCAGTGGACCTTGCCCTaGGCCACCCCAAAGCTAGAC +
Preference number: 5 (lower is better)
Translates to: IYLALRHAKAQARHQQSQQWTLP*ATPKLD
Trigger: GTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCACTG...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGCAGTCACAGTGGACCTaGCCCTTGGCCACCCCAAAG +
Preference number: 5 (lower is better)
Translates to: HVNFHTLNSLARGLLVLLQSQWT*PLATPK
Trigger: CTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACTG...CAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS GCA 90 bp CAATGTGGCCAGCATCCATTAAGGCAGATATGTTGCAGGATGGCATaGATCATTAGCTACTGGGTAAGACTGGGGGTGCCCCTGATGGTC +
Preference number: 5 (lower is better)
Translates to: QCGQHPLRQICCRMA*IISYWVRLGVPLMV
Trigger: GACCATCAGGGGCACCCCCAGTCTTACCCAGTAGCTAATGATGCATGCCATCCTGCAACATATCTGCCTTAATGGATGCTGGCCACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CCA 90 bp TGCAGCCAGAGAGTCGGAAGTGAAGGGGCGGAAATTCCGCTCATCTaGAAAGATTACTGGGTAGCATCTGTCATCCATCTTCACCCGAGA +
Preference number: 5 (lower is better)
Translates to: CSQRVGSEGAEIPLI*KDYWVASVIHLHPR
Trigger: TCTCGGGTGAAGATGGATGACAGATGCTACCCAGTAATCTTTCCAGATGAGCGGAATTTCCGCCCCTTCACTTCCGACTCTCTGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000665106.1
CDS CCA 90 bp TGCAGCCAGAGAGTCGGAAGTGAAGGGGCGGAAATTCCGCTCATCTaGAAAGATTACTGGGTAGCATCTGTCATCCATCTTCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: CSQRVGSEGAEIPLI*KDYWVASVIHLHPQ
Trigger: CTGAGGGTGAAGATGGATGACAGATGCTACCCAGTAATCTTTCCAGATGAGCGGAATTTCCGCCCCTTCACTTCCGACTCTCTGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444237.2
ENST00000668754.1
CDS CCA 90 bp AAGCACCAGCCTTCCAGGGTCTTCCAATCTGACTTCTTGGTAAGGTaGCTCCAGACAGCAATCCCAGCGATACTTCTTGAAGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: KHQPSRVFQSDFLVR*LQTAIPAILLEALH
Trigger: GTGGAGAGCTTCAAGAAGTATCGCTGGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGATTGGAAGACCCTGGAAGGCTGGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS-3UTR CAA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCAGTACGCAGGGTCTGTaGATAAAGCTTCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVSTQGL*IKLLPG
Trigger: TCCTGGGAGAAGCTTTATCAACAGACCCTGCGTACT...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAATTCTTGGCCAGCTTCTCTTTaGAAGTACACAGTTCATTAC +
Preference number: 5 (lower is better)
Translates to: CSPDKPQDSANPSQADNSWPASL*KYTVHY
Trigger: GTAATGAACTGTGTACTTCAAAAGAGAAGCTGGCCA...AGAATTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCGAGCTCATAGGCCTGTaGTTCAGGCTCAGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: FHTLNSLARGLLVLLMELELIGL*FRLRLC
Trigger: ACACAACCTGAGCCTGAACAACAGGCCTATGAGCTC...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CAA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCGTCAATTTCCACACTTaGAACTCTCTGGCTCGTGGG +
Preference number: 5 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVVNFHT*NSLARG
Trigger: CCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGAC...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCAGGGAGGCTTTCTCTaGTCCACGCTACAGCATGGA +
Preference number: 5 (lower is better)
Translates to: DILLKAQSRVGHGALYRGQGGFL*STLQHG
Trigger: TCCATGCTGTAGCGTGGACAAGAGAAAGCCTCCCTG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCGCACCTATGAGAGCATaGACCACCACCTTCATTCCT +
Preference number: 5 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAIAPMRA*TTTFIP
Trigger: AGGAATGAAGGTGGTGGTCAATGCTCTCATAGGTGC...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCAAGCGGACAATCTTCAGTGGCTGTATaGAAGTTCTCTAAAATCACA +
Preference number: 5 (lower is better)
Translates to: LVQPGQASGFGQSEPSGQSSVAV*KFSKIT
Trigger: TGTGATTTTAGAGAACTTCAATACAGCCACTGAAGA...TTGTCCGCTTGGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTCCTGATTCCTCGTGCAGCCCGGACAAGCCTCAGGATTCGGCCAATCCGAGCCTCTTCAGTGGCTGTATaGAAGTTCTCTAAAATCACA +
Preference number: 5 (lower is better)
Translates to: VLIPRAARTSLRIRPIRASSVAV*KFSKIT
Trigger: TGTGATTTTAGAGAACTTCAATACAGCCACTGAAGA...GGCTCGGATTGGCCGAATCCTGAGGCTTGTCCGGGCTGCACGAGGAATCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS TCA 90 bp TTTGGATGGCAATCCGCTTCTCAATTGCAGCCAGAGAGTCGGAAGTaGAGGGGCGGAAATTCCGCTCATCTGGAAAGATTACTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: FGWQSASQLQPESRK*RGGNSAHLERLLGS
Trigger: GCTACCCAGTAATCTTTCCAGATGAGCGGAATTTCCGCCCCTTCACTTCCGACTCTCTGGCTGCAATTGAGAAGCGGATTGCCATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000302328.9
ENST00000444237.2
ENST00000456224.7
ENST00000665106.1
ENST00000668754.1
ENST00000675223.1
ENST00000675672.1
ENST00000675892.1
ENST00000676045.1
ENST00000676176.1
CDS TCA 90 bp GCCTCCTCACTTGGAGAGCTACACACCCCCTTCTACATGTCTGACTaGCTTAGGCCCTTGCTTCAAAGTGGGACAATTCTGTGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: ASSLGELHTPFYMSD*LRPLLQSGTILWCN
Trigger: ATTGCACCACAGAATTGTCCCACTTTGAAGCAAGGGCCTAAGTCAGTCAGACATGTAGAAGGGGGTGTGTAGCTCTCCAAGTGAGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS TCA 90 bp GGTGGAAGTGATGAAGGGTCAACAAAAGTCTGCCTGGTTCTCCTGTaGTGCTCACTCTGGGGGAAAGCCAGCCTCCATATAAGAACTCCA +
Preference number: 5 (lower is better)
Translates to: GGSDEGSTKVCLVLL*CSLWGKASLHIRTP
Trigger: TGGAGTTCTTATATGGAGGCTGGCTTTCCCCCAGAGTGAGCATCACAGGAGAACCAGGCAGACTTTTGTTGACCCTTCATCACTTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS-3UTR CAA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAACAATCCGCTTCTCAATaGCAGCCAGAGAGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: ADNSEERRRERNVLLIFQQSASQ*QPESRK
Trigger: CTTCCGACTCTCTGGCTGCAATTGAGAAGCGGATTG...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTCTGCAGCTACATTCTaGTTCTGCTCCTCATATGCC +
Preference number: 5 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAISAATF*FCSSYA
Trigger: GGCATATGAGGAGCAGAACAAGAATGTAGCTGCAGA...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCTTCCACACGAGGTACTaGGATGCCAGGTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: FHTLNSLARGLLVLLMELFHTRY*DARFSP
Trigger: TGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGAA...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGCCAAGAAGACAGTGTaGATGATGATGCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: AIRATEYPSGEGEKNIHAAKKTV*MMMQMV
Trigger: CACCATCTGCATCATCATCAACACTGTCTTCTTGGC...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGGAGCTCATAGGCCTGTaGTTCAGGCTCAGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILELIGL*FRLRLC
Trigger: ACACAACCTGAGCCTGAACAACAGGCCTATGAGCTC...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGAGCTCATAGGCCTGTaGTTCAGGCTCAGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: ADNSEERRRERNVLLIFQELIGL*FRLRLC
Trigger: ACACAACCTGAGCCTGAACAACAGGCCTATGAGCTC...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675223.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGGTCGAACACGAGACCTaGACATTTGTTCAGAGGCCG +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILVEHET*TFVQRP
Trigger: CGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGAC...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp GCTTTCATACTATCTAGGCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGGACTCTGGATTCACTTaGGAAAACCAGTTCATACCC +
Preference number: 5 (lower is better)
Translates to: AFILSRPSEPPSTLAVKADSGFT*ENQFIP
Trigger: GGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTC...CGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGCCTAGATAGTATGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCCAGTCACAGTGGACCTaGCCCTTGGCCACCCCAAAG +
Preference number: 5 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFQSQWT*PLATPK
Trigger: CTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACTG...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATTTCAGTCACAGTGGACCTaGCCCTTGGCCACCCCAAAG +
Preference number: 5 (lower is better)
Translates to: FGDPVWSDEAHLQRTCQFQSQWT*PLATPK
Trigger: CTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACTG...AAATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS TCA 90 bp GATGCAAAGGGATATAAAGCACCAGCCTTCCAGGGTCTTCCAATCTaGCTTCTTGGTAAGGTGGCTCCAGACAGCAATCCCAGCGATACT +
Preference number: 5 (lower is better)
Translates to: DAKGYKAPAFQGLPI*LLGKVAPDSNPSDT
Trigger: AGTATCGCTGGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGATTGGAAGACCCTGGAAGGCTGGTGCTTTATATCCCTTTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS GCA 90 bp CCACAGATCCTCAGAAAGGCCTCAGGAGGCGGGAATAAAACAGCCTaGCCTAGGATTCCAGTCTTAAAGGATGGTGTCATAAGGATCTAC +
Preference number: 5 (lower is better)
Translates to: PQILRKASGGGNKTA*PRIPVLKDGVIRIY
Trigger: GTAGATCCTTATGACACCATCCTTTAAGACTGGAATCCTAGGGCAGGCTGTTTTATTCCCGCCTCCTGAGGCCTTTCTGAGGATCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444237.2
ENST00000668754.1
CDS GCA 90 bp AAGAAGCCATCCTTGATGCCTCTAAAGCACAGCAGTGCCTCTCCCTaGTACCACTTTCACACGACCAATCTCACTAAAGAAGTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: KKPSLMPLKHSSASP*YHFHTTNLTKEVAC
Trigger: GCAGGCAACTTCTTTAGTGAGATTGGTCGTGTGAAAGTGGTAGCAGGGAGAGGCACTGCTGTGCTTTAGAGGCATCAAGGATGGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS GCA 90 bp GAGAGCTACACACCCCCTTCTACATGTCTGACTGACTTAGGCCCTTaGTTCAAAGTGGGACAATTCTGTGGTGCAATTCATGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: ESYTPPSTCLTDLGP*FKVGQFCGAIHAPE
Trigger: CTCTGGAGCATGAATTGCACCACAGAATTGTCCCACTTTGAAGCAAGGGCCTAAGTCAGTCAGACATGTAGAAGGGGGTGTGTAGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS-3UTR CAA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGCCATGAACACGCAGTaGATGATAACGGTGCCGATA +
Preference number: 5 (lower is better)
Translates to: DILLKAQSRVGHGALYRGAMNTQ*MITVPI
Trigger: TATCGGCACCGTTATCATCAACTGCGTGTTCATGGC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTTTCTGGGACAGTCGTTaGGTTTGCTCTAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: DILLKAQSRVGHGALYRGFWDSR*VCSRSC
Trigger: ACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGAA...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATTTCTGGGACAGTCGTTaGGTTTGCTCTAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHFWDSR*VCSRSC
Trigger: ACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGAA...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGATGGAGCTCGGACTCTTTTGGGAATaGAAGCTACGGCCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: FHTLNSLARGLLVLLMELGLFWE*KLRPKS
Trigger: GCTTTTTGGCCGTAGCTTCAATTCCCAAAAGAGTCC...GAGCTCCATCAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCAAGGCAATGAAGAGGTaGAGCACCACAAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAIKAMKR*STTSFP
Trigger: AGGAAAACTTGTGGTGCTCAACCTCTTCATTGCCTT...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGGTCAATTTCCACACTTaGAACTCTCTGGCTCGTGGG +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILVNFHT*NSLARG
Trigger: CCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGAC...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp CTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGCAAACATCTCTCTGGTaGCTTTTTGGGAACCATCTC +
Preference number: 5 (lower is better)
Translates to: LALGHPKARQVSIAKSLEQTSLW*LFGNHL
Trigger: GAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTTG...CTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCAGCAACCAAAGCCTTaGGGCAAACATCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILQQPKP*GKHLSG
Trigger: ACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATCAGCAACCAAAGCCTTaGGGCAAACATCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHQQPKP*GKHLSG
Trigger: ACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTG...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTCAGGGAGGCTTTCTCTaGTCCACGCTACAGCATGGA +
Preference number: 5 (lower is better)
Translates to: TCQFPHFELSGSWASCSPQGGFL*STLQHG
Trigger: TCCATGCTGTAGCGTGGACAAGAGAAAGCCTCCCTG...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCTTAAATGTTGCCACTaGCAGCAGAGCGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILLKCCH*QQSEVS
Trigger: GCTTACCTCGCTCTGCTGCAAGTGGCAACATTTAAG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATCTTAAATGTTGCCACTaGCAGCAGAGCGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHLKCCH*QQSEVS
Trigger: GCTTACCTCGCTCTGCTGCAAGTGGCAACATTTAAG...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCACTTAAATGTTGCCACTaGCAGCAGAGCGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSLKCCH*QQSEVS
Trigger: GCTTACCTCGCTCTGCTGCAAGTGGCAACATTTAAG...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TGGACCTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCGATATTTATTTGGCTTaGCGACACGCAAAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: WTLPLATPKLDKSPLQRVDIYLA*RHAKAQ
Trigger: CTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC...GACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCGTTTTCCAAGTCATTTaGGTCACCTTGGTCACCCTT +
Preference number: 5 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAIVFQVI*VTLVTL
Trigger: AAGGGTGACCAAGGTGACCAAAATGACTTGGAAAAC...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS TCA 90 bp TCCAGTCTTAAAGGATGGTGTCATAAGGATCTACAAAAGCTGAGCTaGGGTCAGGGGCCTTGGGAGCTGATTGGCTGTGAAGATCAGAAG +
Preference number: 5 (lower is better)
Translates to: SSLKGWCHKDLQKLS*GQGPWELIGCEDQK
Trigger: CTTCTGATCTTCACAGCCAATCAGCTCCCAAGGCCCCTGACCTCAGCTCAGCTTTTGTAGATCCTTATGACACCATCCTTTAAGACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444237.2
ENST00000668754.1
CDS GCA 90 bp GAACATGCTGAACAATGTGGCCAGCATCCATTAAGGCAGATATGTTaGAGGATGGCATGCATCATTAGCTACTGGGTAAGACTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: EHAEQCGQHPLRQIC*RMACIISYWVRLGV
Trigger: CACCCCCAGTCTTACCCAGTAGCTAATGATGCATGCCATCCTGCAACATATCTGCCTTAATGGATGCTGGCCACATTGTTCAGCATGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS-3UTR CAA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAATCCGCTTCTCAATaGCAGCCAGAGAGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: DIYLALRHAKAQARHQQSQSASQ*QPESRK
Trigger: CTTCCGACTCTCTGGCTGCAATTGAGAAGCGGATTG...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCATCAGTATTGTTACTGTaGCTGTTTTTAGCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: AIRATEYPSGEGEKNIHASVLLL*LFLAGP
Trigger: AGGGCCTGCTAAAAACAGCAACAGTAACAATACTGA...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCGCAGGGGCAATAGTTaGATGGTGATTCCTGGAATA +
Preference number: 5 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTRRGNS*MVIPGI
Trigger: TATTCCAGGAATCACCATCAAACTATTGCCCCTGCG...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATCGCAGGGGCAATAGTTaGATGGTGATTCCTGGAATA +
Preference number: 5 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHRRGNS*MVIPGI
Trigger: TATTCCAGGAATCACCATCAAACTATTGCCCCTGCG...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCTCTGCAGCTACATTCTaGTTCTGCTCCTCATATGCC +
Preference number: 5 (lower is better)
Translates to: QADNSEERRRERNVLLIFSAATF*FCSSYA
Trigger: GGCATATGAGGAGCAGAACAAGAATGTAGCTGCAGA...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGGCCAAGAAGACAGTGTaGATGATGATGCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILAKKTV*MMMQMV
Trigger: CACCATCTGCATCATCATCAACACTGTCTTCTTGGC...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTGAGTTTTGGACTCTTTaGGGAATTGAAGCTACGGCC +
Preference number: 5 (lower is better)
Translates to: DILLKAQSRVGHGALYRGEFWTL*GIEATA
Trigger: GGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACTC...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp ATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGGTCAATTTCCACACTTaGAACTCTCTGGCTCGTGGG +
Preference number: 5 (lower is better)
Translates to: IYLALRHAKAQARHQQSQVNFHT*NSLARG
Trigger: CCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGAC...CTGACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGCTCTCTGGTTGCTTTTaGGGAACCATCTCAGGTAAC +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILLSGCF*GTISGN
Trigger: GTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGAG...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp GTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCACCTTGGTCACCCTTGGTCACTCTCTGGTTGCTTTTaGGGAACCATCTCAGGTAAC +
Preference number: 5 (lower is better)
Translates to: VNEARFPSHFGHLGHPWSLSGCF*GTISGN
Trigger: GTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGAG...TGACCAAGGGTGACCAAGGTGACCAAAATGACTTGGAAAACGGGCCTCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCAGGGAGGCTTTCTCTaGTCCACGCTACAGCATGGA +
Preference number: 5 (lower is better)
Translates to: GGDYGFIQLLERIGFHELQGGFL*STLQHG
Trigger: TCCATGCTGTAGCGTGGACAAGAGAAAGCCTCCCTG...AAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CTTGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGGAGTTCTTGGATTTTGGGTaGGTTCTCAAGGTGAACATC +
Preference number: 5 (lower is better)
Translates to: LALGHPKARQVSIAKSLEFLDFG*VLKVNI
Trigger: GATGTTCACCTTGAGAACCAACCCAAAATCCAAGAA...CTCCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCACCCACATTGTCAAAGTaGACTTTCTGGTTGATCCAA +
Preference number: 5 (lower is better)
Translates to: AIRATEYPSGEGEKNIHAPTLSK*TFWLIQ
Trigger: TTGGATCAACCAGAAAGTCAACTTTGACAATGTGGG...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CATCTTCAGAGAACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTGTCGAACACGAGACCTaGACATTTGTTCAGAGGCCG +
Preference number: 5 (lower is better)
Translates to: HLQRTCQFPHFELSGSWAVEHET*TFVQRP
Trigger: CGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGAC...AGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGTTCTCTGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAGTCGAACACGAGACCTaGACATTTGTTCAGAGGCCG +
Preference number: 5 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQVEHET*TFVQRP
Trigger: CGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGAC...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCCTTTCGAAAGGCCTTTaGAATAATAGCAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAILSKGL*NNSSTS
Trigger: AGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAAG...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCTAGACAAGTCTCCATaGCAAAGAGTCTGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTLDKSP*QRVWSG
Trigger: ACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAG...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS CCA 90 bp AAGATCAGAAGAGATGACCACCACTGTGGGTATAGCAGGAACTTTTaGCATAGACAAAACCAAAGCAGGGCATCATTCCTGGAGGACCGA +
Preference number: 5 (lower is better)
Translates to: KIRRDDHHCGYSRNF*HRQNQSRASFLEDR
Trigger: TCGGTCCTCCAGGAATGATGCCCTGCTTTGGTTTTGTCTATGCCAAAAGTTCCTGCTATACCCACAGTGGTGGTCATCTCTTCTGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS-3UTR CAA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTTTCTGGGACAGTCGTTaGGTTTGCTCTAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: HCKESGVVNEARFPSHFGFWDSR*VCSRSC
Trigger: ACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGAA...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGAGGGCTCCGACAGAGTaGCCGATTATCTTAATTAGT +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILRAPTE*PIILIS
Trigger: ACTAATTAAGATAATCGGCAACTCTGTCGGAGCCCT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp GCCATCAGAGCCACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCATCATTGCTAAAGGAATaGAGCAGTAAGGCAATGAAG +
Preference number: 5 (lower is better)
Translates to: AIRATEYPSGEGEKNIHASLLKE*SSKAMK
Trigger: CTTCATTGCCTTACTGCTCAATTCCTTTAGCAATGA...TGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGTGGCTCTGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCAAACATCTCTCTGGTaGCTTTTTGGGAACCATCTC +
Preference number: 5 (lower is better)
Translates to: DILLKAQSRVGHGALYRGQTSLW*LFGNHL
Trigger: GAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTTG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp CTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAATGCACCTATGAGAGCATaGACCACCACCTTCATTCCT +
Preference number: 5 (lower is better)
Translates to: LSGILYGQMRLIFREHVNAPMRA*TTTFIP
Trigger: AGGAATGAAGGTGGTGGTCAATGCTCTCATAGGTGC...ATTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTGCACCTATGAGAGCATaGACCACCACCTTCATTCCT +
Preference number: 5 (lower is better)
Translates to: DIYLALRHAKAQARHQQSAPMRA*TTTFIP
Trigger: AGGAATGAAGGTGGTGGTCAATGCTCTCATAGGTGC...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGATGGCTTTGGGTTGGTaGTATGATTCAGCCATCATG +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILMALGW*YDSAIM
Trigger: CATGATGGCTGAATCATACAACCAACCCAAAGCCAT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTATGGCTTTGGGTTGGTaGTATGATTCAGCCATCATG +
Preference number: 5 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTMALGW*YDSAIM
Trigger: CATGATGGCTGAATCATACAACCAACCCAAAGCCAT...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCAGTAGAAGACCAATGTaGAACAGAGAAGGAAGCGAC +
Preference number: 5 (lower is better)
Translates to: QADNSEERRRERNVLLIFSRRPM*NREGSD
Trigger: GTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTACT...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTGATATTTATTTGGCTTaGCGACACGCAAAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTDIYLA*RHAKAQ
Trigger: CTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CAAGCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCGGTTCATACAACTTCTaGAGAGGATTGGCTTCCATG +
Preference number: 5 (lower is better)
Translates to: QADNSEERRRERNVLLIFGSYNF*RGLASM
Trigger: CATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACC...GAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGGTTCATACAACTTCTaGAGAGGATTGGCTTCCATG +
Preference number: 5 (lower is better)
Translates to: ADNSEERRRERNVLLIFQGSYNF*RGLASM
Trigger: CATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACC...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CTGGCTTGTGACTATGTCGAACACGAGACCTTGACATTTGTTCAGAGGCCGTGGCTTTCGAAAGGCCTTTaGAATAATAGCAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: LACDYVEHETLTFVQRPWLSKGL*NNSSTS
Trigger: AGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAAG...CCACGGCCTCTGAACAAATGTCAAGGTCTCGTGTTCGACATAGTCACAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GCGGACAATTCTGAAGAGCGTCGGAGGGAAAGGAATGTGCTCCTGATTTTCCAAGTTTTCCAAGTCATTTaGGTCACCTTGGTCACCCTT +
Preference number: 5 (lower is better)
Translates to: ADNSEERRRERNVLLIFQVFQVI*VTLVTL
Trigger: AAGGGTGACCAAGGTGACCAAAATGACTTGGAAAAC...TTGGAAAATCAGGAGCACATTCCTTTCCCTCCGACGCTCTTCAGAATTGTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS TCA 90 bp GGAGGGCACTGCGAGGGAATAAATTTGGTTTGCAACACACGAAGCTaGAGCTGCCTGGGGAACCTTTATTATGGGTCCAAATATAGTACA +
Preference number: 5 (lower is better)
Translates to: GGHCEGINLVCNTRS*SCLGNLYYGSKYST
Trigger: TGTACTATATTTGGACCCATAATAAAGGTTCCCCAGGCAGCTTCAGCTTCGTGTGTTGCAAACCAAATTTATTCCCTCGCAGTGCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS TCA 90 bp GGGCCTTTAACATCCTGCAGACCTCAAGCTCTCAGATGCTCTCACTaGAGATCTACCTCATTATATTTCAGATCACAGCATACATCCCCG +
Preference number: 5 (lower is better)
Translates to: GPLTSCRPQALRCSH*RSTSLYFRSQHTSP
Trigger: CGGGGATGTATGCTGTGATCTGAAATATAATGAGGTAGATCTTCAGTGAGAGCATCTGAGAGCTTGAGGTCTGCAGGATGTTAAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674979.1
CDS GCA 90 bp AACATCAGACTTCTGTTGTTCAGGCTCAGGTTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAATTCAACGTCATCTTCCTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: NIRLLLFRLRLCDAL*IIFTRKFNVIFLLR
Trigger: GCGGAGGAGGAAGATGACGTTGAATTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGAAGTCTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456224.7
CDS-3UTR CAA 90 bp ACCGAGTACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCCAGATGCCACACATTTaGAATTCAGGTGAATTTTCT +
Preference number: 5 (lower is better)
Translates to: TEYPSGEGEKNIHAVEAIQMPHI*NSGEFS
Trigger: AGAAAATTCACCTGAATTCAAAATGTGTGGCATCTG...GATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTACTCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCTTCTGGGACAGTCGTTaGGTTTGCTCTAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFFWDSR*VCSRSC
Trigger: ACAGCTCCTAGAGCAAACCAAACGACTGTCCCAGAA...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTTTCCACACGAGGTACTaGGATGCCAGGTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GGDYGFIQLLERIGFHELFHTRY*DARFSP
Trigger: TGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGAA...AAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACGCCAAGAAGACAGTGTaGATGATGATGCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNAKKTV*MMMQMV
Trigger: CACCATCTGCATCATCATCAACACTGTCTTCTTGGC...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TACCCTAGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTTGGCCAGCTTCTCTTTaGAAGTACACAGTTCATTAC +
Preference number: 5 (lower is better)
Translates to: YPSGEGEKNIHAVEAIFTWPASL*KYTVHY
Trigger: GTAATGAACTGTGTACTTCAAAAGAGAAGCTGGCCA...AGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCTAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp AGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATAGGGCTCCGACAGAGTaGCCGATTATCTTAATTAGT +
Preference number: 5 (lower is better)
Translates to: SLHCKESGVVNEARFPSHRAPTE*PIILIS
Trigger: ACTAATTAAGATAATCGGCAACTCTGTCGGAGCCCT...ATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTGAGTTTTGGACTCTTTaGGGAATTGAAGCTACGGCC +
Preference number: 5 (lower is better)
Translates to: HCKESGVVNEARFPSHFGEFWTL*GIEATA
Trigger: GGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACTC...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAGAGTTTTGGACTCTTTaGGGAATTGAAGCTACGGCC +
Preference number: 5 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQEFWTL*GIEATA
Trigger: GGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACTC...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CTTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTTGTTCAGGCTCAGGTaGTGTGATGCGCTGTGCATT +
Preference number: 5 (lower is better)
Translates to: LGFWVGSQGEHLQISVPHLFRLR*CDALCI
Trigger: AATGCACAGCGCATCACACAACCTGAGCCTGAACAA...GTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCTCTCTGGTTGCTTTTaGGGAACCATCTCAGGTAAC +
Preference number: 5 (lower is better)
Translates to: DIYLALRHAKAQARHQQSLSGCF*GTISGN
Trigger: GTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGAG...ACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCATTTTGGTCTCTCTGGTTGCTTTTaGGGAACCATCTCAGGTAAC +
Preference number: 5 (lower is better)
Translates to: HCKESGVVNEARFPSHFGLSGCF*GTISGN
Trigger: GTTACCTGAGATGGTTCCCAAAAAGCAACCAGAGAG...ACCAAAATGACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTCAAACATCTCTCTGGTaGCTTTTTGGGAACCATCTC +
Preference number: 5 (lower is better)
Translates to: TSLHCKESGVVNEARFPSQTSLW*LFGNHL
Trigger: GAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTTG...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTGCTCACAGCAACCAAAGCCTTaGGGCAAACATCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: FWVGSQGEHLQISVPHCSQQPKP*GKHLSG
Trigger: ACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTG...TGAGCAGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GATATACTCTTGAAAGCCCAATCTAGAGTGGGCCATGGGGCCTTGTATAGGGGTCCCACATTGTCAAAGTaGACTTTCTGGTTGATCCAA +
Preference number: 5 (lower is better)
Translates to: DILLKAQSRVGHGALYRGPTLSK*TFWLIQ
Trigger: TTGGATCAACCAGAAAGTCAACTTTGACAATGTGGG...ACCCCTATACAAGGCCCCATGGCCCACTCTAGATTGGGCTTTCAAGAGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp ACAAGTCTCCATTGCAAAGAGTCTGGAGTGGTGAATGAGGCCCGTTTTCCAAGTATGGCTTTGGGTTGGTaGTATGATTCAGCCATCATG +
Preference number: 5 (lower is better)
Translates to: TSLHCKESGVVNEARFPSMALGW*YDSAIM
Trigger: CATGATGGCTGAATCATACAACCAACCCAAAGCCAT...ACTTGGAAAACGGGCCTCATTCACCACTCCAGACTCTTTGCAATGGAGACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GGAAAGCAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTTGGGAAGTAGAAGACCAATGTaGAACAGAGAAGGAAGCGAC +
Preference number: 5 (lower is better)
Translates to: GKQQPKPLGKHLSGCFLGSRRPM*NREGSD
Trigger: GTCGCTTCCTTCTCTGTTCAACATTGGTCTTCTACT...TCCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTGCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp AGCGGTGAAGGCGAAAAGAATATCCATGCAGTGGAGGCGATCTTCACTCACCATCTTTCGAAAGGCCTTTaGAATAATAGCAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: SGEGEKNIHAVEAIFTHHLSKGL*NNSSTS
Trigger: AGAGGTGCTGCTATTATTCAAAAGGCCTTTCGAAAG...ATGGTGAGTGAAGATCGCCTCCACTGCATGGATATTCTTTTCGCCTTCACCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS GCA 90 bp ATATTCAAAGTGCTGTTGTTCAGGCTCAGGTTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAATTCAACGTCATCTTCCTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: IFKVLLFRLRLCDAL*IIFTRKFNVIFLLR
Trigger: GCGGAGGAGGAAGATGACGTTGAATTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGCACTTTGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675672.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGGTGCTTACATTCATATaGTATGGAACAGGCACTGTT +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILVLTFI*YGTGTV
Trigger: AACAGTGCCTGTTCCATACAATATGAATGTAAGCAC...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCGGACTCTTTTGGGAATaGAAGCTACGGCCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFGLFWE*KLRPKS
Trigger: GCTTTTTGGCCGTAGCTTCAATTCCCAAAAGAGTCC...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTGAGTTTTGGACTCTTTaGGGAATTGAAGCTACGGCC +
Preference number: 5 (lower is better)
Translates to: GGDYGFIQLLERIGFHELEFWTL*GIEATA
Trigger: GGCCGTAGCTTCAATTCCCAAAAGAGTCCAAAACTC...AAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGTCATTGCTAAAGGAATaGAGCAGTAAGGCAATGAAG +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILSLLKE*SSKAMK
Trigger: CTTCATTGCCTTACTGCTCAATTCCTTTAGCAATGA...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTTTGTTCAGGCTCAGGTaGTGTGATGCGCTGTGCATT +
Preference number: 5 (lower is better)
Translates to: FLSLGGGDYGFIQLLERILFRLR*CDALCI
Trigger: AATGCACAGCGCATCACACAACCTGAGCCTGAACAA...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAACAGCAACCAAAGCCTTaGGGCAAACATCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKQQPKP*GKHLSG
Trigger: ACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTG...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGTTCTTGGATTTTGGGTaGGTTCTCAAGGTGAACATC +
Preference number: 5 (lower is better)
Translates to: HVNFHTLNSLARGLLVLLFLDFG*VLKVNI
Trigger: GATGTTCACCTTGAGAACCAACCCAAAATCCAAGAA...CAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CGGAAGGTACGCAGGGGCAATAGTTTGATGGTGATTCCTGGAATATATGACACACTCAAACTCTGGCTGTaGTTCTTTCTCTGTGGAATC +
Preference number: 5 (lower is better)
Translates to: RKVRRGNSLMVIPGIYDTLKLWL*FFLCGI
Trigger: GATTCCACAGAGAAAGAACAACAGCCAGAGTTTGAG...TGTGTCATATATTCCAGGAATCACCATCAAACTATTGCCCCTGCGTACCTTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CAA 90 bp ACAGCAGTGCCACAGGGGCACAATAATTGTGATCTGGCACCCATGTGGATTTTGATGGATTTCATGGCTTaGGGTTGGTTGTATGATTCA +
Preference number: 5 (lower is better)
Translates to: TAVPQGHNNCDLAPMWILMDFMA*GWLYDS
Trigger: TGAATCATACAACCAACCCAAAGCCATGAAATCCAT...CAAAATCCACATGGGTGCCAGATCACAATTATTGTGCCCCTGTGGCACTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp CATCTTCAGAGAACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTGACTCTGGATTCACTTaGGAAAACCAGTTCATACCC +
Preference number: 5 (lower is better)
Translates to: HLQRTCQFPHFELSGSWADSGFT*ENQFIP
Trigger: GGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTC...AGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGTTCTCTGAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TGGAAAGCAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTTGGGCTGCTGGCAAAAGTCTaGAAGTTGAATATGTCATCG +
Preference number: 5 (lower is better)
Translates to: WKAATKAFGQTSLWLLFGLLAKV*KLNMSS
Trigger: CGATGACATATTCAACTTCAAGACTTTTGCCAGCAG...CCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTGCTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CGGAAGGTACGCAGGGGCAATAGTTTGATGGTGATTCCTGGAATATATGACACAGGTTCATACAACTTCTaGAGAGGATTGGCTTCCATG +
Preference number: 5 (lower is better)
Translates to: RKVRRGNSLMVIPGIYDTGSYNF*RGLASM
Trigger: CATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACC...TGTGTCATATATTCCAGGAATCACCATCAAACTATTGCCCCTGCGTACCTTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CAA 90 bp ACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGTTTTCCAAGTCATTTaGGTCACCTTGGTCACCCTT +
Preference number: 5 (lower is better)
Translates to: TCQFPHFELSGSWASCSPVFQVI*VTLVTL
Trigger: AAGGGTGACCAAGGTGACCAAAATGACTTGGAAAAC...AGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCACTAGACAAGTCTCCATaGCAAAGAGTCTGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: SIPDSGFTLENQFIPRMALDKSP*QRVWSG
Trigger: ACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAG...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CTTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACCTAGACAAGTCTCCATaGCAAAGAGTCTGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: LGFWVGSQGEHLQISVPHLDKSP*QRVWSG
Trigger: ACCACTCCAGACTCTTTGCAATGGAGACTTGTCTAG...GTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS TCA 90 bp TTAGAAATGTCTTCTAAACAACTCATTTGCTCACCACGAATTATCTaGACTACAACCTCGCCGGGTCGTGGGAGTTCTCCCTTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: LEMSSKQLICSPRII*TTTSPGRGSSPFSH
Trigger: ATGGGAAAAGGGAGAACTCCCACGACCCGGCGAGGTTGTAGTTCAGATAATTCGTGGTGAGCAAATGAGTTGTTTAGAAGACATTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674979.1
CDS CCA 90 bp GTACGGTGGAAAGACATACTGGATACTTTCACTGTGTTCAGCAAATaGATTGAACATGGAGCCAAAAACATGCGAAGCACTGGGACAATC +
Preference number: 5 (lower is better)
Translates to: VRWKDILDTFTVFSK*IEHGAKNMRSTGTI
Trigger: GATTGTCCCAGTGCTTCGCATGTTTTTGGCTCCATGTTCAATCCATTTGCTGAACACAGTGAAAGTATCCAGTATGTCTTTCCACCGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302328.9
ENST00000665106.1
ENST00000668754.1
ENST00000674755.1
ENST00000675269.1
ENST00000676333.1
CDS CCA 90 bp CTGGTAAACAAGATGCCAACTCTAGGGTACGGTGGAAAGACATACTaGATACTTTCACTGTGTTCAGCAAATGGATTGAACATGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LVNKMPTLGYGGKTY*ILSLCSANGLNMEP
Trigger: TGGCTCCATGTTCAATCCATTTGCTGAACACAGTGAAAGTATCCAGTATGTCTTTCCACCGTACCCTAGAGTTGGCATCTTGTTTACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302328.9
ENST00000665106.1
ENST00000668754.1
ENST00000674755.1
ENST00000674979.1
ENST00000675269.1
ENST00000676333.1
CDS-3UTR CAA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATCGCAGGGGCAATAGTTaGATGGTGATTCCTGGAATA +
Preference number: 5 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDRRGNS*MVIPGI
Trigger: TATTCCAGGAATCACCATCAAACTATTGCCCCTGCG...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCAGGGCTCCGACAGAGTaGCCGATTATCTTAATTAGT +
Preference number: 5 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFRAPTE*PIILIS
Trigger: ACTAATTAAGATAATCGGCAACTCTGTCGGAGCCCT...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CTTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACAGGGCTCCGACAGAGTaGCCGATTATCTTAATTAGT +
Preference number: 5 (lower is better)
Translates to: LGFWVGSQGEHLQISVPHRAPTE*PIILIS
Trigger: ACTAATTAAGATAATCGGCAACTCTGTCGGAGCCCT...GTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAGGACTCTTTTGGGAATaGAAGCTACGGCCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKGLFWE*KLRPKS
Trigger: GCTTTTTGGCCGTAGCTTCAATTCCCAAAAGAGTCC...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTAAGGCAATGAAGAGGTaGAGCACCACAAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: GGDYGFIQLLERIGFHELKAMKR*STTSFP
Trigger: AGGAAAACTTGTGGTGCTCAACCTCTTCATTGCCTT...AAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GAAGACACACTCTGCAATGTCAGTATTGTTACTGTTGCTGTTTTTAGCAGGCCCAAGGCAATGAAGAGGTaGAGCACCACAAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: EDTLCNVSIVTVAVFSRPKAMKR*STTSFP
Trigger: AGGAAAACTTGTGGTGCTCAACCTCTTCATTGCCTT...GGGCCTGCTAAAAACAGCAACAGTAACAATACTGACATTGCAGAGTGTGTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CAA 90 bp GGAAAGCAGCAACCAAAGCCTTTGGGCAAACATCTCTCTGGTTGCTTTTTGGGATCATTGCTAAAGGAATaGAGCAGTAAGGCAATGAAG +
Preference number: 5 (lower is better)
Translates to: GKQQPKPLGKHLSGCFLGSLLKE*SSKAMK
Trigger: CTTCATTGCCTTACTGCTCAATTCCTTTAGCAATGA...TCCCAAAAAGCAACCAGAGAGATGTTTGCCCAAAGGCTTTGGTTGCTGCTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCACAAACATCTCTCTGGTaGCTTTTTGGGAACCATCTC +
Preference number: 5 (lower is better)
Translates to: SIPDSGFTLENQFIPRMAQTSLW*LFGNHL
Trigger: GAGATGGTTCCCAAAAAGCAACCAGAGAGATGTTTG...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CATCTTCAGAGAACATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTCCCACATTGTCAAAGTaGACTTTCTGGTTGATCCAA +
Preference number: 5 (lower is better)
Translates to: HLQRTCQFPHFELSGSWAPTLSK*TFWLIQ
Trigger: TTGGATCAACCAGAAAGTCAACTTTGACAATGTGGG...AGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATGTTCTCTGAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGCTTAAATGTTGCCACTaGCAGCAGAGCGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWLKCCH*QQSEVS
Trigger: GCTTACCTCGCTCTGCTGCAAGTGGCAACATTTAAG...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TCGATTCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCACTCAAACTCTGGCTGTaGTTCTTTCTCTGTGGAATC +
Preference number: 5 (lower is better)
Translates to: SIPDSGFTLENQFIPRMALKLWL*FFLCGI
Trigger: GATTCCACAGAGAAAGAACAACAGCCAGAGTTTGAG...TGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGAATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GACCACAAAGACCCAGTTGAGATGGTCAAGGATGGATTTCATGGCTTTGGGTTGACAGCAATGTACATGTaGACAACAATGAGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: DHKDPVEMVKDGFHGFGLTAMYM*TTMRKE
Trigger: CTCCTTTCTCATTGTTGTCAACATGTACATTGCTGT...CAACCCAAAGCCATGAAATCCATCCTTGACCATCTCAACTGGGTCTTTGTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCGATATTTATTTGGCTTaGCGACACGCAAAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFDIYLA*RHAKAQ
Trigger: CTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATATC...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CATGTCAATTTCCACACTTTGAACTCTCTGGCTCGTGGGCTTCTTGTTCTCCTGCAGATGCCACACATTTaGAATTCAGGTGAATTTTCT +
Preference number: 5 (lower is better)
Translates to: HVNFHTLNSLARGLLVLLQMPHI*NSGEFS
Trigger: AGAAAATTCACCTGAATTCAAAATGTGTGGCATCTG...CAGGAGAACAAGAAGCCCACGAGCCAGAGAGTTCAAAGTGTGGAAATTGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TCTTTCGGGGATCCTGTATGGTCAGATGAGGCTCATCTTCAGAGAACATGTCAAGTGCTTACATTCATATaGTATGGAACAGGCACTGTT +
Preference number: 5 (lower is better)
Translates to: SFGDPVWSDEAHLQRTCQVLTFI*YGTGTV
Trigger: AACAGTGCCTGTTCCATACAATATGAATGTAAGCAC...TTGACATGTTCTCTGAAGATGAGCCTCATCTGACCATACAGGATCCCCGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAATTGTGTTGCTTCTGGTCTGCAGCTACATTCTaGTTCTGCTCCTCATATGCC +
Preference number: 5 (lower is better)
Translates to: GISKVRKGRIFDKLCCFWSAATF*FCSSYA
Trigger: GGCATATGAGGAGCAGAACAAGAATGTAGCTGCAGA...CCAGAAGCAACACAATTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CTAATGGCTAAACTTCTGATTGAATTGAAAGGCCCAAAAATGAACAAGGCATGCTTCCACACGAGGTACTaGGATGCCAGGTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LMAKLLIELKGPKMNKACFHTRY*DARFSP
Trigger: TGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGAA...GCATGCCTTGTTCATTTTTGGGCCTTTCAATTCAATCAGAAGTTTAGCCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTCATTGCTAAAGGAATaGAGCAGTAAGGCAATGAAG +
Preference number: 5 (lower is better)
Translates to: VVVTMGSYNFLRGLASMNSLLKE*SSKAMK
Trigger: CTTCATTGCCTTACTGCTCAATTCCTTTAGCAATGA...GTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATCTCAAACTCTGGCTGTaGTTCTTTCTCTGTGGAATC +
Preference number: 5 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDLKLWL*FFLCGI
Trigger: GATTCCACAGAGAAAGAACAACAGCCAGAGTTTGAG...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTATGGCTTTGGGTTGGTaGTATGATTCAGCCATCATG +
Preference number: 5 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTMALGW*YDSAIM
Trigger: CATGATGGCTGAATCATACAACCAACCCAAAGCCAT...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CGGAAGGTACGCAGGGGCAATAGTTTGATGGTGATTCCTGGAATATATGACACAATGGATTTCATGGCTTaGGGTTGGTTGTATGATTCA +
Preference number: 5 (lower is better)
Translates to: RKVRRGNSLMVIPGIYDTMDFMA*GWLYDS
Trigger: TGAATCATACAACCAACCCAAAGCCATGAAATCCAT...TGTGTCATATATTCCAGGAATCACCATCAAACTATTGCCCCTGCGTACCTTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CAA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAGACTCTGGATTCACTTaGGAAAACCAGTTCATACCC +
Preference number: 5 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKDSGFT*ENQFIP
Trigger: GGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTC...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCCTGCTGGCAAAAGTCTaGAAGTTGAATATGTCATCG +
Preference number: 5 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFLLAKV*KLNMSS
Trigger: CGATGACATATTCAACTTCAAGACTTTTGCCAGCAG...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS GCA 90 bp CTAAAATGGTTGTTCAAAGACAGTAAGTTTTGGAGTGAGCTGTTATaGAACAGTAGTAAGCTGGAACAGCTAGGTACAACCCGTGCATCT +
Preference number: 5 (lower is better)
Translates to: LKWLFKDSKFWSELL*NSSKLEQLGTTRAS
Trigger: AGATGCACGGGTTGTACCTAGCTGTTCCAGCTTACTACTGTTGCATAACAGCTCACTCCAAAACTTACTGTCTTTGAACAACCATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS-3UTR CAA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGCAATCCGCTTCTCAATaGCAGCCAGAGAGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: QCCSSIRNQNILIQYICLQSASQ*QPESRK
Trigger: CTTCCGACTCTCTGGCTGCAATTGAGAAGCGGATTG...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp ATATTTATTTGGCTTTGCGACACGCAAAGGCTCAGGCAAGGCATCAGCAAAGTCCAGATGCCACACATTTaGAATTCAGGTGAATTTTCT +
Preference number: 5 (lower is better)
Translates to: IFIWLCDTQRLRQGISKVQMPHI*NSGEFS
Trigger: AGAAAATTCACCTGAATTCAAAATGTGTGGCATCTG...GACTTTGCTGATGCCTTGCCTGAGCCTTTGCGTGTCGCAAAGCCAAATAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCGTGCTTACATTCATATaGTATGGAACAGGCACTGTT +
Preference number: 5 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFVLTFI*YGTGTV
Trigger: AACAGTGCCTGTTCCATACAATATGAATGTAAGCAC...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTGTGCTTACATTCATATaGTATGGAACAGGCACTGTT +
Preference number: 5 (lower is better)
Translates to: GGDYGFIQLLERIGFHELVLTFI*YGTGTV
Trigger: AACAGTGCCTGTTCCATACAATATGAATGTAAGCAC...AAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTAGTACGCAGGGTCTGTaGATAAAGCTTCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSTQGL*IKLLPG
Trigger: TCCTGGGAGAAGCTTTATCAACAGACCCTGCGTACT...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp AACATGCTGAACAATGAATGGACTGAGACTCTAATGGCTAAACTTCTGATTGAAAGTACGCAGGGTCTGTaGATAAAGCTTCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: NMLNNEWTETLMAKLLIESTQGL*IKLLPG
Trigger: TCCTGGGAGAAGCTTTATCAACAGACCCTGCGTACT...TTCAATCAGAAGTTTAGCCATTAGAGTCTCAGTCCATTCATTGTTCAGCATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS-3UTR CAA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTCCACACGAGGTACTaGGATGCCAGGTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFFHTRY*DARFSP
Trigger: TGGAGAAAACCTGGCATCCAAGTACCTCGTGTGGAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp ATTTTGATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATGGGCCAAGAAGACAGTGTaGATGATGATGCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: ILMRHSNVKMTTKTQLRWAKKTV*MMMQMV
Trigger: CACCATCTGCATCATCATCAACACTGTCTTCTTGGC...CCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCATCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATTGGCCAGCTTCTCTTTaGAAGTACACAGTTCATTAC +
Preference number: 5 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDWPASL*KYTVHY
Trigger: GTAATGAACTGTGTACTTCAAAAGAGAAGCTGGCCA...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTGCACCTATGAGAGCATaGACCACCACCTTCATTCCT +
Preference number: 5 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFAPMRA*TTTFIP
Trigger: AGGAATGAAGGTGGTGGTCAATGCTCTCATAGGTGC...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTCCCACATTGTCAAAGTaGACTTTCTGGTTGATCCAA +
Preference number: 5 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIPTLSK*TFWLIQ
Trigger: TTGGATCAACCAGAAAGTCAACTTTGACAATGTGGG...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp GTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTGGCTTCCATGAACTTCACAGCAATGTACATGTaGACAACAATGAGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: VVTMGSYNFLRGLASMNFTAMYM*TTMRKE
Trigger: CTCCTTTCTCATTGTTGTCAACATGTACATTGCTGT...GAAGTTCATGGAAGCCAATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TTGGATTTTGGGTTGGTTCTCAAGGTGAACATCTTCAAATATCAGTGCCCCACTAACTTCTTGAGAGGATaGGCTTCCATGAACTTCTCT +
Preference number: 5 (lower is better)
Translates to: LDFGLVLKVNIFKYQCPTNFLRG*ASMNFS
Trigger: AGAGAAGTTCATGGAAGCCAATCCTCTCAAGAAGTT...AGTGGGGCACTGATATTTGAAGATGTTCACCTTGAGAACCAACCCAAAATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS TCA 90 bp AGTAGTAAGCTGGAACAGCTAGGTACAACCCGTGCATCTGTCCACTaGTGTTCAAGTCATAAATTTCACATGACTTACTCTAACTGCTTT +
Preference number: 5 (lower is better)
Translates to: SSKLEQLGTTRASVH*CSSHKFHMTYSNCF
Trigger: AAAGCAGTTAGAGTAAGTCATGTGAAATTTATGACTTGAACATCAGTGGACAGATGCACGGGTTGTACCTAGCTGTTCCAGCTTACTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS TCA 90 bp GAGCTCATAGGCCTTGCATTAGAAATAATGGAGACCAAAAGGCAGTaGTATGATATATTCAAAGTGCTGTTGTTCAGGCTCAGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: ELIGLALEIMETKRQ*YDIFKVLLFRLRLC
Trigger: ACACAACCTGAGCCTGAACAACAGCACTTTGAATATATCATATCACTGCCTTTTGGTCTCCATTATTTCTAATGCAAGGCCTATGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675672.1
CDS-3UTR CAA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTCTGCAGCTACATTCTaGTTCTGCTCCTCATATGCC +
Preference number: 5 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSAATF*FCSSYA
Trigger: GGCATATGAGGAGCAGAACAAGAATGTAGCTGCAGA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTGGACTCTTTTGGGAATaGAAGCTACGGCCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFGLFWE*KLRPKS
Trigger: GCTTTTTGGCCGTAGCTTCAATTCCCAAAAGAGTCC...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTTGTTCAGGCTCAGGTaGTGTGATGCGCTGTGCATT +
Preference number: 5 (lower is better)
Translates to: QCCSSIRNQNILIQYICLLFRLR*CDALCI
Trigger: AATGCACAGCGCATCACACAACCTGAGCCTGAACAA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp TTCCTTTCTCTTGGTGGTGGTGACTATGGGTTCATACAACTTCTTGAGAGGATTATGGATTTCATGGCTTaGGGTTGGTTGTATGATTCA +
Preference number: 5 (lower is better)
Translates to: FLSLGGGDYGFIQLLERIMDFMA*GWLYDS
Trigger: TGAATCATACAACCAACCCAAAGCCATGAAATCCAT...AATCCTCTCAAGAAGTTGTATGAACCCATAGTCACCACCACCAAGAGAAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CAAAGGCTCAGGCAAGGCATCAGCAAAGTCAGAAAGGGCAGAATATTTGATAAAATGGATTTCATGGCTTaGGGTTGGTTGTATGATTCA +
Preference number: 5 (lower is better)
Translates to: QRLRQGISKVRKGRIFDKMDFMA*GWLYDS
Trigger: TGAATCATACAACCAACCCAAAGCCATGAAATCCAT...TTTATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCTTGCCTGAGCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp TCCAGACTCTGGATTCACTTTGGAAAACCAGTTCATACCCAGAATGGCATAGATACAGCAATGTACATGTaGACAACAATGAGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SRLWIHFGKPVHTQNGIDTAMYM*TTMRKE
Trigger: CTCCTTTCTCATTGTTGTCAACATGTACATTGCTGT...ATCTATGCCATTCTGGGTATGAACTGGTTTTCCAAAGTGAATCCAGAGTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675223.1
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGCGCAGGGGCAATAGTTaGATGGTGATTCCTGGAATA +
Preference number: 5 (lower is better)
Translates to: QCCSSIRNQNILIQYICLRRGNS*MVIPGI
Trigger: TATTCCAGGAATCACCATCAAACTATTGCCCCTGCG...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTCTCAAACTCTGGCTGTaGTTCTTTCTCTGTGGAATC +
Preference number: 5 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFLKLWL*FFLCGI
Trigger: GATTCCACAGAGAAAGAACAACAGCCAGAGTTTGAG...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS CCA 90 bp AGATCTGTGAGTATACTAAAATGGTTGTTCAAAGACAGTAAGTTTTaGAGTGAGCTGTTATGCAACAGTAGTAAGCTGGAACAGCTAGGT +
Preference number: 5 (lower is better)
Translates to: RSVSILKWLFKDSKF*SELLCNSSKLEQLG
Trigger: ACCTAGCTGTTCCAGCTTACTACTGTTGCATAACAGCTCACTCCAAAACTTACTGTCTTTGAACAACCATTTTAGTATACTCACAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS-3UTR CAA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTCAGTATTGTTACTGTaGCTGTTTTTAGCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFSVLLL*LFLAGP
Trigger: AGGGCCTGCTAAAAACAGCAACAGTAACAATACTGA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGAAGGCAATGAAGAGGTaGAGCACCACAAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: QCCSSIRNQNILIQYICLKAMKR*STTSFP
Trigger: AGGAAAACTTGTGGTGCTCAACCTCTTCATTGCCTT...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTTTCTTGGATTTTGGGTaGGTTCTCAAGGTGAACATC +
Preference number: 5 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFFLDFG*VLKVNI
Trigger: GATGTTCACCTTGAGAACCAACCCAAAATCCAAGAA...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGTCAGTATTGTTACTGTaGCTGTTTTTAGCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKSVLLL*LFLAGP
Trigger: AGGGCCTGCTAAAAACAGCAACAGTAACAATACTGA...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGTGGCCAGCTTCTCTTTaGAAGTACACAGTTCATTAC +
Preference number: 5 (lower is better)
Translates to: QCCSSIRNQNILIQYICLWPASL*KYTVHY
Trigger: GTAATGAACTGTGTACTTCAAAAGAGAAGCTGGCCA...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGTTCTTGGATTTTGGGTaGGTTCTCAAGGTGAACATC +
Preference number: 5 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKFLDFG*VLKVNI
Trigger: GATGTTCACCTTGAGAACCAACCCAAAATCCAAGAA...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp AATGTGCTCCTGATTTTCCAAGGTAGAAATCATTGTACTAACAATGGAAAGAAGCTGCTGGCAAAAGTCTaGAAGTTGAATATGTCATCG +
Preference number: 5 (lower is better)
Translates to: NVLLIFQGRNHCTNNGKKLLAKV*KLNMSS
Trigger: CGATGACATATTCAACTTCAAGACTTTTGCCAGCAG...CTTCTTTCCATTGTTAGTACAATGATTTCTACCTTGGAAAATCAGGAGCACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS-3UTR CAA 90 bp ATTTTGATGAGACATTCTAACGTAAAGATGACCACAAAGACCCAGTTGAGATGGTCTTCAGTGGCTGTATaGAAGTTCTCTAAAATCACA +
Preference number: 5 (lower is better)
Translates to: ILMRHSNVKMTTKTQLRWSSVAV*KFSKIT
Trigger: TGTGATTTTAGAGAACTTCAATACAGCCACTGAAGA...CCATCTCAACTGGGTCTTTGTGGTCATCTTTACGTTAGAATGTCTCATCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675672.1
ENST00000676045.1
CDS CCA 90 bp GAAATGGGAACCTACCCTTGCCAGTTTCCATCTTTCAAGAAAAGCTaGAAATCTGGAGTATTCATGTTAGAAAGTGTTTTTCAAAGTTTT +
Preference number: 5 (lower is better)
Translates to: EMGTYPCQFPSFKKS*KSGVFMLESVFQSF
Trigger: AAAACTTTGAAAAACACTTTCTAACATGAATACTCCAGATTTCCAGCTTTTCTTGAAAGATGGAAACTGGCAAGGGTAGGTTCCCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS-3UTR CAA 90 bp AACCAGACTTCAAAAACCCAGAGTAAGCACTTATGGTTTAGCCATGAAGAATTTCAGATGCCACACATTTaGAATTCAGGTGAATTTTCT +
Preference number: 5 (lower is better)
Translates to: NQTSKTQSKHLWFSHEEFQMPHI*NSGEFS
Trigger: AGAAAATTCACCTGAATTCAAAATGTGTGGCATCTG...AAATTCTTCATGGCTAAACCATAAGTGCTTACTCTGGGTTTTTGAAGTCTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS-3UTR CAA 90 bp CAATGCTGCAGTAGCATTAGGAACCAAAATATCTTGATCCAATATATCTGTTTGCTGAATGATATACTCTaGAAAGCCCAATCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: QCCSSIRNQNILIQYICLLNDIL*KAQSRV
Trigger: CACTCTAGATTGGGCTTTCAAGAGTATATCATTCAG...CAAACAGATATATTGGATCAAGATATTTTGGTTCCTAATGCTACTGCAGCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444237.2
CDS TCA 72 bp GCAGGACATCCTCCCGCTCTGAGCCACCTCCGGAAGTaGCGTCGGAGTGTCAACATGCAAGATGGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: AGHPPALSHLRK*RRSVNMQDGGP
Trigger: TGGGCCGCCATCTTGCATGTTGACACTCCGACGTCACTTCCGGAGGTGGCTCAGAGCGGGAGGATGTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674755.1
CDS GCA 72 bp CCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTaGAGGTATGGAAGCCCGGTTCCTCGGTCTTCCGGA +
Preference number: 6 (lower is better)
Translates to: PITGRTQQGGGK*RYGSPVPRSSG
Trigger: TCCGGAAGACCGAGGAACCGGGCTTCCATACCTGCACTTTCCTCCGCCCTGCTGTGTTCTGCCGGTGATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674755.1
CDS CCA 72 bp CCTCCGGAAGTGACGTCGGAGTGTCAACATGCAAGATaGCGGCCCATCACCGGCAGAACACAGCAGGGCGGA +
Preference number: 6 (lower is better)
Translates to: PPEVTSECQHAR*RPITGRTQQGG
Trigger: TCCGCCCTGCTGTGTTCTGCCGGTGATGGGCCGCCATCTTGCATGTTGACACTCCGACGTCACTTCCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674755.1
CDS GCA 72 bp TCCACAGAGCAAGTCTCTCAGCAGAGTTCGAGCTTCTaGTCCTGGCAGCTGCCTGGAGCCCTTCTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: STEQVSQQSSSF*SWQLPGALLGG
Trigger: TCCTCCCAGAAGGGCTCCAGGCAGCTGCCAGGAGCAGAAGCTCGAACTCTGCTGAGAGACTTGCTCTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302328.9
ENST00000665106.1
ENST00000668754.1
CDS CCA 72 bp CACGAGGAATGTCGCCATAGAGCTTGGGCAACTTCCTaGAGGCCTTTAGGTCAAGCTGAGGCCGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: HEECRHRAWATS*RPLGQAEAEAG
Trigger: CCCAGCCTCGGCCTCAGCTTGACCTAAAGGCCTCCAGGAAGTTGCCCAAGCTCTATGGCGACATTCCTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000302328.9
ENST00000444237.2
ENST00000456224.7
ENST00000665106.1
ENST00000668754.1
ENST00000675223.1
ENST00000675672.1
ENST00000675892.1
ENST00000676045.1
ENST00000676176.1
CDS CAA 72 bp GTAGGCGTGGAGGTGAGGGCTCAGTCACAGTGGACCTaGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: VGVEVRAQSQWT*PLATPKLDKSP
Trigger: TGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACTGAGCCCTCACCTCCACGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000668754.1
CDS CAA 90 bp GAGGTAGGCGTGGAGGTGAGGGCTCAGTCACAGTGGACCTTGCCCTaGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: EVGVEVRAQSQWTLP*ATPKLDKSPLQRVW
Trigger: CCAGACTCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACTGAGCCCTCACCTCCACGCCTACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000668754.1
CDS CCA 72 bp GAGACTGCGATGCTGGGGAGACCACAAGTAGCGCTCTaGTCAACAGCCCTAGTTGAGCATCCACCTAGCAGC +
Preference number: 6 (lower is better)
Translates to: ETAMLGRPQVAL*STALVEHPPSS
Trigger: GCTGCTAGGTGGATGCTCAACTAGGGCTGTTGACCAGAGCGCTACTTGTGGTCTCCCCAGCATCGCAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS TCA 72 bp CACAACTGTCCCCTCCTGTGGAGAATTGTCCCCTGCTaGATGGCAGCCTCCTCACTTGGAGAGCTACACACC +
Preference number: 6 (lower is better)
Translates to: HNCPLLWRIVPC*MAASSLGELHT
Trigger: GGTGTGTAGCTCTCCAAGTGAGGAGGCTGCCATTCAGCAGGGGACAATTCTCCACAGGAGGGGACAGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CAA 72 bp GTGGAGGTGAGGGCTCAGTCACAGTGGACCTTGCCCTaGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAA +
Preference number: 6 (lower is better)
Translates to: VEVRAQSQWTLP*ATPKLDKSPLQ
Trigger: TTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACTGAGCCCTCACCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000668754.1
CDS CAA 90 bp AGCTATGAGGTAGGCGTGGAGGTGAGGGCTCAGTCACAGTGGACCTaGCCCTTGGCCACCCCAAAGCTAGACAAGTCTCCATTGCAAAGA +
Preference number: 6 (lower is better)
Translates to: SYEVGVEVRAQSQWT*PLATPKLDKSPLQR
Trigger: TCTTTGCAATGGAGACTTGTCTAGCTTTGGGGTGGCCAAGGGCAAGGTCCACTGTGACTGAGCCCTCACCTCCACGCCTACCTCATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000668754.1
CDS CAA 90 bp CCCTCCTGTGGAGAATTGTCCCCTGCTGAATGGCAGCCTCCTCACTaGGAGAGCTACACACCCCCTTCTACATGTCTGACTGACTTAGGC +
Preference number: 6 (lower is better)
Translates to: PSCGELSPAEWQPPH*ESYTPPSTCLTDLG
Trigger: GCCTAAGTCAGTCAGACATGTAGAAGGGGGTGTGTAGCTCTCCAAGTGAGGAGGCTGCCATTCAGCAGGGGACAATTCTCCACAGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CCA 72 bp CCAAGCAGGAGACACTGCAGGCACAAATGCACAGAGTaGGGACTCTGCTCCCCATTCAGTGGCCAATCACAT +
Preference number: 6 (lower is better)
Translates to: PSRRHCRHKCTE*GLCSPFSGQSH
Trigger: ATGTGATTGGCCACTGAATGGGGAGCAGAGTCCCCACTCTGTGCATTTGTGCCTGCAGTGTCTCCTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676333.1
CDS CAA 72 bp CACACGAAGCTGAAGCTGCCTGGGGAACCTGACTTCTaGGTAAGGTGGCTCCAGACAGCAATCCCAGCGATA +
Preference number: 6 (lower is better)
Translates to: HTKLKLPGEPDF*VRWLQTAIPAI
Trigger: TATCGCTGGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGGTTCCCCAGGCAGCTTCAGCTTCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000665106.1
CDS TCA 72 bp TTTGCAACACACGAAGCTGAAGCTGCCTGGGGAACCTaGCTTCTTGGTAAGGTGGCTCCAGACAGCAATCCC +
Preference number: 6 (lower is better)
Translates to: FATHEAEAAWGT*LLGKVAPDSNP
Trigger: GGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGGTTCCCCAGGCAGCTTCAGCTTCGTGTGTTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000665106.1
CDS CAA 72 bp GGAGAATTGTCCCCTGCTGAATGGCAGCCTCCTCACTaGGAGAGCTACACACCCCCTTCTACATGTCTGACT +
Preference number: 6 (lower is better)
Translates to: GELSPAEWQPPH*ESYTPPSTCLT
Trigger: AGTCAGACATGTAGAAGGGGGTGTGTAGCTCTCCAAGTGAGGAGGCTGCCATTCAGCAGGGGACAATTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CCA 72 bp CTGAAGCTGCCTGGGGAACCTGACTTCTTGGTAAGGTaGCTCCAGACAGCAATCCCAGCGATACTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: LKLPGEPDFLVR*LQTAIPAILLE
Trigger: TTCAAGAAGTATCGCTGGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGGTTCCCCAGGCAGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000665106.1
CDS CAA 72 bp AAGCACCAGCCTTCCAGGGTCTTCCAATCTGACTTCTaGGTAAGGTGGCTCCAGACAGCAATCCCAGCGATA +
Preference number: 6 (lower is better)
Translates to: KHQPSRVFQSDF*VRWLQTAIPAI
Trigger: TATCGCTGGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGATTGGAAGACCCTGGAAGGCTGGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS CAA 90 bp GGTTTGCAACACACGAAGCTGAAGCTGCCTGGGGAACCTGACTTCTaGGTAAGGTGGCTCCAGACAGCAATCCCAGCGATACTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: GLQHTKLKLPGEPDF*VRWLQTAIPAILLE
Trigger: TTCAAGAAGTATCGCTGGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGGTTCCCCAGGCAGCTTCAGCTTCGTGTGTTGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302328.9
ENST00000665106.1
CDS TCA 72 bp AAGGTGGCTCCAGACAGCAATCCCAGCGATACTTCTTaGAGCTCTCCACAGAGCAAGTCTCTCAGCAGAGTT +
Preference number: 6 (lower is better)
Translates to: KVAPDSNPSDTS*SSPQSKSLSRV
Trigger: AACTCTGCTGAGAGACTTGCTCTGTGGAGAGCTTCAAGAAGTATCGCTGGGATTGCTGTCTGGAGCCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302328.9
ENST00000665106.1
ENST00000668754.1
CDS TCA 72 bp GGATATAAAGCACCAGCCTTCCAGGGTCTTCCAATCTaGCTTCTTGGTAAGGTGGCTCCAGACAGCAATCCC +
Preference number: 6 (lower is better)
Translates to: GYKAPAFQGLPI*LLGKVAPDSNP
Trigger: GGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGATTGGAAGACCCTGGAAGGCTGGTGCTTTATATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS GCA 72 bp CAGCATCCATTAAGGCAGATATGTTGCAGGATGGCATaGATCATTAGCTACTGGGTAAGACTGGGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: QHPLRQICCRMA*IISYWVRLGVP
Trigger: GGGCACCCCCAGTCTTACCCAGTAGCTAATGATGCATGCCATCCTGCAACATATCTGCCTTAATGGATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CCA 72 bp AACAATGGCTGCATATTCTTTGGCACCACTGAGAGGTaGGGATCTATGTCCCTTCTCTTGAGTCTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: NNGCIFFGTTER*GSMSLLLSLGR
Trigger: CCTGCCCAGACTCAAGAGAAGGGACATAGATCCCCACCTCTCAGTGGTGCCAAAGAATATGCAGCCATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS TCA 72 bp CTTGGAGAGCTACACACCCCCTTCTACATGTCTGACTaGCTTAGGCCCTTGCTTCAAAGTGGGACAATTCTG +
Preference number: 6 (lower is better)
Translates to: LGELHTPFYMSD*LRPLLQSGTIL
Trigger: CAGAATTGTCCCACTTTGAAGCAAGGGCCTAAGTCAGTCAGACATGTAGAAGGGGGTGTGTAGCTCTCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS TCA 72 bp CCCAGACATCATGGAGCAGAAACCCGCTGCCCTGACTaGATCCCTAACCCACAGATCTGTGAGTATACTAAA +
Preference number: 6 (lower is better)
Translates to: PRHHGAETRCPD*IPNPQICEYTK
Trigger: TTTAGTATACTCACAGATCTGTGGGTTAGGGATTCAGTCAGGGCAGCGGGTTTCTGCTCCATGATGTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS GCA 72 bp ACAAGTATTTCTGTTAAGCTTCCAAGCAGGAGACACTaGAGGCACAAATGCACAGAGTGGGGACTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: TSISVKLPSRRH*RHKCTEWGLCS
Trigger: GGAGCAGAGTCCCCACTCTGTGCATTTGTGCCTGCAGTGTCTCCTGCTTGGAAGCTTAACAGAAATACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676333.1
CDS CCA 72 bp CCTTCCAGGGTCTTCCAATCTGACTTCTTGGTAAGGTaGCTCCAGACAGCAATCCCAGCGATACTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: PSRVFQSDFLVR*LQTAIPAILLE
Trigger: TTCAAGAAGTATCGCTGGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGATTGGAAGACCCTGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS CAA 72 bp AAGAAAAGGAGGGCACTGCGAGGGAATAAATTTGGTTaGCAACACACGAAGCTGAAGCTGCCTGGGGAACCT +
Preference number: 6 (lower is better)
Translates to: KKRRALRGNKFG*QHTKLKLPGEP
Trigger: AGGTTCCCCAGGCAGCTTCAGCTTCGTGTGTTGCAAACCAAATTTATTCCCTCGCAGTGCCCTCCTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302328.9
ENST00000665106.1
ENST00000668754.1
CDS CAA 90 bp TCTTTAGGTGTCAGCTTAGATGCACCTTCCTCTAAGAAGCCATCCTaGATGCCTCTAAAGCACAGCAGTGCCTCTCCCTGCTACCACTTT +
Preference number: 6 (lower is better)
Translates to: SLGVSLDAPSSKKPS*MPLKHSSASPCYHF
Trigger: AAAGTGGTAGCAGGGAGAGGCACTGCTGTGCTTTAGAGGCATCAAGGATGGCTTCTTAGAGGAAGGTGCATCTAAGCTGACACCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CAA 90 bp AGGGATATAAAGCACCAGCCTTCCAGGGTCTTCCAATCTGACTTCTaGGTAAGGTGGCTCCAGACAGCAATCCCAGCGATACTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: RDIKHQPSRVFQSDF*VRWLQTAIPAILLE
Trigger: TTCAAGAAGTATCGCTGGGATTGCTGTCTGGAGCCACCTTACCAAGAAGTCAGATTGGAAGACCCTGGAAGGCTGGTGCTTTATATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS TCA 72 bp TCTTCTAAACAACTCATTTGCTCACCACGAATTATCTaGACTACAACCTCGCCGGGTCGTGGGAGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SSKQLICSPRII*TTTSPGRGSSP
Trigger: GGGAGAACTCCCACGACCCGGCGAGGTTGTAGTTCAGATAATTCGTGGTGAGCAAATGAGTTGTTTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674979.1
CDS GCA 72 bp CTCACTGAGACAGAGAGTGCAAGAAAAGGAGGGCACTaGGAGGGAATAAATTTGGTTTGCAACACACGAAGC +
Preference number: 6 (lower is better)
Translates to: LTETESARKGGH*EGINLVCNTRS
Trigger: GCTTCGTGTGTTGCAAACCAAATTTATTCCCTCGCAGTGCCCTCCTTTTCTTGCACTCTCTGTCTCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302328.9
ENST00000665106.1
ENST00000668754.1
CDS GCA 72 bp TGTTCAGCAAATGGATTGAACATGGAGCCAAAAACATaGGAAGCACTGGGACAATCTTCAGCCCCGCCACTA +
Preference number: 6 (lower is better)
Translates to: CSANGLNMEPKT*EALGQSSAPPL
Trigger: TAGTGGCGGGGCTGAAGATTGTCCCAGTGCTTCGCATGTTTTTGGCTCCATGTTCAATCCATTTGCTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674755.1
ENST00000676333.1
CDS CCA 72 bp AGAGTCGGAAGTGAAGGGGCGGAAATTCCGCTCATCTaGAAAGATTACTGGGTAGCATCTGTCATCCATCTT +
Preference number: 6 (lower is better)
Translates to: RVGSEGAEIPLI*KDYWVASVIHL
Trigger: AAGATGGATGACAGATGCTACCCAGTAATCTTTCCAGATGAGCGGAATTTCCGCCCCTTCACTTCCGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302328.9
ENST00000444237.2
ENST00000665106.1
ENST00000668754.1
CDS TCA 72 bp TGCAGGTGCATCTATCTTCTGACTGTGAATGTTGGATaGGAACAACTCACAACTGTCCCCTCCTGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: CRCIYLLTVNVG*EQLTTVPSCGE
Trigger: TTCTCCACAGGAGGGGACAGTTGTGAGTTGTTCTCATCCAACATTCACAGTCAGAAGATAGATGCACCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS GCA 72 bp ACACCCCCTTCTACATGTCTGACTGACTTAGGCCCTTaGTTCAAAGTGGGACAATTCTGTGGTGCAATTCAT +
Preference number: 6 (lower is better)
Translates to: TPPSTCLTDLGP*FKVGQFCGAIH
Trigger: ATGAATTGCACCACAGAATTGTCCCACTTTGAAGCAAGGGCCTAAGTCAGTCAGACATGTAGAAGGGGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CCA 72 bp TTTCTGCAGGTGCATCTATCTTCTGACTGTGAATGTTaGATGAGAACAACTCACAACTGTCCCCTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: FLQVHLSSDCEC*MRTTHNCPLLW
Trigger: CCACAGGAGGGGACAGTTGTGAGTTGTTCTCATCCAACATTCACAGTCAGAAGATAGATGCACCTGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CCA 72 bp AGAGATGACCACCACTGTGGGTATAGCAGGAACTTTTaGCATAGACAAAACCAAAGCAGGGCATCATTCCTG +
Preference number: 6 (lower is better)
Translates to: RDDHHCGYSRNF*HRQNQSRASFL
Trigger: CAGGAATGATGCCCTGCTTTGGTTTTGTCTATGCCAAAAGTTCCTGCTATACCCACAGTGGTGGTCATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS CAA 90 bp GCAGCAGTAGGCACTCAGCCAGTATTTGTAGAAAGAATTAGCTATTaGCTTCCATCCAATAACATGAACACCGTGGGGCACGTGCACTTT +
Preference number: 6 (lower is better)
Translates to: AAVGTQPVFVERISY*LPSNNMNTVGHVHF
Trigger: AAAGTGCACGTGCCCCACGGTGTTCATGTTATTGGATGGAAGCAAATAGCTAATTCTTTCTACAAATACTGGCTGAGTGCCTACTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS TCA 72 bp TGCGAGGGAATAAATTTGGTTTGCAACACACGAAGCTaGAGCTGCCTGGGGAACCTTTATTATGGGTCCAAA +
Preference number: 6 (lower is better)
Translates to: CEGINLVCNTRS*SCLGNLYYGSK
Trigger: TTTGGACCCATAATAAAGGTTCCCCAGGCAGCTTCAGCTTCGTGTGTTGCAAACCAAATTTATTCCCTCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668754.1
CDS GCA 72 bp TGTTCAGCAAATGGATTGAACATGGAGCCAAAAACATaGGAAGCACTGGGACAATCTCATCACATGGCTACC +
Preference number: 6 (lower is better)
Translates to: CSANGLNMEPKT*EALGQSHHMAT
Trigger: GGTAGCCATGTGATGAGATTGTCCCAGTGCTTCGCATGTTTTTGGCTCCATGTTCAATCCATTTGCTGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302328.9
ENST00000665106.1
ENST00000668754.1
ENST00000675269.1
CDS GCA 72 bp GTGCTGTTGTTCAGGCTCAGGTTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAATTCAACGTCATCTTC +
Preference number: 6 (lower is better)
Translates to: VLLFRLRLCDAL*IIFTRKFNVIF
Trigger: GAAGATGACGTTGAATTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675672.1
CDS CCA 72 bp GAAGAGGTTGAGCACCACTCTGAAGGAACGCAAGAATaGCCAGCTTCTCTTTTGAAGTACACAGTTCATTAC +
Preference number: 6 (lower is better)
Translates to: EEVEHHSEGTQE*PASLLKYTVHY
Trigger: GTAATGAACTGTGTACTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTCAGAGTGGTGCTCAACCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676176.1
CDS CCA 72 bp AGATGGAAAACACAGGACCTTATGATTTCGGTAGAATaGGTCCAAGTCTTCCAGAGGCTTTCCTATGAGCTC +
Preference number: 6 (lower is better)
Translates to: RWKTQDLMISVE*VQVFQRLSYEL
Trigger: GAGCTCATAGGAAAGCCTCTGGAAGACTTGGACCCATTCTACCGAAATCATAAGGTCCTGTGTTTTCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676045.1
CDS CAA 90 bp GTTGAGCACCACTCTGAAGGAACGCAAGAATGGCCAGCTTCTCTTTaGAAGTACACAGTTCATTACATCTGCAAAACTCAGAAGAGCAAC +
Preference number: 6 (lower is better)
Translates to: VEHHSEGTQEWPASL*KYTVHYICKTQKSN
Trigger: GTTGCTCTTCTGAGTTTTGCAGATGTAATGAACTGTGTACTTCAAAAGAGAAGCTGGCCATTCTTGCGTTCCTTCAGAGTGGTGCTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676176.1
CDS GCA 72 bp CTTCTGTTGTTCAGGCTCAGGTTGTGTGATGCGCTGTaGATTATCTTCACCAGAAAATTCAACGTCATCTTC +
Preference number: 6 (lower is better)
Translates to: LLLFRLRLCDAL*IIFTRKFNVIF
Trigger: GAAGATGACGTTGAATTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456224.7
CDS GCA 72 bp TGGAGACCAAAAGGCAGTGATATGATATATTCAAAGTaGTGTTGTTCAGGCTCAGGTTGTGTGATGCGCTGT +
Preference number: 6 (lower is better)
Translates to: WRPKGSDMIYSK*CCSGSGCVMRC
Trigger: ACAGCGCATCACACAACCTGAGCCTGAACAACAGCACTTTGAATATATCATATCACTGCCTTTTGGTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675672.1
CDS CAA 72 bp ACTGGTAACATCAGACTTCTGTTGTTCAGGCTCAGGTaGTGTGATGCGCTGTGCATTATCTTCACCAGAAAA +
Preference number: 6 (lower is better)
Translates to: TGNIRLLLFRLR*CDALCIIFTRK
Trigger: TTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGAAGTCTGATGTTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456224.7
CDS CAA 72 bp GGCACTCAGCCAGTATTTGTAGAAAGAATTAGCTATTaGCTTCCATCCAATAACATGAACACCGTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: GTQPVFVERISY*LPSNNMNTVGH
Trigger: GTGCCCCACGGTGTTCATGTTATTGGATGGAAGCAAATAGCTAATTCTTTCTACAAATACTGGCTGAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CAA 90 bp GGTGGAAAGACATACTGGATACTTTCACTGTGTTCAGCAAATGGATaGAACATGGAGCCAAAAACATGCGAAGCACTGGGACAATCTCAT +
Preference number: 6 (lower is better)
Translates to: GGKTYWILSLCSANG*NMEPKTCEALGQSH
Trigger: ATGAGATTGTCCCAGTGCTTCGCATGTTTTTGGCTCCATGTTCAATCCATTTGCTGAACACAGTGAAAGTATCCAGTATGTCTTTCCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302328.9
ENST00000665106.1
ENST00000668754.1
ENST00000675269.1
CDS TCA 72 bp CTGGAACAGCTAGGTACAACCCGTGCATCTGTCCACTaGTGTTCAAGTCATAAATTTCACATGACTTACTCT +
Preference number: 6 (lower is better)
Translates to: LEQLGTTRASVH*CSSHKFHMTYS
Trigger: AGAGTAAGTCATGTGAAATTTATGACTTGAACATCAGTGGACAGATGCACGGGTTGTACCTAGCTGTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS GCA 72 bp CCTAGTGTCTCCCCCAACCCTGGCATACAGCAGAAATaGTTAATAATTCCTACCTGCCTTTACATTTTAAGA +
Preference number: 6 (lower is better)
Translates to: PSVSPNPGIQQK*LIIPTCLYILR
Trigger: TCTTAAAATGTAAAGGCAGGTAGGAATTATTAAGCATTTCTGCTGTATGCCAGGGTTGGGGGAGACACTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CAA 72 bp CTCCAAAGAGGCAGCAATTCCTTACTCTACCCATTTTaGTCAGGTATTAACAGAAATGGGAACCTACCCTTG +
Preference number: 6 (lower is better)
Translates to: LQRGSNSLLYPF*SGINRNGNLPL
Trigger: CAAGGGTAGGTTCCCATTTCTGTTAATACCTGACAAAAATGGGTAGAGTAAGGAATTGCTGCCTCTTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CAA 90 bp CTGCTTTTCAGAATTCCTTCAACAGGCAACAAAAAGATGGTGCTTTaGAAGAATGTGCTTAGAAAGAGCAGGGATTCCTCTTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: LLFRIPSTGNKKMVL*KNVLRKSRDSSSSS
Trigger: GGATGAGGAAGAGGAATCCCTGCTCTTTCTAAGCACATTCTTCAAAAGCACCATCTTTTTGTTGCCTGTTGAAGGAATTCTGAAAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS GCA 72 bp TTGTTCAAAGACAGTAAGTTTTGGAGTGAGCTGTTATaGAACAGTAGTAAGCTGGAACAGCTAGGTACAACC +
Preference number: 6 (lower is better)
Translates to: LFKDSKFWSELL*NSSKLEQLGTT
Trigger: GGTTGTACCTAGCTGTTCCAGCTTACTACTGTTGCATAACAGCTCACTCCAAAACTTACTGTCTTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS CAA 90 bp CTGACTGAATCCCTAACCCACAGATCTGTGAGTATACTAAAATGGTaGTTCAAAGACAGTAAGTTTTGGAGTGAGCTGTTATGCAACAGT +
Preference number: 6 (lower is better)
Translates to: LTESLTHRSVSILKW*FKDSKFWSELLCNS
Trigger: ACTGTTGCATAACAGCTCACTCCAAAACTTACTGTCTTTGAACAACCATTTTAGTATACTCACAGATCTGTGGGTTAGGGATTCAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS TCA 72 bp GAATTCCTTCAACAGGCAACAAAAAGATGGTGCTTTTaGAGAATGTGCTTAGAAAGAGCAGGGATTCCTCTT +
Preference number: 6 (lower is better)
Translates to: EFLQQATKRWCF*RMCLERAGIPL
Trigger: AAGAGGAATCCCTGCTCTTTCTAAGCACATTCTTCAAAAGCACCATCTTTTTGTTGCCTGTTGAAGGAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS TCA 72 bp TATATTCAAAGTGCTGTTGTTCAGGCTCAGGTTGTGTaGTGCGCTGTGCATTATCTTCACCAGAAAATTCAA +
Preference number: 6 (lower is better)
Translates to: YIQSAVVQAQVV*CAVHYLHQKIQ
Trigger: TTGAATTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGCACTTTGAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675672.1
CDS TCA 72 bp GGCCTTGCATTAGAAATAATGGAGACCAAAAGGCAGTaGTATGATATATTCAAAGTGCTGTTGTTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: GLALEIMETKRQ*YDIFKVLLFRL
Trigger: GAGCCTGAACAACAGCACTTTGAATATATCATATCACTGCCTTTTGGTCTCCATTATTTCTAATGCAAGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675672.1
CDS CAA 72 bp AAAAATACTTACTCTGCAATGTCAGTATTGTTACTGTaGCTGTTTTTAGCAGGCCCTGTAGCCATGAACACG +
Preference number: 6 (lower is better)
Translates to: KNTYSAMSVLLL*LFLAGPVAMNT
Trigger: CGTGTTCATGGCTACAGGGCCTGCTAAAAACAGCAACAGTAACAATACTGACATTGCAGAGTAAGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CAA 72 bp TATGATATATTCAAAGTGCTGTTGTTCAGGCTCAGGTaGTGTGATGCGCTGTGCATTATCTTCACCAGAAAA +
Preference number: 6 (lower is better)
Translates to: YDIFKVLLFRLR*CDALCIIFTRK
Trigger: TTTTCTGGTGAAGATAATGCACAGCGCATCACACAACCTGAGCCTGAACAACAGCACTTTGAATATATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675672.1
CDS GCA 72 bp TTTTGTCAGGTATTAACAGAAATGGGAACCTACCCTTaGCAGTTTCCATCTTTCAAGAAAAGCTGGAAATCT +
Preference number: 6 (lower is better)
Translates to: FCQVLTEMGTYP*QFPSFKKSWKS
Trigger: AGATTTCCAGCTTTTCTTGAAAGATGGAAACTGGCAAGGGTAGGTTCCCATTTCTGTTAATACCTGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665106.1
CDS CAA 72 bp TCCCTAACCCACAGATCTGTGAGTATACTAAAATGGTaGTTCAAAGACAGTAAGTTTTGGAGTGAGCTGTTA +
Preference number: 6 (lower is better)
Translates to: SLTHRSVSILKW*FKDSKFWSELL
Trigger: TAACAGCTCACTCCAAAACTTACTGTCTTTGAACAACCATTTTAGTATACTCACAGATCTGTGGGTTAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675269.1
CDS CCA 72 bp AGTATACTAAAATGGTTGTTCAAAGACAGTAAGTTTTaGAGTGAGCTGTTATGCAACAGTAGTAAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: SILKWLFKDSKF*SELLCNSSKLE
Trigger: TTCCAGCTTACTACTGTTGCATAACAGCTCACTCCAAAACTTACTGTCTTTGAACAACCATTTTAGTATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675269.1