Pregenerated sensors for SCGB3A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000161055Ensembl transcript IDs: ENST00000292641.4, ENST00000512120.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGTTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAACGGCCCCCACGGCCTaGGGACCCAGCTCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GFQPSRVGSVLSSGVDAPTAPTA*GPSSAT Trigger: TGTGGCTGAGCTGGGTCCCCAGGCCGTGGGGGCCGT...TGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAAACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR TCA 90 bp | TTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCGGAGCTTCAGCGGGTTaGGGGTGCCGAGGGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: FQPSRVGSVLSSGVDAPVGASAG*GCRGGW Trigger: CCAACCCCCTCGGCACCCTCAACCCGCTGAAGCTCC...GACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR GCA 90 bp | TCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCTCCGGGGATGCCCAGGCTaGTCAGCAGGAGCTTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: SALAGGQRLVLRCRCSSLRGCPG*SAGASA Trigger: CGCTGAAGCTCCTGCTGAGCAGCCTGGGCATCCCCG...GAGACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR GCA 90 bp | CGGCGGGGTTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGGTGGTTCACGGGGATaGCCAGGCTGCTCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RRGFQPSRVGSVLSSGVDGGSRG*PGCSAG Trigger: TCCTGCTGAGCAGCCTGGGCATCCCCGTGAACCACC...ATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAAACCCCGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR CCA 90 bp | TTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTAGCGCAGCGACAGGCTaGGCCACAGGCTTGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: FSALAGGQRLVLRCRCSSSAATG*ATGLAE Trigger: CTCGGCCAAGCCTGTGGCCCAGCCTGTCGCTGCGCT...ACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR CCA 90 bp | CAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCTCGGAGCCCTCTATGAGGTaGTTCACGGGGATGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QPSRVGSVLSSGVDAPVSEPSMR*FTGMPR Trigger: CCTGGGCATCCCCGTGAACCACCTCATAGAGGGCTC...CGAGACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR GCA 90 bp | TTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCAAGCAGCAGCGGAGCTaGAGGACAGGGCCACGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FQPSRVGSVLSSGVDAPVKQQRS*RTGPRR Trigger: TCTGCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTT...GACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR CCA 90 bp | TCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCTCGCTGGGCCACAGGCTTaGCCGAGCCCACTAAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SALAGGQRLVLRCRCSSLAGPQA*PSPLRK Trigger: CTTTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGC...GAGACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR CCA 90 bp | TTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCTTCAGCCCTCGCGGGTaGGCAGCGTCTTGTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FQPSRVGSVLSSGVDAPVFSPRG*AASCPQ Trigger: CTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAA...GACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR TCA 90 bp | GGTTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCATCTGGGAGCCCTCTATaGGGTGGTTCACGGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: GFQPSRVGSVLSSGVDAPSGSPL*GGSRGC Trigger: GCATCCCCGTGAACCACCTCATAGAGGGCTCCCAGA...TGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR CCA 90 bp | CAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCTCGTCAGCCACACACTTCTaGGAGCCCTCTATGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QPSRVGSVLSSGVDAPVSSATHF*EPSMRW Trigger: CCACCTCATAGAGGGCTCCCAGAAGTGTGTGGCTGA...CGAGACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR GCA 90 bp | TTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCGTCCTCAGGTGTAGATaGTCCAGTCTCGGCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FQPSRVGSVLSSGVDAPVVLRCR*SSLGSA Trigger: GGCTGAGCCGAGACTGGAGCATCTACACCTGAGGAC...GACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR TCA 90 bp | TTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCTTAACCACGTTTATTaGGAGGGGCCGGGGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: FSALAGGQRLVLRCRCSSLNHVY*EGPGEG Trigger: CCCTTCCCCCGGCCCCTCTCAATAAACGTGGTTAAG...ACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS CCA 90 bp | CCTCCGCCGCCGACTCCAGCGCAGCGACAGGCTGGGCCACAGGCTTaGCCGAGCCCACTAAGAAAGCAGCAGCGGAGCTGCAGGACAGGG | + |
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Preference number: 5 (lower is better) Translates to: PPPPTPAQRQAGPQA*PSPLRKQQRSCRTG Trigger: CCCTGTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGCCTGTCGCTGCGCTGGAGTCGGCGGCGGAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS CCA 90 bp | AGGGCCCCCAGCAGGGCCTTCAGGGCCTTCACGGCCCCCACGGCCTaGGGACCCAGCTCAGCCACACACTTCTGGGAGCCCTCTATGAGG | + |
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Preference number: 5 (lower is better) Translates to: RAPSRAFRAFTAPTA*GPSSATHFWEPSMR Trigger: CCTCATAGAGGGCTCCCAGAAGTGTGTGGCTGAGCTGGGTCCCCAGGCCGTGGGGGCCGTGAAGGCCCTGAAGGCCCTGCTGGGGGCCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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| CDS CCA 90 bp | CCTCCGCCGCCGACTCCAGCGCAGCGACAGGCTGGGCCACAGGCTTaGCCGAGCCCACTAAGAAAGCAGCAGCTGCAAGCGAACAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PPPPTPAQRQAGPQA*PSPLRKQQLQANRE Trigger: CTCCCTGTTCGCTTGCAGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGCCTGTCGCTGCGCTGGAGTCGGCGGCGGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512120.1 |
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| CDS TCA 90 bp | CGGCCTGGGGACCCAGCTCAGCCACACACTTCTGGGAGCCCTCTATaGGGTGGTTCACGGGGATGCCCAGGCTGCTCAGCAGGAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RPGDPAQPHTSGSPL*GGSRGCPGCSAGAS Trigger: TGAAGCTCCTGCTGAGCAGCCTGGGCATCCCCGTGAACCACCTCATAGAGGGCTCCCAGAAGTGTGTGGCTGAGCTGGGTCCCCAGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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| CDS CCA 90 bp | TGGGGACCCAGCTCAGCCACACACTTCTGGGAGCCCTCTATGAGGTaGTTCACGGGGATGCCCAGGCTGCTCAGCAGGAGCTTCAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: WGPSSATHFWEPSMR*FTGMPRLLSRSFSG Trigger: CCCGCTGAAGCTCCTGCTGAGCAGCCTGGGCATCCCCGTGAACCACCTCATAGAGGGCTCCCAGAAGTGTGTGGCTGAGCTGGGTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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| CDS-3UTR CAA 90 bp | TCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCTCAGGAGCTTCAGCGGGTaGAGGGTGCCGAGGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SALAGGQRLVLRCRCSSLRSFSG*RVPRGL Trigger: CAACCCCCTCGGCACCCTCAACCCGCTGAAGCTCCT...GAGACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS GCA 90 bp | TTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATaGTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: FSALAGGQRLVLRCR*SSLGSAKHCQGPQQ Trigger: CTGCTGGGGGCCCTGACAGTGTTTGGCTGAGCCGAGACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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| CDS-3UTR CAA 90 bp | TTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCGGCTGGGCCACAGGCTaGGCCGAGCCCACTAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: FQPSRVGSVLSSGVDAPVGWATG*AEPTKK Trigger: TTTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGCC...GACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS-3UTR CAA 90 bp | TTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATGCTCCAGTCCGGGTGGGCAGCGTCTaGTCCTCAGGTGTAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: FQPSRVGSVLSSGVDAPVRVGSV*SSGVDA Trigger: AGCATCTACACCTGAGGACAAGACGCTGCCCACCCG...GACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS CCA 72 bp | CCGGCCTCCGCCGCCGACTCCAGCGCAGCGACAGGCTaGGCCACAGGCTTGGCCGAGCCCACTAAGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: PASAADSSAATG*ATGLAEPTKKA Trigger: TGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGCCTGTCGCTGCGCTGGAGTCGGCGGCGGAGGCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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| CDS CCA 72 bp | AGCAGGGCCTTCAGGGCCTTCACGGCCCCCACGGCCTaGGGACCCAGCTCAGCCACACACTTCTGGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRAFRAFTAPTA*GPSSATHFWEP Trigger: GGGCTCCCAGAAGTGTGTGGCTGAGCTGGGTCCCCAGGCCGTGGGGGCCGTGAAGGCCCTGAAGGCCCTGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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| CDS CAA 90 bp | GCCTCCGCCGCCGACTCCAGCGCAGCGACAGGCTGGGCCACAGGCTaGGCCGAGCCCACTAAGAAAGCAGCAGCGGAGCTGCAGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: ASAADSSAATGWATG*AEPTKKAAAELQDR Trigger: CCTGTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGCCTGTCGCTGCGCTGGAGTCGGCGGCGGAGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292641.4 |
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| CDS CAA 90 bp | GCCTCCGCCGCCGACTCCAGCGCAGCGACAGGCTGGGCCACAGGCTaGGCCGAGCCCACTAAGAAAGCAGCAGCTGCAAGCGAACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: ASAADSSAATGWATG*AEPTKKAAAASEQG Trigger: TCCCTGTTCGCTTGCAGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGCCTGTCGCTGCGCTGGAGTCGGCGGCGGAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512120.1 |
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| CDS CCA 72 bp | CCCACGGCCTGGGGACCCAGCTCAGCCACACACTTCTaGGAGCCCTCTATGAGGTGGTTCACGGGGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: PTAWGPSSATHF*EPSMRWFTGMP Trigger: GGGCATCCCCGTGAACCACCTCATAGAGGGCTCCCAGAAGTGTGTGGCTGAGCTGGGTCCCCAGGCCGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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| CDS CAA 72 bp | CGGCGGGGTTTTCAGCCCTCGCGGGTGGGCAGCGTCTaGTCCTCAGGTGTAGATGCTCCAGTCTCGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RRGFQPSRVGSV*SSGVDAPVSAQ Trigger: CTGAGCCGAGACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAGGGCTGAAAACCCCGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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| CDS TCA 72 bp | GACCCAGCTCAGCCACACACTTCTGGGAGCCCTCTATaGGGTGGTTCACGGGGATGCCCAGGCTGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: DPAQPHTSGSPL*GGSRGCPGCSA Trigger: TGCTGAGCAGCCTGGGCATCCCCGTGAACCACCTCATAGAGGGCTCCCAGAAGTGTGTGGCTGAGCTGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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| CDS GCA 72 bp | CTCGCGGGTGGGCAGCGTCTTGTCCTCAGGTGTAGATaGTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LAGGQRLVLRCR*SSLGSAKHCQG Trigger: GCCCTGACAGTGTTTGGCTGAGCCGAGACTGGAGCATCTACACCTGAGGACAAGACGCTGCCCACCCGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000292641.4 ENST00000512120.1 |
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