RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCN10A (Homo sapiens)

Ensembl gene IDs: ENSG00000185313

Ensembl transcript IDs: ENST00000449082.3, ENST00000643924.1, ENST00000655275.1

Found 514 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATaGAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCAC +
Preference number: 1 (lower is better)
Translates to: YPGSEQLSDSSHMQS*KILNNIANLCMVLH
Trigger: GTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR TCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCCAGTTCTGACATTGTaGCCAGTGGCATGCATTGGT +
Preference number: 2 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQPVLTL*PVACIG
Trigger: ACCAATGCATGCCACTGGTCACAATGTCAGAACTGG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR CCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCACAGAGGACTACCTTaGACCTTCAGTAATGTTCTT +
Preference number: 2 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQHRGLP*TFSNVL
Trigger: AAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR GCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAACCAATCTCTGTATGGTaGTCCACAGAGGACTACCTT +
Preference number: 2 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQPISVW*STEDYL
Trigger: AAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGG...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR CAA 90 bp GCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGTaGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAATAAT +
Preference number: 2 (lower is better)
Translates to: AFHDIGHRCYPGSEQ*SDSSHMQSCKILNN
Trigger: ATTATTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR TCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGGACGCATCATAACTaGACATATCCAGGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFRTHHN*TYPGWS
Trigger: ACTCCAGCCTGGATATGTTCAGTTATGATGCGTCCT...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR TCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAATGGAAGTTCTGGTCCTaGGAAGTTTGTCTCAGTAAA +
Preference number: 2 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKWKFWS*EVCLSK
Trigger: TTTACTGAGACAAACTTCTCAGGACCAGAACTTCCA...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR TCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAAGGACGCATCATAACTaGACATATCCAGGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: CKILNNIANLCMVLHRGLRTHHN*TYPGWS
Trigger: ACTCCAGCCTGGATATGTTCAGTTATGATGCGTCCT...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR TCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATTGGAAGTTCTGGTCCTaGGAAGTTTGTCTCAGTAAA +
Preference number: 2 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYWKFWS*EVCLSK
Trigger: TTTACTGAGACAAACTTCTCAGGACCAGAACTTCCA...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR CCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTTTGCCAATCTCTGTATaGTGCTCCACAGAGGACTAC +
Preference number: 2 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPLPISV*CSTEDY
Trigger: GTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAA...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR CCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAGGGTGTGATCTGCAATaGGAAAGAGTTAACACAGAG +
Preference number: 2 (lower is better)
Translates to: CKILNNIANLCMVLHRGLGCDLQ*ERVNTE
Trigger: CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCC...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTGGGTGTGATCTGCAATaGGAAAGAGTTAACACAGAG +
Preference number: 2 (lower is better)
Translates to: HDLILKFRREITVEVLLAGCDLQ*ERVNTE
Trigger: CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCC...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR CAA 90 bp GACAAGGGATATTTTCTGGAGAGTAAGAGAACCCATGATCTGATATaGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: DKGYFLESKRTHDLI*KFRREITVEVLLAS
Trigger: AGAAGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTTACTCTCCAGAAAATATCCCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR TCA 72 bp GTTACCAGTTGCATTCCCTGCCCAGTTCTGACATTGTaGCCAGTGGCATGCATTGGTGAGGCTGTAGCTGGG +
Preference number: 3 (lower is better)
Translates to: VTSCIPCPVLTL*PVACIGEAVAG
Trigger: CCCAGCTACAGCCTCACCAATGCATGCCACTGGTCACAATGTCAGAACTGGGCAGGGAATGCAACTGGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR TCA 72 bp CAAAGGTGGTTACCAGTTGCATTCCCTGCCCAGTTCTaGCATTGTGACCAGTGGCATGCATTGGTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: QRWLPVAFPAQF*HCDQWHALVRL
Trigger: CAGCCTCACCAATGCATGCCACTGGTCACAATGTCAGAACTGGGCAGGGAATGCAACTGGTAACCACCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGAAAGGTGGTTACCAGTaGCATTCCCTGCCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQKGGYQ*HSLPSS
Trigger: AGAACTGGGCAGGGAATGCAACTGGTAACCACCTTT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR CCA 72 bp TGCATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATaGGAAAGAGTTAACACAGAGCAGAAGGACGCATCA +
Preference number: 3 (lower is better)
Translates to: CIGEAVAGCDLQ*ERVNTEQKDAS
Trigger: TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR CAA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAAAAGGTGGTTACCAGTaGCATTCCCTGCCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVKGGYQ*HSLPSS
Trigger: AGAACTGGGCAGGGAATGCAACTGGTAACCACCTTT...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR CAA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGTCTTGTTCTATATCTTaGGAAGTTCTGGTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWSCSIS*EVLVLR
Trigger: TCTCAGGACCAGAACTTCCAAAGATATAGAACAAGA...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTATCTTGTTCTATATCTTaGGAAGTTCTGGTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: CKILNNIANLCMVLHRGLSCSIS*EVLVLR
Trigger: TCTCAGGACCAGAACTTCCAAAGATATAGAACAAGA...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGGACTCCCTCAGGGAGTaGGATATCTCGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQDSLRE*DISARG
Trigger: TCCCCTGGCCGAGATATCTCACTCCCTGAGGGAGTC...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCCAGATTGCCTCTACTaGAGACCACGAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQPDCLY*RPRAPG
Trigger: TCCAGGAGCTCGTGGTCTCCAGTAGAGGCAATCTGG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCCACAGGTGTTACCCTaGGTCAGAGCAGTTGTCCGA +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQPQVLP*VRAVVR
Trigger: TCGGACAACTGCTCTGACCCAGGGTAACACCTGTGG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCTCCCCGATCAGTTCTaGTGGGAGCTCACCATAGAA +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQLPDQF*WELTIE
Trigger: TTCTATGGTGAGCTCCCAGCAGAACTGATCGGGGAG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGACTGACAACACTCATTaGCCTTTGGGCCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQTDNTH*PLGPER
Trigger: CCTTTCCGGGCCCAAAGGGCAATGAGTGTTGTCAGT...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCCACCACCACCCGCATaGCTTCAAATCGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQPPPPA*LQIEKE
Trigger: CTCTTTCTCGATTTGAAGGCATGCGGGTGGTGGTGG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGACTTCTGAGACAAGCTaGTCAAGCAGGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQTSETS*SSRVGT
Trigger: AGTGCCCACCCTGCTTGACCAGCTTGTCTCAGAAGT...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGGCTCAGGCTCTGCCTTaGGCTGGGGGAATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQAQALP*AGGMGR
Trigger: CCTGCCCATTCCCCCAGCCCAAGGCAGAGCCTGAGC...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCTCAGCCTTGGAGCTaGAGAGTGGGAGTTTCACCA +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQSQPWS*RVGVSP
Trigger: TGGTGAAACTCCCACTCTCCAGCTCCAAGGCTGAGA...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTGTGGTTCTCAGCCTTaGAGCTGGAGAGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQCGSQP*SWRVGV
Trigger: AACTCCCACTCTCCAGCTCCAAGGCTGAGAACCACA...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAGGGCCTCTGGGAGCTTaGAGCCCTCCAGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKGPLGA*SPPELP
Trigger: GGGGAGCTCTGGAGGGCTCCAAGCTCCCAGAGGCCC...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGGTGAGATATTCACAATaGGGAAGTCCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQVRYSQ*GSPAST
Trigger: GGTGCTGGCTGGACTTCCTCATTGTGAATATCTCAC...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTTTTCCCCTAGGAGCTaGTTGCCAACCAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQFSPRS*LPTRAK
Trigger: CTTTGCTCTGGTTGGCAAGCAGCTCCTAGGGGAAAA...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTGCCACCTGCAGAAGTaGAAGGTAACCCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQCHLQK*KVTHCN
Trigger: GTTGCAATGGGTTACCTTGCACTTCTGCAGGTGGCA...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAACAGGCTTCCCTTCTTaGCCACGCCCAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQTGFPS*PRPALA
Trigger: TGCTAGAGCTGGGCGTGGCCAAGAAGGGAAGCCTGT...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGAGAAAGAGCCCGCAGTaGCCGCAGAGCGCGAAGGGT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQRKSPQ*PQSAKG
Trigger: ACCCTTCGCGCTCTGCGGCCACTGCGGGCTCTTTCT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAAGAAAGAGCCCGCAGTaGCCGCAGAGCGCGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASRKSPQ*PQSAKG
Trigger: ACCCTTCGCGCTCTGCGGCCACTGCGGGCTCTTTCT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCTCCATCGGTATAGTTaGTGCACCTCCAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQLHRYS*CTSKTS
Trigger: GGAAGTTTTGGAGGTGCATCAACTATACCGATGGAG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCTTCTATCCCAGATTaGCTCTACTGGAGACCACGA +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQSSIPD*LYWRPR
Trigger: TCGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGA...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAAGAAGTCGTGCATGTaGCAGCGGGGCCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQKKSCM*QRGQSS
Trigger: TGAAGACTGGCCCCGCTGGCACATGCACGACTTCTT...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCACCAGCTCAGGCTCTaGCTTGGGCTGGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEHQLRL*LGLGEW
Trigger: CCATTCCCCCAGCCCAAGGCAGAGCCTGAGCTGGTG...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAGCTTTCAAGTCCAGCTaGGGCCGAGGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQAFKSS*GRGFSS
Trigger: AGAAGAGAAGCCTCGGCCCCAGCTGGACTTGAAAGC...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAACTAGTGGGCGGCGGTTaGTGTTCATCTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQLVGGG*CSSSPC
Trigger: GCATGGAGAAGATGAACACCAACCGCCGCCCACTAG...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGGATGATGCCTACGGCTaGGCTCCCACAGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQDDAYG*APTVPS
Trigger: AGAGGGGACTGTGGGAGCCCAGCCGTAGGCATCATC...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGTCAGGGTTGCTGGGTTaGGGAAGAGGGCTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQSGLLG*GRGLLG
Trigger: CCCTAGAAGCCCTCTTCCTCAACCCAGCAACCCTGA...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCCGTCAAGAAAAGGATaGGGCATATGGATTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQPSRKG*GIWIFG
Trigger: GCCAAAAATCCATATGCCTCATCCTTTTCTTGACGG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCCTTCTGCTCCCTATaGTTCTCTCTGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQSFCSL*FSLAFF
Trigger: AAAGAAAGCCAGAGAGAAGCATAGGGAGCAGAAGGA...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAACTTGGGCAGCTGGTTaGAGGCTTTCAAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQTWAAG*RLSSPA
Trigger: AGCTGGACTTGAAAGCCTGCAACCAGCTGCCCAAGT...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAACCCCTAGGAGCTGCTTaGCAACCAGAGCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQPLGAA*QPEQRQ
Trigger: TTGTCTTTGCTCTGGTTGGCAAGCAGCTCCTAGGGG...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGAAAGACCTGGATCCGTaGCAGGGCCACCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQKDLDP*QGHLQV
Trigger: AACCTGCAGGTGGCCCTGGCACGGATCCAGGTCTTT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAGCGATGAAGTCACTGTaGTCATCCCTGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASAMKSL*SSLGPL
Trigger: CAGAGGCCCCAGGGATGAGCACAGTGACTTCATCGC...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAATGGTGGTATCCAGTTTaGAGCAGGGACAGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQWWYPV*SRDSGE
Trigger: TTCGCCACTGTCCCTGCTGCAAACTGGATACCACCA...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGCCCCTCTGGTGCCATTaGTGTTGGGCAGATTGGGGT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQPLWCH*CWADWG
Trigger: ACCCCAATCTGCCCAACAGCAATGGCACCAGAGGGG...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCATGGGGTGTTAGAGAGTaGCATGGAGCGGTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASWGVRE*HGAVQH
Trigger: GTGCTGCACCGCTCCATGGCACTCTCTAACACCCCA...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAGCTCACCATAGAACTTaGGCAGCTGGTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQAHHRT*AAGCRL
Trigger: AAGCCTGCAACCAGCTGCCCAAGTTCTATGGTGAGC...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAATCATCAGTGGTTGCCTaGTTCTGCTCCTCATACGCC +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQSSVVA*FCSSYA
Trigger: GGCGTATGAGGAGCAGAACCAGGCAACCACTGATGA...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAAGCAGAGAGCCCCGATaGCTTTCGTGGTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASSREPR*LSWSPG
Trigger: TCCTGGAGACCACGAAAGCCATCGGGGCTCTCTGCT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGCTCCAGAGCTCCCCCTaGCAGTGTTGGCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQLQSSP*QCWQQC
Trigger: ACATTGCTGCCAACACTGCCAGGGGGAGCTCTGGAG...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGGGGCCTCTGGGAGCTTaGAGCCCTCCAGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWGPLGA*SPPELP
Trigger: GGGGAGCTCTGGAGGGCTCCAAGCTCCCAGAGGCCC...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAACTCCTGGGTGTCAGGTaGTCCCCACACCTCTCGACT +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKLLGVR*SPHLST
Trigger: AGTCGAGAGGTGTGGGGACCACCTGACACCCAGGAG...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGATTTCGATTGGGTTTTaGGATTCTCAGGGGACCAGA +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQISIGF*DSQGTR
Trigger: TCTGGTCCCCTGAGAATCCCAAAACCCAATCGAAAT...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
3UTR CAA 72 bp GACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGTaGTCCGACAGCTCTCACATGCAGTCATGCAAAATC +
Preference number: 4 (lower is better)
Translates to: DIGHRCYPGSEQ*SDSSHMQSCKI
Trigger: GATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAGGATCAGAGCGGGGTaGTTTGTTGTCTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQRIRAG*FVVFCG
Trigger: TCCACAGAAGACAACAAATCACCCCGCTCTGATCCT...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTTGAATGACAGTGGCTaGAATGTCTTCTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQLNDSG*NVFLLP
Trigger: TGGAAGCAAGAAGACATTTCAGCCACTGTCATTCAA...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGGTAAGGGGTCAGAAGTaGCTCGCTTATTTATGTAGA +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQVRGQK*LAYLCR
Trigger: TCTACATAAATAAGCGAGGCACTTCTGACCCCTTAC...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTCTAGGGAGGGGGCCTTaGTGGCCAGCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPLGRGP*WPAPPP
Trigger: GGGTGGGGGTGCTGGCCAGCAAGGCCCCCTCCCTAG...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAATGTTCATCTTCTCCATaGCTGGAGTCAGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQCSSSP*LESGLL
Trigger: CAGCAACCCTGACTCCAGGCATGGAGAAGATGAACA...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAAAGAAGTCGTGCATGTaGCAGCGGGGCCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASKKSCM*QRGQSS
Trigger: TGAAGACTGGCCCCGCTGGCACATGCACGACTTCTT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGGCGATGAAGTCACTGTaGTCATCCCTGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEAMKSL*SSLGPL
Trigger: CAGAGGCCCCAGGGATGAGCACAGTGACTTCATCGC...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAACACCTCTCGACTTGCTaGAGCTGCTCCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKHLSTC*SCSCCP
Trigger: AGGACAGCAGGAGCAGCTGCAGCAAGTCGAGAGGTG...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449082.3
CDS-3UTR GCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCATACGGTAGCAAGTCTTaGGCACCTGCCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASYGSKS*APASPH
Trigger: ATGTGGGCTGGCAGGTGCGCAAGACTTGCTACCGTA...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGCACCTCTCGACTTGCTaGAGCTGCTCCTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQHLSTC*SCSCPL
Trigger: CAAAGGACAGGAGCAGCTGCAGCAAGTCGAGAGGTG...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCGATGGCCAAAGACCTaGATCCGTGCCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFRWPKT*IRARAT
Trigger: GGTGGCCCTGGCACGGATCCAGGTCTTTGGCCATCG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGGCTCAGGCTCTGCCTTaGGCTGGGGGAATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWAQALP*AGGMGR
Trigger: CCTGCCCATTCCCCCAGCCCAAGGCAGAGCCTGAGC...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCTCCAGAGCTCCCCCTaGCAGTGTTGGCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTELQSSP*QCWQQC
Trigger: ACATTGCTGCCAACACTGCCAGGGGGAGCTCTGGAG...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCAGTGCCTGGGCTCCTaGGTGTCAGGTGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWQCLGS*VSGGPH
Trigger: GTGGGGACCACCTGACACCCAGGAGCCCAGGCACTG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAAGATGTTCCAGTGCCTaGGCTCCTGGGTGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKRCSSA*APGCQV
Trigger: CACCTGACACCCAGGAGCCCAGGCACTGGAACATCT...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAGCAAAGCTTTCACCGTaGGCTTCTGGTCCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQAKLSP*ASGPGN
Trigger: ATTACCTGGACCAGAAGCCCACGGTGAAAGCTTTGC...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGAGAAGAAGCTGCCAGTaGAGTTTTGAATCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQRRSCQ*SFESCS
Trigger: ACTGCAAGATTCAAAACTCCACTGGCAGCTTCTTCT...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAGGATGTCCAAGCAGTaGATCTTATCTCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQRMSKQ*ILSPGT
Trigger: GGTCCCTGGAGATAAGATCCACTGCTTGGACATCCT...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAACTCTATCTCCACCAGTaGCTCCGGAGTAAAGCGACG +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKLYLHQ*LRSKAT
Trigger: CGTCGCTTTACTCCGGAGTCACTGGTGGAGATAGAG...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCTCTATCTCCACCAGTaGCTCCGGAGTAAAGCGACG +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTELYLHQ*LRSKAT
Trigger: CGTCGCTTTACTCCGGAGTCACTGGTGGAGATAGAG...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGGATCTCTCAGGTACGTaGACTCATTTAGACAAAATC +
Preference number: 4 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQDLSGT*THLDKI
Trigger: GATTTTGTCTAAATGAGTTCACGTACCTGAGAGATC...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAAGGAATCCTGTGTCATaGGGCGGAACAGTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASRNPVS*GGTVRG
Trigger: TCCTCTCACTGTTCCGCCTCATGACACAGGATTCCT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGAGACTCCATCATCTGTaGCTCCCTCAGGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQRLHHL*LPQGVR
Trigger: TCTCACTCCCTGAGGGAGTCACAGATGATGGAGTCT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAACTGCCAGTGGAGTTTTaGATCTTGCAGTCAGACTTG +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQLPVEF*ILQSDL
Trigger: CAAGTCTGACTGCAAGATTCAAAACTCCACTGGCAG...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTACTAGGGAGGGGGCCTTaGTGGCCAGCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVLGRGP*WPAPPP
Trigger: GGGTGGGGGTGCTGGCCAGCAAGGCCCCCTCCCTAG...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAACTGACAACACTCATTaGCCTTTGGGCCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASTDNTH*PLGPER
Trigger: CCTTTCCGGGCCCAAAGGGCAATGAGTGTTGTCAGT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATCACCAGCTCAGGCTCTaGCTTGGGCTGGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYHQLRL*LGLGEW
Trigger: CCATTCCCCCAGCCCAAGGCAGAGCCTGAGCTGGTG...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCGGCAGTCCACCGTGCTaGCCTCAGAGGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFGSPPC*PQRSLC
Trigger: ACACAAGCTCCTCTGAGGGCAGCACGGTGGACTGCC...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCTAGGCAGTCCACCGTaGTGCCCTCAGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFLGSPP*CPQRSL
Trigger: CAAGCTCCTCTGAGGGCAGCACGGTGGACTGCCTAG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCATCATCAGTGGTTGCCTaGTTCTGCTCCTCATACGCC +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASSSVVA*FCSSYA
Trigger: GGCGTATGAGGAGCAGAACCAGGCAACCACTGATGA...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCACATCTTCTCCATGCCTaGAGTCAGGGTTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASHLLHA*SQGCWV
Trigger: AACCCAGCAACCCTGACTCCAGGCATGGAGAAGATG...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAACTTCTGAGACAAGCTaGTCAAGCAGGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASTSETS*SSRVGT
Trigger: AGTGCCCACCCTGCTTGACCAGCTTGTCTCAGAAGT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCATTGCAGCAGGGACAGTaGCGAATGCATCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASLQQGQ*RMHPSV
Trigger: CACAGAAGGATGCATTCGCCACTGTCCCTGCTGCAA...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCACCCATGGACTCTTGGTaGTATCCAGTTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASPMDSW*YPVCSR
Trigger: CCTGCTGCAAACTGGATACCACCAAGAGTCCATGGG...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAGCTTCCATCGGAGAGTaGTTGCTATTGGTTCATAGG +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQASIGE*LLLVHR
Trigger: CCTATGAACCAATAGCAACCACTCTCCGATGGAAGC...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGAGGATCAGAGCGGGGTaGTTTGTTGTCTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQRIRAG*FVVFCG
Trigger: TCCACAGAAGACAACAAATCACCCCGCTCTGATCCT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAACCGTCAAGAAAAGGATaGGGCATATGGATTTTTGGC +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQPSRKG*GIWIFG
Trigger: GCCAAAAATCCATATGCCTCATCCTTTTCTTGACGG...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCACCCACGGAGATCTATTaGTGTGCCAACATATGCCAG +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASPTEIY*CANICQ
Trigger: CTGGCATATGTTGGCACAGCAATAGATCTCCGTGGG...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGCTGAGTCAGATCCATTaGCACACAGTAAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQLSQIH*HTVRGQ
Trigger: CTGACCCCTTACTGTGTGGCAATGGATCTGACTCAG...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGGCTGCTAGCACCTCCTaGTCCTTCCGGAGCATCTCG +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWAASTS*SFRSIS
Trigger: CGAGATGCTCCGGAAGGAGCAGGAGGTGCTAGCAGC...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTCGACTTGCTGCAGCTaGTCCTGCTGTCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFSTCCS*SCCPLG
Trigger: CCCCAAAGGACAGCAGGAGCAGCTGCAGCAAGTCGA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449082.3
CDS-3UTR GCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATCTAGGCAGTCCACCGTaGTGCCCTCAGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYLGSPP*CPQRSL
Trigger: CAAGCTCCTCTGAGGGCAGCACGGTGGACTGCCTAG...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGTTCTTCCAGGTCATCTaGCAGCTCAGGGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQFFQVI*QLRDLP
Trigger: AGGAAGATCCCTGAGCTGGCAGATGACCTGGAAGAA...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGTGCCACCTGCAGAAGTaGAAGGTAACCCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQCHLQK*KVTHCN
Trigger: GTTGCAATGGGTTACCTTGCACTTCTGCAGGTGGCA...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGACCAGAGAGAGTGTCTaGAAAGTCCGAGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQTRESV*KVRESR
Trigger: TCTGCTCTCTCGGACTTTGCAGACACTCTCTCTGGT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCCACACCTCTCGACTTaGTGCAGCTGCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFPHLST*CSCSCP
Trigger: AGGACAGGAGCAGCTGCAGCAAGTCGAGAGGTGTGG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAGCTCACCATAGAACTTaGGCAGCTGGTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKAHHRT*AAGCRL
Trigger: AAGCCTGCAACCAGCTGCCCAAGTTCTATGGTGAGC...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCACCCGATCAGTTCTGCTaGGAGCTCACCATAGAACTT +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASPDQFC*ELTIEL
Trigger: AAGTTCTATGGTGAGCTCCCAGCAGAACTGATCGGG...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAATCTCGAGGGCCTCCTaGAACTTCTTCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASISRAS*NFFSFA
Trigger: AGCAAAGGAGAAGAAGTTCCAGGAGGCCCTCGAGAT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGGCCTGTTTGGTACGATaGCCAAAGACCTGGATCCGT +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEACLVR*PKTWIR
Trigger: ACGGATCCAGGTCTTTGGCCATCGTACCAAACAGGC...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACATCCCTGGGGCCTCTaGGAGCTTGGAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLHPWGL*ELGALQ
Trigger: CTGGAGGGCTCCAAGCTCCCAGAGGCCCCAGGGATG...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCATCCCTGGGGCCTCTaGGAGCTTGGAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVHPWGL*ELGALQ
Trigger: CTGGAGGGCTCCAAGCTCCCAGAGGCCCCAGGGATG...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGTTGCAGCAGGGACAGTaGCGAATGCATCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTELQQGQ*RMHPSV
Trigger: CACAGAAGGATGCATTCGCCACTGTCCCTGCTGCAA...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGAGGATGTCCAAGCAGTaGATCTTATCTCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQRMSKQ*ILSPGT
Trigger: GGTCCCTGGAGATAAGATCCACTGCTTGGACATCCT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAATATCTTGGTCCCTATaGAAGAGACTCCACTCACGT +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQISWSL*KRLHSR
Trigger: ACGTGAGTGGAGTCTCTTCCATAGGGACCAAGATAT...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR TCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGTTAGGCAGAAGATGGTaGGGATGGTCACATCAGCCA +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTELGRRW*GWSHQP
Trigger: TGGCTGATGTGACCATCCTCACCATCTTCTGCCTAA...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTGGAACACACTGCCATaGCTAGCCCGGCGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFWNTLP*LARRFP
Trigger: TGGAAAACGCCGGGCTAGTCATGGCAGTGTGTTCCA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAGTGAGATATTCACAATaGGGAAGTCCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKVRYSQ*GSPAST
Trigger: GGTGCTGGCTGGACTTCCTCATTGTGAATATCTCAC...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCACTGCCAGTGGAGTTTTaGATCTTGCAGTCAGACTTG +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASLPVEF*ILQSDL
Trigger: CAAGTCTGACTGCAAGATTCAAAACTCCACTGGCAG...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAAGGACGCATCATAACTaGACATATCCAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASRTHHN*TYPGWS
Trigger: ACTCCAGCCTGGATATGTTCAGTTATGATGCGTCCT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAATGGAAGTTCTGGTCCTaGGAAGTTTGTCTCAGTAAA +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQWKFWS*EVCLSK
Trigger: TTTACTGAGACAAACTTCTCAGGACCAGAACTTCCA...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGTTGCCCTTGAAGAGTTaGAGCCCCACCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTELPLKS*SPTKAK
Trigger: TTTTGCCTTGGTGGGGCTGCAACTCTTCAAGGGCAA...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCGGGCTCATGCCATGGTaGTCCATGGCCATGAAGATG +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFGLMPW*SMAMKM
Trigger: CATCTTCATGGCCATGGAGCACCATGGCATGAGCCC...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCATTTGGCCAACTTCCATaGAGGCCCACATGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASFGQLP*RPTCSQ
Trigger: TTGAGAACATGTGGGCCTGCATGGAAGTTGGCCAAA...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTGCTGCAGCTGCTCCTaGTGTCCTTTGGGGATCACT +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFCCSCS*CPLGIT
Trigger: AGTGATCCCCAAAGGACAGCAGGAGCAGCTGCAGCA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449082.3
CDS-3UTR GCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATCAAGTCTTGCGCACCTaGCAGCCCACATCCCATGGA +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYQVLRT*QPTSHG
Trigger: TCCATGGGATGTGGGCTGGCAGGTGCGCAAGACTTG...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCCCCTCTGGTGCCATTaGTGTTGGGCAGATTGGGGT +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWPLWCH*CWADWG
Trigger: ACCCCAATCTGCCCAACAGCAATGGCACCAGAGGGG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAACCAGAGAGAGTGTCTaGAAAGTCCGAGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKTRESV*KVRESR
Trigger: TCTGCTCTCTCGGACTTTGCAGACACTCTCTCTGGT...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTCGATGGCCAAAGACCTaGATCCGTGCCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPRWPKT*IRARAT
Trigger: GGTGGCCCTGGCACGGATCCAGGTCTTTGGCCATCG...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGTGCAAAGAGCCTGTTTaGTACGATGGCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQCKEPV*YDGQRP
Trigger: AGGTCTTTGGCCATCGTACCAAACAGGCTCTTTGCA...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGAGATGTTCCAGTGCCTaGGCTCCTGGGTGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWRCSSA*APGCQV
Trigger: CACCTGACACCCAGGAGCCCAGGCACTGGAACATCT...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAGCAAAGCTTTCACCGTaGGCTTCTGGTCCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKAKLSP*ASGPGN
Trigger: ATTACCTGGACCAGAAGCCCACGGTGAAAGCTTTGC...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGTCAAAGACAAAACCCTaGAACTTGTTCAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQSKTKP*NLFRGR
Trigger: ACGGCCCCTGAACAAGTTCCAGGGTTTTGTCTTTGA...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATGCCTCCCACCTCACATaGGGAAAGCTGGACATACCG +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYASHLT*GKLDIP
Trigger: CGGTATGTCCAGCTTTCCCCATGTGAGGTGGGAGGC...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCCACAGGTGTTACCCTaGGTCAGAGCAGTTGTCCGA +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFPQVLP*VRAVVR
Trigger: TCGGACAACTGCTCTGACCCAGGGTAACACCTGTGG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCGCTGCTCCTGTCCTTTaGGGATCACTTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFAAPVL*GSLPAG
Trigger: TCCAGCAGGAAGTGATCCCCAAAGGACAGGAGCAGC...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR TCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGGAATGTCCGCAGGCCTaGGATCCCACGGAGATCTAT +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWECPQA*DPTEIY
Trigger: ATAGATCTCCGTGGGATCTCAGGCCTGCGGACATTC...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATATCAGGGCAGTGGCCTaGGTCAGATCCATTGCCACA +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYIRAVA*VRSIAT
Trigger: TGTGGCAATGGATCTGACTCAGGCCACTGCCCTGAT...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCATGAGGCGGAACAGTaGGAGGAAAGCCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFHEAEQ*EESPSK
Trigger: TTTGCTTGGGCTTTCCTCTCACTGTTCCGCCTCATG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTGACTCCCTCAGGGAGTaGGATATCTCGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLADSLRE*DISARG
Trigger: TCCCCTGGCCGAGATATCTCACTCCCTGAGGGAGTC...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATATGGGCAGGACCTGCTaGAGAAGCTGCAAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYMGRTC*RSCKEP
Trigger: AGGCTCTTTGCAGCTTCTTCAGCAGGTCCTGCCCAT...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAATCTTCTATCCCAGATTaGCTCTACTGGAGACCACGA +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKSSIPD*LYWRPR
Trigger: TCGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGA...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCTCCCCGATCAGTTCTaGTGGGAGCTCACCATAGAA +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFLPDQF*WELTIE
Trigger: TTCTATGGTGAGCTCCCAGCAGAACTGATCGGGGAG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCGGTGATGGTGAGCTCTaGAAAGGGATCCGTCACAAG +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFGDGEL*KGIRHK
Trigger: CTTGTGACGGATCCCTTTGCAGAGCTCACCATCACC...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGGGGCTCATGCCATGGTaGTCCATGGCCATGAAGATG +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWGLMPW*SMAMKM
Trigger: CATCTTCATGGCCATGGAGCACCATGGCATGAGCCC...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAATTTGGCCAACTTCCATaGAGGCCCACATGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKFGQLP*RPTCSQ
Trigger: TTGAGAACATGTGGGCCTGCATGGAAGTTGGCCAAA...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAGGCAGTCCACCGTGCTaGCCTCAGAGGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLGSPPC*PQRSLC
Trigger: ACACAAGCTCCTCTGAGGGCAGCACGGTGGACTGCC...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGGCTTTCAAGTCCAGCTaGGGCCGAGGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWAFKSS*GRGFSS
Trigger: AGAAGAGAAGCCTCGGCCCCAGCTGGACTTGAAAGC...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGAAACTGAACCACGAGTaGACAGACACTTTGATGGCC +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEKLNHE*TDTLMA
Trigger: GGCCATCAAAGTGTCTGTCCACTCGTGGTTCAGTTT...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGCTTCAATTTCATCAGTaGTTGCCTGGTTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQLQFHQ*LPGSAP
Trigger: AGGAGCAGAACCAGGCAACCACTGATGAAATTGAAG...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGGATCCATTGTGGGAGTaGAGAGAGGTTGTGTCAATC +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEDPLWE*REVVSI
Trigger: GATTGACACAACCTCTCTCCACTCCCACAATGGATC...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGACGATGTTGCCTATCTaGAGCATGGCTTCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTETMLPI*SMASKV
Trigger: TACCTTCGAAGCCATGCTCCAGATAGGCAACATCGT...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCTTGGAGCTGGAGAGTaGGAGTTTCACCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWLGAGE*EFHHQL
Trigger: GAGCTGGTGGTGAAACTCCCACTCTCCAGCTCCAAG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCTCCTGGGTGTCAGGTaGTCCCCACACCTCTCGACT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLALLGVR*SPHLST
Trigger: AGTCGAGAGGTGTGGGGACCACCTGACACCCAGGAG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCCAGCCCACATCCCATaGACTCTTGGTGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWPAHIP*TLGGIQ
Trigger: CTGGATACCACCAAGAGTCCATGGGATGTGGGCTGG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGATGATGCCTACGGCTaGGCTCCCACAGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPDDAYG*APTVPS
Trigger: AGAGGGGACTGTGGGAGCCCAGCCGTAGGCATCATC...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAATCAGTATATTTCGATTaGGTTTTGGGATTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQSVYFD*VLGFSG
Trigger: CCCTGAGAATCCCAAAACCCAATCGAAATATACTGA...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAGCTTCCATCGGAGAGTaGTTGCTATTGGTTCATAGG +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKASIGE*LLLVHR
Trigger: CCTATGAACCAATAGCAACCACTCTCCGATGGAAGC...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGCTCTGGGCACACATaGGGTGTTAGAGAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFSSGHT*GVRECH
Trigger: ATGGCACTCTCTAACACCCCATGTGTGCCCAGAGCT...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAACGGTGGGAATGATGTaGCAGAAGCAGTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASTVGMM*QKQFQI
Trigger: AATCTGAAACTGCTTCTGCCACATCATTCCCACCGT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTTAGGCAGAAGATGGTaGGGATGGTCACATCAGCCA +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFLGRRW*GWSHQP
Trigger: TGGCTGATGTGACCATCCTCACCATCTTCTGCCTAA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTCAGGGTTGCTGGGTTaGGGAAGAGGGCTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLASGLLG*GRGLLG
Trigger: CCCTAGAAGCCCTCTTCCTCAACCCAGCAACCCTGA...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCAAAGAGAATTGTCTTaGGCTTCACCCACATGGGGC +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFQRELS*ASPTWG
Trigger: GCCCCATGTGGGTGAAGCTCAAGACAATTCTCTTTG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGGAATGCATCCTTCTGTaGAGCAGTCATCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEECILL*SSHLVL
Trigger: AAGAACCAGATGACTGCTTCACAGAAGGATGCATTC...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCACCACAAAGAACTGGTTaGTTTTGCCCAGAATTTTCG +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASPQRTG*FCPEFS
Trigger: CGAAAATTCTGGGCAAAATCAACCAGTTCTTTGTGG...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCCAGTTCTGACATTGTaGCCAGTGGCATGCATTGGT +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFPVLTL*PVACIG
Trigger: ACCAATGCATGCCACTGGTCACAATGTCAGAACTGG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGTGCTTGGCAGCAATTTaGTTCTCTATCTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTECLAAI*FSISTS
Trigger: ACTGGTGGAGATAGAGAAGCAAATTGCTGCCAAGCA...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTTGCCCTTGAAGAGTTaGAGCCCCACCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFLPLKS*SPTKAK
Trigger: TTTTGCCTTGGTGGGGCTGCAACTCTTCAAGGGCAA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGGTAAGGGGTCAGAAGTaGCTCGCTTATTTATGTAGA +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQVRGQK*LAYLCR
Trigger: TCTACATAAATAAGCGAGGCACTTCTGACCCCTTAC...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCTGAGTCAGATCCATTaGCACACAGTAAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFLSQIH*HTVRGQ
Trigger: CTGACCCCTTACTGTGTGGCAATGGATCTGACTCAG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTGTTCATCTTCTCCATaGCTGGAGTCAGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFCSSSP*LESGLL
Trigger: CAGCAACCCTGACTCCAGGCATGGAGAAGATGAACA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGGGTGATGGTGAGCTCTaGAAAGGGATCCGTCACAAG +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWGDGEL*KGIRHK
Trigger: CTTGTGACGGATCCCTTTGCAGAGCTCACCATCACC...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTTCTTCCAGGTCATCTaGCAGCTCAGGGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFFFQVI*QLRDLP
Trigger: AGGAAGATCCCTGAGCTGGCAGATGACCTGGAAGAA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCAAGTCTTGCGCACCTaGCAGCCCACATCCCATGGA +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVQVLRT*QPTSHG
Trigger: TCCATGGGATGTGGGCTGGCAGGTGCGCAAGACTTG...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTGGGGTGTTAGAGAGTaGCATGGAGCGGTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVWGVRE*HGAVQH
Trigger: GTGCTGCACCGCTCCATGGCACTCTCTAACACCCCA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATATTCACCCTCAGCAATaGGCACAGAGACCCACACAG +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYIHPQQ*AQRPTQ
Trigger: CTGTGTGGGTCTCTGTGCCCATTGCTGAGGGTGAAT...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGATTTCGATTGGGTTTTaGGATTCTCAGGGGACCAGA +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEISIGF*DSQGTR
Trigger: TCTGGTCCCCTGAGAATCCCAAAACCCAATCGAAAT...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAATCAGGGCAGTGGCCTaGGTCAGATCCATTGCCACA +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLIRAVA*VRSIAT
Trigger: TGTGGCAATGGATCTGACTCAGGCCACTGCCCTGAT...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTGGAACACACTGCCATaGCTAGCCCGGCGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVWNTLP*LARRFP
Trigger: TGGAAAACGCCGGGCTAGTCATGGCAGTGTGTTCCA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAAGGATTTGGCCAGCTTaGATACGCGCAGCAAGCGGA +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLRIWPA*IRAASG
Trigger: TCCGCTTGCTGCGCGTATTCAAGCTGGCCAAATCCT...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTATGGGCAGGACCTGCTaGAGAAGCTGCAAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPMGRTC*RSCKEP
Trigger: AGGCTCTTTGCAGCTTCTTCAGCAGGTCCTGCCCAT...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCCCTCAGCAGGGACCTaGGGAACAGACTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLAPSAGT*GTDSSF
Trigger: GAAAGATGAGTCTGTTCCTCAGGTCCCTGCTGAGGG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGACGTTTTCTGTGAGATaGGTAGTTGGTTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQTFSVR*VVGCLI
Trigger: AATGAGACAACCAACTACTCATCTCACAGAAAACGT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR GCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTCCTCCCACTTGGGTTaGATGTTGACCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLASSHLG*MLTSRE
Trigger: TTCCCGGGAGGTCAACATGCAACCCAAGTGGGAGGA...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTATCCTCCCACTTGGGTTaGATGTTGACCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLSSHLG*MLTSRE
Trigger: TTCCCGGGAGGTCAACATGCAACCCAAGTGGGAGGA...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTATCGACTTGCTGCAGCTaGTCCTGTCCTTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLSTCCS*SCPLGI
Trigger: GATCCCCAAAGGACAGGAGCAGCTGCAGCAAGTCGA...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCAAAGGTGATCCATTGTaGGAGTGGAGAGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFKGDPL*EWREVV
Trigger: CACAACCTCTCTCCACTCCCACAATGGATCACCTTT...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCCCCGATGGCTTTCGTaGTCTCCAGGAAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLAPRWLS*SPGKTP
Trigger: TGGAGTCTTTCCTGGAGACCACGAAAGCCATCGGGG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAAGCAGAGAGCCCCGATaGCTTTCGTGGTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVSREPR*LSWSPG
Trigger: TCCTGGAGACCACGAAAGCCATCGGGGCTCTCTGCT...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCTAGTGGGCGGCGGTTaGTGTTCATCTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLALVGGG*CSSSPC
Trigger: GCATGGAGAAGATGAACACCAACCGCCGCCCACTAG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACACTCATTGCCCTTTaGGCCCGGAAAGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWTLIAL*ARKGSS
Trigger: AGATGAACCTTTCCGGGCCCAAAGGGCAATGAGTGT...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAACAGGCTTCCCTTCTTaGCCACGCCCAGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVTGFPS*PRPALA
Trigger: TGCTAGAGCTGGGCGTGGCCAAGAAGGGAAGCCTGT...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGGCATATGGATTTTTaGCCAACTTCCATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFRHMDF*PTSMQA
Trigger: GGCCTGCATGGAAGTTGGCCAAAAATCCATATGCCT...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCTTGGAGCTGGAGAGTaGGAGTTTCACCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLALGAGE*EFHHQL
Trigger: GAGCTGGTGGTGAAACTCCCACTCTCCAGCTCCAAG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGGCTCCTGCTGTCCTTTaGGGATCACTTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVAPAVL*GSLPAG
Trigger: TCCAGCAGGAAGTGATCCCCAAAGGACAGCAGGAGC...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449082.3
CDS-3UTR CCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATCATCCCATGGACTCTTaGTGGTATCCAGTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYHPMDS*WYPVCS
Trigger: GCTGCAAACTGGATACCACCAAGAGTCCATGGGATG...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCATGTCAAAAGCTTGTCTaGTCACGATGTCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASCQKLV*SRCQRQ
Trigger: TTGTCTTTGACATCGTGACCAGACAAGCTTTTGACA...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAAAAGGCAGGTCCATCTaGATCAGTATATTTCGATTG +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASKGRSI*ISIFRL
Trigger: CAATCGAAATATACTGATCCAGATGGACCTGCCTTT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCACAATCAGCTCCATACTaGTGGCTTCATCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: AGCDLQWERVNTEQKDASQSAPY*WLHLHF
Trigger: AAAATGAAGATGAAGCCACCAGTATGGAGCTGATTG...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAACACAGAGGACTACCTTaGACCTTCAGTAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKHRGLP*TFSNVL
Trigger: AAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTG...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACATGAGGCGGAACAGTaGGAGGAAAGCCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLHEAEQ*EESPSK
Trigger: TTTGCTTGGGCTTTCCTCTCACTGTTCCGCCTCATG...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGAGGAATCCTGTGTCATaGGGCGGAACAGTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVRNPVS*GGTVRG
Trigger: TCCTCTCACTGTTCCGCCTCATGACACAGGATTCCT...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTACCCTCAGCAGGGACCTaGGGAACAGACTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVPSAGT*GTDSSF
Trigger: GAAAGATGAGTCTGTTCCTCAGGTCCCTGCTGAGGG...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCGAAAAGGTAATAAACTaGGTGGCCTCTGGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFEKVIN*VASGSN
Trigger: GTTTGACCCAGAGGCCACTCAGTTTATTACCTTTTC...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGAGGACGCATCATAACTaGACATATCCAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWRTHHN*TYPGWS
Trigger: ACTCCAGCCTGGATATGTTCAGTTATGATGCGTCCT...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGACTTGGGCAGCTGGTTaGAGGCTTTCAAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVTWAAG*RLSSPA
Trigger: AGCTGGACTTGAAAGCCTGCAACCAGCTGCCCAAGT...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTCTTCTTTTGTCCTaGATCGAATGCCGAGACATC +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFSLLLS*IECRDI
Trigger: GATGTCTCGGCATTCGATGCAGGACAAAAGAAGACT...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTATGGTGGTATCCAGTTTaGAGCAGGGACAGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLWWYPV*SRDSGE
Trigger: TTCGCCACTGTCCCTGCTGCAAACTGGATACCACCA...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTATACGGTAGCAAGTCTTaGGCACCTGCCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVYGSKS*APASPH
Trigger: ATGTGGGCTGGCAGGTGCGCAAGACTTGCTACCGTA...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCCACCACCACCCGCATaGCTTCAAATCGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVPPPPA*LQIEKE
Trigger: CTCTTTCTCGATTTGAAGGCATGCGGGTGGTGGTGG...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCCAATCTCTGTATGGTaGTCCACAGAGGACTACCTT +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWPISVW*STEDYL
Trigger: AAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTACCAGATTGCCTCTACTaGAGACCACGAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVPDCLY*RPRAPG
Trigger: TCCAGGAGCTCGTGGTCTCCAGTAGAGGCAATCTGG...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACGAGGCTTCTCTTCTTaGTCCTTCTGCTCCCTATGC +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLRGFSS*SFCSLC
Trigger: GCATAGGGAGCAGAAGGACCAAGAAGAGAAGCCTCG...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATGATCCATTGTGGGAGTaGAGAGAGGTTGTGTCAATC +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYDPLWE*REVVSI
Trigger: GATTGACACAACCTCTCTCCACTCCCACAATGGATC...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGAAAGGTGATCCATTGTaGGAGTGGAGAGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWKGDPL*EWREVV
Trigger: CACAACCTCTCTCCACTCCCACAATGGATCACCTTT...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCATTTGTTGTCTTCTGTaGAGCCCTCTGACACTCTTG +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFICCLL*SPLTLL
Trigger: CAAGAGTGTCAGAGGGCTCCACAGAAGACAACAAAT...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACATCTTCTCCATGCCTaGAGTCAGGGTTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLHLLHA*SQGCWV
Trigger: AACCCAGCAACCCTGACTCCAGGCATGGAGAAGATG...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGGCCTGTTTGGTACGATaGCCAAAGACCTGGATCCGT +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVACLVR*PKTWIR
Trigger: ACGGATCCAGGTCTTTGGCCATCGTACCAAACAGGC...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTCTCAGCCTTGGAGCTaGAGAGTGGGAGTTTCACCA +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLASQPWS*RVGVSP
Trigger: TGGTGAAACTCCCACTCTCCAGCTCCAAGGCTGAGA...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTTGTGGTTCTCAGCCTTaGAGCTGGAGAGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPCGSQP*SWRVGV
Trigger: AACTCCCACTCTCCAGCTCCAAGGCTGAGAACCACA...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGATTCACCCTCAGCAATaGGCACAGAGACCCACACAG +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVIHPQQ*AQRPTQ
Trigger: CTGTGTGGGTCTCTGTGCCCATTGCTGAGGGTGAAT...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATTCAAAGACAAAACCCTaGAACTTGTTCAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYSKTKP*NLFRGR
Trigger: ACGGCCCCTGAACAAGTTCCAGGGTTTTGTCTTTGA...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAAGCTCTGGGCACACATaGGGTGTTAGAGAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLSSGHT*GVRECH
Trigger: ATGGCACTCTCTAACACCCCATGTGTGCCCAGAGCT...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAAGACTCCATCATCTGTaGCTCCCTCAGGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVRLHHL*LPQGVR
Trigger: TCTCACTCCCTGAGGGAGTCACAGATGATGGAGTCT...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCAAAGAGAATTGTCTTaGGCTTCACCCACATGGGGC +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVQRELS*ASPTWG
Trigger: GCCCCATGTGGGTGAAGCTCAAGACAATTCTCTTTG...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCCAGTTCTGACATTGTaGCCAGTGGCATGCATTGGT +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVPVLTL*PVACIG
Trigger: ACCAATGCATGCCACTGGTCACAATGTCAGAACTGG...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCTCAAAGGCTTTTCATaGCATAGGCCACAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWLKGFS*HRPQVL
Trigger: TAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAGAACTTCTTCTCCTTTaGTTCAATTTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKELLLL*FNFISG
Trigger: ACCACTGATGAAATTGAAGCAAAGGAGAAGAAGTTC...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTACCCCTAGGAGCTGCTTaGCAACCAGAGCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVPLGAA*QPEQRQ
Trigger: TTGTCTTTGCTCTGGTTGGCAAGCAGCTCCTAGGGG...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTTTTCCCCTAGGAGCTaGTTGCCAACCAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLAFSPRS*LPTRAK
Trigger: CTTTGCTCTGGTTGGCAAGCAGCTCCTAGGGGAAAA...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCTTCTCCTCCATATTTaGCTTCAGAGAATCCAACTC +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFLLLHI*LQRIQL
Trigger: GAGTTGGATTCTCTGAAGGCAAATATGGAGGAGAAG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTTTCGAGGGATCCAATaGGGAATTCCATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFFRGIQ*GIPSSH
Trigger: ATGAGAAGATGGAATTCCCCATTGGATCCCTCGAAA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCCGATCAGTTCTGCTaGGAGCTCACCATAGAACTT +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLPDQFC*ELTIEL
Trigger: AAGTTCTATGGTGAGCTCCCAGCAGAACTGATCGGG...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGATATTCAATTTTCTCTaGAAGGTCAGTTCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEIFNFL*KVSSGH
Trigger: ATGACCCGAACTGACCTTCCAGAGAAAATTGAATAT...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCTTCAATTTCATCAGTaGTTGCCTGGTTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWLQFHQ*LPGSAP
Trigger: AGGAGCAGAACCAGGCAACCACTGATGAAATTGAAG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTATCTCGAGGGCCTCCTaGAACTTCTTCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLAISRAS*NFFSFA
Trigger: AGCAAAGGAGAAGAAGTTCCAGGAGGCCCTCGAGAT...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGATTTGTTGTCTTCTGTaGAGCCCTCTGACACTCTTG +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWICCLL*SPLTLL
Trigger: CAAGAGTGTCAGAGGGCTCCACAGAAGACAACAAAT...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTACCCATGGACTCTTGGTaGTATCCAGTTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVPMDSW*YPVCSR
Trigger: CCTGCTGCAAACTGGATACCACCAAGAGTCCATGGG...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTGGTTTTCTGTGAGATaGGTAGTTGGTTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFWFSVR*VVGCLI
Trigger: AATGAGACAACCAACTACTCATCTCACAGAAAACCA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449082.3
CDS-3UTR TCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTTCTGTGGAGCCCTCTaGCACTCTTGGCTTTATTCT +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVFCGAL*HSWLYS
Trigger: AGAATAAAGCCAAGAGTGTCAGAGGGCTCCACAGAA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATCCAGAATCTTCGCTGTaGGACTTATCAGTGAGATAT +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYPESSL*DLSVRY
Trigger: ATATCTCACTGATAAGTCTCACAGCGAAGATTCTGG...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACTCCATCGGTATAGTTaGTGCACCTCCAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLLHRYS*CTSKTS
Trigger: GGAAGTTTTGGAGGTGCATCAACTATACCGATGGAG...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTACCCACGGAGATCTATTaGTGTGCCAACATATGCCAG +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVPTEIY*CANICQ
Trigger: CTGGCATATGTTGGCACAGCAATAGATCTCCGTGGG...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCTTCTCCTCCATATTTaGCTTCAGAGAATCCAACTC +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWLLLHI*LQRIQL
Trigger: GAGTTGGATTCTCTGAAGGCAAATATGGAGGAGAAG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCCAATCTCTGTATGGTaGTCCACAGAGGACTACCTT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLAPISVW*STEDYL
Trigger: AAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGAGGCAAGTCTGAGATaGCAAGCTCTGCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPEASLR*QALQRL
Trigger: AAGTCTTTGCAGAGCTTGGCATCTCAGACTTGCCTC...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCCTTCTCATTCTTCTTTaGTGCTCAATCTTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFLLILL*CSILLV
Trigger: GACAAGCAAGATTGAGCAGCAAAGAAGAATGAGAAG...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAAAACTGAACCACGAGTaGACAGACACTTTGATGGCC +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLKLNHE*TDTLMA
Trigger: GGCCATCAAAGTGTCTGTCCACTCGTGGTTCAGTTT...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTATGCCTTCTCTCACTaGCATTTTTGGAGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFYAFSH*HFWRLK
Trigger: CTTTAACCTCCAAAAATGCCAGTGAGAGAAGGCATA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAACACTCATTGCCCTTTaGGCCCGGAAAGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVTLIAL*ARKGSS
Trigger: AGATGAACCTTTCCGGGCCCAAAGGGCAATGAGTGT...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTACGATGTTGCCTATCTaGAGCATGGCTTCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPTMLPI*SMASKV
Trigger: TACCTTCGAAGCCATGCTCCAGATAGGCAACATCGT...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTGCAAAGAGCCTGTTTaGTACGATGGCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVCKEPV*YDGQRP
Trigger: AGGTCTTTGGCCATCGTACCAAACAGGCTCTTTGCA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTACATCCCATGGACTCTTaGTGGTATCCAGTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVHPMDS*WYPVCS
Trigger: GCTGCAAACTGGATACCACCAAGAGTCCATGGGATG...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATAGAAGAAGCTGCCAGTaGAGTTTTGAATCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYRRSCQ*SFESCS
Trigger: ACTGCAAGATTCAAAACTCCACTGGCAGCTTCTTCT...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATCACAGAGGACTACCTTaGACCTTCAGTAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYHRGLP*TFSNVL
Trigger: AAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTG...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTTGCCAATCTCTGTATaGTGCTCCACAGAGGACTAC +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVLPISV*CSTEDY
Trigger: GTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTATTGCCAATCTCTGTATaGTGCTCCACAGAGGACTAC +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLLPISV*CSTEDY
Trigger: GTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAA...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTATTCTGTGGAGCCCTCTaGCACTCTTGGCTTTATTCT +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVFCGAL*HSWLYS
Trigger: AGAATAAAGCCAAGAGTGTCAGAGGGCTCCACAGAA...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGAATGCATCCTTCTGTaGAGCAGTCATCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPECILL*SSHLVL
Trigger: AAGAACCAGATGACTGCTTCACAGAAGGATGCATTC...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTGTGAGACTTATCAGTaGGATATTCACAATGAGGAA +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFCETYQ*DIHNEE
Trigger: TTCCTCATTGTGAATATCTCACTGATAAGTCTCACA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTGCTTGGCAGCAATTTaGTTCTCTATCTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLACLAAI*FSISTS
Trigger: ACTGGTGGAGATAGAGAAGCAAATTGCTGCCAAGCA...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTCCTTCTGCTCCCTATaGTTCTCTCTGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLASFCSL*FSLAFF
Trigger: AAAGAAAGCCAGAGAGAAGCATAGGGAGCAGAAGGA...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCGAACTTCTTCTCCTTTaGTTCAATTTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFELLLL*FNFISG
Trigger: ACCACTGATGAAATTGAAGCAAAGGAGAAGAAGTTC...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTAGTCTTCTTTTGTCCTaGATCGAATGCCGAGACATC +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPSLLLS*IECRDI
Trigger: GATGTCTCGGCATTCGATGCAGGACAAAAGAAGACT...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGGCTGAAATGTCTTCTTaGTTCCATCGGAGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVAEMSS*FHRRVV
Trigger: AACCACTCTCCGATGGAAGCAAGAAGACATTTCAGC...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAAGCTCTGCAAAGACTTaGACTCGTTTGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVSSAKT*TRLSSS
Trigger: TGAGGAGGACAAACGAGTGCAAGTCTTTGCAGAGCT...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGTGTCAAAAGCTTGTCTaGTCACGATGTCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWCQKLV*SRCQRQ
Trigger: TTGTCTTTGACATCGTGACCAGACAAGCTTTTGACA...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATAAAGGCAGGTCCATCTaGATCAGTATATTTCGATTG +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYKGRSI*ISIFRL
Trigger: CAATCGAAATATACTGATCCAGATGGACCTGCCTTT...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATCAATCAGCTCCATACTaGTGGCTTCATCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYQSAPY*WLHLHF
Trigger: AAAATGAAGATGAAGCCACCAGTATGGAGCTGATTG...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTGTGATCTGCAATaGGAAAGAGTTAACACAGAG +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPGCDLQ*ERVNTE
Trigger: CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCC...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCCAGAATCTTCGCTGTaGGACTTATCAGTGAGATAT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLAPESSL*DLSVRY
Trigger: ATATCTCACTGATAAGTCTCACAGCGAAGATTCTGG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCCACAAAGAACTGGTTaGTTTTGCCCAGAATTTTCG +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLAPQRTG*FCPEFS
Trigger: CGAAAATTCTGGGCAAAATCAACCAGTTCTTTGTGG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTTTGAATGACAGTGGCTaGAATGTCTTCTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPLNDSG*NVFLLP
Trigger: TGGAAGCAAGAAGACATTTCAGCCACTGTCATTCAA...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAGATAGGCCTTTTGAATaGCAGTGGCTGAAATGTCTT +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLDRPFE*QWLKCL
Trigger: AAGACATTTCAGCCACTGTCATTCAAAAGGCCTATC...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTGATAGGCCTTTTGAATaGCAGTGGCTGAAATGTCTT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLADRPFE*QWLKCL
Trigger: AAGACATTTCAGCCACTGTCATTCAAAAGGCCTATC...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTACTCAAAGGCTTTTCATaGCATAGGCCACAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVLKGFS*HRPQVL
Trigger: TAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAG...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAAATTTCATCAGTGGTTaGCTGGTTCTGCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLNFISG*LVLLLI
Trigger: TATGAGGAGCAGAACCAGGCAACCACTGATGAAATT...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGAATTTCATCAGTGGTTaGCTGGTTCTGCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVNFISG*LVLLLI
Trigger: TATGAGGAGCAGAACCAGGCAACCACTGATGAAATT...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTTTCGAGGGATCCAATaGGGAATTCCATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLAFRGIQ*GIPSSH
Trigger: ATGAGAAGATGGAATTCCCCATTGGATCCCTCGAAA...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTAATGACCTTCAGGCCTaGGATCACAGAAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLANDLQA*DHRNCF
Trigger: AAAACAGTTTCTGTGATCCCAGGCCTGAAGGTCATT...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGATCTCTCAGGTACGTaGACTCATTTAGACAAAATC +
Preference number: 4 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPDLSGT*THLDKI
Trigger: GATTTTGTCTAAATGAGTTCACGTACCTGAGAGATC...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGAGTATTTATACTCTTTaGTGCTCAATCTTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWSIYTL*CSILLV
Trigger: GACAAGCAAGATTGAGCAGCAAAGAGTATAAATACT...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449082.3
CDS-3UTR GCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCATTCTTCTTTGCTaGTCAATCTTGCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVLILLC*SILLVF
Trigger: GAAGACAAGCAAGATTGAGCAGCAAAGAAGAATGAG...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAAATGACCTTCAGGCCTaGGATCACAGAAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVNDLQA*DHRNCF
Trigger: AAAACAGTTTCTGTGATCCCAGGCCTGAAGGTCATT...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTATGCCTTCTCTCACTaGCATTTTTGGAGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVYAFSH*HFWRLK
Trigger: CTTTAACCTCCAAAAATGCCAGTGAGAGAAGGCATA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTCAGTATATTTCGATTaGGTTTTGGGATTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KRTHDLILKFRREITVEVSVYFD*VLGFSG
Trigger: CCCTGAGAATCCCAAAACCCAATCGAAATATACTGA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR TCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTGTGAGACTTATCAGTaGGATATTCACAATGAGGAA +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLACETYQ*DIHNEE
Trigger: TTCCTCATTGTGAATATCTCACTGATAAGTCTCACA...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTATGCAAGGTAACCCATTaGAACATTATCAAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: CKILNNIANLCMVLHRGLCKVTH*NIIKVD
Trigger: GTCAACTTTGATAATGTTGCAATGGGTTACCTTGCA...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CCA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTATATTCAATTTTCTCTaGAAGGTCAGTTCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: HDLILKFRREITVEVLLAIFNFL*KVSSGH
Trigger: ATGACCCGAACTGACCTTCCAGAGAAAATTGAATAT...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR GCA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTATGCAAGGTAACCCATTaGAACATTATCAAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVCKVTH*NIIKVD
Trigger: GTCAACTTTGATAATGTTGCAATGGGTTACCTTGCA...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS CCA 90 bp GGGCCTTGCTGGCCAGCACCCCCACCCAGCAGCAGAGAGCCCCGATaGCTTTCGTGGTCTCCAGGAAAGACTCCATCATCTGTGACTCCC +
Preference number: 5 (lower is better)
Translates to: GPCWPAPPPSSREPR*LSWSPGKTPSSVTP
Trigger: GGGAGTCACAGATGATGGAGTCTTTCCTGGAGACCACGAAAGCCATCGGGGCTCTCTGCTGCTGGGTGGGGGTGCTGGCCAGCAAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp GGGATGGAGCCAGGTCCTCAGAAGATGTTCCAGTGCCTGGGCTCCTaGGTGTCAGGTGGTCCCCACACCTCTCGACTTGCTGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GMEPGPQKMFQCLGS*VSGGPHTSRLAAAA
Trigger: AGCAGCTGCAGCAAGTCGAGAGGTGTGGGGACCACCTGACACCCAGGAGCCCAGGCACTGGAACATCTTCTGAGGACCTGGCTCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 90 bp GGTTGGTGTTCATCTTCTCCATGCCTGGAGTCAGGGTTGCTGGGTTaGGGAAGAGGGCTTCTAGGGAGGGGGCCTTGCTGGCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: GWCSSSPCLESGLLG*GRGLLGRGPCWPAP
Trigger: GGGTGCTGGCCAGCAAGGCCCCCTCCCTAGAAGCCCTCTTCCTCAACCCAGCAACCCTGACTCCAGGCATGGAGAAGATGAACACCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp TGGCCAGCACCCCCACCCAGCAGCAGAGAGCCCCGATGGCTTTCGTaGTCTCCAGGAAAGACTCCATCATCTGTGACTCCCTCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: WPAPPPSSREPRWLS*SPGKTPSSVTPSGS
Trigger: ACTCCCTGAGGGAGTCACAGATGATGGAGTCTTTCCTGGAGACCACGAAAGCCATCGGGGCTCTCTGCTGCTGGGTGGGGGTGCTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp AGGTCCTCAGAAGATGTTCCAGTGCCTGGGCTCCTGGGTGTCAGGTaGTCCCCACACCTCTCGACTTGCTGCAGCTGCTCCTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: RSSEDVPVPGLLGVR*SPHLSTCCSCSCCP
Trigger: AGGACAGCAGGAGCAGCTGCAGCAAGTCGAGAGGTGTGGGGACCACCTGACACCCAGGAGCCCAGGCACTGGAACATCTTCTGAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449082.3
CDS CCA 90 bp ATCCACCACCACCCGCATGCCTTCAAATCGAGAAAGAGCCCGCAGTaGCCGCAGAGCGCGAAGGGTTCGAAGGGCTTTGATGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: IHHHPHAFKSRKSPQ*PQSAKGSKGFDGSH
Trigger: GTGGCTCCCATCAAAGCCCTTCGAACCCTTCGCGCTCTGCGGCCACTGCGGGCTCTTTCTCGATTTGAAGGCATGCGGGTGGTGGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS-3UTR CAA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGGACAGGCTTCCCTTCTaGGCCACGCCCAGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQDRLPF*ATPSSS
Trigger: GCTAGAGCTGGGCGTGGCCAAGAAGGGAAGCCTGTC...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGAGGGCCACCTGCAGGTaGTTCACCTCCCCATCGTCC +
Preference number: 5 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQRATCR*FTSPSS
Trigger: GGACGATGGGGAGGTGAACAACCTGCAGGTGGCCCT...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS GCA 90 bp ATGGGCACAGAGACCCACACAGTCGGATTAGCGATGAAGTCACTGTaGTCATCCCTGGGGCCTCTGGGAGCTTGGAGCCCTCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: MGTETHTVGLAMKSL*SSLGPLGAWSPPEL
Trigger: GAGCTCTGGAGGGCTCCAAGCTCCCAGAGGCCCCAGGGATGAGCACAGTGACTTCATCGCTAATCCGACTGTGTGGGTCTCTGTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp CTGGAGAGTGGGAGTTTCACCACCAGCTCAGGCTCTGCCTTGGGCTaGGGGAATGGGCAGGACCTGCTGAAGAAGCTGCAAAGAGCCTGT +
Preference number: 5 (lower is better)
Translates to: LESGSFTTSSGSALG*GNGQDLLKKLQRAC
Trigger: ACAGGCTCTTTGCAGCTTCTTCAGCAGGTCCTGCCCATTCCCCCAGCCCAAGGCAGAGCCTGAGCTGGTGGTGAAACTCCCACTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp TCCCCCTGGCAGTGTTGGCAGCAATGTGGTTCTCAGCCTTGGAGCTaGAGAGTGGGAGTTTCACCACCAGCTCAGGCTCTGCCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: SPWQCWQQCGSQPWS*RVGVSPPAQALPWA
Trigger: AGCCCAAGGCAGAGCCTGAGCTGGTGGTGAAACTCCCACTCTCCAGCTCCAAGGCTGAGAACCACATTGCTGCCAACACTGCCAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp CAGAGCTCCCCCTGGCAGTGTTGGCAGCAATGTGGTTCTCAGCCTTaGAGCTGGAGAGTGGGAGTTTCACCACCAGCTCAGGCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: QSSPWQCWQQCGSQP*SWRVGVSPPAQALP
Trigger: AGGCAGAGCCTGAGCTGGTGGTGAAACTCCCACTCTCCAGCTCCAAGGCTGAGAACCACATTGCTGCCAACACTGCCAGGGGGAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp AGGTCCTCAGAAGATGTTCCAGTGCCTGGGCTCCTGGGTGTCAGGTaGTCCCCACACCTCTCGACTTGCTGCAGCTGCTCCTGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: RSSEDVPVPGLLGVR*SPHLSTCCSCSCPL
Trigger: CAAAGGACAGGAGCAGCTGCAGCAAGTCGAGAGGTGTGGGGACCACCTGACACCCAGGAGCCCAGGCACTGGAACATCTTCTGAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643924.1
ENST00000655275.1
CDS GCA 90 bp GGATCTTCCTCAGGATTTCCTCAGGATCTAGGCAGTCCACCGTGCTaGCCTCAGAGGAGCTTGTGTCGTCCACTCCCTCAGCAGGGACCT +
Preference number: 5 (lower is better)
Translates to: GSSSGFPQDLGSPPC*PQRSLCRPLPQQGP
Trigger: AGGTCCCTGCTGAGGGAGTGGACGACACAAGCTCCTCTGAGGGCAGCACGGTGGACTGCCTAGATCCTGAGGAAATCCTGAGGAAGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 90 bp CAGGGATCTTCCTCAGGATTTCCTCAGGATCTAGGCAGTCCACCGTaGTGCCCTCAGAGGAGCTTGTGTCGTCCACTCCCTCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: QGSSSGFPQDLGSPP*CPQRSLCRPLPQQG
Trigger: TCCCTGCTGAGGGAGTGGACGACACAAGCTCCTCTGAGGGCAGCACGGTGGACTGCCTAGATCCTGAGGAAATCCTGAGGAAGATCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp GGGCAGGACCTGCTGAAGAAGCTGCAAAGAGCCTGTTTGGTACGATaGCCAAAGACCTGGATCCGTGCCAGGGCCACCTGCAGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: GQDLLKKLQRACLVR*PKTWIRARATCRLF
Trigger: GAACAACCTGCAGGTGGCCCTGGCACGGATCCAGGTCTTTGGCCATCGTACCAAACAGGCTCTTTGCAGCTTCTTCAGCAGGTCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp AGGGACCTGAGGAACAGACTCATCTTTCCACGTCTCACCCAGGGATaGAGCCAGGTCCTCAGAAGATGTTCCAGTGCCTGGGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: RDLRNRLIFPRLTQG*SQVLRRCSSAWAPG
Trigger: CCCAGGAGCCCAGGCACTGGAACATCTTCTGAGGACCTGGCTCCATCCCTGGGTGAGACGTGGAAAGATGAGTCTGTTCCTCAGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS-3UTR CAA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGGTCAGGGTTGCTGGGTaGAGGAAGAGGGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQVRVAG*RKRASR
Trigger: CCTAGAAGCCCTCTTCCTCAACCCAGCAACCCTGAC...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGGGGGCCTCTGGGAGCTaGGAGCCCTCCAGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQGASGS*EPSRAP
Trigger: GGGAGCTCTGGAGGGCTCCAAGCTCCCAGAGGCCCC...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGGGGGCCTCTGGGAGCTaGGAGCCCTCCAGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEGASGS*EPSRAP
Trigger: GGGAGCTCTGGAGGGCTCCAAGCTCCCAGAGGCCCC...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS TCA 90 bp AGCCCCGATGGCTTTCGTGGTCTCCAGGAAAGACTCCATCATCTGTaGCTCCCTCAGGGAGTGAGATATCTCGGCCAGGGGACCGGAAAT +
Preference number: 5 (lower is better)
Translates to: SPDGFRGLQERLHHL*LPQGVRYLGQGTGN
Trigger: ATTTCCGGTCCCCTGGCCGAGATATCTCACTCCCTGAGGGAGTCACAGATGATGGAGTCTTTCCTGGAGACCACGAAAGCCATCGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 90 bp TGCAGCCTCCTCCTCAGCTCTGGGCACACATGGGGTGTTAGAGAGTaGCATGGAGCGGTGCAGCACATAGCTCCGATAGGCCTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: CSLLLSSGHTWGVRE*HGAVQHIAPIGLLN
Trigger: ATTCAAAAGGCCTATCGGAGCTATGTGCTGCACCGCTCCATGGCACTCTCTAACACCCCATGTGTGCCCAGAGCTGAGGAGGAGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp AGCAAGTCTTGCGCACCTGCCAGCCCACATCCCATGGACTCTTGGTaGTATCCAGTTTGCAGCAGGGACAGTGGCGAATGCATCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SKSCAPASPHPMDSW*YPVCSRDSGECILL
Trigger: CAGAAGGATGCATTCGCCACTGTCCCTGCTGCAAACTGGATACCACCAAGAGTCCATGGGATGTGGGCTGGCAGGTGCGCAAGACTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS-3UTR CAA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCTGCAAAGAGCCTGTTaGGTACGATGGCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQLQRAC*VRWPKT
Trigger: GGTCTTTGGCCATCGTACCAAACAGGCTCTTTGCAG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAATGCCCTCAGAGGAGCTaGTGTCGTCCACTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQCPQRS*CRPLPQ
Trigger: CTGAGGGAGTGGACGACACAAGCTCCTCTGAGGGCA...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAGTCCTCCCACTTGGGTaGCATGTTGACCTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQVLPLG*HVDLPG
Trigger: TCCCGGGAGGTCAACATGCAACCCAAGTGGGAGGAC...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS TCA 90 bp GTGGTCTCCAGGAAAGACTCCATCATCTGTGACTCCCTCAGGGAGTaGGATATCTCGGCCAGGGGACCGGAAATGGAACACACTGCCATG +
Preference number: 5 (lower is better)
Translates to: VVSRKDSIICDSLRE*DISARGPEMEHTAM
Trigger: CATGGCAGTGTGTTCCATTTCCGGTCCCCTGGCCGAGATATCTCACTCCCTGAGGGAGTCACAGATGATGGAGTCTTTCCTGGAGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 90 bp TCCAGCTGGGGCCGAGGCTTCTCTTCTTGGTCCTTCTGCTCCCTATaGTTCTCTCTGGCTTTCTTTGTTCCCTGCTTGGCAGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: SSWGRGFSSWSFCSL*FSLAFFVPCLAAIC
Trigger: GCAAATTGCTGCCAAGCAGGGAACAAAGAAAGCCAGAGAGAAGCATAGGGAGCAGAAGGACCAAGAAGAGAAGCCTCGGCCCCAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS-3UTR CAA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGGTAAAGCGACGGAAGTaGTTAGTTTCGAGGGATCCA +
Preference number: 5 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQVKRRK*LVSRDP
Trigger: TGGATCCCTCGAAACTAACAACTTCCGTCGCTTTAC...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAACTTGGGCAGCTGGTaGCAGGCTTTCAAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQNLGSW*QAFKSS
Trigger: GCTGGACTTGAAAGCCTGCAACCAGCTGCCCAAGTT...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGCAATTTCATCAGTGGTaGCCTGGTTCTGCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQQFHQW*PGSAPH
Trigger: ATGAGGAGCAGAACCAGGCAACCACTGATGAAATTG...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAGAGCGGGGTGATTTGTaGTCTTCTGTGGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQERGDL*SSVEPS
Trigger: AGAGGGCTCCACAGAAGACAACAAATCACCCCGCTC...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAATCAGAGCGGGGTGATTaGTTGTCTTCTGTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQSERGD*LSSVEP
Trigger: GGGCTCCACAGAAGACAACAAATCACCCCGCTCTGA...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGGACAGGCTTCCCTTCTaGGCCACGCCCAGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEDRLPF*ATPSSS
Trigger: GCTAGAGCTGGGCGTGGCCAAGAAGGGAAGCCTGTC...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAATGTGGTTCTCAGCCTaGGAGCTGGAGAGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQMWFSA*ELESGS
Trigger: ACTCCCACTCTCCAGCTCCAAGGCTGAGAACCACAT...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGTGCCCTCAGAGGAGCTaGTGTCGTCCACTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQCPQRS*CRPLPQ
Trigger: CTGAGGGAGTGGACGACACAAGCTCCTCTGAGGGCA...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTATTTCGATTGGGTTTaGGGATTCTCAGGGGACCAG +
Preference number: 5 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQYFDWV*GFSGDQ
Trigger: CTGGTCCCCTGAGAATCCCAAAACCCAATCGAAATA...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAACTGCAAAGAGCCTGTTaGGTACGATGGCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQLQRAC*VRWPKT
Trigger: GGTCTTTGGCCATCGTACCAAACAGGCTCTTTGCAG...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCACTCCCCCTGGCAGTGTaGGCAGCAATGTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: AGCDLQWERVNTEQKDASLPLAV*AAMWFS
Trigger: TGAGAACCACATTGCTGCCAACACTGCCAGGGGGAG...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS TCA 90 bp GTGCCATGGAGCGGTGCAGCACATAGCTCCGATAGGCCTTTTGAATaGCAGTGGCTGAAATGTCTTCTTGCTTCCATCGGAGAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: VPWSGAAHSSDRPFE*QWLKCLLASIGEWL
Trigger: CAACCACTCTCCGATGGAAGCAAGAAGACATTTCAGCCACTGTCATTCAAAAGGCCTATCGGAGCTATGTGCTGCACCGCTCCATGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAATCCCACGGAGATCTATaGCTGTGCCAACATATGCCA +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQSHGDL*LCQHMP
Trigger: TGGCATATGTTGGCACAGCAATAGATCTCCGTGGGA...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGGTTGCCCTTGAAGAGTaGCAGCCCCACCAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQVALEE*QPHQGK
Trigger: TTTGCCTTGGTGGGGCTGCAACTCTTCAAGGGCAAC...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGGGGAGTGGAGAGAGGTaGTGTCAATCCCTAGTGCTG +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQGSGER*CQSLVL
Trigger: CAGCACTAGGGATTGACACAACCTCTCTCCACTCCC...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCAACTAGTGGGCGGCGGTaGGTGTTCATCTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: AGCDLQWERVNTEQKDASTSGRR*VFIFSM
Trigger: CATGGAGAAGATGAACACCAACCGCCGCCCACTAGT...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAACCAAAGAGAATTGTCTaGAGCTTCACCCACATGGGG +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQPKRIV*SFTHMG
Trigger: CCCCATGTGGGTGAAGCTCAAGACAATTCTCTTTGG...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAGAGGCATATGGATTTTaGGCCAACTTCCATGCAGGC +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQEAYGF*ANFHAG
Trigger: GCCTGCATGGAAGTTGGCCAAAAATCCATATGCCTC...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGATGTGGTTCTCAGCCTaGGAGCTGGAGAGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQMWFSA*ELESGS
Trigger: ACTCCCACTCTCCAGCTCCAAGGCTGAGAACCACAT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCCTGGGTCAGAGCAGTaGTCCGACAGCTCTCACATG +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEPGSEQ*SDSSHM
Trigger: CATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGG...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGCTCTTCTATCCCAGATaGCCTCTACTGGAGACCACG +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQLFYPR*PLLETT
Trigger: CGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGAG...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGTTTTTGAGGTTGCCCTaGAAGAGTTGCAGCCCCACC +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQFLRLP*KSCSPT
Trigger: GGTGGGGCTGCAACTCTTCAAGGGCAACCTCAAAAA...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGAACACTCATTGCCCTTaGGGCCCGGAAAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQNTHCP*GPERFI
Trigger: GATGAACCTTTCCGGGCCCAAAGGGCAATGAGTGTT...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAATGGTAAAGACGATGTaGCCTATCTGGAGCATGGCT +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQMVKTM*PIWSMA
Trigger: AGCCATGCTCCAGATAGGCAACATCGTCTTTACCAT...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGCACTTGGGTTGCATGTaGACCTCCCGGGAATCAACA +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQHLGCM*TSREST
Trigger: TGTTGATTCCCGGGAGGTCAACATGCAACCCAAGTG...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGACGTTGTCCTCCCACTaGGGTTGCATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTETLSSH*GCMLTS
Trigger: GGAGGTCAACATGCAACCCAAGTGGGAGGACAACGT...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GGCCACAGGTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCTTCTCATTCTTCTTaGCTGCTCAATCTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GHRCYPGSEQLSDSSHMQSSHSS*LLNLAC
Trigger: ACAAGCAAGATTGAGCAGCAAAGAAGAATGAGAAGA...CTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACACCTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS TCA 90 bp CTTTGTTCCCTGCTTGGCAGCAATTTGCTTCTCTATCTCCACCAGTaGCTCCGGAGTAAAGCGACGGAAGTTGTTAGTTTCGAGGGATCC +
Preference number: 5 (lower is better)
Translates to: LCSLLGSNLLLYLHQ*LRSKATEVVSFEGS
Trigger: GGATCCCTCGAAACTAACAACTTCCGTCGCTTTACTCCGGAGTCACTGGTGGAGATAGAGAAGCAAATTGCTGCCAAGCAGGGAACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 90 bp GCGGTGCAGCACATAGCTCCGATAGGCCTTTTGAATGACAGTGGCTaGAATGTCTTCTTGCTTCCATCGGAGAGTGGTTGCTATTGGTTC +
Preference number: 5 (lower is better)
Translates to: AVQHIAPIGLLNDSG*NVFLLPSESGCYWF
Trigger: GAACCAATAGCAACCACTCTCCGATGGAAGCAAGAAGACATTTCAGCCACTGTCATTCAAAAGGCCTATCGGAGCTATGTGCTGCACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 90 bp TGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCATAACTaGACATATCCAGGCTGGAGTGTTCTCACTAGGGCCCAGGGGCAA +
Preference number: 5 (lower is better)
Translates to: CNGKELTQSRRTHHN*TYPGWSVLTRAQGQ
Trigger: TTGCCCCTGGGCCCTAGTGAGAACACTCCAGCCTGGATATGTTCAGTTATGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS TCA 90 bp CTAGCCAAGAGGCTAGTGTGTGAAGCAAGAAATGAGAGGCAAGTCTaGGATGCCAAGCTCTGCAAAGACTTGCACTCGTTTGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LAKRLVCEARNERQV*DAKLCKDLHSFVLL
Trigger: GAGGAGGACAAACGAGTGCAAGTCTTTGCAGAGCTTGGCATCTCAGACTTGCCTCTCATTTCTTGCTTCACACACTAGCCTCTTGGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS CCA 90 bp GCCGAGGCTTCTCTTCTTGGTCCTTCTGCTCCCTATGCTTCTCTCTaGCTTTCTTTGTTCCCTGCTTGGCAGCAATTTGCTTCTCTATCT +
Preference number: 5 (lower is better)
Translates to: AEASLLGPSAPYASL*LSLFPAWQQFASLS
Trigger: AGATAGAGAAGCAAATTGCTGCCAAGCAGGGAACAAAGAAAGCCAGAGAGAAGCATAGGGAGCAGAAGGACCAAGAAGAGAAGCCTCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp TGCCTTCTCTCACTGGCATTTTTGGAGGTTAAAGGTGATCCATTGTaGGAGTGGAGAGAGGTTGTGTCAATCCCTAGTGCTGCTAGCACC +
Preference number: 5 (lower is better)
Translates to: CLLSLAFLEVKGDPL*EWREVVSIPSAAST
Trigger: GGTGCTAGCAGCACTAGGGATTGACACAACCTCTCTCCACTCCCACAATGGATCACCTTTAACCTCCAAAAATGCCAGTGAGAGAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp TGCGCTGGTTGTAAGGATCAGAGCGGGGTGATTTGTTGTCTTCTGTaGAGCCCTCTGACACTCTTGGCTTTATTCTATGCCTTCTCTCAC +
Preference number: 5 (lower is better)
Translates to: CAGCKDQSGVICCLL*SPLTLLALFYAFSH
Trigger: GTGAGAGAAGGCATAGAATAAAGCCAAGAGTGTCAGAGGGCTCCACAGAAGACAACAAATCACCCCGCTCTGATCCTTACAACCAGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp CTCCAGGGACCAAAGGCAGGTCCATCTGGATCAGTATATTTCGATTaGGTTTTGGGATTCTCAGGGGACCAGAGAGAGTGTCTGCAAAGT +
Preference number: 5 (lower is better)
Translates to: LQGPKAGPSGSVYFD*VLGFSGDQRECLQS
Trigger: ACTTTGCAGACACTCTCTCTGGTCCCCTGAGAATCCCAAAACCCAATCGAAATATACTGATCCAGATGGACCTGCCTTTGGTCCCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCTCTTCTATCCCAGATaGCCTCTACTGGAGACCACG +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTELFYPR*PLLETT
Trigger: CGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGAG...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGTCTCTCTGGCTTTCTTaGTTCCCTGCTTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTESLWLS*FPAWQQ
Trigger: TTGCTGCCAAGCAGGGAACAAAGAAAGCCAGAGAGA...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GTGTTACCCTGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAGGAACTTCTTCTCCTTaGCTTCAATTTCATCAGTGG +
Preference number: 5 (lower is better)
Translates to: VLPWVRAVVRQLSHAVMQGTSSP*LQFHQW
Trigger: CCACTGATGAAATTGAAGCAAAGGAGAAGAAGTTCC...TTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGGGTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTAGGGCCACCTGCAGGTaGTTCACCTCCCCATCGTCC +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPRATCR*FTSPSS
Trigger: GGACGATGGGGAGGTGAACAACCTGCAGGTGGCCCT...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAACATCCCATGGACTCTaGGTGGTATCCAGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKTSHGL*VVSSLQ
Trigger: CTGCAAACTGGATACCACCAAGAGTCCATGGGATGT...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAAAAGGTGGTTACCAGTaGCATTCCCTGCCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKKGGYQ*HSLPSS
Trigger: AGAACTGGGCAGGGAATGCAACTGGTAACCACCTTT...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCCACACCTCTCGACTaGCTGCAGCTGCTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLPTPLD*LQLLLS
Trigger: GGACAGGAGCAGCTGCAGCAAGTCGAGAGGTGTGGG...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGAAGACTTGCACTCGTTaGTCCTCCTCAGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEKTCTR*SSSVTV
Trigger: CACTGTCACTGAGGAGGACAAACGAGTGCAAGTCTT...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS GCA 90 bp AGTGGCCTGAGTCAGATCCATTGCCACACAGTAAGGGGTCAGAAGTaGCTCGCTTATTTATGTAGATATCTTGGTCCCTATGGAAGAGAC +
Preference number: 5 (lower is better)
Translates to: SGLSQIHCHTVRGQK*LAYLCRYLGPYGRD
Trigger: GTCTCTTCCATAGGGACCAAGATATCTACATAAATAAGCGAGGCACTTCTGACCCCTTACTGTGTGGCAATGGATCTGACTCAGGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGGAAATGGTCCTCCCTTaGTTCAGCACCATAAATGTC +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQEMVLP*FSTINV
Trigger: GACATTTATGGTGCTGAACAAAGGGAGGACCATTTC...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAATTTCATCAGTGGTaGCCTGGTTCTGCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEQFHQW*PGSAPH
Trigger: ATGAGGAGCAGAACCAGGCAACCACTGATGAAATTG...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAGTTAAAGGTGATCCATaGTGGGAGTGGAGAGAGGTT +
Preference number: 5 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKVKGDP*WEWREV
Trigger: AACCTCTCTCCACTCCCACAATGGATCACCTTTAAC...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAAGCCCTCTGACACTCTaGGCTTTATTCTATGCCTTC +
Preference number: 5 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKSPLTL*ALFYAF
Trigger: GAAGGCATAGAATAAAGCCAAGAGTGTCAGAGGGCT...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATTCAGAGCGGGGTGATTaGTTGTCTTCTGTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYSERGD*LSSVEP
Trigger: GGGCTCCACAGAAGACAACAAATCACCCCGCTCTGA...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACTAGTGGGCGGCGGTaGGTGTTCATCTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWTSGRR*VFIFSM
Trigger: CATGGAGAAGATGAACACCAACCGCCGCCCACTAGT...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGCAAGAAAGTCTTCTTTaGTCCTGCATCGAATGCCGA +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQQESLL*SCIECR
Trigger: TCGGCATTCGATGCAGGACAAAAGAAGACTTTCTTG...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAGTCCTCCCACTTGGGTaGCATGTTGACCTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLVLPLG*HVDLPG
Trigger: TCCCGGGAGGTCAACATGCAACCCAAGTGGGAGGAC...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACGTTGTCCTCCCACTaGGGTTGCATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWTLSSH*GCMLTS
Trigger: GGAGGTCAACATGCAACCCAAGTGGGAGGACAACGT...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCACGTCTTTTCTTCACTTaGGTCATCAGTCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: AGCDLQWERVNTEQKDASRLFFT*VISLHH
Trigger: ATGGTGGAGACTGATGACCAAAGTGAAGAAAAGACG...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAATCCATCGGAGAGTGGTaGCTATTGGTTCATAGGATG +
Preference number: 5 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKSIGEW*LLVHRM
Trigger: CATCCTATGAACCAATAGCAACCACTCTCCGATGGA...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS CCA 90 bp TCCTCAAGGACGGAGGTTATGATACTGACAACACTCATTGCCCTTTaGGCCCGGAAAGGTTCATCTAAGTATTCTGCTGACAAGAAAGTC +
Preference number: 5 (lower is better)
Translates to: SSRTEVMILTTLIAL*ARKGSSKYSADKKV
Trigger: GACTTTCTTGTCAGCAGAATACTTAGATGAACCTTTCCGGGCCCAAAGGGCAATGAGTGTTGTCAGTATCATAACCTCCGTCCTTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGTTCTTTGTTCCCTGCTaGGCAGCAATTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEFFVPC*AAICFS
Trigger: AGAGAAGCAAATTGCTGCCAAGCAGGGAACAAAGAA...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAGTCAGGGTTGCTGGGTaGAGGAAGAGGGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLVRVAG*RKRASR
Trigger: CCTAGAAGCCCTCTTCCTCAACCCAGCAACCCTGAC...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCCCCCTGGCAGTGTaGGCAGCAATGTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVLPLAV*AAMWFS
Trigger: TGAGAACCACATTGCTGCCAACACTGCCAGGGGGAG...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTGCTCCTGCTGTCCTTaGGGGATCACTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVCSCCP*GITSCW
Trigger: CCAGCAGGAAGTGATCCCCAAAGGACAGCAGGAGCA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449082.3
CDS-3UTR CAA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCACTTGGGTTGCATGTaGACCTCCCGGGAATCAACA +
Preference number: 5 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWHLGCM*TSREST
Trigger: TGTTGATTCCCGGGAGGTCAACATGCAACCCAAGTG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCAAAGGTGGTTACCAGTaGCATTCCCTGCCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFKGGYQ*HSLPSS
Trigger: AGAACTGGGCAGGGAATGCAACTGGTAACCACCTTT...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTCCTGGGTCAGAGCAGTaGTCCGACAGCTCTCACATG +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPPGSEQ*SDSSHM
Trigger: CATGTGAGAGCTGTCGGACAACTGCTCTGACCCAGG...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS GCA 90 bp AGTGGCCTGAGTCAGATCCATTGCCACACAGTAAGGGGTCAGAAGTaGCTCGCTTATTTATGTAGATATCTGGTTTTCTGTGAGATGAGT +
Preference number: 5 (lower is better)
Translates to: SGLSQIHCHTVRGQK*LAYLCRYLVFCEMS
Trigger: ACTCATCTCACAGAAAACCAGATATCTACATAAATAAGCGAGGCACTTCTGACCCCTTACTGTGTGGCAATGGATCTGACTCAGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000643924.1
CDS CCA 90 bp CTGACACTCTTGGCTTTATTCTATGCCTTCTCTCACTGGCATTTTTaGAGGTTAAAGGTGATCCATTGTGGGAGTGGAGAGAGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: LTLLALFYAFSHWHF*RLKVIHCGSGERLC
Trigger: ACACAACCTCTCTCCACTCCCACAATGGATCACCTTTAACCTCCAAAAATGCCAGTGAGAGAAGGCATAGAATAAAGCCAAGAGTGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS-3UTR CAA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCCGAGGCTTCTCTTCTaGGTCCTTCTGCTCCCTATG +
Preference number: 5 (lower is better)
Translates to: HDLILKFRREITVEVLLAPRLLF*VLLLPM
Trigger: CATAGGGAGCAGAAGGACCAAGAAGAGAAGCCTCGG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTCCGAGGCTTCTCTTCTaGGTCCTTCTGCTCCCTATG +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPPRLLF*VLLLPM
Trigger: CATAGGGAGCAGAAGGACCAAGAAGAGAAGCCTCGG...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGAACTTGGGCAGCTGGTaGCAGGCTTTCAAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVNLGSW*QAFKSS
Trigger: GCTGGACTTGAAAGCCTGCAACCAGCTGCCCAAGTT...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTGTTGCCCTTGAAGAGTaGCAGCCCCACCAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: HDLILKFRREITVEVLLAVALEE*QPHQGK
Trigger: TTTGCCTTGGTGGGGCTGCAACTCTTCAAGGGCAAC...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAGGGAGTGGAGAGAGGTaGTGTCAATCCCTAGTGCTG +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLGSGER*CQSLVL
Trigger: CAGCACTAGGGATTGACACAACCTCTCTCCACTCCC...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTCCCCTAGGAGCTGCTaGCCAACCAGAGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVSPRSC*PTRAKT
Trigger: TGTCTTTGCTCTGGTTGGCAAGCAGCTCCTAGGGGA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTTCCCCTAGGAGCTGCTaGCCAACCAGAGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPSPRSC*PTRAKT
Trigger: TGTCTTTGCTCTGGTTGGCAAGCAGCTCCTAGGGGA...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTTTGGTGGTATCCAGTTaGCAGCAGGGACAGTGGCGA +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPLVVSS*QQGQWR
Trigger: TCGCCACTGTCCCTGCTGCAAACTGGATACCACCAA...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAGGAGAGTGGTTGCTATaGGTTCATAGGATGATTTTG +
Preference number: 5 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKGEWLL*VHRMIL
Trigger: CAAAATCATCCTATGAACCAATAGCAACCACTCTCC...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGGGTCAGAGCAGGAAGCAGTTTCAGATTaGTCTGGGAGTACACAATTT +
Preference number: 5 (lower is better)
Translates to: ISKAFHDIGHRCYPGSEQEAVSD*SGSTQF
Trigger: AAATTGTGTACTCCCAGACAAATCTGAAACTGCTTC...CTGCTCTGACCCAGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp GCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGCAGAAGGACGCATCATCTTGTTCTATATCTTaGGAAGTTCTGGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: AGCDLQWERVNTEQKDASSCSIS*EVLVLR
Trigger: TCTCAGGACCAGAACTTCCAAAGATATAGAACAAGA...TGATGCGTCCTTCTGCTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS TCA 90 bp AGGGGCAATCAGCTCCATACTGGTGGCTTCATCTTCATTTTGTATTaGGCTAGATGTCCTCATGTTGACTCTATCACTAAGGCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: RGNQLHTGGFIFILY*ARCPHVDSITKASS
Trigger: ACTAGAGGCCTTAGTGATAGAGTCAACATGAGGACATCTAGCTCAATACAAAATGAAGATGAAGCCACCAGTATGGAGCTGATTGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 90 bp ATCTTGGTCCCTATGGAAGAGACTCCACTCACGTTTTCTGTGAGATaGGTAGTTGGTTGTCTCATTGACAGCCATGTCATTCTTGACACA +
Preference number: 5 (lower is better)
Translates to: ILVPMEETPLTFSVR*VVGCLIDSHVILDT
Trigger: TGTGTCAAGAATGACATGGCTGTCAATGAGACAACCAACTACTCATCTCACAGAAAACGTGAGTGGAGTCTCTTCCATAGGGACCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS GCA 90 bp TTGCTTGTCTTCTACGTAAGAAATATCTTCTCTTCTATCCCAGATTaGCTCTACTGGAGACCACGAGCTCCTGGAACATACGTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: LLVFYVRNIFSSIPD*LYWRPRAPGTYVQL
Trigger: AAGCTGAACGTATGTTCCAGGAGCTCGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGAGAAGATATTTCTTACGTAGAAGACAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTATTTTTGAGGTTGCCCTaGAAGAGTTGCAGCCCCACC +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLFLRLP*KSCSPT
Trigger: GGTGGGGCTGCAACTCTTCAAGGGCAACCTCAAAAA...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAGAGCGGGGTGATTTGTaGTCTTCTGTGGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVERGDL*SSVEPS
Trigger: AGAGGGCTCCACAGAAGACAACAAATCACCCCGCTC...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAAACACTCATTGCCCTTaGGGCCCGGAAAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLNTHCP*GPERFI
Trigger: GATGAACCTTTCCGGGCCCAAAGGGCAATGAGTGTT...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTATTGGTGGTATCCAGTTaGCAGCAGGGACAGTGGCGA +
Preference number: 5 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVLVVSS*QQGQWR
Trigger: TCGCCACTGTCCCTGCTGCAAACTGGATACCACCAA...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATTATTTCGATTGGGTTTaGGGATTCTCAGGGGACCAG +
Preference number: 5 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYYFDWV*GFSGDQ
Trigger: CTGGTCCCCTGAGAATCCCAAAACCCAATCGAAATA...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGATCAGTATATTTCGATaGGGTTTTGGGATTCTCAGG +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEISIFR*GFGILR
Trigger: CCTGAGAATCCCAAAACCCAATCGAAATATACTGAT...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAATCTTGTTCTATATCTTaGGAAGTTCTGGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKSCSIS*EVLVLR
Trigger: TCTCAGGACCAGAACTTCCAAAGATATAGAACAAGA...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS TCA 90 bp AAGCAGTTTCAGATTTGTCTGGGAGTACACAATTTTCATTTGCTGTaGATGCAACAAAACCTTCATCTGGGAGTGATGCAGCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: KQFQICLGVHNFHLL*MQQNLHLGVMQPPP
Trigger: AGGAGGAGGCTGCATCACTCCCAGATGAAGGTTTTGTTGCATTCACAGCAAATGAAAATTGTGTACTCCCAGACAAATCTGAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 90 bp TTCTACGTAAGAAATATCTTCTCTTCTATCCCAGATTGCCTCTACTaGAGACCACGAGCTCCTGGAACATACGTTCAGCTTAACATTCAG +
Preference number: 5 (lower is better)
Translates to: FYVRNIFSSIPDCLY*RPRAPGTYVQLNIQ
Trigger: CTGAATGTTAAGCTGAACGTATGTTCCAGGAGCTCGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGAGAAGATATTTCTTACGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTCTGCTTGGCAGCAATTaGCTTCTCTATCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPLLGSN*LLYLHQ
Trigger: CTGGTGGAGATAGAGAAGCAAATTGCTGCCAAGCAG...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTCTCTCTGGCTTTCTTaGTTCCCTGCTTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVSLWLS*FPAWQQ
Trigger: TTGCTGCCAAGCAGGGAACAAAGAAAGCCAGAGAGA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCCAAAGAGAATTGTCTaGAGCTTCACCCACATGGGG +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVPKRIV*SFTHMG
Trigger: CCCCATGTGGGTGAAGCTCAAGACAATTCTCTTTGG...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGGAGGCATATGGATTTTaGGCCAACTTCCATGCAGGC +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVEAYGF*ANFHAG
Trigger: GCCTGCATGGAAGTTGGCCAAAAATCCATATGCCTC...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTACATCCCATGGACTCTaGGTGGTATCCAGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPTSHGL*VVSSLQ
Trigger: CTGCAAACTGGATACCACCAAGAGTCCATGGGATGT...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTGGTGAGGCTGTAGCTGGGTGTGATCTGCAATGGGAAAGAGTTAACACAGAGATCTTGCAGTCAGACTaGTTATTCACAATCGACAAA +
Preference number: 5 (lower is better)
Translates to: IGEAVAGCDLQWERVNTEILQSD*LFTIDK
Trigger: TTTGTCGATTGTGAATAACAAGTCTGACTGCAAGAT...CTCTGTGTTAACTCTTTCCCATTGCAGATCACACCCAGCTACAGCCTCACCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATCGTCTTTTCTTCACTTaGGTCATCAGTCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYRLFFT*VISLHH
Trigger: ATGGTGGAGACTGATGACCAAAGTGAAGAAAAGACG...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGCTAGATGTCCTCATGTaGACTCTATCACTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWLDVLM*TLSLRP
Trigger: AGGCCTTAGTGATAGAGTCAACATGAGGACATCTAG...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGAAGCTCTGCAAAGACTaGCACTCGTTTGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVKLCKD*HSFVLL
Trigger: GAGGAGGACAAACGAGTGCAAGTCTTTGCAGAGCTT...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CAA 90 bp TGGGTCAGAGCAGTTGTCCGACAGCTCTCACATGCAGTCATGCAAAATCCTAAAATTTATGTAGATATCTaGGTCCCTATGGAAGAGACT +
Preference number: 5 (lower is better)
Translates to: WVRAVVRQLSHAVMQNPKIYVDI*VPMEET
Trigger: AGTCTCTTCCATAGGGACCAAGATATCTACATAAAT...TTTAGGATTTTGCATGACTGCATGTGAGAGCTGTCGGACAACTGCTCTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTATCCCACGGAGATCTATaGCTGTGCCAACATATGCCA +
Preference number: 5 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVSHGDL*LCQHMP
Trigger: TGGCATATGTTGGCACAGCAATAGATCTCCGTGGGA...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTGTTAAAGGTGATCCATaGTGGGAGTGGAGAGAGGTT +
Preference number: 5 (lower is better)
Translates to: HDLILKFRREITVEVLLAVKGDP*WEWREV
Trigger: AACCTCTCTCCACTCCCACAATGGATCACCTTTAAC...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAAGCCCTCTGACACTCTaGGCTTTATTCTATGCCTTC +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLSPLTL*ALFYAF
Trigger: GAAGGCATAGAATAAAGCCAAGAGTGTCAGAGGGCT...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAATGGTAAAGACGATGTaGCCTATCTGGAGCATGGCT +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLMVKTM*PIWSMA
Trigger: AGCCATGCTCCAGATAGGCAACATCGTCTTTACCAT...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCTCGAAGGCAATGATTTaGAAGACCATTTCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFSKAMI*KTISAV
Trigger: TACTGCTGAAATGGTCTTCAAAATCATTGCCTTCGA...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCATCAGTATATTTCGATaGGGTTTTGGGATTCTCAGG +
Preference number: 5 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFISIFR*GFGILR
Trigger: CCTGAGAATCCCAAAACCCAATCGAAATATACTGAT...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTATCCATCGGAGAGTGGTaGCTATTGGTTCATAGGATG +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLSIGEW*LLVHRM
Trigger: CATCCTATGAACCAATAGCAACCACTCTCCGATGGA...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCGAAGCAGTTTCAGATTaGTCTGGGAGTACACAATTT +
Preference number: 5 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFEAVSD*SGSTQF
Trigger: AAATTGTGTACTCCCAGACAAATCTGAAACTGCTTC...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS TCA 90 bp AAGTTGACTTTCACATTGACCCAGAAGAAGCTGCCAGTGGAGTTTTaGATCTTGCAGTCAGACTTGTTATTCACAATCGACAAAGGTACA +
Preference number: 5 (lower is better)
Translates to: KLTFTLTQKKLPVEF*ILQSDLLFTIDKGT
Trigger: TGTACCTTTGTCGATTGTGAATAACAAGTCTGACTGCAAGATTCAAAACTCCACTGGCAGCTTCTTCTGGGTCAATGTGAAAGTCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAGTAAAGCGACGGAAGTaGTTAGTTTCGAGGGATCCA +
Preference number: 5 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVVKRRK*LVSRDP
Trigger: TGGATCCCTCGAAACTAACAACTTCCGTCGCTTTAC...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTTCTTTGTTCCCTGCTaGGCAGCAATTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVFFVPC*AAICFS
Trigger: AGAGAAGCAAATTGCTGCCAAGCAGGGAACAAAGAA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGAAATGGTCCTCCCTTaGTTCAGCACCATAAATGTC +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPEMVLP*FSTINV
Trigger: GACATTTATGGTGCTGAACAAAGGGAGGACCATTTC...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTGTTCTTCTGATCAGGTaGAAAGGACTGAATAGCCAC +
Preference number: 5 (lower is better)
Translates to: HDLILKFRREITVEVLLAVLLIR*KGLNSH
Trigger: GTGGCTATTCAGTCCTTTCAACCTGATCAGAAGAAC...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTGTTCTTCTGATCAGGTaGAAAGGACTGAATAGCCAC +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPVLLIR*KGLNSH
Trigger: GTGGCTATTCAGTCCTTTCAACCTGATCAGAAGAAC...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTAAGTTGACTTTCACATaGACCCAGAAGAAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: HDLILKFRREITVEVLLAKLTFT*TQKKLP
Trigger: TGGCAGCTTCTTCTGGGTCAATGTGAAAGTCAACTT...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACTAGATGTCCTCATGTaGACTCTATCACTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLLDVLM*TLSLRP
Trigger: AGGCCTTAGTGATAGAGTCAACATGAGGACATCTAG...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGACCTTCACCCATGATCTGATATaGAAATTCAGAAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: NNIANLCMVLHRGLPWTFTHDLI*KFRREI
Trigger: GATTTCCCTTCTGAATTTCAATATCAGATCATGGGT...GAAGGTCCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTCATTTATTTTTGAGGTaGCCCTTGAAGAGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: HDLILKFRREITVEVLLAHLFLR*PLKSCS
Trigger: GCTGCAACTCTTCAAGGGCAACCTCAAAAATAAATG...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACATTTATTTTTGAGGTaGCCCTTGAAGAGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLHLFLR*PLKSCS
Trigger: GCTGCAACTCTTCAAGGGCAACCTCAAAAATAAATG...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTACCTTGGTTGACACATTTATTTTaGAGGTTGCCCTTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: ILNNIANLCMVLHRGLPWLTHLF*RLPLKS
Trigger: ACTCTTCAAGGGCAACCTCAAAAATAAATGTGTCAA...CCAAGGTAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGGGAACTTCTTCTCCTTaGCTTCAATTTCATCAGTGG +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVGTSSP*LQFHQW
Trigger: CCACTGATGAAATTGAAGCAAAGGAGAAGAAGTTCC...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGGTGCTCCACAGAGGACTACCTTGGACCTTCAGTAATGTTCTTGTTCTATATATCTTGCAGTCAGACTaGTTATTCACAATCGACAAA +
Preference number: 5 (lower is better)
Translates to: MVLHRGLPWTFSNVLVLYILQSD*LFTIDK
Trigger: TTTGTCGATTGTGAATAACAAGTCTGACTGCAAGAT...ATATAGAACAAGAACATTACTGAAGGTCCAAGGTAGTCCTCTGTGGAGCACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTAGGAGAGTGGTTGCTATaGGTTCATAGGATGATTTTG +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLGEWLL*VHRMIL
Trigger: CAAAATCATCCTATGAACCAATAGCAACCACTCTCC...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp TGCAAAATCCTAAATAATATTGCCAATCTCTGTATGGTGCTCCACAGAGGACTATTAGACAAAATCCTCTaGCCAGTATCTTTATCAAGG +
Preference number: 5 (lower is better)
Translates to: CKILNNIANLCMVLHRGLLDKIL*PVSLSR
Trigger: CCTTGATAAAGATACTGGCAAGAGGATTTTGTCTAA...TAGTCCTCTGTGGAGCACCATACAGAGATTGGCAATATTATTTAGGATTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp CATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGCTCTTAGCTTTAGACAAAATCCTCTaGCCAGTATCTTTATCAAGG +
Preference number: 5 (lower is better)
Translates to: HDLILKFRREITVEVLLALDKIL*PVSLSR
Trigger: CCTTGATAAAGATACTGGCAAGAGGATTTTGTCTAA...AGCTAAGAGCACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp AAGAGAACCCATGATCTGATATTGAAATTCAGAAGGGAAATCACAGTGGAAGTGTTGACACATTTATTTTaGAGGTTGCCCTTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: KRTHDLILKFRREITVEVLTHLF*RLPLKS
Trigger: ACTCTTCAAGGGCAACCTCAAAAATAAATGTGTCAA...CACTTCCACTGTGATTTCCCTTCTGAATTTCAATATCAGATCATGGGTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTATCGAAGGCAATGATTTaGAAGACCATTTCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVSKAMI*KTISAV
Trigger: TACTGCTGAAATGGTCTTCAAAATCATTGCCTTCGA...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATTTTAATGGATATCTCAAAGGCTTTTCATGACATAGGCCACAGGTGTTACCCTACCCATGATCTGATATaGAAATTCAGAAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: ILMDISKAFHDIGHRCYPTHDLI*KFRREI
Trigger: GATTTCCCTTCTGAATTTCAATATCAGATCATGGGT...AGGGTAACACCTGTGGCCTATGTCATGAAAAGCCTTTGAGATATCCATTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS-3UTR CAA 90 bp ATGTTCTTGTTCTATATCTTTGGAAGTTCTGGTCCTGAGAAGTTTGTCTCAGTAAAGAACTGGTTGATTTaGCCCAGAATTTTCGTCTTT +
Preference number: 5 (lower is better)
Translates to: MFLFYIFGSSGPEKFVSVKNWLI*PRIFVF
Trigger: AAAGACGAAAATTCTGGGCAAAATCAACCAGTTCTT...TACTGAGACAAACTTCTCAGGACCAGAACTTCCAAAGATATAGAACAAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS GCA 72 bp CCAGGGATGGAGCCAGGTCCTCAGAAGATGTTCCAGTaGCTGGGCTCCTGGGTGTCAGGTGGTCCCCACACC +
Preference number: 6 (lower is better)
Translates to: PGMEPGPQKMFQ*LGSWVSGGPHT
Trigger: GGTGTGGGGACCACCTGACACCCAGGAGCCCAGGCACTGGAACATCTTCTGAGGACCTGGCTCCATCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp CGGTTGGTGTTCATCTTCTCCATGCCTGGAGTCAGGGTTGCTGGGTaGAGGAAGAGGGCTTCTAGGGAGGGGGCCTTGCTGGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: RLVFIFSMPGVRVAG*RKRASREGALLAST
Trigger: GGTGCTGGCCAGCAAGGCCCCCTCCCTAGAAGCCCTCTTCCTCAACCCAGCAACCCTGACTCCAGGCATGGAGAAGATGAACACCAACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp CCAGAGCTCCCCCTGGCAGTGTTGGCAGCAATGTGGTTCTCAGCCTaGGAGCTGGAGAGTGGGAGTTTCACCACCAGCTCAGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: PELPLAVLAAMWFSA*ELESGSFTTSSGSA
Trigger: GGCAGAGCCTGAGCTGGTGGTGAAACTCCCACTCTCCAGCTCCAAGGCTGAGAACCACATTGCTGCCAACACTGCCAGGGGGAGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 72 bp TCTCGGCCAGGGGACCGGAAATGGAACACACTGCCATaGCTAGCCCGGCGTTTTCCAGAGGCGAGGCCTAGA +
Preference number: 6 (lower is better)
Translates to: SRPGDRKWNTLP*LARRFPEARPR
Trigger: TCTAGGCCTCGCCTCTGGAAAACGCCGGGCTAGTCATGGCAGTGTGTTCCATTTCCGGTCCCCTGGCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp CCCCCACCCAGCAGCAGAGAGCCCCGATGGCTTTCGTaGTCTCCAGGAAAGACTCCATCATCTGTGACTCCC +
Preference number: 6 (lower is better)
Translates to: PPPSSREPRWLS*SPGKTPSSVTP
Trigger: GGGAGTCACAGATGATGGAGTCTTTCCTGGAGACCACGAAAGCCATCGGGGCTCTCTGCTGCTGGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp CGAGACATCGACAGCTCCAGGGGCAAGCTCACTAGTGGGCGGCGGTaGGTGTTCATCTTCTCCATGCCTGGAGTCAGGGTTGCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: RDIDSSRGKLTSGRR*VFIFSMPGVRVAGL
Trigger: CAACCCAGCAACCCTGACTCCAGGCATGGAGAAGATGAACACCAACCGCCGCCCACTAGTGAGCTTGCCCCTGGAGCTGTCGATGTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp TGGGGGAATGGGCAGGACCTGCTGAAGAAGCTGCAAAGAGCCTGTTaGGTACGATGGCCAAAGACCTGGATCCGTGCCAGGGCCACCTGC +
Preference number: 6 (lower is better)
Translates to: WGNGQDLLKKLQRAC*VRWPKTWIRARATC
Trigger: GCAGGTGGCCCTGGCACGGATCCAGGTCTTTGGCCATCGTACCAAACAGGCTCTTTGCAGCTTCTTCAGCAGGTCCTGCCCATTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 72 bp CTCCTCAGCTCTGGGCACACATGGGGTGTTAGAGAGTaGCATGGAGCGGTGCAGCACATAGCTCCGATAGGC +
Preference number: 6 (lower is better)
Translates to: LLSSGHTWGVRE*HGAVQHIAPIG
Trigger: GCCTATCGGAGCTATGTGCTGCACCGCTCCATGGCACTCTCTAACACCCCATGTGTGCCCAGAGCTGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp TGCGCACCTGCCAGCCCACATCCCATGGACTCTTGGTaGTATCCAGTTTGCAGCAGGGACAGTGGCGAATGC +
Preference number: 6 (lower is better)
Translates to: CAPASPHPMDSW*YPVCSRDSGEC
Trigger: GCATTCGCCACTGTCCCTGCTGCAAACTGGATACCACCAAGAGTCCATGGGATGTGGGCTGGCAGGTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp CACCCGCATGCCTTCAAATCGAGAAAGAGCCCGCAGTaGCCGCAGAGCGCGAAGGGTTCGAAGGGCTTTGAT +
Preference number: 6 (lower is better)
Translates to: HPHAFKSRKSPQ*PQSAKGSKGFD
Trigger: ATCAAAGCCCTTCGAACCCTTCGCGCTCTGCGGCCACTGCGGGCTCTTTCTCGATTTGAAGGCATGCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp GACAGCTCCAGGGGCAAGCTCACTAGTGGGCGGCGGTaGGTGTTCATCTTCTCCATGCCTGGAGTCAGGGTT +
Preference number: 6 (lower is better)
Translates to: DSSRGKLTSGRR*VFIFSMPGVRV
Trigger: AACCCTGACTCCAGGCATGGAGAAGATGAACACCAACCGCCGCCCACTAGTGAGCTTGCCCCTGGAGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 72 bp TCAGGATTTCCTCAGGATCTAGGCAGTCCACCGTGCTaGCCTCAGAGGAGCTTGTGTCGTCCACTCCCTCAG +
Preference number: 6 (lower is better)
Translates to: SGFPQDLGSPPC*PQRSLCRPLPQ
Trigger: CTGAGGGAGTGGACGACACAAGCTCCTCTGAGGGCAGCACGGTGGACTGCCTAGATCCTGAGGAAATCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 72 bp TCCTCAGGATTTCCTCAGGATCTAGGCAGTCCACCGTaGTGCCCTCAGAGGAGCTTGTGTCGTCCACTCCCT +
Preference number: 6 (lower is better)
Translates to: SSGFPQDLGSPP*CPQRSLCRPLP
Trigger: AGGGAGTGGACGACACAAGCTCCTCTGAGGGCAGCACGGTGGACTGCCTAGATCCTGAGGAAATCCTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp CTGCAAAGAGCCTGTTTGGTACGATGGCCAAAGACCTaGATCCGTGCCAGGGCCACCTGCAGGTTGTTCACC +
Preference number: 6 (lower is better)
Translates to: LQRACLVRWPKT*IRARATCRLFT
Trigger: GGTGAACAACCTGCAGGTGGCCCTGGCACGGATCCAGGTCTTTGGCCATCGTACCAAACAGGCTCTTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp CTGCTGAAGAAGCTGCAAAGAGCCTGTTTGGTACGATaGCCAAAGACCTGGATCCGTGCCAGGGCCACCTGC +
Preference number: 6 (lower is better)
Translates to: LLKKLQRACLVR*PKTWIRARATC
Trigger: GCAGGTGGCCCTGGCACGGATCCAGGTCTTTGGCCATCGTACCAAACAGGCTCTTTGCAGCTTCTTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp CCCTGGCAGTGTTGGCAGCAATGTGGTTCTCAGCCTTaGAGCTGGAGAGTGGGAGTTTCACCACCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: PWQCWQQCGSQP*SWRVGVSPPAQ
Trigger: CTGAGCTGGTGGTGAAACTCCCACTCTCCAGCTCCAAGGCTGAGAACCACATTGCTGCCAACACTGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp TCTTGCGCACCTGCCAGCCCACATCCCATGGACTCTTaGTGGTATCCAGTTTGCAGCAGGGACAGTGGCGAA +
Preference number: 6 (lower is better)
Translates to: SCAPASPHPMDS*WYPVCSRDSGE
Trigger: TTCGCCACTGTCCCTGCTGCAAACTGGATACCACCAAGAGTCCATGGGATGTGGGCTGGCAGGTGCGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp CGCACCTGCCAGCCCACATCCCATGGACTCTTGGTGGTATCCAGTTaGCAGCAGGGACAGTGGCGAATGCATCCTTCTGTGAAGCAGTCA +
Preference number: 6 (lower is better)
Translates to: RTCQPTSHGLLVVSS*QQGQWRMHPSVKQS
Trigger: TGACTGCTTCACAGAAGGATGCATTCGCCACTGTCCCTGCTGCAAACTGGATACCACCAAGAGTCCATGGGATGTGGGCTGGCAGGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 72 bp GGCTTTCGTGGTCTCCAGGAAAGACTCCATCATCTGTaGCTCCCTCAGGGAGTGAGATATCTCGGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GFRGLQERLHHL*LPQGVRYLGQG
Trigger: CCCCTGGCCGAGATATCTCACTCCCTGAGGGAGTCACAGATGATGGAGTCTTTCCTGGAGACCACGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp CAGTGTTGGCAGCAATGTGGTTCTCAGCCTTGGAGCTaGAGAGTGGGAGTTTCACCACCAGCTCAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: QCWQQCGSQPWS*RVGVSPPAQAL
Trigger: CAGAGCCTGAGCTGGTGGTGAAACTCCCACTCTCCAGCTCCAAGGCTGAGAACCACATTGCTGCCAACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp GTAGCAAGTCTTGCGCACCTGCCAGCCCACATCCCATaGACTCTTGGTGGTATCCAGTTTGCAGCAGGGACA +
Preference number: 6 (lower is better)
Translates to: VASLAHLPAHIP*TLGGIQFAAGT
Trigger: TGTCCCTGCTGCAAACTGGATACCACCAAGAGTCCATGGGATGTGGGCTGGCAGGTGCGCAAGACTTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp AGGAACAGACTCATCTTTCCACGTCTCACCCAGGGATaGAGCCAGGTCCTCAGAAGATGTTCCAGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: RNRLIFPRLTQG*SQVLRRCSSAW
Trigger: CCAGGCACTGGAACATCTTCTGAGGACCTGGCTCCATCCCTGGGTGAGACGTGGAAAGATGAGTCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp CAGCCCACATCCCATGGACTCTTGGTGGTATCCAGTTaGCAGCAGGGACAGTGGCGAATGCATCCTTCTGTG +
Preference number: 6 (lower is better)
Translates to: QPTSHGLLVVSS*QQGQWRMHPSV
Trigger: CACAGAAGGATGCATTCGCCACTGTCCCTGCTGCAAACTGGATACCACCAAGAGTCCATGGGATGTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 72 bp GGCCGAGGCTTCTCTTCTTGGTCCTTCTGCTCCCTATaGTTCTCTCTGGCTTTCTTTGTTCCCTGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: GRGFSSWSFCSL*FSLAFFVPCLA
Trigger: TGCCAAGCAGGGAACAAAGAAAGCCAGAGAGAAGCATAGGGAGCAGAAGGACCAAGAAGAGAAGCCTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp GGACTCTTGGTGGTATCCAGTTTGCAGCAGGGACAGTaGCGAATGCATCCTTCTGTGAAGCAGTCATCTGGT +
Preference number: 6 (lower is better)
Translates to: GLLVVSSLQQGQ*RMHPSVKQSSG
Trigger: ACCAGATGACTGCTTCACAGAAGGATGCATTCGCCACTGTCCCTGCTGCAAACTGGATACCACCAAGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp TGGACAGACACTTTGATGGCCGTTCTTCTGATCAGGTaGAAAGGACTGAATAGCCACAGGGCCCGAGTGGCA +
Preference number: 6 (lower is better)
Translates to: WTDTLMAVLLIR*KGLNSHRARVA
Trigger: TGCCACTCGGGCCCTGTGGCTATTCAGTCCTTTCAACCTGATCAGAAGAACGGCCATCAAAGTGTCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp GCAAAGGGATCCGTCACAAGCCCAAAGAGAATTGTCTaGAGCTTCACCCACATGGGGCAGCAATCCCAGATC +
Preference number: 6 (lower is better)
Translates to: AKGSVTSPKRIV*SFTHMGQQSQI
Trigger: GATCTGGGATTGCTGCCCCATGTGGGTGAAGCTCAAGACAATTCTCTTTGGGCTTGTGACGGATCCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp CATTTTTGGAGGTTAAAGGTGATCCATTGTGGGAGTGGAGAGAGGTaGTGTCAATCCCTAGTGCTGCTAGCACCTCCTGCTCCTTCCGGA +
Preference number: 6 (lower is better)
Translates to: HFWRLKVIHCGSGER*CQSLVLLAPPAPSG
Trigger: TCCGGAAGGAGCAGGAGGTGCTAGCAGCACTAGGGATTGACACAACCTCTCTCCACTCCCACAATGGATCACCTTTAACCTCCAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp GTGAGCTCTGCAAAGGGATCCGTCACAAGCCCAAAGAGAATTGTCTaGAGCTTCACCCACATGGGGCAGCAATCCCAGATCAGATACTTC +
Preference number: 6 (lower is better)
Translates to: VSSAKGSVTSPKRIV*SFTHMGQQSQIRYF
Trigger: GAAGTATCTGATCTGGGATTGCTGCCCCATGTGGGTGAAGCTCAAGACAATTCTCTTTGGGCTTGTGACGGATCCCTTTGCAGAGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 72 bp CAAAGGGATCCGTCACAAGCCCAAAGAGAATTGTCTTaGGCTTCACCCACATGGGGCAGCAATCCCAGATCA +
Preference number: 6 (lower is better)
Translates to: QRDPSQAQRELS*ASPTWGSNPRS
Trigger: TGATCTGGGATTGCTGCCCCATGTGGGTGAAGCTCAAGACAATTCTCTTTGGGCTTGTGACGGATCCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 72 bp ATTTGCTGTGAATGCAACAAAACCTTCATCTGGGAGTaGTGCAGCCTCCTCCTCAGCTCTGGGCACACATGG +
Preference number: 6 (lower is better)
Translates to: ICCECNKTFIWE*CSLLLSSGHTW
Trigger: CCATGTGTGCCCAGAGCTGAGGAGGAGGCTGCATCACTCCCAGATGAAGGTTTTGTTGCATTCACAGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 72 bp TATAACCATCAGGGCAGTGGCCTGAGTCAGATCCATTaGCACACAGTAAGGGGTCAGAAGTGCCTCGCTTAT +
Preference number: 6 (lower is better)
Translates to: YNHQGSGLSQIH*HTVRGQKCLAY
Trigger: ATAAGCGAGGCACTTCTGACCCCTTACTGTGTGGCAATGGATCTGACTCAGGCCACTGCCCTGATGGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp AGACCCTGTCAGTGTACTCCAGCAAAGCTTTCACCGTaGGCTTCTGGTCCAGGTAATAGTCTTCAAAGGCCA +
Preference number: 6 (lower is better)
Translates to: RPCQCTPAKLSP*ASGPGNSLQRP
Trigger: TGGCCTTTGAAGACTATTACCTGGACCAGAAGCCCACGGTGAAAGCTTTGCTGGAGTACACTGACAGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp AGGTTAAAGGTGATCCATTGTGGGAGTGGAGAGAGGTaGTGTCAATCCCTAGTGCTGCTAGCACCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: RLKVIHCGSGER*CQSLVLLAPPA
Trigger: AGCAGGAGGTGCTAGCAGCACTAGGGATTGACACAACCTCTCTCCACTCCCACAATGGATCACCTTTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp GGACCAAAGGCAGGTCCATCTGGATCAGTATATTTCGATTGGGTTTaGGGATTCTCAGGGGACCAGAGAGAGTGTCTGCAAAGTCCGAGA +
Preference number: 6 (lower is better)
Translates to: GPKAGPSGSVYFDWV*GFSGDQRECLQSPR
Trigger: TCTCGGACTTTGCAGACACTCTCTCTGGTCCCCTGAGAATCCCAAAACCCAATCGAAATATACTGATCCAGATGGACCTGCCTTTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp TCTCCAGGGACCAAAGGCAGGTCCATCTGGATCAGTATATTTCGATaGGGTTTTGGGATTCTCAGGGGACCAGAGAGAGTGTCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: SPGTKGRSIWISIFR*GFGILRGPERVSAK
Trigger: CTTTGCAGACACTCTCTCTGGTCCCCTGAGAATCCCAAAACCCAATCGAAATATACTGATCCAGATGGACCTGCCTTTGGTCCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 72 bp CCAGGTTCCCTAGCACCATCACCGTCAAGAAAAGGATaGGGCATATGGATTTTTGGCCAACTTCCATGCAGG +
Preference number: 6 (lower is better)
Translates to: PGSLAPSPSRKG*GIWIFGQLPCR
Trigger: CCTGCATGGAAGTTGGCCAAAAATCCATATGCCTCATCCTTTTCTTGACGGTGATGGTGCTAGGGAACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp ATCTCCACCAGTGACTCCGGAGTAAAGCGACGGAAGTaGTTAGTTTCGAGGGATCCAATGGGGAATTCCATC +
Preference number: 6 (lower is better)
Translates to: ISTSDSGVKRRK*LVSRDPMGNSI
Trigger: GATGGAATTCCCCATTGGATCCCTCGAAACTAACAACTTCCGTCGCTTTACTCCGGAGTCACTGGTGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp CTATGCCTTCTCTCACTGGCATTTTTGGAGGTTAAAGGTGATCCATaGTGGGAGTGGAGAGAGGTTGTGTCAATCCCTAGTGCTGCTAGC +
Preference number: 6 (lower is better)
Translates to: LCLLSLAFLEVKGDP*WEWREVVSIPSAAS
Trigger: GCTAGCAGCACTAGGGATTGACACAACCTCTCTCCACTCCCACAATGGATCACCTTTAACCTCCAAAAATGCCAGTGAGAGAAGGCATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 72 bp CACATAGCTCCGATAGGCCTTTTGAATGACAGTGGCTaGAATGTCTTCTTGCTTCCATCGGAGAGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: HIAPIGLLNDSG*NVFLLPSESGC
Trigger: GCAACCACTCTCCGATGGAAGCAAGAAGACATTTCAGCCACTGTCATTCAAAAGGCCTATCGGAGCTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 72 bp TCTCTGGCTTTCTTTGTTCCCTGCTTGGCAGCAATTTaGTTCTCTATCTCCACCAGTGACTCCGGAGTAAAG +
Preference number: 6 (lower is better)
Translates to: SLAFFVPCLAAI*FSISTSDSGVK
Trigger: CTTTACTCCGGAGTCACTGGTGGAGATAGAGAAGCAAATTGCTGCCAAGCAGGGAACAAAGAAAGCCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp TGTAAGGATCAGAGCGGGGTGATTTGTTGTCTTCTGTaGAGCCCTCTGACACTCTTGGCTTTATTCTATGCC +
Preference number: 6 (lower is better)
Translates to: CKDQSGVICCLL*SPLTLLALFYA
Trigger: GGCATAGAATAAAGCCAAGAGTGTCAGAGGGCTCCACAGAAGACAACAAATCACCCCGCTCTGATCCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp CCAAAGGCAGGTCCATCTGGATCAGTATATTTCGATTaGGTTTTGGGATTCTCAGGGGACCAGAGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: PKAGPSGSVYFD*VLGFSGDQREC
Trigger: ACACTCTCTCTGGTCCCCTGAGAATCCCAAAACCCAATCGAAATATACTGATCCAGATGGACCTGCCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp GCAGGTCCATCTGGATCAGTATATTTCGATTGGGTTTaGGGATTCTCAGGGGACCAGAGAGAGTGTCTGCAA +
Preference number: 6 (lower is better)
Translates to: AGPSGSVYFDWV*GFSGDQRECLQ
Trigger: TTGCAGACACTCTCTCTGGTCCCCTGAGAATCCCAAAACCCAATCGAAATATACTGATCCAGATGGACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp TGCTTCTCTATCTCCACCAGTGACTCCGGAGTAAAGCGACGGAAGTaGTTAGTTTCGAGGGATCCAATGGGGAATTCCATCTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: CFSISTSDSGVKRRK*LVSRDPMGNSIFSF
Trigger: GAATGAGAAGATGGAATTCCCCATTGGATCCCTCGAAACTAACAACTTCCGTCGCTTTACTCCGGAGTCACTGGTGGAGATAGAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp CAGAGCGGGGTGATTTGTTGTCTTCTGTGGAGCCCTCTGACACTCTaGGCTTTATTCTATGCCTTCTCTCACTGGCATTTTTGGAGGTTA +
Preference number: 6 (lower is better)
Translates to: QSGVICCLLWSPLTL*ALFYAFSHWHFWRL
Trigger: TAACCTCCAAAAATGCCAGTGAGAGAAGGCATAGAATAAAGCCAAGAGTGTCAGAGGGCTCCACAGAAGACAACAAATCACCCCGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 72 bp AAAGAGTTAACACAGAGCAGAAGGACGCATCATAACTaGACATATCCAGGCTGGAGTGTTCTCACTAGGGCC +
Preference number: 6 (lower is better)
Translates to: KELTQSRRTHHN*TYPGWSVLTRA
Trigger: GGCCCTAGTGAGAACACTCCAGCCTGGATATGTTCAGTTATGATGCGTCCTTCTGCTCTGTGTTAACTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS TCA 72 bp AGGCTAGTGTGTGAAGCAAGAAATGAGAGGCAAGTCTaGGATGCCAAGCTCTGCAAAGACTTGCACTCGTTT +
Preference number: 6 (lower is better)
Translates to: RLVCEARNERQV*DAKLCKDLHSF
Trigger: AAACGAGTGCAAGTCTTTGCAGAGCTTGGCATCTCAGACTTGCCTCTCATTTCTTGCTTCACACACTAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS CCA 72 bp ACGGAGGTTATGATACTGACAACACTCATTGCCCTTTaGGCCCGGAAAGGTTCATCTAAGTATTCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: TEVMILTTLIAL*ARKGSSKYSAD
Trigger: GTCAGCAGAATACTTAGATGAACCTTTCCGGGCCCAAAGGGCAATGAGTGTTGTCAGTATCATAACCTCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp CTCTCACTGGCATTTTTGGAGGTTAAAGGTGATCCATaGTGGGAGTGGAGAGAGGTTGTGTCAATCCCTAGT +
Preference number: 6 (lower is better)
Translates to: LSLAFLEVKGDP*WEWREVVSIPS
Trigger: ACTAGGGATTGACACAACCTCTCTCCACTCCCACAATGGATCACCTTTAACCTCCAAAAATGCCAGTGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp CTTGCTTGTCTTCTACGTAAGAAATATCTTCTCTTCTATCCCAGATaGCCTCTACTGGAGACCACGAGCTCCTGGAACATACGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: LACLLRKKYLLFYPR*PLLETTSSWNIRSA
Trigger: AGCTGAACGTATGTTCCAGGAGCTCGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGAGAAGATATTTCTTACGTAGAAGACAAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS CAA 90 bp TCTGACACTCTTGGCTTTATTCTATGCCTTCTCTCACTGGCATTTTaGGAGGTTAAAGGTGATCCATTGTGGGAGTGGAGAGAGGTTGTG +
Preference number: 6 (lower is better)
Translates to: SDTLGFILCLLSLAF*EVKGDPLWEWREVV
Trigger: CACAACCTCTCTCCACTCCCACAATGGATCACCTTTAACCTCCAAAAATGCCAGTGAGAGAAGGCATAGAATAAAGCCAAGAGTGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 72 bp ACAAAGGTACAAGGGAAAACTCTCCATCGGTATAGTTaGTGCACCTCCAAAACTTCCCTGCGAAGAGGTTCA +
Preference number: 6 (lower is better)
Translates to: TKVQGKTLHRYS*CTSKTSLRRGS
Trigger: TGAACCTCTTCGCAGGGAAGTTTTGGAGGTGCATCAACTATACCGATGGAGAGTTTTCCCTTGTACCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp AGAAATATCTTCTCTTCTATCCCAGATTGCCTCTACTaGAGACCACGAGCTCCTGGAACATACGTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: RNIFSSIPDCLY*RPRAPGTYVQL
Trigger: AAGCTGAACGTATGTTCCAGGAGCTCGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGAGAAGATATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS CCA 72 bp TGGATCTTATCTCCAGGGACCAAAGGCAGGTCCATCTaGATCAGTATATTTCGATTGGGTTTTGGGATTCTC +
Preference number: 6 (lower is better)
Translates to: WILSPGTKGRSI*ISIFRLGFGIL
Trigger: GAGAATCCCAAAACCCAATCGAAATATACTGATCCAGATGGACCTGCCTTTGGTCCCTGGAGATAAGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 72 bp TTCTACGTAAGAAATATCTTCTCTTCTATCCCAGATTaGCTCTACTGGAGACCACGAGCTCCTGGAACATAC +
Preference number: 6 (lower is better)
Translates to: FYVRNIFSSIPD*LYWRPRAPGTY
Trigger: GTATGTTCCAGGAGCTCGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGAGAAGATATTTCTTACGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS GCA 72 bp AGTCAGATCCATTGCCACACAGTAAGGGGTCAGAAGTaGCTCGCTTATTTATGTAGATATCTTGGTCCCTAT +
Preference number: 6 (lower is better)
Translates to: SQIHCHTVRGQK*LAYLCRYLGPY
Trigger: ATAGGGACCAAGATATCTACATAAATAAGCGAGGCACTTCTGACCCCTTACTGTGTGGCAATGGATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655275.1
CDS CAA 72 bp CTTCTACGTAAGAAATATCTTCTCTTCTATCCCAGATaGCCTCTACTGGAGACCACGAGCTCCTGGAACATA +
Preference number: 6 (lower is better)
Translates to: LLRKKYLLFYPR*PLLETTSSWNI
Trigger: TATGTTCCAGGAGCTCGTGGTCTCCAGTAGAGGCAATCTGGGATAGAAGAGAAGATATTTCTTACGTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000655275.1
CDS CAA 72 bp GTGATTTGTTGTCTTCTGTGGAGCCCTCTGACACTCTaGGCTTTATTCTATGCCTTCTCTCACTGGCATTTT +
Preference number: 6 (lower is better)
Translates to: VICCLLWSPLTL*ALFYAFSHWHF
Trigger: AAAATGCCAGTGAGAGAAGGCATAGAATAAAGCCAAGAGTGTCAGAGGGCTCCACAGAAGACAACAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS TCA 72 bp TTCACATTGACCCAGAAGAAGCTGCCAGTGGAGTTTTaGATCTTGCAGTCAGACTTGTTATTCACAATCGAC +
Preference number: 6 (lower is better)
Translates to: FTLTQKKLPVEF*ILQSDLLFTID
Trigger: GTCGATTGTGAATAACAAGTCTGACTGCAAGATTCAAAACTCCACTGGCAGCTTCTTCTGGGTCAATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS GCA 72 bp AGTCAGATCCATTGCCACACAGTAAGGGGTCAGAAGTaGCTCGCTTATTTATGTAGATATCTGGTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: SQIHCHTVRGQK*LAYLCRYLVFC
Trigger: ACAGAAAACCAGATATCTACATAAATAAGCGAGGCACTTCTGACCCCTTACTGTGTGGCAATGGATCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449082.3
ENST00000643924.1
CDS CAA 72 bp GTAATAAATAAACTGAACCACGAGTGGACAGACACTTaGATGGCCGTTCTTCTGATCAGGTTGAAAGGACTG +
Preference number: 6 (lower is better)
Translates to: VINKLNHEWTDT*MAVLLIRLKGL
Trigger: CAGTCCTTTCAACCTGATCAGAAGAACGGCCATCAAAGTGTCTGTCCACTCGTGGTTCAGTTTATTTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp GACGGTGGGAATGATGTGGCAGAAGCAGTTTCAGATTaGTCTGGGAGTACACAATTTTCATTTGCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: DGGNDVAEAVSD*SGSTQFSFAVN
Trigger: ATTCACAGCAAATGAAAATTGTGTACTCCCAGACAAATCTGAAACTGCTTCTGCCACATCATTCCCACCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CCA 72 bp CAGTGGCTGAAATGTCTTCTTGCTTCCATCGGAGAGTaGTTGCTATTGGTTCATAGGATGATTTTGAAAGAT +
Preference number: 6 (lower is better)
Translates to: QWLKCLLASIGE*LLLVHRMILKD
Trigger: ATCTTTCAAAATCATCCTATGAACCAATAGCAACCACTCTCCGATGGAAGCAAGAAGACATTTCAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp TTTCACATTGACCCAGAAGAAGCTGCCAGTGGAGTTTaGAATCTTGCAGTCAGACTTGTTATTCACAATCGA +
Preference number: 6 (lower is better)
Translates to: FHIDPEEAASGV*NLAVRLVIHNR
Trigger: TCGATTGTGAATAACAAGTCTGACTGCAAGATTCAAAACTCCACTGGCAGCTTCTTCTGGGTCAATGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 90 bp AAAGTTGACTTTCACATTGACCCAGAAGAAGCTGCCAGTGGAGTTTaGAATCTTGCAGTCAGACTTGTTATTCACAATCGACAAAGGTAC +
Preference number: 6 (lower is better)
Translates to: KVDFHIDPEEAASGV*NLAVRLVIHNRQRY
Trigger: GTACCTTTGTCGATTGTGAATAACAAGTCTGACTGCAAGATTCAAAACTCCACTGGCAGCTTCTTCTGGGTCAATGTGAAAGTCAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1
CDS CAA 72 bp TCATCTTCATTTTGTATTGAGCTAGATGTCCTCATGTaGACTCTATCACTAAGGCCTCTAGTGACACTCTCA +
Preference number: 6 (lower is better)
Translates to: SSSFCIELDVLM*TLSLRPLVTLS
Trigger: TGAGAGTGTCACTAGAGGCCTTAGTGATAGAGTCAACATGAGGACATCTAGCTCAATACAAAATGAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449082.3
ENST00000643924.1
ENST00000655275.1