RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCIMP (Homo sapiens)

Ensembl gene IDs: ENSG00000161929

Ensembl transcript IDs: ENST00000399600.8, ENST00000571800.5, ENST00000574081.6, ENST00000574297.1

Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTaGGCACGAGAGCACTCAGCTGTAACTCACCCACAGCCTCACAGT +
Preference number: 1 (lower is better)
Translates to: GTPCPCKLARCGVGT*AREHSAVTHPQPHS
Trigger: ACTGTGAGGCTGTGGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR GCA 90 bp TCTAGGTGGGGAGGGTTCACGAGAACAAAAGGTACTCCCTGCCCTTaGAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCAC +
Preference number: 1 (lower is better)
Translates to: SRWGGFTRTKGTPCP*KLARCGVGTWAREH
Trigger: GTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTGAACCCTCCCCACCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR GCA 90 bp AGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAAGGTACTCCCTaGCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGA +
Preference number: 1 (lower is better)
Translates to: RVSRWGGFTRTKGTP*PCKLARCGVGTWAR
Trigger: TCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR CCA 90 bp CACGAGAACAAAAGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTaGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTAACTCACCC +
Preference number: 1 (lower is better)
Translates to: HENKRYSLPLQTREM*CGNLGTRALSCNSP
Trigger: GGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR TCA 90 bp ACATCACAGTGGACCTTCTGCCTCCTCCCAGATGCCCAGGGACAGTaGTCTGGAAGGAAGGGGCTTGAGGCTGTTTTCCTAGAACTCGAG +
Preference number: 1 (lower is better)
Translates to: TSQWTFCLLPDAQGQ*SGRKGLEAVFLELE
Trigger: CTCGAGTTCTAGGAAAACAGCCTCAAGCCCCTTCCTTCCAGATCACTGTCCCTGGGCATCTGGGAGGAGGCAGAAGGTCCACTGTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR CCA 90 bp TGGCCTACATCATATAAAGGCACTGGGGTTTGCAGGGTGTCTAGGTaGGGAGGGTTCACGAGAACAAAAGGTACTCCCTGCCCTTGCAAA +
Preference number: 1 (lower is better)
Translates to: WPTSYKGTGVCRVSR*GGFTRTKGTPCPCK
Trigger: TTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTTATATGATGTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR TCA 90 bp CCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCACAACCAAATGCTaGGATTTAATATCACTCAGAACCATGCAAACCAAAGGGAATGAA +
Preference number: 1 (lower is better)
Translates to: PCWGWEPGRVCTTKC*DLISLRTMQTKGNE
Trigger: TTCATTCCCTTTGGTTTGCATGGTTCTGAGTGATATTAAATCTCAGCATTTGGTTGTGCAGACCCTCCCAGGCTCCCATCCCCAGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR TCA 90 bp CTTGAAAATGGGAGGAACACATTTTCCCATCTCTTGAGGGAAATCTaGGTCACTCTCAGGCCTTTCCAGGTTCACAGTGCTCTCTCTGCA +
Preference number: 1 (lower is better)
Translates to: LENGRNTFSHLLREI*VTLRPFQVHSALSA
Trigger: TGCAGAGAGAGCACTGTGAACCTGGAAAGGCCTGAGAGTGACTCAGATTTCCCTCAAGAGATGGGAAAATGTGTTCCTCCCATTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR TCA 90 bp ATGCTGAGATTTAATATCACTCAGAACCATGCAAACCAAAGGGAATaGAGGGGGAAAGAATGCCAAGAAATGAGTAGTTTCCCACAGGTG +
Preference number: 1 (lower is better)
Translates to: MLRFNITQNHANQRE*RGKECQEMSSFPQV
Trigger: CACCTGTGGGAAACTACTCATTTCTTGGCATTCTTTCCCCCTTCATTCCCTTTGGTTTGCATGGTTCTGAGTGATATTAAATCTCAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR TCA 90 bp TCCATTGTTACAGTACAACTTGCAAGCACGGGGAGAAAACCTAGGTaGAAACTCAAATCTCTATGGTCAATTTGGCCTACATCATATAAA +
Preference number: 1 (lower is better)
Translates to: SIVTVQLASTGRKPR*KLKSLWSIWPTSYK
Trigger: TTTATATGATGTAGGCCAAATTGACCATAGAGATTTGAGTTTTCACCTAGGTTTTCTCCCCGTGCTTGCAAGTTGTACTGTAACAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR-3UTR TCA 90 bp TGCAGTGATGCTATCGTGGCTCACTGCAGACCTCCCAGGCTCAAGCGATCCCCCGGTGGGAGAATGGTGTaGACCTGGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: CSDAIVAHCRPPRLKRSPGGRMV*TWEAEL
Trigger: AAGCTCCGCCTCCCAGGTTCACACCATTCTCCCACC...GGGGGATCGCTTGAGCCTGGGAGGTCTGCAGTGAGCCACGATAGCATCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp AGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGCCCATGTGTCTCCTCTaGCTGCAGTCATCCGATCGC +
Preference number: 2 (lower is better)
Translates to: RYSLPLQTREMWCGNLGTPMCLL*LQSSDR
Trigger: GCGATCGGATGACTGCAGCCAGAGGAGACACATGGG...CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR CCA 90 bp CACGAGAACAAAAGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGCACAGGTGGGAGCCATaGAGCCCCGTGGTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: HENKRYSLPLQTREMWCGHRWEP*SPVVLP
Trigger: GGGAAGGACCACGGGGCTCCATGGCTCCCACCTGTG...CCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR GCA 90 bp CTCATTGGCTGCAGCACATCACAGTGGACCTTCTGCCTCCTCCCAGATGCCCAGTGTGTCTCCTCTGGCTaGAGTCATCCGATCGCAGGG +
Preference number: 2 (lower is better)
Translates to: LIGCSTSQWTFCLLPDAQCVSSG*SHPIAG
Trigger: CCCTGCGATCGGATGACTGCAGCCAGAGGAGACACA...CTGGGCATCTGGGAGGAGGCAGAAGGTCCACTGTGATGTGCTGCAGCCAATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR-3UTR CCA 90 bp GGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTAACTCACCCACAGCCTCACAGCCATGGAGCCCCGTaGTCCTTCCCATGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: GVGTWAREHSAVTHPQPHSHGAP*SFPWKV
Trigger: AACTTTCCATGGGAAGGACCACGGGGCTCCATGGCT...GTGAGGCTGTGGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR TCA 90 bp AAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAAGACCAGCATGCTTGGTaGGGGCCTTGCTGGGGATGG +
Preference number: 2 (lower is better)
Translates to: KGTGVCRVSRWGGFTRTKDQHAW*GPCWGW
Trigger: CCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGTC...TTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR GCA 90 bp GACTCCCTGATGCTCTTCCCCAGCTTGAATGCACCAAGGAAAGGCCATTTGTGGCTGGGAGGCGGAGCTTaGAGTGAGTGGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: DSLMLFPSLNAPRKGHLWLGGGA*SEWRSR
Trigger: GCGCGATCTCCACTCACTGCAAGCTCCGCCTCCCAG...CCACAAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCATCAGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp TATAAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACATCGCGAGATGTGGTGTaGGAACCTGGGCACGAGAGC +
Preference number: 2 (lower is better)
Translates to: YKGTGVCRVSRWGGFTRTSRDVV*EPGHES
Trigger: GCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGA...TGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR CCA 90 bp AAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAATGTGGTGTGGGAACCTaGGCACGAGAGCACTCAGCT +
Preference number: 2 (lower is better)
Translates to: KGTGVCRVSRWGGFTRTKCGVGT*AREHSA
Trigger: AGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACA...TTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR TCA 90 bp CAGCACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCACCCATGTGTCTCCTGGCCCAGAGACCTACTaGAGTTCAACCATTCTTGAT +
Preference number: 2 (lower is better)
Translates to: QHKADPSKSSEPSTHVSPGPETY*SSTILD
Trigger: ATCAAGAATGGTTGAACTTCAGTAGGTCTCTGGGCC...AGGAGACACATGGGTGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR GCA 90 bp GGTCTCACTCTGTCGTCCAGGTGCAGTGATGCTATCGTGGCTCACTGCAGACCTAGGATTTTGCCATGTTaGCCAGGCTGTTCTCAGACT +
Preference number: 2 (lower is better)
Translates to: GLTLSSRCSDAIVAHCRPRILPC*PGCSQT
Trigger: AGTCTGAGAACAGCCTGGGCAACATGGCAAAATCCT...AGGTCTGCAGTGAGCCACGATAGCATCACTGCACCTGGACGACAGAGTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp CACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTTTGCCTCAGGAGGCTGAGGTaGGAGAATGGTGTGAACCTG +
Preference number: 2 (lower is better)
Translates to: HPYIRLLGASVLMLPPFCLRRLR*ENGVNL
Trigger: CAGGTTCACACCATTCTCCCACCTCAGCCTCCTGAG...GCAAAAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp GGTCTCACTCTGTCGTCCAGGTGCAGTGATGCTATCGTGGCTCACTGCAGACCTATATGCCACTGTGCCTaGCCTCTGGCTATCTCTTTT +
Preference number: 2 (lower is better)
Translates to: GLTLSSRCSDAIVAHCRPICHCA*PLAISF
Trigger: AAAAGAGATAGCCAGAGGCCAGGCACAGTGGCATAT...AGGTCTGCAGTGAGCCACGATAGCATCACTGCACCTGGACGACAGAGTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp TGCAGTGATGCTATCGTGGCTCACTGCAGACCTCCCAGGCTCAAGCGATCCCCCGGCCTTCCAAAGTGTTaGTATTACAAGCATATGCCA +
Preference number: 2 (lower is better)
Translates to: CSDAIVAHCRPPRLKRSPGLPKC*YYKHMP
Trigger: TGGCATATGCTTGTAATACCAACACTTTGGAAGGCC...GGGGGATCGCTTGAGCCTGGGAGGTCTGCAGTGAGCCACGATAGCATCACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp AAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAACCGTGGTCCTTCCCATaGAAAGTTTCCTCAACAGCA +
Preference number: 2 (lower is better)
Translates to: KGTGVCRVSRWGGFTRTKPWSFP*KVSSTA
Trigger: TGCTGTTGAGGAAACTTTCCATGGGAAGGACCACGG...TTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR CCA 90 bp CTGACTCGGGCCTTGTTGACCCCATTAGGACACTTGTTTAACAAGACATCTGCCCCTGGCCCATCTCATTaGCTGCAGCACATCACAGTG +
Preference number: 2 (lower is better)
Translates to: LTRALLTPLGHLFNKTSAPGPSH*LQHITV
Trigger: CACTGTGATGTGCTGCAGCCAATGAGATGGGCCAGG...GGCAGATGTCTTGTTAAACAAGTGTCCTAATGGGGTCAACAAGGCCCGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR CAA 90 bp GAGCCTATAAAGCTGACTCGGGCCTTGTTGACCCCATTAGGACACTaGTTTAACAAGACATCTGCCCATGTCCCTGGCCCATCTCATTGG +
Preference number: 2 (lower is better)
Translates to: EPIKLTRALLTPLGH*FNKTSAHVPGPSHW
Trigger: CCAATGAGATGGGCCAGGGACATGGGCAGATGTCTTGTTAAACAAGTGTCCTAATGGGGTCAACAAGGCCCGAGTCAGCTTTATAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR-3UTR TCA 90 bp CACGAGAACAAAAGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAAGAATGCCAAGAAATaGGTAGTTTCCCACAGGTGG +
Preference number: 2 (lower is better)
Translates to: HENKRYSLPLQTREMWCGKNAKK*VVSHRW
Trigger: CCACCTGTGGGAAACTACTCATTTCTTGGCATTCTT...CCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR TCA 90 bp GACTCCCTGATGCTCTTCCCCAGCTTGAATGCACCAAGGAAAGGCCATTTGTGGTCCTGGCTAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: DSLMLFPSLNAPRKGHLWSWLTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGA...CCACAAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCATCAGGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR TCA 90 bp CACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTTTGCGAGATTGCAGTGAGCTaGAATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: HPYIRLLGASVLMLPPFCEIAVS*NHATAL
Trigger: GAGTGCAGTGGCATGATTTCAGCTCACTGCAATCTC...GCAAAAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR GCA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCAAAGAAGGCAGCTGTCTaGAAGCCAGGAGGAGAACCC +
Preference number: 2 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPKKAAV*KPGGEP
Trigger: GGGTTCTCCTCCTGGCTTGCAGACAGCTGCCTTCTT...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp CCCACCTTGGCCTCCCAAGGAGGTATTAATAGCAAGGTGGAAGCCTTCATAGAGCCGTGGTCCTTCCCATaGAAAGTTTCCTCAACAGCA +
Preference number: 2 (lower is better)
Translates to: PTLASQGGINSKVEAFIEPWSFP*KVSSTA
Trigger: TGCTGTTGAGGAAACTTTCCATGGGAAGGACCACGG...CTCTATGAAGGCTTCCACCTTGCTATTAATACCTCCTTGGGAGGCCAAGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR-3UTR CCA 90 bp CTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTGTAATCCCAGCACCTTaGGAGGTCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LGFEHEFTPLYQAIGCVGVIPAP*EVEAGG
Trigger: TCCACCCGCCTCGACCTCCCAAGGTGCTGGGATTAC...ACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp CCCACCTTGGCCTCCCAAGGAGGTATTAATAGCAAGGTGGAAGCCTTCATAGAGCAAGTCCTAGGGCTCTaGCGATCAGCTAGAAGGAAT +
Preference number: 2 (lower is better)
Translates to: PTLASQGGINSKVEAFIEQVLGL*RSARRN
Trigger: ATTCCTTCTAGCTGATCGCCAGAGCCCTAGGACTTG...CTCTATGAAGGCTTCCACCTTGCTATTAATACCTCCTTGGGAGGCCAAGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR-3UTR GCA 90 bp GTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTTGGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: VPSWDLNMNLHPYIRLLGWRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCCA...ACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR GCA 90 bp CACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTTTGCCTTCCCCAGCTTGAATaGACCAAGGAAAGGCCATTT +
Preference number: 2 (lower is better)
Translates to: HPYIRLLGASVLMLPPFCLPQLE*TKERPF
Trigger: AAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAG...GCAAAAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR CAA 90 bp GCCTTAACCCCCAGTGAGGCTATATGTGGCCATAGGGATGAGGCCTaGATCCAACAGGATCAGTGTCCTTGTAAGAAGAAACACCAGAAA +
Preference number: 2 (lower is better)
Translates to: ALTPSEAICGHRDEA*IQQDQCPCKKKHQK
Trigger: TTTCTGGTGTTTCTTCTTACAAGGACACTGATCCTGTTGGATCAAGGCCTCATCCCTATGGCCACATATAGCCTCACTGGGGGTTAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR TCA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCAAGTTACTCAGGAGGCTaGGGCAGGAAAATAGCTTGG +
Preference number: 2 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPSYSGG*GRKIAW
Trigger: CCAAGCTATTTTCCTGCCTCAGCCTCCTGAGTAACT...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR TCA 90 bp CTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTCTGTTCTCAGACTCCTaGGCTCAAGTCATCAGCCCG +
Preference number: 2 (lower is better)
Translates to: LGFEHEFTPLYQAIGCVGLFSDS*AQVISP
Trigger: CGGGCTGATGACTTGAGCTCAGGAGTCTGAGAACAG...ACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR TCA 90 bp TTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTAAGTGGAGATTGCAGTaGGCTGAAATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: FTPLYQAIGCVGTYAAPFKWRLQ*AEIMPL
Trigger: CAGTGGCATGATTTCAGCTCACTGCAATCTCCACTT...AAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR TCA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCAGCCTGGTCAATATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPAWSIW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATATTGACCAGGC...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR TCA 90 bp GTCATCCGATCGCAGGGGTGTCTTCATCTAAGGTTTGGGAAGTGCTTTATCTTAGGCCCAGAGACCTACTaGAGTTCAACCATTCTTGAT +
Preference number: 2 (lower is better)
Translates to: VIRSQGCLHLRFGKCFILGPETY*SSTILD
Trigger: ATCAAGAATGGTTGAACTTCAGTAGGTCTCTGGGCC...TAAGATAAAGCACTTCCCAAACCTTAGATGAAGACACCCCTGCGATCGGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR TCA 90 bp AAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAATGCACAACCAAATGCTaGGATTTAATATCACTCAGA +
Preference number: 2 (lower is better)
Translates to: KGTGVCRVSRWGGFTRTKCTTKC*DLISLR
Trigger: TCTGAGTGATATTAAATCTCAGCATTTGGTTGTGCA...TTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR TCA 90 bp CTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTGAAACACCAGAAATCTaGCTCCCTGATGCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: LGFEHEFTPLYQAIGCVGETPEI*LPDALP
Trigger: GGGAAGAGCATCAGGGAGTCAGATTTCTGGTGTTTC...ACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR TCA 90 bp TTGGCCTCCCAAGGAGGTATTAATAGCAAGGTGGAAGCCTTCATAGAGTCTGGACATTTTCCCATCTCTTaGGGGAAATCTGAGTCACTC +
Preference number: 2 (lower is better)
Translates to: LASQGGINSKVEAFIESGHFPIS*GKSESL
Trigger: GAGTGACTCAGATTTCCCTCAAGAGATGGGAAAATG...TCCAGACTCTATGAAGGCTTCCACCTTGCTATTAATACCTCCTTGGGAGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR-3UTR GCA 90 bp TGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTAAGTGAGCTGAAATCATaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: WDLNMNLHPYIRLLGASVSELKS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGATTTCAGCTCACT...TACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR GCA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCACTAGGAAGTGGAGATTaGAGTGAGCTGAAATCATGC +
Preference number: 2 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPLGSGD*SELKSC
Trigger: GCATGATTTCAGCTCACTGCAATCTCCACTTCCTAG...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp TGTTTATGTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTGCTGAGGTGGGAGAATaGTGTGAACCTGGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: CLCSKLGFEHEFTPLYQAAEVGE*CEPGRR
Trigger: CCGCCTCCCAGGTTCACACCATTCTCCCACCTCAGC...AGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAACATAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCACTTATATCAGGCTATTaGGTGCGTCGGTACTTATGC +
Preference number: 2 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPLISGY*VRRYLC
Trigger: GCATAAGTACCGACGCACCCAATAGCCTGATATAAG...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR GCA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCAGTAAAGATAGGATTTTaGCATGTTGCCCAGGCTGTT +
Preference number: 2 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPVKIGF*HVAQAV
Trigger: AACAGCCTGGGCAACATGGCAAAATCCTATCTTTAC...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp CTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTAAGCACCCCAGTCTATaGTATTTTTGTTACAGCAGC +
Preference number: 2 (lower is better)
Translates to: LGFEHEFTPLYQAIGCVGKHPSL*YFCYSS
Trigger: GCTGCTGTAACAAAAATACCATAGACTGGGGTGCTT...ACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp GTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTACTGTGCCTGGCCTCTaGCTATCTCTTTTAAACAGG +
Preference number: 2 (lower is better)
Translates to: VPSWDLNMNLHPYIRLLGTVPGL*LSLLNR
Trigger: CCTGTTTAAAAGAGATAGCCAGAGGCCAGGCACAGT...ACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR-3UTR CCA 90 bp CTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTTGTGCACCATCACGCTaGCTAATTTTTGTAAAGATA +
Preference number: 2 (lower is better)
Translates to: LGFEHEFTPLYQAIGCVGCAPSR*LIFVKI
Trigger: TATCTTTACAAAAATTAGCCAGCGTGATGGTGCACA...ACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR CCA 72 bp GTCTCACTCTGTCGTCCAGGTGCAGTGATGCTATCGTaGCTCACTGCAGACCTCCCAGGCTCAAGCGATCCC +
Preference number: 3 (lower is better)
Translates to: VSLCRPGAVMLS*LTADLPGSSDP
Trigger: GGGATCGCTTGAGCCTGGGAGGTCTGCAGTGAGCCACGATAGCATCACTGCACCTGGACGACAGAGTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR GCA 72 bp GTCCTCAGAGCCGAGCACCCATGTGTCTCCTCTGGCTaGAGTCATCCGATCGCAGGGGTGTCTTCATCTAAG +
Preference number: 3 (lower is better)
Translates to: VLRAEHPCVSSG*SHPIAGVSSSK
Trigger: CTTAGATGAAGACACCCCTGCGATCGGATGACTGCAGCCAGAGGAGACACATGGGTGCTCGGCTCTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR CCA 72 bp CTAAGTCCTCAGAGCCGAGCACCCATGTGTCTCCTCTaGCTGCAGTCATCCGATCGCAGGGGTGTCTTCATC +
Preference number: 3 (lower is better)
Translates to: LSPQSRAPMCLL*LQSSDRRGVFI
Trigger: GATGAAGACACCCCTGCGATCGGATGACTGCAGCCAGAGGAGACACATGGGTGCTCGGCTCTGAGGACTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR CCA 72 bp TGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTaGGCACGAGAGCACTCAGCTGTAACTCACCCACAG +
Preference number: 3 (lower is better)
Translates to: CPCKLARCGVGT*AREHSAVTHPQ
Trigger: CTGTGGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR TCA 72 bp TGGACCTTCTGCCTCCTCCCAGATGCCCAGGGACAGTaGTCTGGAAGGAAGGGGCTTGAGGCTGTTTTCCTA +
Preference number: 3 (lower is better)
Translates to: WTFCLLPDAQGQ*SGRKGLEAVFL
Trigger: TAGGAAAACAGCCTCAAGCCCCTTCCTTCCAGATCACTGTCCCTGGGCATCTGGGAGGAGGCAGAAGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR GCA 72 bp GGAGGGTTCACGAGAACAAAAGGTACTCCCTGCCCTTaGAAACTCGCGAGATGTGGTGTGGGAACCTGGGCA +
Preference number: 3 (lower is better)
Translates to: GGFTRTKGTPCP*KLARCGVGTWA
Trigger: TGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTGAACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR GCA 72 bp AGGTGGGGAGGGTTCACGAGAACAAAAGGTACTCCCTaGCCTTGCAAACTCGCGAGATGTGGTGTGGGAACC +
Preference number: 3 (lower is better)
Translates to: RWGGFTRTKGTP*PCKLARCGVGT
Trigger: GGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTGAACCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR CCA 72 bp AAAAGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTaGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: KRYSLPLQTREM*CGNLGTRALSC
Trigger: ACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR CCA 72 bp GCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTaGGAGGGTCTGCACAACCAAATGCTGAGATTTAAT +
Preference number: 3 (lower is better)
Translates to: ACLVRALLGMGA*EGLHNQMLRFN
Trigger: ATTAAATCTCAGCATTTGGTTGTGCAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR CAA 90 bp GGTCTCACTCTGTCGTCCAGGTGCAGTGATGCTATCGTGGCTCACTGCAGACCTAGGCAGGAAAATAGCTaGGACCTAGGAAGTGGAGAT +
Preference number: 3 (lower is better)
Translates to: GLTLSSRCSDAIVAHCRPRQENS*DLGSGD
Trigger: ATCTCCACTTCCTAGGTCCAAGCTATTTTCCTGCCT...AGGTCTGCAGTGAGCCACGATAGCATCACTGCACCTGGACGACAGAGTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR CCA 72 bp TCATATAAAGGCACTGGGGTTTGCAGGGTGTCTAGGTaGGGAGGGTTCACGAGAACAAAAGGTACTCCCTGC +
Preference number: 3 (lower is better)
Translates to: SYKGTGVCRVSR*GGFTRTKGTPC
Trigger: GCAGGGAGTACCTTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTTATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR CAA 90 bp CTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTTGTAATCCCAGCACCTaGGGAGGTCGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: LGFEHEFTPLYQAIGCVGCNPST*GGRGGW
Trigger: CCACCCGCCTCGACCTCCCAAGGTGCTGGGATTACA...ACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR TCA 72 bp AGATGCCCAGGGACAGTGATCTGGAAGGAAGGGGCTTaGGGCTGTTTTCCTAGAACTCGAGTAAGTACTGAT +
Preference number: 3 (lower is better)
Translates to: RCPGTVIWKEGA*GCFPRTRVSTD
Trigger: ATCAGTACTTACTCGAGTTCTAGGAAAACAGCCTCAAGCCCCTTCCTTCCAGATCACTGTCCCTGGGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR GCA 72 bp TCAATTTGGCCTACATCATATAAAGGCACTGGGGTTTaGAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACA +
Preference number: 3 (lower is better)
Translates to: SIWPTSYKGTGV*RVSRWGGFTRT
Trigger: TGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTTATATGATGTAGGCCAAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR CAA 90 bp TTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTCCAAGGAAAGGCCATTaGTGGGGACATAGCAAGAAG +
Preference number: 3 (lower is better)
Translates to: FTPLYQAIGCVGTYAAPFPRKGH*WGHSKK
Trigger: CTTCTTGCTATGTCCCCACAAATGGCCTTTCCTTGG...AAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR TCA 72 bp CCAGTGAGGCTATATGTGGCCATAGGGATGAGGCCTTaGTCCAACAGGATCAGTGTCCTTGTAAGAAGAAAC +
Preference number: 3 (lower is better)
Translates to: PVRLYVAIGMRP*SNRISVLVRRN
Trigger: GTTTCTTCTTACAAGGACACTGATCCTGTTGGATCAAGGCCTCATCCCTATGGCCACATATAGCCTCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR GCA 72 bp CAGGTTCACAGTGCTCTCTCTGCAAGGCTGTTCATTTaGCAGATTTCCCAGAGGTCACTTAGAAACCAGCAT +
Preference number: 3 (lower is better)
Translates to: QVHSALSARLFI*QISQRSLRNQH
Trigger: ATGCTGGTTTCTAAGTGACCTCTGGGAAATCTGGCAAATGAACAGCCTTGCAGAGAGAGCACTGTGAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR-3UTR CAA 90 bp TGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTAATGCTCTTCCCCAGCTaGAATGCACCAAGGAAAGGC +
Preference number: 3 (lower is better)
Translates to: WDLNMNLHPYIRLLGASVMLFPS*NAPRKG
Trigger: GCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCAT...TACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR TCA 72 bp GGATGGGAGCCTGGGAGGGTCTGCACAACCAAATGCTaGGATTTAATATCACTCAGAACCATGCAAACCAAA +
Preference number: 3 (lower is better)
Translates to: GWEPGRVCTTKC*DLISLRTMQTK
Trigger: TTTGGTTTGCATGGTTCTGAGTGATATTAAATCTCAGCATTTGGTTGTGCAGACCCTCCCAGGCTCCCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR-3UTR CAA 90 bp TTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTGAAAACAAATTTCTGTaGTGTAAGCACCCCAGTCTA +
Preference number: 3 (lower is better)
Translates to: FTPLYQAIGCVGTYAAPFENKFL*CKHPSL
Trigger: TAGACTGGGGTGCTTACACAACAGAAATTTGTTTTC...AAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR TCA 72 bp ACAGTACAACTTGCAAGCACGGGGAGAAAACCTAGGTaGAAACTCAAATCTCTATGGTCAATTTGGCCTACA +
Preference number: 3 (lower is better)
Translates to: TVQLASTGRKPR*KLKSLWSIWPT
Trigger: TGTAGGCCAAATTGACCATAGAGATTTGAGTTTTCACCTAGGTTTTCTCCCCGTGCTTGCAAGTTGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp ACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCACAGTGGCTGGAGTGCTaGAGCTCAGGCACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TSMLGEGLAGDGSLGGSAQWLEC*SSGTAG
Trigger: ACCAGCTGTGCCTGAGCTGCAGCACTCCAGCCACTG...TGCAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp AGACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCTGCCTCCTCCCAGATaGCCAGGGACAGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: RPACLVRALLGMGAWEGLLPPPR*PGTVIW
Trigger: CCAGATCACTGTCCCTGGGCATCTGGGAGGAGGCAG...CAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp AGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGCACAGGTGGGAGCCATaGAGCCCCGTGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RYSLPLQTREMWCGNLGTHRWEP*SPVVLP
Trigger: GGGAAGGACCACGGGGCTCCATGGCTCCCACCTGTG...CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp ACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCACCCATGTGTCTCCTCTaGCTGCAGTCATCCGATCGC +
Preference number: 4 (lower is better)
Translates to: TSMLGEGLAGDGSLGGSAPMCLL*LQSSDR
Trigger: GCGATCGGATGACTGCAGCCAGAGGAGACACATGGG...TGCAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp AGACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCAAACTCGCGAGATGTaGTGTGGGAACCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: RPACLVRALLGMGAWEGLQTREM*CGNLGT
Trigger: CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTG...CAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp AGACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCAGGCTGGAGTGCAATaGCATGTTCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: RPACLVRALLGMGAWEGLQAGVQ*HVLGSP
Trigger: CGGTGAGCCGAGAACATGCCATTGCACTCCAGCCTG...CAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp AGTTTCCCACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTCACAGGTGGGAGCCATaGAGCCCCGTGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SFPQVGAMEPRGPSHGKFHRWEP*SPVVLP
Trigger: GGGAAGGACCACGGGGCTCCATGGCTCCCACCTGTG...AAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGTGGGAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp ACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGGTAGTTTCCCACAGGTaGGAGCCATGGAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: TPCPCKLARCGVGTWAREVVSHR*EPWSPV
Trigger: CACGGGGCTCCATGGCTCCCACCTGTGGGAAACTAC...CTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp AGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGTCGCGAGATGTGGTGTaGGAACCTGGGCACGAGAGC +
Preference number: 4 (lower is better)
Translates to: RYSLPLQTREMWCGNLGTSRDVV*EPGHES
Trigger: GCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGA...CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp AGACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGTGCAGGGTGTCTAGGTaGGGAGGGTTCACGAGAACA +
Preference number: 4 (lower is better)
Translates to: RPACLVRALLGMGAWEGLCRVSR*GGFTRT
Trigger: TGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCA...CAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp TGCAGTGATGCTATCGTGGCTCACTGCAGACCTCCCAGGCTCAAGCGATCCCCCGTAATCCCAGCACCTTaGGAGGTCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSDAIVAHCRPPRLKRSPVIPAP*EVEAGG
Trigger: TCCACCCGCCTCGACCTCCCAAGGTGCTGGGATTAC...GGGGGATCGCTTGAGCCTGGGAGGTCTGCAGTGAGCCACGATAGCATCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR TCA 90 bp AGTTTCCCACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTTATGTAGCGGGCGGCTaGCTTGGGGCTTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SFPQVGAMEPRGPSHGKFYVAGG*LGASCG
Trigger: CCCACAGGAAGCCCCAAGTCAGCCGCCCGCTACATA...AAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGTGGGAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp ACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTCCTCAACAGACCAGCATGCTTGGTaGGGGCCTTGCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: TGGSHGAPWSFPWKVSSTDQHAW*GPCWGW
Trigger: CCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGTC...TGTTGAGGAAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp TGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTAAGCGGGCGGCTGACTTaGGGCTTCCTGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: CKLARCGVGTWAREHSAVSGRLT*GFLWGR
Trigger: TCTTCCCCACAGGAAGCCCCAAGTCAGCCGCCCGCT...TACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp ACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCAAACTCGCGAGATGTaGTGTGGGAACCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: TPCPCKLARCGVGTWAREQTREM*CGNLGT
Trigger: CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTG...CTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp AAAGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACAGTGGCTGGAGTGCTaGAGCTCAGGCACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KGTPCPCKLARCGVGTWAQWLEC*SSGTAG
Trigger: ACCAGCTGTGCCTGAGCTGCAGCACTCCAGCCACTG...TGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp ACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCACCCATGTGTCTCCTCTGGTGTGTCTCCTCTGGCTaGAGTCATCCGATCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRLTPLSPQSRAPMCLLWCVSSG*SHPIAG
Trigger: CCCTGCGATCGGATGACTGCAGCCAGAGGAGACACA...CCAGAGGAGACACATGGGTGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp AGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGCTAAGGAGACAGCAGTaGCTGGAGTGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RYSLPLQTREMWCGNLGTLRRQQ*LECCSS
Trigger: TGAGCTGCAGCACTCCAGCCACTGCTGTCTCCTTAG...CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp GGTCTCACTCTGTCGTCCAGGTGCAGTGATGCTATCGTGGCTCACTGCAGACCTGCTGAGGTGGGAGAATaGTGTGAACCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GLTLSSRCSDAIVAHCRPAEVGE*CEPGRR
Trigger: CCGCCTCCCAGGTTCACACCATTCTCCCACCTCAGC...AGGTCTGCAGTGAGCCACGATAGCATCACTGCACCTGGACGACAGAGTGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp AGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGATCTGCCCATGTCCCTaGCCCATCTCATTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RYSLPLQTREMWCGNLGTICPCP*PISLAA
Trigger: TGCAGCCAATGAGATGGGCCAGGGACATGGGCAGAT...CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp GAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCATATGTAGCGGGCGGCTaGCTTGGGGCTTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ESFLNSTRLTPLSPQSRAYVAGG*LGASCG
Trigger: CCCACAGGAAGCCCCAAGTCAGCCGCCCGCTACATA...TGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp ACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCAGGCCCAGAGACCTACTaGAGTTCAACCATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: TSMLGEGLAGDGSLGGSAGPETY*SSTILD
Trigger: ATCAAGAATGGTTGAACTTCAGTAGGTCTCTGGGCC...TGCAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp TGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTATGTGTCTCCTCTGGCTaGAGTCATCCGATCGCAGGG +
Preference number: 4 (lower is better)
Translates to: CKLARCGVGTWAREHSAVCVSSG*SHPIAG
Trigger: CCCTGCGATCGGATGACTGCAGCCAGAGGAGACACA...TACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp TGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTATCACAGTGGACCTTCTaGCTCCTCCCAGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: CKLARCGVGTWAREHSAVSQWTF*LLPDAQ
Trigger: CTGGGCATCTGGGAGGAGGCAGAAGGTCCACTGTGA...TACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp TGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTAACTCACCCACAGCCTCACTAAGGAGACAGCAGTaGCTGGAGTGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WCGNLGTRALSCNSPTASLRRQQ*LECCSS
Trigger: TGAGCTGCAGCACTCCAGCCACTGCTGTCTCCTTAG...TGAGGCTGTGGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp GAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCAAGCGGGCGGCTGACTTaGGGCTTCCTGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: ESFLNSTRLTPLSPQSRASGRLT*GFLWGR
Trigger: TCTTCCCCACAGGAAGCCCCAAGTCAGCCGCCCGCT...TGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR CAA 72 bp GGGAGGGTTCACGAGAACAAAAGGTACTCCCTGCCCTaGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGC +
Preference number: 4 (lower is better)
Translates to: GRVHENKRYSLP*QTREMWCGNLG
Trigger: GCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTGAACCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp AGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGGGCAGAGGCGGTAATTaGACTGGCGACTCATTAAGA +
Preference number: 4 (lower is better)
Translates to: RYSLPLQTREMWCGNLGTGRGGN*TGDSLR
Trigger: TCTTAATGAGTCGCCAGTTCAATTACCGCCTCTGCC...CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp ACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCAAAGAATGCCAAGAAATaGGTAGTTTCCCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: TSMLGEGLAGDGSLGGSAKNAKK*VVSHRW
Trigger: CCACCTGTGGGAAACTACTCATTTCTTGGCATTCTT...TGCAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp ACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGTGGAAGGAAGGGGCTTaGGGCTGTTTTCCTAGAACT +
Preference number: 4 (lower is better)
Translates to: TPCPCKLARCGVGTWAREWKEGA*GCFPRT
Trigger: AGTTCTAGGAAAACAGCCTCAAGCCCCTTCCTTCCA...CTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp AGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGACAAAAGGTACTCCCTaGCCTTGCAAACTCGCGAGA +
Preference number: 4 (lower is better)
Translates to: RYSLPLQTREMWCGNLGTTKGTP*PCKLAR
Trigger: TCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGT...CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp GGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTAACTCACCCACAGCCTCACACAAAAGGTACTCCCTaGCCTTGCAAACTCGCGAGA +
Preference number: 4 (lower is better)
Translates to: GVGTWAREHSAVTHPQPHTKGTP*PCKLAR
Trigger: TCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGT...GTGAGGCTGTGGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp CAGCACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCACCCATGTGTCTCCTTTGTCCAGGCTGGAGTaGAATGGCATGTTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QHKADPSKSSEPSTHVSPLSRLE*NGMFSA
Trigger: AGCCGAGAACATGCCATTGCACTCCAGCCTGGACAA...AGGAGACACATGGGTGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp AAAGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCAAGCCATGGAGCCCCGTaGTCCTTCCCATGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: KGTPCPCKLARCGVGTWASHGAP*SFPWKV
Trigger: AACTTTCCATGGGAAGGACCACGGGGCTCCATGGCT...TGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp TGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTAGTGATCCGCCCACCTTaGCCTCCCAAGGAGGTATTA +
Preference number: 4 (lower is better)
Translates to: CKLARCGVGTWAREHSAVVIRPP*PPKEVL
Trigger: TAATACCTCCTTGGGAGGCCAAGGTGGGCGGATCAC...TACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp CAGCACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCACCCATGTGTCTCCTGGCAGAGGCGGTAATTaGACTGGCGACTCATTAAGA +
Preference number: 4 (lower is better)
Translates to: QHKADPSKSSEPSTHVSPGRGGN*TGDSLR
Trigger: TCTTAATGAGTCGCCAGTTCAATTACCGCCTCTGCC...AGGAGACACATGGGTGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp CACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTTTGCGGTGGGAGAATGGTGTaGACCTGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: HPYIRLLGASVLMLPPFCGGRMV*TWEAEL
Trigger: AAGCTCCGCCTCCCAGGTTCACACCATTCTCCCACC...GCAAAAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR TCA 90 bp TGCAGTGATGCTATCGTGGCTCACTGCAGACCTCCCAGGCTCAAGCGATCCCCCAAGTGGAGATTGCAGTaGGCTGAAATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: CSDAIVAHCRPPRLKRSPKWRLQ*AEIMPL
Trigger: CAGTGGCATGATTTCAGCTCACTGCAATCTCCACTT...GGGGGATCGCTTGAGCCTGGGAGGTCTGCAGTGAGCCACGATAGCATCACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp TGCAGTGATGCTATCGTGGCTCACTGCAGACCTCCCAGGCTCAAGCGATCCCCCCTTCCCCAGCTTGAATaGACCAAGGAAAGGCCATTT +
Preference number: 4 (lower is better)
Translates to: CSDAIVAHCRPPRLKRSPLPQLE*TKERPF
Trigger: AAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAG...GGGGGATCGCTTGAGCCTGGGAGGTCTGCAGTGAGCCACGATAGCATCACTGCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp GTGGGAACCTGGGCACGAGAGCACTCAGCTGTAACTCACCCACAGCCTCACAGTCCGTGGTCCTTCCCATaGAAAGTTTCCTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: VGTWAREHSAVTHPQPHSPWSFP*KVSSTA
Trigger: TGCTGTTGAGGAAACTTTCCATGGGAAGGACCACGG...ACTGTGAGGCTGTGGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp TATAAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACATGTGGTGTGGGAACCTaGGCACGAGAGCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: YKGTGVCRVSRWGGFTRTCGVGT*AREHSA
Trigger: AGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACA...TGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp GACTCCCTGATGCTCTTCCCCAGCTTGAATGCACCAAGGAAAGGCCATTTGTGGGGAGCTTGCAGTGAGTaGAGATCGCGCCACTGCACT +
Preference number: 4 (lower is better)
Translates to: DSLMLFPSLNAPRKGHLWGACSE*RSRHCT
Trigger: AGTGCAGTGGCGCGATCTCCACTCACTGCAAGCTCC...CCACAAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCATCAGGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp GAATGCCAAGAAATGAGTAGTTTCCCACAGGTGGGAGCCATGGAGCCCCGTGGTCCTGGCCCATCTCATTaGCTGCAGCACATCACAGTG +
Preference number: 4 (lower is better)
Translates to: ECQEMSSFPQVGAMEPRGPGPSH*LQHITV
Trigger: CACTGTGATGTGCTGCAGCCAATGAGATGGGCCAGG...ACCACGGGGCTCCATGGCTCCCACCTGTGGGAAACTACTCATTTCTTGGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR CAA 72 bp ACCAGGGAGGAAGCCCAGGTCCCCAGTGCTCCAGCGTaGATTGAGGGAGAAAGCTTGAAAATGGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: TREEAQVPSAPA*IEGESLKMGGT
Trigger: TGTTCCTCCCATTTTCAAGCTTTCTCCCTCAATCAACGCTGGAGCACTGGGGACCTGGGCTTCCTCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp GGTCTCACTCTGTCGTCCAGGTGCAGTGATGCTATCGTGGCTCACTGCAGACCTAGTTACTCAGGAGGCTaGGGCAGGAAAATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GLTLSSRCSDAIVAHCRPSYSGG*GRKIAW
Trigger: CCAAGCTATTTTCCTGCCTCAGCCTCCTGAGTAACT...AGGTCTGCAGTGAGCCACGATAGCATCACTGCACCTGGACGACAGAGTGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR TCA 90 bp CCCACCTTGGCCTCCCAAGGAGGTATTAATAGCAAGGTGGAAGCCTTCATAGAGGATGCCCAGGGACAGTaGTCTGGAAGGAAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PTLASQGGINSKVEAFIEDAQGQ*SGRKGL
Trigger: AAGCCCCTTCCTTCCAGATCACTGTCCCTGGGCATC...CTCTATGAAGGCTTCCACCTTGCTATTAATACCTCCTTGGGAGGCCAAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp GAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCAAAAGGCACTGGGGTTTaGAGGGTGTCTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ESFLNSTRLTPLSPQSRAKGTGV*RVSRWG
Trigger: TCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT...TGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCACTGGGAGGCGGAGCTTaGAGTGAGTGGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPLGGGA*SEWRSR
Trigger: GCGCGATCTCCACTCACTGCAAGCTCCGCCTCCCAG...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp TGCAGTGATGCTATCGTGGCTCACTGCAGACCTCCCAGGCTCAAGCGATCCCCCCTAGGAAGTGGAGATTaGAGTGAGCTGAAATCATGC +
Preference number: 4 (lower is better)
Translates to: CSDAIVAHCRPPRLKRSPLGSGD*SELKSC
Trigger: GCATGATTTCAGCTCACTGCAATCTCCACTTCCTAG...GGGGGATCGCTTGAGCCTGGGAGGTCTGCAGTGAGCCACGATAGCATCACTGCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp CATATAAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAAGCCCATCTCATTGGCTaGAGCACATCACAGTGGACC +
Preference number: 4 (lower is better)
Translates to: HIKALGFAGCLGGEGSREAHLIG*STSQWT
Trigger: GGTCCACTGTGATGTGCTGCAGCCAATGAGATGGGC...TTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTTATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp AAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAATGCAGGGTGTCTAGGTaGGGAGGGTTCACGAGAACA +
Preference number: 4 (lower is better)
Translates to: KGTGVCRVSRWGGFTRTKCRVSR*GGFTRT
Trigger: TGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCA...TTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp GACTCCCTGATGCTCTTCCCCAGCTTGAATGCACCAAGGAAAGGCCATTTGTGGCTCAGGAGGCTGAGGTaGGAGAATGGTGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: DSLMLFPSLNAPRKGHLWLRRLR*ENGVNL
Trigger: CAGGTTCACACCATTCTCCCACCTCAGCCTCCTGAG...CCACAAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCATCAGGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp TGCAGTGATGCTATCGTGGCTCACTGCAGACCTCCCAGGCTCAAGCGATCCCCCCTTATATCAGGCTATTaGGTGCGTCGGTACTTATGC +
Preference number: 4 (lower is better)
Translates to: CSDAIVAHCRPPRLKRSPLISGY*VRRYLC
Trigger: GCATAAGTACCGACGCACCCAATAGCCTGATATAAG...GGGGGATCGCTTGAGCCTGGGAGGTCTGCAGTGAGCCACGATAGCATCACTGCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp TGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTACAAGTCCTAGGGCTCTaGCGATCAGCTAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: CKLARCGVGTWAREHSAVQVLGL*RSARRN
Trigger: ATTCCTTCTAGCTGATCGCCAGAGCCCTAGGACTTG...TACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp AGTTTCCCACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTGAAGAGTCCTCTCTTTaGCTGGTGGGATACCAGAGT +
Preference number: 4 (lower is better)
Translates to: SFPQVGAMEPRGPSHGKFEESSL*LVGYQS
Trigger: ACTCTGGTATCCCACCAGCCAAAGAGAGGACTCTTC...AAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGTGGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp AAAGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCAGGCCCAGAGACCTACTaGAGTTCAACCATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: KGTPCPCKLARCGVGTWAGPETY*SSTILD
Trigger: ATCAAGAATGGTTGAACTTCAGTAGGTCTCTGGGCC...TGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp CTCATTGGCTGCAGCACATCACAGTGGACCTTCTGCCTCCTCCCAGATGCCCAGCATTTTCCCATCTCTTaGGGGAAATCTGAGTCACTC +
Preference number: 4 (lower is better)
Translates to: LIGCSTSQWTFCLLPDAQHFPIS*GKSESL
Trigger: GAGTGACTCAGATTTCCCTCAAGAGATGGGAAAATG...CTGGGCATCTGGGAGGAGGCAGAAGGTCCACTGTGATGTGCTGCAGCCAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp AGTATAGTTAGAATGAGTCAAGTCCTAGGGCTCTGGCGATCAGCTAGAAGGAATACTCCCGACCTCAGGTaGTCCGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SIVRMSQVLGLWRSARRNTPDLR*SAHLGL
Trigger: GAGGCCAAGGTGGGCGGATCACCTGAGGTCGGGAGT...ATTCCTTCTAGCTGATCGCCAGAGCCCTAGGACTTGACTCATTCTAACTATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp CGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTAACTCACCCAGGCATGCGCGACCATaGCTGACTAATTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: REMWCGNLGTRALSCNSPRHARP*LTNFVF
Trigger: AAATACAAAATTAGTCAGGCATGGTCGCGCATGCCT...GGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp CTTCCCATGGAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGAGCCATGGAGCCCCGTaGTCCTTCCCATGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LPMESFLNSTRLTPLSPQSHGAP*SFPWKV
Trigger: AACTTTCCATGGGAAGGACCACGGGGCTCCATGGCT...CTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTCCATGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp CTGACTCGGGCCTTGTTGACCCCATTAGGACACTTGTTTAACAAGACATCTGCCTGTGGTGTGGGAACCTaGGCACGAGAGCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LTRALLTPLGHLFNKTSACGVGT*AREHSA
Trigger: AGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACA...GGCAGATGTCTTGTTAAACAAGTGTCCTAATGGGGTCAACAAGGCCCGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp TTGGCCTCCCAAGGAGGTATTAATAGCAAGGTGGAAGCCTTCATAGAGTCTGGATCGCGAGATGTGGTGTaGGAACCTGGGCACGAGAGC +
Preference number: 4 (lower is better)
Translates to: LASQGGINSKVEAFIESGSRDVV*EPGHES
Trigger: GCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGA...TCCAGACTCTATGAAGGCTTCCACCTTGCTATTAATACCTCCTTGGGAGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp ACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTCCTCAACAAGCCTTCATAGAGTCTaGAAAGAGAGAACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TGGSHGAPWSFPWKVSSTSLHRV*KERTRE
Trigger: CTCCCTGGTTCTCTCTTTCCAGACTCTATGAAGGCT...TGTTGAGGAAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR CAA 72 bp AAGCTGACTCGGGCCTTGTTGACCCCATTAGGACACTaGTTTAACAAGACATCTGCCCATGTCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KLTRALLTPLGH*FNKTSAHVPGP
Trigger: TGGGCCAGGGACATGGGCAGATGTCTTGTTAAACAAGTGTCCTAATGGGGTCAACAAGGCCCGAGTCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp ACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTCCTCAACATGTTACAGTACAACTTaGAAGCACGGGGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: TGGSHGAPWSFPWKVSSTCYSTT*KHGEKT
Trigger: GGTTTTCTCCCCGTGCTTGCAAGTTGTACTGTAACA...TGTTGAGGAAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp AGACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCAATGTAGCTTGGGATaGAAACAGTCTTCTTATTTT +
Preference number: 4 (lower is better)
Translates to: RPACLVRALLGMGAWEGLQCSLG*KQSSYF
Trigger: AAAATAAGAAGACTGTTTCCATCCCAAGCTACATTG...CAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp GGTCTAAGAGCCTATAAAGCTGACTCGGGCCTTGTTGACCCCATTAGGACACTTTGCAGCACATCACAGTaGACCTTCTGCCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GLRAYKADSGLVDPIRTLCSTSQ*TFCLLP
Trigger: TGGGAGGAGGCAGAAGGTCCACTGTGATGTGCTGCA...AAGTGTCCTAATGGGGTCAACAAGGCCCGAGTCAGCTTTATAGGCTCTTAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp AAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAAAACTTTATTTACCAGTaGGTATGTAGCGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KGTGVCRVSRWGGFTRTKNFIYQ*VCSGRL
Trigger: CAGCCGCCCGCTACATACTCACTGGTAAATAAAGTT...TTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp CATATAAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAAAACTTTATTTACCAGTaGGTATGTAGCGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: HIKALGFAGCLGGEGSRENFIYQ*VCSGRL
Trigger: CAGCCGCCCGCTACATACTCACTGGTAAATAAAGTT...TTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTTATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp ACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTCCTCAACAGGGAGAAAACCTAGGTaGAAACTCAAATCTCTATGG +
Preference number: 4 (lower is better)
Translates to: TGGSHGAPWSFPWKVSSTGRKPR*KLKSLW
Trigger: CCATAGAGATTTGAGTTTTCACCTAGGTTTTCTCCC...TGTTGAGGAAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp CTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTCAGTGGCTGGAGTGCTaGAGCTCAGGCACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGFEHEFTPLYQAIGCVGQWLEC*SSGTAG
Trigger: ACCAGCTGTGCCTGAGCTGCAGCACTCCAGCCACTG...ACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp CTTCCCATGGAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGCCTCCACCAGCTCATTaGAGTGGAATCCTGAACTGT +
Preference number: 4 (lower is better)
Translates to: LPMESFLNSTRLTPLSPQPPPAH*SGILNC
Trigger: ACAGTTCAGGATTCCACTGCAATGAGCTGGTGGAGG...CTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTCCATGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp TGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTATGGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: WDLNMNLHPYIRLLGASVWRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCCA...TACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp TGGACAGGGGATATTAAGCCCCCTGAACTCTCATCTTGTATATGCCATTGTTACGTAGTTTCCCACAGGTaGGAGCCATGGAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: WTGDIKPPELSSCICHCYVVSHR*EPWSPV
Trigger: CACGGGGCTCCATGGCTCCCACCTGTGGGAAACTAC...GTAACAATGGCATATACAAGATGAGAGTTCAGGGGGCTTAATATCCCCTGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp TCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCGGGCCTTGCTGGGGATaGGAGCCTGGGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SKVWEVLYLIELHKITTGGPCWG*EPGRVC
Trigger: GCAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCC...GCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp GACTCCCTGATGCTCTTCCCCAGCTTGAATGCACCAAGGAAAGGCCATTTGTGGACTGTGCCTGGCCTCTaGCTATCTCTTTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: DSLMLFPSLNAPRKGHLWTVPGL*LSLLNR
Trigger: CCTGTTTAAAAGAGATAGCCAGAGGCCAGGCACAGT...CCACAAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCATCAGGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR TCA 90 bp GGTCTAAGAGCCTATAAAGCTGACTCGGGCCTTGTTGACCCCATTAGGACACTTCTCTTGAGGGAAATCTaGGTCACTCTCAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GLRAYKADSGLVDPIRTLLLREI*VTLRPF
Trigger: GAAAGGCCTGAGAGTGACTCAGATTTCCCTCAAGAG...AAGTGTCCTAATGGGGTCAACAAGGCCCGAGTCAGCTTTATAGGCTCTTAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp GTCATCCGATCGCAGGGGTGTCTTCATCTAAGGTTTGGGAAGTGCTTTATCTTAAAAGGCACTGGGGTTTaGAGGGTGTCTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VIRSQGCLHLRFGKCFILKGTGV*RVSRWG
Trigger: TCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT...TAAGATAAAGCACTTCCCAAACCTTAGATGAAGACACCCCTGCGATCGGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp CTTCCCATGGAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGTTGCCTCGTCTAAGCTaGCACTTACAGACACAGTAC +
Preference number: 4 (lower is better)
Translates to: LPMESFLNSTRLTPLSPQLPRLS*HLQTQY
Trigger: GTACTGTGTCTGTAAGTGGCAGCTTAGACGAGGCAA...CTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTCCATGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp TTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTAGTGAGCTGAAATCATaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FTPLYQAIGCVGTYAAPFSELKS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGATTTCAGCTCACT...AAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp AAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCTTTGGGCCTTGCTGGGGATaGGAGCCTGGGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: KVWEVLYLIELHKITTGFGPCWG*EPGRVC
Trigger: GCAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCC...AAAGCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp CTTCCCATGGAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGTGGCCACAGCTAAGATaGTCCAGAAATTATTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPMESFLNSTRLTPLSPQWPQLR*SRNYSS
Trigger: GGAGGAATAATTTCTGGATCATCTTAGCTGTGGCCA...CTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTCCATGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp AGTTTCCCACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTTGCACAACCAAATGCTaGGATTTAATATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: SFPQVGAMEPRGPSHGKFCTTKC*DLISLR
Trigger: TCTGAGTGATATTAAATCTCAGCATTTGGTTGTGCA...AAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGTGGGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp ACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTCCTCAACATGCACAACCAAATGCTaGGATTTAATATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: TGGSHGAPWSFPWKVSSTCTTKC*DLISLR
Trigger: TCTGAGTGATATTAAATCTCAGCATTTGGTTGTGCA...TGTTGAGGAAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp TCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCGACCAGCATGCTTGGTaGGGGCCTTGCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SKVWEVLYLIELHKITTGDQHAW*GPCWGW
Trigger: CCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGTC...GCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR TCA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCAGAGATTGCAGTGAGCTaGAATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPEIAVS*NHATAL
Trigger: GAGTGCAGTGGCATGATTTCAGCTCACTGCAATCTC...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR TCA 90 bp GAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCAACGAAAGCATGTGTTTaGAACACTCCAATCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ESFLNSTRLTPLSPQSRATKACV*NTPILW
Trigger: CCAAAGGATTGGAGTGTTTCAAACACATGCTTTCGT...TGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp GACTCCCTGATGCTCTTCCCCAGCTTGAATGCACCAAGGAAAGGCCATTTGTGGAAGCACCCCAGTCTATaGTATTTTTGTTACAGCAGC +
Preference number: 4 (lower is better)
Translates to: DSLMLFPSLNAPRKGHLWKHPSL*YFCYSS
Trigger: GCTGCTGTAACAAAAATACCATAGACTGGGGTGCTT...CCACAAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCATCAGGGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR CAA 72 bp CCCAGTGAGGCTATATGTGGCCATAGGGATGAGGCCTaGATCCAACAGGATCAGTGTCCTTGTAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: PSEAICGHRDEA*IQQDQCPCKKK
Trigger: TTTCTTCTTACAAGGACACTGATCCTGTTGGATCAAGGCCTCATCCCTATGGCCACATATAGCCTCACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR TCA 90 bp CTTCCCATGGAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGTGGAATCCTGAACTGTaGAAGTATCCATATGTGAGC +
Preference number: 4 (lower is better)
Translates to: LPMESFLNSTRLTPLSPQWNPEL*KYPYVS
Trigger: GCTCACATATGGATACTTTCACAGTTCAGGATTCCA...CTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTCCATGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCAAGGATTTTGCCATGTTaGCCAGGCTGTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPRILPC*PGCSQT
Trigger: AGTCTGAGAACAGCCTGGGCAACATGGCAAAATCCT...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp CACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTTTGCGTAAAGATAGGATTTTaGCATGTTGCCCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: HPYIRLLGASVLMLPPFCVKIGF*HVAQAV
Trigger: AACAGCCTGGGCAACATGGCAAAATCCTATCTTTAC...GCAAAAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp TTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTGTGCGTCGGTACTTATaGTGCCCCCTTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FTPLYQAIGCVGTYAAPFVRRYL*CPLFAF
Trigger: AAAAGCAAAAAGGGGGCAGCATAAGTACCGACGCAC...AAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp TTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTATATGCCACTGTGCCTaGCCTCTGGCTATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: FTPLYQAIGCVGTYAAPFICHCA*PLAISF
Trigger: AAAAGAGATAGCCAGAGGCCAGGCACAGTGGCATAT...AAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp AGTTTCCCACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTAAACTCAAATCTCTATaGTCAATTTGGCCTACATCA +
Preference number: 4 (lower is better)
Translates to: SFPQVGAMEPRGPSHGKFKLKSL*SIWPTS
Trigger: TGATGTAGGCCAAATTGACCATAGAGATTTGAGTTT...AAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGTGGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp TTGGCCTCCCAAGGAGGTATTAATAGCAAGGTGGAAGCCTTCATAGAGTCTGGAAAGAATGCCAAGAAATaGGTAGTTTCCCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LASQGGINSKVEAFIESGKNAKK*VVSHRW
Trigger: CCACCTGTGGGAAACTACTCATTTCTTGGCATTCTT...TCCAGACTCTATGAAGGCTTCCACCTTGCTATTAATACCTCCTTGGGAGGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp GTCATCCGATCGCAGGGGTGTCTTCATCTAAGGTTTGGGAAGTGCTTTATCTTAGCAAGGCTGTTCATTTaGCAGATTTCCCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VIRSQGCLHLRFGKCFILARLFI*QISQRS
Trigger: TGACCTCTGGGAAATCTGGCAAATGAACAGCCTTGC...TAAGATAAAGCACTTCCCAAACCTTAGATGAAGACACCCCTGCGATCGGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp GTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTCTAAGGAGACAGCAGTaGCTGGAGTGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VPSWDLNMNLHPYIRLLGLRRQQ*LECCSS
Trigger: TGAGCTGCAGCACTCCAGCCACTGCTGTCTCCTTAG...ACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp TCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCCCCATGTGTCTCCTCTaGCTGCAGTCATCCGATCGC +
Preference number: 4 (lower is better)
Translates to: SKVWEVLYLIELHKITTGPMCLL*LQSSDR
Trigger: GCGATCGGATGACTGCAGCCAGAGGAGACACATGGG...GCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp CACGAGAACAAAAGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGTTTTGTTCTATAATTTaGGAAGAGTCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: HENKRYSLPLQTREMWCGFCSII*EESSLW
Trigger: CCAAAGAGAGGACTCTTCCCAAATTATAGAACAAAA...CCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp TGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTAGGCAGAGGCGGTAATTaGACTGGCGACTCATTAAGA +
Preference number: 4 (lower is better)
Translates to: WDLNMNLHPYIRLLGASVGRGGN*TGDSLR
Trigger: TCTTAATGAGTCGCCAGTTCAATTACCGCCTCTGCC...TACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR TCA 90 bp TGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTACTGACATCTGAAGGATaGGGAAAATCCAGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: WDLNMNLHPYIRLLGASVLTSEG*GKSSEA
Trigger: TGCCTCGCTGGATTTTCCTCATCCTTCAGATGTCAG...TACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp TCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCGGTACTCCCTGCCCTTaGAAACTCGCGAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: SKVWEVLYLIELHKITTGGTPCP*KLARCG
Trigger: ACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACC...GCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR GCA 90 bp AAACTCAAATCTCTATGGTCAATTTGGCCTACATCATATAAAGGCACTGGGGTTGGTACTCCCTGCCCTTaGAAACTCGCGAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: KLKSLWSIWPTSYKGTGVGTPCP*KLARCG
Trigger: ACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACC...AACCCCAGTGCCTTTATATGATGTAGGCCAAATTGACCATAGAGATTTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp CACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTTTGCTGTGCACCATCACGCTaGCTAATTTTTGTAAAGATA +
Preference number: 4 (lower is better)
Translates to: HPYIRLLGASVLMLPPFCCAPSR*LIFVKI
Trigger: TATCTTTACAAAAATTAGCCAGCGTGATGGTGCACA...GCAAAAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR TCA 90 bp TGGACAGGGGATATTAAGCCCCCTGAACTCTCATCTTGTATATGCCATTGTTACTGCTCCAGCGTTGATTaGGGGAGAAAGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: WTGDIKPPELSSCICHCYCSSVD*GRKLEN
Trigger: ATTTTCAAGCTTTCTCCCTCAATCAACGCTGGAGCA...GTAACAATGGCATATACAAGATGAGAGTTCAGGGGGCTTAATATCCCCTGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR GCA 90 bp GTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTCCTCCACCAGCTCATTaGAGTGGAATCCTGAACTGT +
Preference number: 4 (lower is better)
Translates to: VPSWDLNMNLHPYIRLLGPPPAH*SGILNC
Trigger: ACAGTTCAGGATTCCACTGCAATGAGCTGGTGGAGG...ACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp TGTTTATGTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTAAGAAGGCAGCTGTCTaGAAGCCAGGAGGAGAACCC +
Preference number: 4 (lower is better)
Translates to: CLCSKLGFEHEFTPLYQAKKAAV*KPGGEP
Trigger: GGGTTCTCCTCCTGGCTTGCAGACAGCTGCCTTCTT...AGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAACATAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp GTCATCCGATCGCAGGGGTGTCTTCATCTAAGGTTTGGGAAGTGCTTTATCTTACCCCAACACACCTATTaGAAAATGATGCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: VIRSQGCLHLRFGKCFILPQHTY*KMMLLG
Trigger: ACCTAGAAGCATCATTTTGCAATAGGTGTGTTGGGG...TAAGATAAAGCACTTCCCAAACCTTAGATGAAGACACCCCTGCGATCGGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574081.6
3UTR CAA 72 bp GATTTGAACATGAATTTACACCCTTATATCAGGCTATaGGGTGCGTCGGTACTTATGCTGCCCCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: DLNMNLHPYIRL*GASVLMLPPFC
Trigger: GCAAAAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571800.5
3UTR CAA 72 bp GCTTCTAGGTGTAAATCAGAAGGTAACTTTTGTCCTTaGTCCATTGTTACAGTACAACTTGCAAGCACGGGG +
Preference number: 4 (lower is better)
Translates to: ASRCKSEGNFCP*SIVTVQLASTG
Trigger: CCCCGTGCTTGCAAGTTGTACTGTAACAATGGACAAAGGACAAAAGTTACCTTCTGATTTACACCTAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp GTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTTGGCCACAGCTAAGATaGTCCAGAAATTATTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPSWDLNMNLHPYIRLLGWPQLR*SRNYSS
Trigger: GGAGGAATAATTTCTGGATCATCTTAGCTGTGGCCA...ACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp TGTTTATGTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTTATCAGGCTATTGGGTaGGTCGGTACTTATGCTGCC +
Preference number: 4 (lower is better)
Translates to: CLCSKLGFEHEFTPLYQAYQAIG*VGTYAA
Trigger: GGCAGCATAAGTACCGACGCACCCAATAGCCTGATA...AGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAACATAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR GCA 90 bp AGTATAGTTAGAATGAGTCAAGTCCTAGGGCTCTGGCGATCAGCTAGAAGGAATCTCTCATCTTGTATATaGCATTGTTACATGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SIVRMSQVLGLWRSARRNLSSCI*HCYMPL
Trigger: AAGGGGCATGTAACAATGGCATATACAAGATGAGAG...ATTCCTTCTAGCTGATCGCCAGAGCCCTAGGACTTGACTCATTCTAACTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp AAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCTTTCCGTGGTCCTTCCCATaGAAAGTTTCCTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: KVWEVLYLIELHKITTGFPWSFP*KVSSTA
Trigger: TGCTGTTGAGGAAACTTTCCATGGGAAGGACCACGG...AAAGCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR CAA 72 bp TTATTTTTGTTCTATAATTTGGGAAGAGTCCTCTCTTaGGCTGGTGGGATACCAGAGTCCCATAAGGCCATA +
Preference number: 4 (lower is better)
Translates to: LFLFYNLGRVLS*AGGIPESHKAI
Trigger: TATGGCCTTATGGGACTCTGGTATCCCACCAGCCAAAGAGAGGACTCTTCCCAAATTATAGAACAAAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp GTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTTGGAATCCTGAACTGTaGAAGTATCCATATGTGAGC +
Preference number: 4 (lower is better)
Translates to: VPSWDLNMNLHPYIRLLGWNPEL*KYPYVS
Trigger: GCTCACATATGGATACTTTCACAGTTCAGGATTCCA...ACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR TCA 90 bp TCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCTTGAGGGAGAAAGCTTaGAAATGGGAGGAACACATT +
Preference number: 4 (lower is better)
Translates to: SKVWEVLYLIELHKITTGLREKA*KWEEHI
Trigger: AATGTGTTCCTCCCATTTTCAAGCTTTCTCCCTCAA...GCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR TCA 90 bp CTTCTAGGTGTAAATCAGAAGGTAACTTTTGTCCTTTGTCCATTGTTACAGTACTGGAATCCTGAACTGTaGAAGTATCCATATGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLGVNQKVTFVLCPLLQYWNPEL*KYPYVS
Trigger: GCTCACATATGGATACTTTCACAGTTCAGGATTCCA...GTACTGTAACAATGGACAAAGGACAAAAGTTACCTTCTGATTTACACCTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CCA 90 bp TCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCTCTCTATGGTCAATTTaGCCTACATCATATAAAGGC +
Preference number: 4 (lower is better)
Translates to: SKVWEVLYLIELHKITTGSLWSI*PTSYKG
Trigger: GCCTTTATATGATGTAGGCCAAATTGACCATAGAGA...GCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
3UTR CAA 72 bp CCCATGTTTCTTTCTGTTTATGTTCCAAGCTGGGATTaGAACATGAATTTACACCCTTATATCAGGCTATTG +
Preference number: 4 (lower is better)
Translates to: PMFLSVYVPSWD*NMNLHPYIRLL
Trigger: CAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAACATAAACAGAAAGAAACATGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CCA 90 bp TCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCCAATGTAGCTTGGGATaGAAACAGTCTTCTTATTTT +
Preference number: 4 (lower is better)
Translates to: SKVWEVLYLIELHKITTGQCSLG*KQSSYF
Trigger: AAAATAAGAAGACTGTTTCCATCCCAAGCTACATTG...GCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CCA 90 bp TCATCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTTCTCTATGGTCAATTTaGCCTACATCATATAAAGGC +
Preference number: 4 (lower is better)
Translates to: SSKVWEVLYLIELHKITTSLWSI*PTSYKG
Trigger: GCCTTTATATGATGTAGGCCAAATTGACCATAGAGA...AGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp AGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGTGCTTGGTGAGGGCCTaGCTGGGGATGGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: RYSLPLQTREMWCGNLGTCLVRA*LGMGAW
Trigger: CCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCA...CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp ACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGCATCCTCCACCAGCTCATaGCAGTGGAATCCTGAACTG +
Preference number: 5 (lower is better)
Translates to: TSMLGEGLAGDGSLGGSASSTSS*QWNPEL
Trigger: CAGTTCAGGATTCCACTGCAATGAGCTGGTGGAGGA...TGCAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp CAGCACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCACCCATGTGTCTCCTAGGTACTCCCTGCCCTaGCAAACTCGCGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: QHKADPSKSSEPSTHVSPRYSLP*QTREMW
Trigger: CCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT...AGGAGACACATGGGTGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp CGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTAACTCACCCAAGCTGACTCGGGCCTaGTTGACCCCATTAGGACAC +
Preference number: 5 (lower is better)
Translates to: REMWCGNLGTRALSCNSPKLTRA*LTPLGH
Trigger: GTGTCCTAATGGGGTCAACAAGGCCCGAGTCAGCTT...GGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp CGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTAACTCACCCCCCAGTGCTCCAGCGTaGATTGAGGGAGAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: REMWCGNLGTRALSCNSPPSAPA*IEGESL
Trigger: CAAGCTTTCTCCCTCAATCAACGCTGGAGCACTGGG...GGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp ACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGGGAAGAGTCCTCTCTTaGGCTGGTGGGATACCAGAG +
Preference number: 5 (lower is better)
Translates to: TPCPCKLARCGVGTWAREGRVLS*AGGIPE
Trigger: CTCTGGTATCCCACCAGCCAAAGAGAGGACTCTTCC...CTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp GACTCCCTGATGCTCTTCCCCAGCTTGAATGCACCAAGGAAAGGCCATTTGTGGTGTAATCCCAGCACCTaGGGAGGTCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: DSLMLFPSLNAPRKGHLWCNPST*GGRGGW
Trigger: CCACCCGCCTCGACCTCCCAAGGTGCTGGGATTACA...CCACAAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCATCAGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp GTGGGAACCTGGGCACGAGAGCACTCAGCTGTAACTCACCCACAGCCTCACAGTCTGACTCGGGCCTTGTaGACCCCATTAGGACACTTG +
Preference number: 5 (lower is better)
Translates to: VGTWAREHSAVTHPQPHSLTRAL*TPLGHL
Trigger: CAAGTGTCCTAATGGGGTCAACAAGGCCCGAGTCAG...ACTGTGAGGCTGTGGGTGAGTTACAGCTGAGTGCTCTCGTGCCCAGGTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS GCA 90 bp GTATCCATATGTGAGCAGCTAAGGAGACAGCAGTGGCTGGAGTGCTaGAGCTCAGGCACAGCTGGTGAGAGGCATTCCTCACTCACAGGC +
Preference number: 5 (lower is better)
Translates to: VSICEQLRRQQWLEC*SSGTAGERHSSLTG
Trigger: GCCTGTGAGTGAGGAATGCCTCTCACCAGCTGTGCCTGAGCTGCAGCACTCCAGCCACTGCTGTCTCCTTAGCTGCTCACATATGGATAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399600.8
ENST00000574081.6
ENST00000574297.1
CDS-3UTR CAA 90 bp AGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGGCAATTTCCCATTTCTaGCCTCGTCTAAGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: RYSLPLQTREMWCGNLGTAISHF*PRLSCH
Trigger: GTGGCAGCTTAGACGAGGCAAGAAATGGGAAATTGC...CGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp GGTCTCACTCTGTCGTCCAGGTGCAGTGATGCTATCGTGGCTCACTGCAGACCTATGCTCTTCCCCAGCTaGAATGCACCAAGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: GLTLSSRCSDAIVAHCRPMLFPS*NAPRKG
Trigger: GCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCAT...AGGTCTGCAGTGAGCCACGATAGCATCACTGCACCTGGACGACAGAGTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp TGCAGTGATGCTATCGTGGCTCACTGCAGACCTCCCAGGCTCAAGCGATCCCCCAGGCAGGAAAATAGCTaGGACCTAGGAAGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: CSDAIVAHCRPPRLKRSPRQENS*DLGSGD
Trigger: ATCTCCACTTCCTAGGTCCAAGCTATTTTCCTGCCT...GGGGGATCGCTTGAGCCTGGGAGGTCTGCAGTGAGCCACGATAGCATCACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp CACGAGAACAAAAGGTACTCCCTGCCCTTGCAAACTCGCGAGATGTGGTGTGGGTCCTCCACCAGCTCATaGCAGTGGAATCCTGAACTG +
Preference number: 5 (lower is better)
Translates to: HENKRYSLPLQTREMWCGSSTSS*QWNPEL
Trigger: CAGTTCAGGATTCCACTGCAATGAGCTGGTGGAGGA...CCCACACCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCTTTTGTTCTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp ACAGGTGGGAGCCATGGAGCCCCGTGGTCCTTCCCATGGAAAGTTTCCTCAACATGCAAGGCTGTTCATTaGCCAGATTTCCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: TGGSHGAPWSFPWKVSSTCKAVH*PDFPEV
Trigger: GACCTCTGGGAAATCTGGCAAATGAACAGCCTTGCA...TGTTGAGGAAACTTTCCATGGGAAGGACCACGGGGCTCCATGGCTCCCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp ACAAGGCTGACCCCTCTAAGTCCTCAGAGCCGAGCACCCATGTGTCTCCTCTGGTTGTGTTTCAGGGGCTaGGCAATTTCCCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: TRLTPLSPQSRAPMCLLWLCFRG*AISHFL
Trigger: CAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAA...CCAGAGGAGACACATGGGTGCTCGGCTCTGAGGACTTAGAGGGGTCAGCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp AGACCAGCATGCTTGGTGAGGGCCTTGCTGGGGATGGGAGCCTGGGAGGGTCTGTTTGTCCTTTGTCCATaGTTACAGTACAACTTGCAA +
Preference number: 5 (lower is better)
Translates to: RPACLVRALLGMGAWEGLFVLCP*LQYNLQ
Trigger: TTGCAAGTTGTACTGTAACAATGGACAAAGGACAAA...CAGACCCTCCCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCATGCTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp TGCAAACTCGCGAGATGTGGTGTGGGAACCTGGGCACGAGAGCACTCAGCTGTACCTGTTCCCCATGATTaGTCCTGGGGGAAATGTATT +
Preference number: 5 (lower is better)
Translates to: CKLARCGVGTWAREHSAVPVPHD*SWGKCI
Trigger: AATACATTTCCCCCAGGACAAATCATGGGGAACAGG...TACAGCTGAGTGCTCTCGTGCCCAGGTTCCCACACCACATCTCGCGAGTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp ATCTCATTGGCTGCAGCACATCACAGTGGACCTTCTGCCTCCTCCCAGATGCCCTTGTTACAGTACAACTaGCAAGCACGGGGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: ISLAAAHHSGPSASSQMPLLQYN*QARGEN
Trigger: GTTTTCTCCCCGTGCTTGCAAGTTGTACTGTAACAA...GGGCATCTGGGAGGAGGCAGAAGGTCCACTGTGATGTGCTGCAGCCAATGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp TATAAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACATCTTCATCTACTTGCTaGTGTTTCAGGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: YKGTGVCRVSRWGGFTRTSSSTC*CFRGLA
Trigger: TGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGA...TGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp GACTCCCTGATGCTCTTCCCCAGCTTGAATGCACCAAGGAAAGGCCATTTGTGGTCTTCATCTACTTGCTaGTGTTTCAGGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: DSLMLFPSLNAPRKGHLWSSSTC*CFRGLA
Trigger: TGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGA...CCACAAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCATCAGGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp AAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAATTGTGTTTCAGGGGCTaGGCAATTTCCCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: KGTGVCRVSRWGGFTRTKLCFRG*AISHFL
Trigger: CAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAA...TTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp CTTCCCATGGAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGTCTTCATCTACTTGCTaGTGTTTCAGGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LPMESFLNSTRLTPLSPQSSSTC*CFRGLA
Trigger: TGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGA...CTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTCCATGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp TGGACAGGGGATATTAAGCCCCCTGAACTCTCATCTTGTATATGCCATTGTTACAGGTACTCCCTGCCCTaGCAAACTCGCGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: WTGDIKPPELSSCICHCYRYSLP*QTREMW
Trigger: CCACATCTCGCGAGTTTGCAAGGGCAGGGAGTACCT...GTAACAATGGCATATACAAGATGAGAGTTCAGGGGGCTTAATATCCCCTGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp GGTCTCACTCTGTCGTCCAGGTGCAGTGATGCTATCGTGGCTCACTGCAGACCTGAAAACAAATTTCTGTaGTGTAAGCACCCCAGTCTA +
Preference number: 5 (lower is better)
Translates to: GLTLSSRCSDAIVAHCRPENKFL*CKHPSL
Trigger: TAGACTGGGGTGCTTACACAACAGAAATTTGTTTTC...AGGTCTGCAGTGAGCCACGATAGCATCACTGCACCTGGACGACAGAGTGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp AAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAAACCCCATTAGGACACTaGTTTAACAAGACATCTGCC +
Preference number: 5 (lower is better)
Translates to: KGTGVCRVSRWGGFTRTKTPLGH*FNKTSA
Trigger: GGCAGATGTCTTGTTAAACAAGTGTCCTAATGGGGT...TTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp CTTCCCATGGAAAGTTTCCTCAACAGCACAAGGCTGACCCCTCTAAGTCCTCAGGCAATTTCCCATTTCTaGCAGACACAGTACAGGATG +
Preference number: 5 (lower is better)
Translates to: LPMESFLNSTRLTPLSPQAISHF*QTQYRM
Trigger: CATCCTGTACTGTGTCTGCAAGAAATGGGAAATTGC...CTGAGGACTTAGAGGGGTCAGCCTTGTGCTGTTGAGGAAACTTTCCATGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399600.8
CDS-3UTR CAA 90 bp CACCCTTATATCAGGCTATTGGGTGCGTCGGTACTTATGCTGCCCCCTTTTTGCTTGTGTTTCAGGGGCTaGGCAATTTCCCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: HPYIRLLGASVLMLPPFCLCFRG*AISHFL
Trigger: CAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAA...GCAAAAAGGGGGCAGCATAAGTACCGACGCACCCAATAGCCTGATATAAGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp GACTCCCTGATGCTCTTCCCCAGCTTGAATGCACCAAGGAAAGGCCATTTGTGGGTTCCAAGCTGGGATTaGAACATGAATTTACACCCT +
Preference number: 5 (lower is better)
Translates to: DSLMLFPSLNAPRKGHLWVPSWD*NMNLHP
Trigger: AGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAAC...CCACAAATGGCCTTTCCTTGGTGCATTCAAGCTGGGGAAGAGCATCAGGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp CTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTTCCTCCACCAGCTCATaGCAGTGGAATCCTGAACTG +
Preference number: 5 (lower is better)
Translates to: LGFEHEFTPLYQAIGCVGSSTSS*QWNPEL
Trigger: CAGTTCAGGATTCCACTGCAATGAGCTGGTGGAGGA...ACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp TCATCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTTGCTTGGTGAGGGCCTaGCTGGGGATGGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSKVWEVLYLIELHKITTCLVRA*LGMGAW
Trigger: CCAGGCTCCCATCCCCAGCAAGGCCCTCACCAAGCA...AGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000574081.6
CDS-3UTR CAA 90 bp AAGGAACCAGGCAGAGTTTTTCTGATAGGAAGTGAAAGGCCTAGTGACACCCCACCTTATATCAGGCTATaGGGTGCGTCGGTACTTATG +
Preference number: 5 (lower is better)
Translates to: KEPGRVFLIGSERPSDTPPYIRL*GASVLM
Trigger: CATAAGTACCGACGCACCCAATAGCCTGATATAAGG...TGGGGTGTCACTAGGCCTTTCACTTCCTATCAGAAAAACTCTGCCTGGTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp CTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTATTGGGTGCGTCGGTCCAAGGAAAGGCCATTaGTGGGGACATAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: LGFEHEFTPLYQAIGCVGPRKGH*WGHSKK
Trigger: CTTCTTGCTATGTCCCCACAAATGGCCTTTCCTTGG...ACCGACGCACCCAATAGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp AAAGGCACTGGGGTTTGCAGGGTGTCTAGGTGGGGAGGGTTCACGAGAACAAAAGGTAACTTTTGTCCTTaGTCCATTGTTACAGTACAA +
Preference number: 5 (lower is better)
Translates to: KGTGVCRVSRWGGFTRTKGNFCP*SIVTVQ
Trigger: TTGTACTGTAACAATGGACAAAGGACAAAAGTTACC...TTTTGTTCTCGTGAACCCTCCCCACCTAGACACCCTGCAAACCCCAGTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp TCTGGCTGCAGTCATCCGATCGCAGGGGTGTCTTCATCTAAGGTTTGGGAAGTGATCTTGTATATGCCATaGTTACATGCCCCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: SGCSHPIAGVSSSKVWEVILYMP*LHAPFL
Trigger: AAGAAAAGGGGCATGTAACAATGGCATATACAAGAT...CACTTCCCAAACCTTAGATGAAGACACCCCTGCGATCGGATGACTGCAGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp TCATCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGTGATCCGCCCACCTaGGCCTCCCAAGGAGGTATT +
Preference number: 5 (lower is better)
Translates to: SSKVWEVLYLIELHKITTGDPPT*ASQGGI
Trigger: AATACCTCCTTGGGAGGCCAAGGTGGGCGGATCACC...AGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS TCA 90 bp GAGTCTTCTAGAGAAGGCCAATTCCTCGGTGGCAGAGGCGGTAATTaGACTGGCGACTCATTAAGAACATTCTCATACATCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ESSREGQFLGGRGGN*TGDSLRTFSYIFSS
Trigger: TGAAGAAAAGATGTATGAGAATGTTCTTAATGAGTCGCCAGTTCAATTACCGCCTCTGCCACCGAGGAATTGGCCTTCTCTAGAAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399600.8
ENST00000571800.5
ENST00000574081.6
ENST00000574297.1
CDS-3UTR CAA 90 bp AAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCTTTCCCCCAACACACCTATaGCAAAATGATGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: KVWEVLYLIELHKITTGFPPTHL*QNDASR
Trigger: CCTAGAAGCATCATTTTGCAATAGGTGTGTTGGGGG...AAAGCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS-3UTR CAA 90 bp TGTTTATGTTCCAAGCTGGGATTTGAACATGAATTTACACCCTTATATCAGGCTGCAATTTCCCATTTCTaGCAGACACAGTACAGGATG +
Preference number: 5 (lower is better)
Translates to: CLCSKLGFEHEFTPLYQAAISHF*QTQYRM
Trigger: CATCCTGTACTGTGTCTGCAAGAAATGGGAAATTGC...AGCCTGATATAAGGGTGTAAATTCATGTTCAAATCCCAGCTTGGAACATAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571800.5
CDS-3UTR CAA 90 bp TCTAAGGTTTGGGAAGTGCTTTATCTTATAGAGCTTCATAAAATCACCACTGGCGACGAAAGCATGTGTTaGAAACACTCCAATCCTTTG +
Preference number: 5 (lower is better)
Translates to: SKVWEVLYLIELHKITTGDESMC*KHSNPL
Trigger: CAAAGGATTGGAGTGTTTCAAACACATGCTTTCGTC...GCCAGTGGTGATTTTATGAAGCTCTATAAGATAAAGCACTTCCCAAACCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574081.6
CDS TCA 72 bp AGAGAAGGCCAATTCCTCGGTGGCAGAGGCGGTAATTaGACTGGCGACTCATTAAGAACATTCTCATACATC +
Preference number: 6 (lower is better)
Translates to: REGQFLGGRGGN*TGDSLRTFSYI
Trigger: GATGTATGAGAATGTTCTTAATGAGTCGCCAGTTCAATTACCGCCTCTGCCACCGAGGAATTGGCCTTCTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399600.8
ENST00000571800.5
ENST00000574081.6
ENST00000574297.1
CDS CAA 72 bp ATCTTTTCTTCATCTACTTGCTTGTGTTTCAGGGGCTaGGCAATTTCCCATTTCTTGCCTCGTCTAAGCTGC +
Preference number: 6 (lower is better)
Translates to: IFSSSTCLCFRG*AISHFLPRLSC
Trigger: GCAGCTTAGACGAGGCAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574081.6
ENST00000574297.1
CDS CAA 72 bp ATCTTTTCTTCATCTACTTGCTTGTGTTTCAGGGGCTaGGCAATTTCCCATTTCTTGCAGACACAGTACAGG +
Preference number: 6 (lower is better)
Translates to: IFSSSTCLCFRG*AISHFLQTQYR
Trigger: CCTGTACTGTGTCTGCAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGAAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000571800.5
CDS CAA 90 bp TGGCGACTCATTAAGAACATTCTCATACATCTTTTCTTCATCTACTaGCTTGTGTTTCAGGGGCTTGGCAATTTCCCATTTCTTGCCTCG +
Preference number: 6 (lower is better)
Translates to: WRLIKNILIHLFFIY*LVFQGLGNFPFLAS
Trigger: CGAGGCAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGAAAAGATGTATGAGAATGTTCTTAATGAGTCGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574081.6
ENST00000574297.1
CDS CAA 90 bp TGGCGACTCATTAAGAACATTCTCATACATCTTTTCTTCATCTACTaGCTTGTGTTTCAGGGGCTTGGCAATTTCCCATTTCTTGCAGAC +
Preference number: 6 (lower is better)
Translates to: WRLIKNILIHLFFIY*LVFQGLGNFPFLAD
Trigger: GTCTGCAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGAAAAGATGTATGAGAATGTTCTTAATGAGTCGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000571800.5
CDS CAA 90 bp GACTCATTAAGAACATTCTCATACATCTTTTCTTCATCTACTTGCTaGTGTTTCAGGGGCTTGGCAATTTCCCATTTCTTGCAGACACAG +
Preference number: 6 (lower is better)
Translates to: DSLRTFSYIFSSSTC*CFRGLAISHFLQTQ
Trigger: CTGTGTCTGCAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGAAAAGATGTATGAGAATGTTCTTAATGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399600.8
ENST00000571800.5
CDS CAA 90 bp GACTCATTAAGAACATTCTCATACATCTTTTCTTCATCTACTTGCTaGTGTTTCAGGGGCTTGGCAATTTCCCATTTCTTGCCTCGTCTA +
Preference number: 6 (lower is better)
Translates to: DSLRTFSYIFSSSTC*CFRGLAISHFLPRL
Trigger: TAGACGAGGCAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGAAAAGATGTATGAGAATGTTCTTAATGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574081.6
ENST00000574297.1
CDS CAA 72 bp AGAACATTCTCATACATCTTTTCTTCATCTACTTGCTaGTGTTTCAGGGGCTTGGCAATTTCCCATTTCTTG +
Preference number: 6 (lower is better)
Translates to: RTFSYIFSSSTC*CFRGLAISHFL
Trigger: CAAGAAATGGGAAATTGCCAAGCCCCTGAAACACAAGCAAGTAGATGAAGAAAAGATGTATGAGAATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399600.8
ENST00000571800.5
ENST00000574081.6
ENST00000574297.1