Pregenerated sensors for SCML1 (Homo sapiens)
Ensembl gene IDs: ENSG00000047634Ensembl transcript IDs: ENST00000380041.8, ENST00000380043.7, ENST00000380045.7, ENST00000398080.5, ENST00000419185.1, ENST00000427362.2, ENST00000487842.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACACACTAAGAAGGCATaGGTGCCTCTAGAAGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEHTKKA*VPLEVG Trigger: GCCAACTTCTAGAGGCACCAATGCCTTCTTAGTGTG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAACCGGAAACCGGGCCTaGTCACGCGCACGCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDETGNRA*SRARET Trigger: GGTCTCGCGTGCGCGTGACCAGGCCCGGTTTCCGGT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGACTCGGAGTGCGGCTaGGGATCGGGTCCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEDSECG*GSGPPP Trigger: TGGAGGAGGACCCGATCCTCAGCCGCACTCCGAGTC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGATGGGCGACAGCTGTaGCCGTTAGGCCACTCGACG | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEDGRQL*PLGHST Trigger: CGTCGAGTGGCCTAACGGTCACAGCTGTCGCCCATC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGCTTCGGAAAGGTCCTaGCACCGGAAACCGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEASERS*HRKPGL Trigger: CAGGCCCGGTTTCCGGTGCCAGGACCTTTCCGAAGC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGCCCTGACCCCTGAGTaGATCAGAGAGCTCCCGCGA | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEALTPE*IRELPR Trigger: TCGCGGGAGCTCTCTGATCCACTCAGGGGTCAGGGC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATGTCAGCCCGAGGGTTaGCAAGGCAGAGCCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDECQPEG*QGRALK Trigger: CTTCAGGGCTCTGCCTTGGCAACCCTCGGGCTGACA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGTCCTGCCTCTCCGATaGGCGACAGCTGTGACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEVLPLR*ATAVTV Trigger: AACGGTCACAGCTGTCGCCCATCGGAGAGGCAGGAC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAAGACCAGTGATGCCCTaGCCCCTGAGTGGATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDERPVMP*PLSGSE Trigger: CTCTGATCCACTCAGGGGTCAGGGCATCACTGGTCT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGCCAAGGCAGAGCCCTaGAGAAGAACCATACGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEAKAEP*RRTIRC Trigger: GCAACGTATGGTTCTTCTTCAGGGCTCTGCCTTGGC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGAGAAATCTGAGGGATaGACTGGACTCGGAGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEEKSEG*TGLGVR Trigger: CCGCACTCCGAGTCCAGTGCATCCCTCAGATTTCTC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAATGCTCAGAGAAATCTaGGGGATGCACTGGACTCGG | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEMLREI*GMHWTR Trigger: CCGAGTCCAGTGCATCCCTCAGATTTCTCTGAGCAT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATTCCACCGACCAGGTTaGAGGGTGCTTAGTGATGCT | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEFHRPG*RVLSDA Trigger: AGCATCACTAAGCACCCTTCAACCTGGTCGGTGGAA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAAGTAAGTGTTGTGGATaGTGTCAGCCCGAGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDESKCCG*CQPEGC Trigger: GCAACCCTCGGGCTGACAGCATCCACAACACTTACT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAAGCTTCACCCCCAAGTaGTTCAGCAACACGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDESFTPK*FSNTSL Trigger: GAGTGACGTGTTGCTGAAGCACTTGGGGGTGAAGCT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGACCAGGTTGAAGGGTaGTTAGTGATGCTTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEDQVEG*LVMLPS Trigger: GGAAGGAAGCATCACTAAGCACCCTTCAACCTGGTC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGCAAAAGGATGGCCTTaGAAGGTTGCTCGGGGAATT | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEAKGWP*KVARGI Trigger: AATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATTCCATGCAAAAGGATaGCCTTGGAAGGTTGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEFHAKG*PWKVAR Trigger: CCGAGCAACCTTCCAAGGCCATCCTTTTGCATGGAA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAATGGCCTTGGAAGGTTaGTCGGGGAATTATTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEMALEG*SGNYSH Trigger: GTGAGAATAATTCCCCGAGCAACCTTCCAAGGCCAT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAAGAAGCATGGTCAGTTaGGTAAGTGTTGTGGATGCT | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDERSMVS*VSVVDA Trigger: AGCATCCACAACACTTACTCAACTGACCATGCTTCT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGCTGGTATTCTTCCATaGAAAAGGATGGCCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEAGILP*KRMALE Trigger: TTCCAAGGCCATCCTTTTGCATGGAAGAATACCAGC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATTGACACTGGTAAAGTaGGGCTGTAACTTTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDELTLVK*GCNFQG Trigger: ACCCTGAAAGTTACAGCCCCACTTTACCAGTGTCAA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATTCCCGTCAATTTCATaGCTTCTGAAGAGGTCGACA | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEFPSIS*LLKRST Trigger: TGTCGACCTCTTCAGAAGCCATGAAATTGACGGGAA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| 3UTR CAA 72 bp | GAGTTGTCAACCCTGATAATACCTCTCTTAGCTGTTTaGGTTCTCTGTATCGAGATGAACCAGAATCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: ELSTLIIPLLAV*VLCIEMNQNQR Trigger: CCTTTGATTCTGGTTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGACAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATATCCATATCGCTTATaGTTTGTCCACAGGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEYPYRL*FVHRDL Trigger: GAGATCCCTGTGGACAAATCATAAGCGATATGGATA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACGTTGCACCATCAGATaGATAATACGGCTGACAATT | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDERCTIR*IIRLTI Trigger: AATTGTCAGCCGTATTATGCATCTGATGGTGCAACG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACATCCAAACCACCCTTaGGGTACAATATTTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEHPNHP*GTIFLA Trigger: TGCAAGAAATATTGTACCGCAAGGGTGGTTTGGATG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACACAGGGATCTCGCATaGAAACGTTGGATTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEHRDLA*KRWIFE Trigger: TTCAAAAATCCAACGTTTCCATGCGAGATCCCTGTG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGAGAGATGCAAACAATaGAAGTGTAGTTATAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEERCKQ*KCSYRS Trigger: GGACCTATAACTACACTTTCATTGTTTGCATCTCTC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACTCATCCTACCTCTGTaGCAATACAAAATGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDELILPL*QYKMPF Trigger: AAATGGCATTTTGTATTGCCACAGAGGTAGGATGAG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACATTTCACTAATATATaGCTCATCCTACCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEHFTNI*LILPLW Trigger: CCACAGAGGTAGGATGAGCCATATATTAGTGAAATG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATTCAGTATTACAGGATaGGTCAGATACAATATTCGG | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEFSITG*VRYNIR Trigger: CCGAATATTGTATCTGACGCATCCTGTAATACTGAA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR GCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAAGAAGAACCATACGTTaGACCATCAGATGCATAATA | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDERRTIR*TIRCII Trigger: TATTATGCATCTGATGGTGCAACGTATGGTTCTTCT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACTCGCATGGAAACGTTaGATTTTTGAAACCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDELAWKR*IFETFL Trigger: TAGAAAGGTTTCAAAAATCCAACGTTTCCATGCGAG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS-3UTR CCA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATGGCTATTCTCTTTCTaGAAACTTGTAGAATACTGC | + |
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Preference number: 4 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEWLFSF*KLVEYC Trigger: GCAGTATTCTACAAGTTTCCAGAAAGAGAATAGCCA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS CCA 90 bp | GGCCACTCGACGCTTCGGAAAGGTCCTGGCACCGGAAACCGGGCCTaGTCACGCGCACGCGAGACCAGTGATGCCCTGACCCCTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: GHSTLRKGPGTGNRA*SRARETSDALTPEW Trigger: CCACTCAGGGGTCAGGGCATCACTGGTCTCGCGTGCGCGTGACCAGGCCCGGTTTCCGGTGCCAGGACCTTTCCGAAGCGTCGAGTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS TCA 90 bp | CCGGAAACCGGGCCTGGTCACGCGCACGCGAGACCAGTGATGCCCTaGCCCCTGAGTGGATCAGAGAGCTCCCGCGACGCCGAATTCCCA | + |
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Preference number: 5 (lower is better) Translates to: PETGPGHAHARPVMP*PLSGSESSRDAEFP Trigger: TGGGAATTCGGCGTCGCGGGAGCTCTCTGATCCACTCAGGGGTCAGGGCATCACTGGTCTCGCGTGCGCGTGACCAGGCCCGGTTTCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398080.5 |
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| CDS CCA 90 bp | GCCTGGTCACGCGCACGCGAGACCAGTGATGCCCTGACCCCTGAGTaGATCAGAGAGCTCCCGCGACGCCGAATTCCCACACTCGCGGTT | + |
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Preference number: 5 (lower is better) Translates to: AWSRARETSDALTPE*IRELPRRRIPTLAV Trigger: AACCGCGAGTGTGGGAATTCGGCGTCGCGGGAGCTCTCTGATCCACTCAGGGGTCAGGGCATCACTGGTCTCGCGTGCGCGTGACCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398080.5 |
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| CDS CCA 90 bp | CCGGAGGTCGCGGTAAAACTGCTCGCAGTAGTCCTGCCTCTCCGATaGGCGACAGCTGTGACCGTTAGGCCACTCGACGCTTCGGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: PEVAVKLLAVVLPLR*ATAVTVRPLDASER Trigger: CCTTTCCGAAGCGTCGAGTGGCCTAACGGTCACAGCTGTCGCCCATCGGAGAGGCAGGACTACTGCGAGCAGTTTTACCGCGACCTCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000427362.2 |
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| CDS CCA 90 bp | CTCGGAGTGCGGCTGAGGATCGGGTCCTCCTCCAGCTCAGCTCGCTaGTATTCTTCCATGCAAAAGGATGGCCTTGGAAGGTTGCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: LGVRLRIGSSSSSAR*YSSMQKDGLGRLLG Trigger: CCCGAGCAACCTTCCAAGGCCATCCTTTTGCATGGAAGAATACCAGCGAGCTGAGCTGGAGGAGGACCCGATCCTCAGCCGCACTCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
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| CDS TCA 90 bp | TATGCTCAGAGAAATCTGAGGGATGCACTGGACTCGGAGTGCGGCTaGGGATCGGGTCCTCCTCCAGCTCAGCTCGCTGGTATTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: YAQRNLRDALDSECG*GSGPPPAQLAGILP Trigger: TGGAAGAATACCAGCGAGCTGAGCTGGAGGAGGACCCGATCCTCAGCCGCACTCCGAGTCCAGTGCATCCCTCAGATTTCTCTGAGCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
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| CDS GCA 90 bp | AAGGTGGTGCTGCAGAAGCATGGTCAGTTGAGTAAGTGTTGTGGATaGTGTCAGCCCGAGGGTTGCCAAGGCAGAGCCCTGAAGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KVVLQKHGQLSKCCG*CQPEGCQGRALKKN Trigger: GTTCTTCTTCAGGGCTCTGCCTTGGCAACCCTCGGGCTGACAGCATCCACAACACTTACTCAACTGACCATGCTTCTGCAGCACCACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
||
| CDS GCA 90 bp | CATGGTCAGTTGAGTAAGTGTTGTGGATGCTGTCAGCCCGAGGGTTaGCAAGGCAGAGCCCTGAAGAAGAACCATACGTTGCACCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: HGQLSKCCGCCQPEG*QGRALKKNHTLHHQ Trigger: CTGATGGTGCAACGTATGGTTCTTCTTCAGGGCTCTGCCTTGGCAACCCTCGGGCTGACAGCATCCACAACACTTACTCAACTGACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACTGTCAGCCCGAGGGTaGCCAAGGCAGAGCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDELSARG*PRQSPE Trigger: TTCAGGGCTCTGCCTTGGCAACCCTCGGGCTGACAG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS CCA 90 bp | GAAGGTTGCTCGGGGAATTATTCTCACGCCTTGACACTGGTAAAGTaGGGCTGTAACTTTCAGGGTAGGAGAATGTCTCGTAAACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EGCSGNYSHALTLVK*GCNFQGRRMSRKPH Trigger: ATGAGGTTTACGAGACATTCTCCTACCCTGAAAGTTACAGCCCCACTTTACCAGTGTCAAGGCGTGAGAATAATTCCCCGAGCAACCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATGCAAAAGGATGGCCTaGGAAGGTTGCTCGGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDECKRMA*EGCSGN Trigger: ATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGCA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGATGGCCTTGGAAGGTaGCTCGGGGAATTATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEDGLGR*LGELFS Trigger: TGAGAATAATTCCCCGAGCAACCTTCCAAGGCCATC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAAATTATTCTCACGCCTaGACACTGGTAAAGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDENYSHA*TLVKWG Trigger: GCCCCACTTTACCAGTGTCAAGGCGTGAGAATAATT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACAGAAGCATGGTCAGTaGAGTAAGTGTTGTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEQKHGQ*SKCCGC Trigger: GCATCCACAACACTTACTCAACTGACCATGCTTCTG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS GCA 90 bp | AAGGACATCATCAACTGTCTTCAGTTGCTCTTCAGTATTACAGGATaGGTCAGATACAATATTCGGTTCCTGCACATCGATTTCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KDIINCLQLLFSITG*VRYNIRFLHIDFTG Trigger: TCCAGTGAAATCGATGTGCAGGAACCGAATATTGTATCTGACGCATCCTGTAATACTGAAGAGCAACTGAAGACAGTTGATGATGTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380043.7 ENST00000419185.1 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACATATCGCTTATGATTaGTCCACAGGGATCTCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEHIAYD*STGISH Trigger: ATGCGAGATCCCTGTGGACAAATCATAAGCGATATG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACCTCTCTTAGCTGTTTaGGTTCTCTGTATCGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEPLLAV*VLCIEM Trigger: CATCTCGATACAGAGAACCAAAACAGCTAAGAGAGG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAATCATCCAAACCACCCTaGCGGTACAATATTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDESSKPP*RYNISC Trigger: GCAAGAAATATTGTACCGCAAGGGTGGTTTGGATGA...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAATCAACTGTCTTCAGTaGCTCTTCAGTATTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEINCLQ*LFSITG Trigger: TCCTGTAATACTGAAGAGCAACTGAAGACAGTTGAT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAAAGAAGAACCATACGTaGCACCATCAGATGCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEKKNHT*HHQMHN Trigger: ATTATGCATCTGATGGTGCAACGTATGGTTCTTCTT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACCTCTAAAAAGTAAGTaGAGAGGTACTAATGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEPLKSK*RGTNDG Trigger: GCCATCATTAGTACCTCTCAACTTACTTTTTAGAGG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS TCA 90 bp | CTTATGATTTGTCCACAGGGATCTCGCATGGAAACGTTGGATTTTTaGAACCTTTCTACGAATCACATCAATCTTCTTATCCAGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LMICPQGSRMETLDF*NLSTNHINLLIQVL Trigger: CAAAACCTGGATAAGAAGATTGATGTGATTCGTAGAAAGGTTTCAAAAATCCAACGTTTCCATGCGAGATCCCTGTGGACAAATCATAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
||
| CDS TCA 90 bp | TACATGATTTGTCCACAGGGATCTCGCATGGAAACGTTGGATTTTTaGAACCTTTCTACGAATCACATCAATCTTCTTATCCAGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YMICPQGSRMETLDF*NLSTNHINLLIQVL Trigger: CAAAACCTGGATAAGAAGATTGATGTGATTCGTAGAAAGGTTTCAAAAATCCAACGTTTCCATGCGAGATCCCTGTGGACAAATCATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427362.2 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAACTTCTTATCCAGGTTTaGCAGAGCATCATATATAAC | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDELLIQV*QSIIYN Trigger: GTTATATATGATGCTCTGCAAAACCTGGATAAGAAG...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAGGAAACGTTGGATTTTaGAAACCTTTCTACGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDEGNVGF*KPFYES Trigger: TGATTCGTAGAAAGGTTTCAAAAATCCAACGTTTCC...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACCCTGATAATACCTCTCTTAGCTGTTTTGGTTCTCTGTATCGAGATGAAAGAAAAGGTACATTCTaGCATCTGGTGAACATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VNPDNTSLSCFGSLYRDERKGTF*HLVNIF Trigger: GAAAATGTTCACCAGATGCAAGAATGTACCTTTTCT...TTCATCTCGATACAGAGAACCAAAACAGCTAAGAGAGGTATTATCAGGGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS GCA 90 bp | AAGGACATCATCAACTGTCTTCAGTTGCTCTTCAGTATTACAGGATaGGTCAGATACAATATTCGGTTCTTTATTGACAAATTCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KDIINCLQLLFSITG*VRYNIRFFIDKFRF Trigger: AAACCTGAATTTGTCAATAAAGAACCGAATATTGTATCTGACGCATCCTGTAATACTGAAGAGCAACTGAAGACAGTTGATGATGTCCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380041.8 ENST00000427362.2 |
||
| CDS TCA 72 bp | GGGCCTGGTCACGCGCACGCGAGACCAGTGATGCCCTaGCCCCTGAGTGGATCAGAGAGCTCCCGCGACGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPGHAHARPVMP*PLSGSESSRDA Trigger: GGCGTCGCGGGAGCTCTCTGATCCACTCAGGGGTCAGGGCATCACTGGTCTCGCGTGCGCGTGACCAGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS CCA 72 bp | ACGCTTCGGAAAGGTCCTGGCACCGGAAACCGGGCCTaGTCACGCGCACGCGAGACCAGTGATGCCCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: TLRKGPGTGNRA*SRARETSDALT Trigger: GGTCAGGGCATCACTGGTCTCGCGTGCGCGTGACCAGGCCCGGTTTCCGGTGCCAGGACCTTTCCGAAGCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
||
| CDS CCA 72 bp | GTGACCGTTAGGCCACTCGACGCTTCGGAAAGGTCCTaGCACCGGAAACCGGGCCTGGTCACGCGCACGCGA | + |
|
Preference number: 6 (lower is better) Translates to: VTVRPLDASERS*HRKPGLVTRTR Trigger: TCGCGTGCGCGTGACCAGGCCCGGTTTCCGGTGCCAGGACCTTTCCGAAGCGTCGAGTGGCCTAACGGTCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 |
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| CDS CCA 72 bp | CGCGCACGCGAGACCAGTGATGCCCTGACCCCTGAGTaGATCAGAGAGCTCCCGCGACGCCGAATTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RARETSDALTPE*IRELPRRRIPT Trigger: TGTGGGAATTCGGCGTCGCGGGAGCTCTCTGATCCACTCAGGGGTCAGGGCATCACTGGTCTCGCGTGCGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398080.5 |
||
| CDS TCA 72 bp | AGAAATCTGAGGGATGCACTGGACTCGGAGTGCGGCTaGGGATCGGGTCCTCCTCCAGCTCAGCTCGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RNLRDALDSECG*GSGPPPAQLAG Trigger: ACCAGCGAGCTGAGCTGGAGGAGGACCCGATCCTCAGCCGCACTCCGAGTCCAGTGCATCCCTCAGATTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
||
| CDS CCA 72 bp | GCGGTAAAACTGCTCGCAGTAGTCCTGCCTCTCCGATaGGCGACAGCTGTGACCGTTAGGCCACTCGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: AVKLLAVVLPLR*ATAVTVRPLDA Trigger: AGCGTCGAGTGGCCTAACGGTCACAGCTGTCGCCCATCGGAGAGGCAGGACTACTGCGAGCAGTTTTACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000427362.2 |
||
| CDS CCA 72 bp | CGGCTGAGGATCGGGTCCTCCTCCAGCTCAGCTCGCTaGTATTCTTCCATGCAAAAGGATGGCCTTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLRIGSSSSSAR*YSSMQKDGLGR Trigger: CCTTCCAAGGCCATCCTTTTGCATGGAAGAATACCAGCGAGCTGAGCTGGAGGAGGACCCGATCCTCAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
||
| CDS GCA 72 bp | CTGCAGAAGCATGGTCAGTTGAGTAAGTGTTGTGGATaGTGTCAGCCCGAGGGTTGCCAAGGCAGAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQKHGQLSKCCG*CQPEGCQGRAL Trigger: CAGGGCTCTGCCTTGGCAACCCTCGGGCTGACAGCATCCACAACACTTACTCAACTGACCATGCTTCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
||
| CDS GCA 72 bp | GGTCCTCCTCCAGCTCAGCTCGCTGGTATTCTTCCATaGAAAAGGATGGCCTTGGAAGGTTGCTCGGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GPPPAQLAGILP*KRMALEGCSGN Trigger: ATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGCATGGAAGAATACCAGCGAGCTGAGCTGGAGGAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
||
| CDS GCA 72 bp | TTGAGTAAGTGTTGTGGATGCTGTCAGCCCGAGGGTTaGCAAGGCAGAGCCCTGAAGAAGAACCATACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSKCCGCCQPEG*QGRALKKNHTL Trigger: CAACGTATGGTTCTTCTTCAGGGCTCTGCCTTGGCAACCCTCGGGCTGACAGCATCCACAACACTTACTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
||
| CDS CAA 90 bp | CCTCCAGCTCAGCTCGCTGGTATTCTTCCATGCAAAAGGATGGCCTaGGAAGGTTGCTCGGGGAATTATTCTCACGCCTTGACACTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PPAQLAGILPCKRMA*EGCSGNYSHALTLV Trigger: TACCAGTGTCAAGGCGTGAGAATAATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGCATGGAAGAATACCAGCGAGCTGAGCTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
||
| CDS CAA 90 bp | TCAGCTCGCTGGTATTCTTCCATGCAAAAGGATGGCCTTGGAAGGTaGCTCGGGGAATTATTCTCACGCCTTGACACTGGTAAAGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SARWYSSMQKDGLGR*LGELFSRLDTGKVG Trigger: CCCCACTTTACCAGTGTCAAGGCGTGAGAATAATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGCATGGAAGAATACCAGCGAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
||
| CDS CAA 90 bp | CAGCCCGAGGGTTGCCAAGGCAGAGCCCTGAAGAAGAACCATACGTaGCACCATCAGATGCATAATACGGCTGACAATTATGCTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPEGCQGRALKKNHT*HHQMHNTADNYAQR Trigger: TCTCTGAGCATAATTGTCAGCCGTATTATGCATCTGATGGTGCAACGTATGGTTCTTCTTCAGGGCTCTGCCTTGGCAACCCTCGGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
||
| CDS CAA 72 bp | GCCTTGGAAGGTTGCTCGGGGAATTATTCTCACGCCTaGACACTGGTAAAGTGGGGCTGTAACTTTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALEGCSGNYSHA*TLVKWGCNFQG Trigger: ACCCTGAAAGTTACAGCCCCACTTTACCAGTGTCAAGGCGTGAGAATAATTCCCCGAGCAACCTTCCAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
||
| CDS CAA 72 bp | CAGCTCGCTGGTATTCTTCCATGCAAAAGGATGGCCTaGGAAGGTTGCTCGGGGAATTATTCTCACGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QLAGILPCKRMA*EGCSGNYSHAL Trigger: CAAGGCGTGAGAATAATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGCATGGAAGAATACCAGCGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
||
| CDS TCA 72 bp | TGCATAATACGGCTGACAATTATGCTCAGAGAAATCTaGGGGATGCACTGGACTCGGAGTGCGGCTGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CIIRLTIMLREI*GMHWTRSAAED Trigger: ATCCTCAGCCGCACTCCGAGTCCAGTGCATCCCTCAGATTTCTCTGAGCATAATTGTCAGCCGTATTATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
||
| CDS CCA 72 bp | TCGGGGAATTATTCTCACGCCTTGACACTGGTAAAGTaGGGCTGTAACTTTCAGGGTAGGAGAATGTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SGNYSHALTLVK*GCNFQGRRMSR Trigger: ACGAGACATTCTCCTACCCTGAAAGTTACAGCCCCACTTTACCAGTGTCAAGGCGTGAGAATAATTCCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
||
| CDS CAA 72 bp | TGGTATTCTTCCATGCAAAAGGATGGCCTTGGAAGGTaGCTCGGGGAATTATTCTCACGCCTTGACACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: WYSSMQKDGLGR*LGELFSRLDTG Trigger: ACCAGTGTCAAGGCGTGAGAATAATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGCATGGAAGAATACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
||
| CDS CAA 72 bp | GGTTGCCAAGGCAGAGCCCTGAAGAAGAACCATACGTaGCACCATCAGATGCATAATACGGCTGACAATTAT | + |
|
Preference number: 6 (lower is better) Translates to: GCQGRALKKNHT*HHQMHNTADNY Trigger: ATAATTGTCAGCCGTATTATGCATCTGATGGTGCAACGTATGGTTCTTCTTCAGGGCTCTGCCTTGGCAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000487842.1 |
||
| CDS GCA 72 bp | ATCAACTGTCTTCAGTTGCTCTTCAGTATTACAGGATaGGTCAGATACAATATTCGGTTCCTGCACATCGAT | + |
|
Preference number: 6 (lower is better) Translates to: INCLQLLFSITG*VRYNIRFLHID Trigger: ATCGATGTGCAGGAACCGAATATTGTATCTGACGCATCCTGTAATACTGAAGAGCAACTGAAGACAGTTGAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380043.7 ENST00000419185.1 |
||
| CDS CAA 90 bp | CAACAGAGTTTAGTCTCCATCTACTGTTACAAGTATAGACATGCCTaGCTAATCTCACACAGATACTGGTACTCTCTCACTTCTAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QQSLVSIYCYKYRHA*LISHRYWYSLTSSS Trigger: TGAGCTAGAAGTGAGAGAGTACCAGTATCTGTGTGAGATTAGCAAGGCATGTCTATACTTGTAACAGTAGATGGAGACTAAACTCTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427362.2 |
||
| CDS CAA 72 bp | CTGGCAATGAATAAGGACATCATCAACTGTCTTCAGTaGCTCTTCAGTATTACAGGATGCGTCAGATACAAT | + |
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Preference number: 6 (lower is better) Translates to: LAMNKDIINCLQ*LFSITGCVRYN Trigger: ATTGTATCTGACGCATCCTGTAATACTGAAGAGCAACTGAAGACAGTTGATGATGTCCTTATTCATTGCCAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000427362.2 ENST00000487842.1 |
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| CDS CAA 72 bp | TTAGTCTCCATCTACTGTTACAAGTATAGACATGCCTaGCTAATCTCACACAGATACTGGTACTCTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: LVSIYCYKYRHA*LISHRYWYSLT Trigger: AGTGAGAGAGTACCAGTATCTGTGTGAGATTAGCAAGGCATGTCTATACTTGTAACAGTAGATGGAGACTAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427362.2 |
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| CDS CAA 90 bp | GCTTATGATTTGTCCACAGGGATCTCGCATGGAAACGTTGGATTTTaGAAACCTTTCTACGAATCACATCAATCTTCTTATCCAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: AYDLSTGISHGNVGF*KPFYESHQSSYPGF Trigger: AAAACCTGGATAAGAAGATTGATGTGATTCGTAGAAAGGTTTCAAAAATCCAACGTTTCCATGCGAGATCCCTGTGGACAAATCATAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000487842.1 |
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| CDS CAA 90 bp | TCTCTGATGAAAGCAAGCATACAAATTCAGGGGAGAGATATTTTCTaGAGTGTGAGTTTACGGGAACTCCATAGTATACGAGGAATTTAC | + |
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Preference number: 6 (lower is better) Translates to: SLMKASIQIQGRDIF*SVSLRELHSIRGIY Trigger: GTAAATTCCTCGTATACTATGGAGTTCCCGTAAACTCACACTCAAGAAAATATCTCTCCCCTGAATTTGTATGCTTGCTTTCATCAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487842.1 |
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| CDS CAA 72 bp | TTGTCCACAGGGATCTCGCATGGAAACGTTGGATTTTaGAAACCTTTCTACGAATCACATCAATCTTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: LSTGISHGNVGF*KPFYESHQSSY Trigger: ATAAGAAGATTGATGTGATTCGTAGAAAGGTTTCAAAAATCCAACGTTTCCATGCGAGATCCCTGTGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000427362.2 ENST00000487842.1 |
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| CDS CAA 90 bp | ATATATAACCTGGCAATGAATAAGGACATCATCAACTGTCTTCAGTaGCTCTTCAGTATTACAGGATGCGTCAGATACAATATTCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: IYNLAMNKDIINCLQ*LFSITGCVRYNIRF Trigger: GAACCGAATATTGTATCTGACGCATCCTGTAATACTGAAGAGCAACTGAAGACAGTTGATGATGTCCTTATTCATTGCCAGGTTATATAT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000427362.2 ENST00000487842.1 |
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| CDS CAA 90 bp | TTACATGATTTGTCCACAGGGATCTCGCATGGAAACGTTGGATTTTaGAAACCTTTCTACGAATCACATCAATCTTCTTATCCAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LHDLSTGISHGNVGF*KPFYESHQSSYPGF Trigger: AAAACCTGGATAAGAAGATTGATGTGATTCGTAGAAAGGTTTCAAAAATCCAACGTTTCCATGCGAGATCCCTGTGGACAAATCATGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427362.2 |
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| CDS GCA 72 bp | ATCAACTGTCTTCAGTTGCTCTTCAGTATTACAGGATaGGTCAGATACAATATTCGGTTCCTGCTAATATTT | + |
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Preference number: 6 (lower is better) Translates to: INCLQLLFSITG*VRYNIRFLLIF Trigger: AAATATTAGCAGGAACCGAATATTGTATCTGACGCATCCTGTAATACTGAAGAGCAACTGAAGACAGTTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487842.1 |
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| CDS GCA 72 bp | ATCAACTGTCTTCAGTTGCTCTTCAGTATTACAGGATaGGTCAGATACAATATTCGGTTCTTTATTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: INCLQLLFSITG*VRYNIRFFIDK Trigger: TTTGTCAATAAAGAACCGAATATTGTATCTGACGCATCCTGTAATACTGAAGAGCAACTGAAGACAGTTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380041.8 ENST00000427362.2 |
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| CDS CAA 72 bp | CTTTCTACGAATCACATCAATCTTCTTATCCAGGTTTaGCAGAGCATCATATATAACCTGGCAATGAATAAG | + |
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Preference number: 6 (lower is better) Translates to: LSTNHINLLIQV*QSIIYNLAMNK Trigger: CTTATTCATTGCCAGGTTATATATGATGCTCTGCAAAACCTGGATAAGAAGATTGATGTGATTCGTAGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000380041.8 ENST00000380043.7 ENST00000380045.7 ENST00000398080.5 ENST00000419185.1 ENST00000427362.2 ENST00000487842.1 |
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