RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCGB2B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000205209

Ensembl transcript IDs: ENST00000379204.2, ENST00000595326.1, ENST00000601241.5, ENST00000601241.6

Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCCCAAGGAAGAGGAGGGCCAATATCTaGTCTGCAGGGGTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: VSVVMNRARPGTRGAPRKRRANI*SAGVLR
Trigger: TCTGAGGACCCCTGCAGATCAGATATTGGCCCTCCT...CTTCCTTGGGGCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379204.2
ENST00000601241.5
3UTR-3UTR TCA 90 bp GTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCAGGAGGGCCAATATCTaGTCTGCAGGGGTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: VHWGLCSDEQSQARNAGSRRANI*SAGVLR
Trigger: TCTGAGGACCCCTGCAGATCAGATATTGGCCCTCCT...GCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379204.2
ENST00000601241.5
CDS-3UTR TCA 90 bp TTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCAGGAGGGCCAATATCTaGTCTGCAGGGGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: FIGVSVVMNRARPGTRGARRANI*SAGVLR
Trigger: TCTGAGGACCCCTGCAGATCAGATATTGGCCCTCCT...GGCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS-3UTR GCA 90 bp GTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCCCAAGGAAGGGCCAATATCTGATCTaGAGGGGTCCTCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: VSVVMNRARPGTRGAPRKGQYLI*RGPQIR
Trigger: TCTGATCTGAGGACCCCTGCAGATCAGATATTGGCC...CTTCCTTGGGGCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS-3UTR CCA 90 bp GTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCTGTCACGGAGACATTaGCAAAGCATTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: VHWGLCSDEQSQARNAGSLSRRH*QSIAGH
Trigger: ATGTCCAGCAATGCTTTGCCAATGTCTCCGTGACAG...GCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS-3UTR CCA 90 bp GGTGTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGGCTGCAGGTGTTCATTaGGGTCTCTGTAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: GVHWGLCSDEQSQARNAGAAGVH*GLCSDE
Trigger: TTCATCACTACAGAGACCCCAATGAACACCTGCAGC...CCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS-3UTR GCA 90 bp GTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCAGAAGGCTGCTTCTATaGAATCGTTGCTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VHWGLCSDEQSQARNAGSRRLLL*NRCSEG
Trigger: TCCTTCAGAGCAACGATTGCATAGAAGCAGCCTTCT...GCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS-3UTR GCA 90 bp GTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCTCAGATCAGAAGGCTaGTTCTATGCAATCGTTGCT +
Preference number: 4 (lower is better)
Translates to: VHWGLCSDEQSQARNAGSLRSEG*FYAIVA
Trigger: AGCAACGATTGCATAGAAGCAGCCTTCTGATCTGAG...GCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS-3UTR GCA 90 bp GCAGGTGTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGACATTGGCAAAGCATTaGTGGACATTGAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: AGVHWGLCSDEQSQARNATLAKH*WTLRKD
Trigger: GTCCTTCCTCAATGTCCAGCAATGCTTTGCCAATGT...CGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAACACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS-3UTR CCA 90 bp CAGGTGTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGTCCTTCAGGAGGTCTTaGGACACATCAAACACAACA +
Preference number: 4 (lower is better)
Translates to: QVFIGVSVVMNRARPGTRSFRRS*DTSNTT
Trigger: TGTTGTGTTTGATGTGTCCCAAGACCTCCTGAAGGA...CCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS-3UTR TCA 90 bp GTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCCCAAGGAAGATGCAATCGTTGCTCTaGAGGATCTTCTTAATAACA +
Preference number: 4 (lower is better)
Translates to: VSVVMNRARPGTRGAPRKMQSLL*RIFLIT
Trigger: TGTTATTAAGAAGATCCTTCAGAGCAACGATTGCAT...CTTCCTTGGGGCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS TCA 90 bp CTGCCCCAGCCTCTGTCTCCCTCGTGTCTCTCCAGGGCTGCACTGTaGCAAGGCCACGGTGTCTACCTGGACGGCCACAGGGACTCCCAG +
Preference number: 5 (lower is better)
Translates to: LPQPLSPSCLSRAAL*QGHGVYLDGHRDSQ
Trigger: CTGGGAGTCCCTGTGGCCGTCCAGGTAGACACCGTGGCCTTGTCACAGTGCAGCCCTGGAGAGACACGAGGGAGACAGAGGCTGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 90 bp GGTTTGTGCCCTACTGTGTCAAGGGAGGGTCTGGCTAGGAGCACCTaGGGGACACGCCCGGTGCAGAGGACACTCACTGGGCTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: GLCPTVSREGLARST*GTRPVQRTLTGLLR
Trigger: TCTCAGCAGCCCAGTGAGTGTCCTCTGCACCGGGCGTGTCCCTCAGGTGCTCCTAGCCAGACCCTCCCTTGACACAGTAGGGCACAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp GCCGCTCCAATAGCGGTTTGTGCCCTACTGTGTCAAGGGAGGGTCTaGCTAGGAGCACCTGAGGGACACGCCCGGTGCAGAGGACACTCA +
Preference number: 5 (lower is better)
Translates to: AAPIAVCALLCQGRV*LGAPEGHARCRGHS
Trigger: TGAGTGTCCTCTGCACCGGGCGTGTCCCTCAGGTGCTCCTAGCCAGACCCTCCCTTGACACAGTAGGGCACAAACCGCTATTGGAGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp CGTGTCTCTCCAGGGCTGCACTGTGACAAGGCCACGGTGTCTACCTaGACGGCCACAGGGACTCCCAGTTGGTCTTCCTGCCTCTACTGC +
Preference number: 5 (lower is better)
Translates to: RVSPGLHCDKATVST*TATGTPSWSSCLYC
Trigger: GCAGTAGAGGCAGGAAGACCAACTGGGAGTCCCTGTGGCCGTCCAGGTAGACACCGTGGCCTTGTCACAGTGCAGCCCTGGAGAGACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp GGGGAAGGCAGCAGGGATGCTGACGCTTGTACACTCGGGTGCCAGTaGCGCTCCAATAGCGGTTTGTGCCCTACTGTGTCAAGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GEGSRDADACTLGCQ*RSNSGLCPTVSREG
Trigger: ACCCTCCCTTGACACAGTAGGGCACAAACCGCTATTGGAGCGGCACTGGCACCCGAGTGTACAAGCGTCAGCATCCCTGCTGCCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 90 bp TTAGGCTGTGCCACCCAGACTGAGTGGGCTCACCTCGGCCAGGCATaGGCCATCACTGTGCACGTACAGAACCTCATAGTAGCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGCATQTEWAHLGQA*AITVHVQNLIVAPR
Trigger: CCTGGGCGCTACTATGAGGTTCTGTACGTGCACAGTGATGGCTCATGCCTGGCCGAGGTGAGCCCACTCAGTCTGGGTGGCACAGCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp CCTCTTCACCTTGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCTaGCTTGTTTTCCACTGGGTGCCCGGCTCTGGGAAAGGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: PLHLGCELQGSRAVT*LVFHWVPGSGKGPD
Trigger: ATCAGGCCCTTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 90 bp GACTCAGGGGAGATGTTGTCTCCTCAGATGCCTTCTGGGACCACCTaGCCAATGTGGCACCTCAAGCCAGTCCCGCCTGATCACATTTCC +
Preference number: 5 (lower is better)
Translates to: DSGEMLSPQMPSGTT*PMWHLKPVPPDHIS
Trigger: GGAAATGTGATCAGGCGGGACTGGCTTGAGGTGCCACATTGGTCAGGTGGTCCCAGAAGGCATCTGAGGAGACAACATCTCCCCTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp TGCCTCAGGTTCTTCAGGACTCAGGGGAGATGTTGTCTCCTCAGATaGCTTCTGGGACCACCTGACCAATGTGGCACCTCAAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: CLRFFRTQGRCCLLR*LLGPPDQCGTSSQS
Trigger: GGACTGGCTTGAGGTGCCACATTGGTCAGGTGGTCCCAGAAGGCATCTGAGGAGACAACATCTCCCCTGAGTCCTGAAGAACCTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp ACATCCTCTCCCCATATTCAATTCAACAGCAGGTGCTGTCAGTGCTaGCCCAGCCTCTGTCTCCCTCGTGTCTCTCCAGGGCTGCACTGT +
Preference number: 5 (lower is better)
Translates to: TSSPHIQFNSRCCQC*PSLCLPRVSPGLHC
Trigger: ACAGTGCAGCCCTGGAGAGACACGAGGGAGACAGAGGCTGGGGCAGCACTGACAGCACCTGCTGTTGAATTGAATATGGGGAGAGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp AAGGTAGTGCAGACCCAAAGAGCAAAAGAACAAACATCCCACACCTaGGAAGTAGACCCCAGCGCGGTTGCCGCTGGTTGTTCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: KVVQTQRAKEQTSHT*EVDPSAVAAGCSGG
Trigger: GCCACCCGAACAACCAGCGGCAACCGCGCTGGGGTCTACTTCCCAGGTGTGGGATGTTTGTTCTTTTGCTCTTTGGGTCTGCACTACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp AGGCGGTGCGTCTGGAGTCGTGCTGGAGTTGTTTGTTCCTCCCGGTaGGTTCATGATTTCGCTGGCTTCAGGAGTGAAGCTGCAGACCTT +
Preference number: 5 (lower is better)
Translates to: RRCVWSRAGVVCSSR*VHDFAGFRSEAADL
Trigger: AAGGTCTGCAGCTTCACTCCTGAAGCCAGCGAAATCATGAACCCACCGGGAGGAACAAACAACTCCAGCACGACTCCAGACGCACCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp TCCTTTCTCATCATGCCGCATTCCCTGCCCCAGACCTTCACCTGGTaGCTGCCTCAGGTTCTTCAGGACTCAGGGGAGATGTTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SFLIMPHSLPQTFTW*LPQVLQDSGEMLSP
Trigger: AGGAGACAACATCTCCCCTGAGTCCTGAAGAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp AGCTGCACTGGCCATTTCTCCAACACAACAAATCCTTTCTCATCATaGCGCATTCCCTGCCCCAGACCTTCACCTGGTGGCTGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SCTGHFSNTTNPFSS*RIPCPRPSPGGCLR
Trigger: CCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTTGTTGTGTTGGAGAAATGGCCAGTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp TGGATGTGGGAAACTTATCCAGGCCAGCATGGGACTCTGGATCTTTaGCCTAAACCTGCTCCTCCCCAGGCTTCACCTTCTCAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: WMWETYPGQHGTLDL*PKPAPPQASPSQQW
Trigger: CCACTGCTGAGAAGGTGAAGCCTGGGGAGGAGCAGGTTTAGGGCAAAGATCCAGAGTCCCATGCTGGCCTGGATAAGTTTCCCACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp CTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTGGGTTCCTGGTCTaGCTGGCTTCAGGAGTGAAGCTGCAGACCCTCGCGGTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: LVMCPELVPSGGFLV*LASGVKLQTLAVCV
Trigger: AACACACACCGCGAGGGTCTGCAGCTTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp GTCCTCACTGCTGCTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTaGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAAGCTGCAGACCCT +
Preference number: 5 (lower is better)
Translates to: VLTAACYVSGIGSFW*VPGLAGFRSEAADP
Trigger: AGGGTCTGCAGCTTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp GGTGTCCTCACTGCTGCTTGTTATGTGTCCGGAATTGGTTCCTTCTaGTGGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAAGCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: GVLTAACYVSGIGSF*WVPGLAGFRSEAAD
Trigger: GTCTGCAGCTTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 90 bp TTCTGGGACCACCTGACCAATGTGGCACCTCAAGCCAGTCCCGCCTaGTCACATTTCCCTGTTGGGTGGTCCTTGTGGTTCTCATCACTA +
Preference number: 5 (lower is better)
Translates to: FWDHLTNVAPQASPA*SHFPVGWSLWFSSL
Trigger: TAGTGATGAGAACCACAAGGACCACCCAACAGGGAAATGTGATCAGGCGGGACTGGCTTGAGGTGCCACATTGGTCAGGTGGTCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp CCTCTGCCTCTGCATCTGGGTCTGTGTCTTTGGTGTCCTCACTGCTaGTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTGGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PLPLHLGLCLWCPHC*LLCVRNWFLLVGSW
Trigger: CCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGACCCAGATGCAGAGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp AAATCCTTTCTCATCATGCCGCATTCCCTGCCCCAGACCTTCACCTaGTGGCTGCCTCAGGTTCTTCAGGACTCAGGGGAGATGTTGTCT +
Preference number: 5 (lower is better)
Translates to: KSFLIMPHSLPQTFT*WLPQVLQDSGEMLS
Trigger: AGACAACATCTCCCCTGAGTCCTGAAGAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp GAGCTCCAAACTAGAGCGTCTCACACCCCCTGTGTCCCGTCCTCCTaGATAGCTAATGGATGTCTTGGATGTGGGAAACTTATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: ELQTRASHTPCVPSS*IANGCLGCGKLIQA
Trigger: GGCCTGGATAAGTTTCCCACATCCAAGACATCCATTAGCTATCCAGGAGGACGGGACACAGGGGGTGTGAGACGCTCTAGTTTGGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS-3UTR CAA 90 bp GTGTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGACTCCTTCAGGAGGTCTaGGGACACATCAAACACAAC +
Preference number: 5 (lower is better)
Translates to: VFIGVSVVMNRARPGTRGLLQEV*GHIKHN
Trigger: GTTGTGTTTGATGTGTCCCAAGACCTCCTGAAGGAG...TCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379204.2
CDS TCA 90 bp AGCCGTGTGTGCCCTGCTGAAGGTGGGTCTGCACTTGTAGGGAAATaGGCTCTCAAAGATCCAGGGAGAAAGAAGATCCAGGCTGGTATT +
Preference number: 5 (lower is better)
Translates to: SRVCPAEGGSALVGK*ALKDPGRKKIQAGI
Trigger: AATACCAGCCTGGATCTTCTTTCTCCCTGGATCTTTGAGAGCTCATTTCCCTACAAGTGCAGACCCACCTTCAGCAGGGCACACACGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp CATTTCTCCAACACAACAAATCCTTTCTCATCATGCCGCATTCCCTaGCCCAGACCTTCACCTGGTGGCTGCCTCAGGTTCTTCAGGACT +
Preference number: 5 (lower is better)
Translates to: HFSNTTNPFSSCRIP*PRPSPGGCLRFFRT
Trigger: AGTCCTGAAGAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTTGTTGTGTTGGAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 90 bp GTGTTTACAGAGAAGACAGCGGGTCTTGCTCTGAGCATGGGAACATaGTGGCAATTAGGAGGCTTTCCTCCTCAGAGGCCTTTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: VFTEKTAGLALSMGT*WQLGGFPPQRPFVA
Trigger: AGCCACAAAAGGCCTCTGAGGAGGAAAGCCTCCTAATTGCCATCATGTTCCCATGCTCAGAGCAAGACCCGCTGTCTTCTCTGTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp GTCTTTCTCCCTGAGCACAGTGTTTACAGAGAAGACAGCGGGTCTTaGTCTGAGCATGGGAACATGATGGCAATTAGGAGGCTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VFLPEHSVYREDSGS*SEHGNMMAIRRLSS
Trigger: GGAGGAAAGCCTCCTAATTGCCATCATGTTCCCATGCTCAGAGCAAGACCCGCTGTCTTCTCTGTAAACACTGTGCTCAGGGAGAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp TCGTTTTCTGACGTGACCTCCTTCCCTGCTGCCCCTTGTTCCAGCTaGACTGGCCATTTCTCCAACACAACAAATCCTTTCTCATCATGC +
Preference number: 5 (lower is better)
Translates to: SFSDVTSFPAAPCSS*TGHFSNTTNPFSSC
Trigger: GCATGATGAGAAAGGATTTGTTGTGTTGGAGAAATGGCCAGTGCAGCTGGAACAAGGGGCAGCAGGGAAGGAGGTCACGTCAGAAAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp CAATGTGGCACCTCAAGCCAGTCCCGCCTGATCACATTTCCCTGTTaGGTGGTCCTTGTGGTTCTCATCACTATTACAATTTTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: QCGTSSQSRLITFPC*VVLVVLITITIFLS
Trigger: GCTCAAGAAAATTGTAATAGTGATGAGAACCACAAGGACCACCCAACAGGGAAATGTGATCAGGCGGGACTGGCTTGAGGTGCCACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp GGTGGTCCTTGTGGTTCTCATCACTATTACAATTTTCTTGAGCTTTaGAACCCCCTCTTCACCTTGGATGTGAACTTCAGGGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GGPCGSHHYYNFLEL*NPLFTLDVNFREAG
Trigger: CCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTAATAGTGATGAGAACCACAAGGACCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 90 bp CCTGTTGGGTGGTCCTTGTGGTTCTCATCACTATTACAATTTTCTTaGGCTTTGCAACCCCCTCTTCACCTTGGATGTGAACTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: PVGWSLWFSSLLQFS*ALQPPLHLGCELQG
Trigger: TCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTAATAGTGATGAGAACCACAAGGACCACCCAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp TTAAATGAGTCTCCTTTGTGCTCAAACAGCATAACTTTAACTTGTTaGAGAGTAGCTAGTAGGAGCGGCCTTGACTGGGAGCCTGCACGT +
Preference number: 5 (lower is better)
Translates to: LNESPLCSNSITLTC*RVASRSGLDWEPAR
Trigger: ACGTGCAGGCTCCCAGTCAAGGCCGCTCCTACTAGCTACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGACTCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp CAATATCTGATCTGCAGGGGTCCTCAGATCAGAAGGCTGCTTCTATaGAATCGTTGCTCTGAAGGATCTTCTTCGTATTTTCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: QYLICRGPQIRRLLL*NRCSEGSSSYFLHL
Trigger: AAGATGAAGAAAATACGAAGAAGATCCTTCAGAGCAACGATTGCATAGAAGCAGCCTTCTGATCTGAGGACCCCTGCAGATCAGATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595326.1
CDS GCA 90 bp AGCACGCTAAGAGAAACGCTCATCAGTGCCATGGCAATTTACAAATaGCATGGTAAGGTTCAGAAGTTACCCTGTATGGTTCAAAAAGCT +
Preference number: 5 (lower is better)
Translates to: STLRETLISAMAIYK*HGKVQKLPCMVQKA
Trigger: AGCTTTTTGAACCATACAGGGTAACTTCTGAACCTTACCATGGCATTTGTAAATTGCCATGGCACTGATGAGCGTTTCTCTTAGCGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp TTTTACAGAGTGCTGTTTGGTCCGTTTTTACAGAGTGCTGACTGGTaGATTTACAAACCTTTAGCTAGACACAGAGCACTGATTGGTGTA +
Preference number: 5 (lower is better)
Translates to: FYRVLFGPFLQSADW*IYKPLARHRALIGV
Trigger: TACACCAATCAGTGCTCTGTGTCTAGCTAAAGGTTTGTAAATGCACCAGTCAGCACTCTGTAAAAACGGACCAAACAGCACTCTGTAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp TGGCAATTTACAAATGCCATGGTAAGGTTCAGAAGTTACCCTGTATaGTTCAAAAAGCTGGGAAGCCCTCAGCTCCGAGAAATTGAAATT +
Preference number: 5 (lower is better)
Translates to: WQFTNAMVRFRSYPV*FKKLGSPQLREIEI
Trigger: AATTTCAATTTCTCGGAGCTGAGGGCTTCCCAGCTTTTTGAACCATACAGGGTAACTTCTGAACCTTACCATGGCATTTGTAAATTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 90 bp CTATTTTACAGAGTGCTGTTTGGTCCGTTTTTACAGAGTGCTGACTaGTGCATTTACAAACCTTTAGCTAGACACAGAGCACTGATTGGT +
Preference number: 5 (lower is better)
Translates to: LFYRVLFGPFLQSAD*CIYKPLARHRALIG
Trigger: ACCAATCAGTGCTCTGTGTCTAGCTAAAGGTTTGTAAATGCACCAGTCAGCACTCTGTAAAAACGGACCAAACAGCACTCTGTAAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 90 bp TGCTCTGAAGGATCTTCTTCGTATTTTCTTCATCTTTTCACTTGTTaGTGGACACTGAGGTTGAGTCAAATCTTGGCTGTGAATAGTGTG +
Preference number: 5 (lower is better)
Translates to: CSEGSSSYFLHLFTC*WTLRLSQILAVNSV
Trigger: CACACTATTCACAGCCAAGATTTGACTCAACCTCAGTGTCCATCAACAAGTGAAAAGATGAAGAAAATACGAAGAAGATCCTTCAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595326.1
CDS TCA 90 bp AGCTCCGAGAAATTGAAATTGCCCACCTCTTTCCTGGAAAACTCATaGATAATCCACCCTTGTTTAGCACATCATCAAGCAATAAATACA +
Preference number: 5 (lower is better)
Translates to: SSEKLKLPTSFLENS*IIHPCLAHHQAINT
Trigger: TGTATTTATTGCTTGATGATGTGCTAAACAAGGGTGGATTATTCATGAGTTTTCCAGGAAAGAGGTGGGCAATTTCAATTTCTCGGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 90 bp ACAGGCATAATCTATAGCAATAGCAGTTTAAATGAGTCTCCTTTGTaGTCAAACAGCATAACTTTAACTTGTTGGAGAGTAGCTAGTAGG +
Preference number: 5 (lower is better)
Translates to: TGIIYSNSSLNESPL*SNSITLTCWRVASR
Trigger: CCTACTAGCTACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGACTCATTTAAACTGCTATTGCTATAGATTATGCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp CCTACTGTGTCAAGGGAGGGTCTGGCTAGGAGCACCTaGGGGACACGCCCGGTGCAGAGGACACTCACTGGG +
Preference number: 6 (lower is better)
Translates to: PTVSREGLARST*GTRPVQRTLTG
Trigger: CCCAGTGAGTGTCCTCTGCACCGGGCGTGTCCCTCAGGTGCTCCTAGCCAGACCCTCCCTTGACACAGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp GAAGCAGGGCCGTCACCTGCCTTGTTTTCCACTGGGTaGCCGGCTCTGGGAAAGGGCCTGATGTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: EAGPSPALFSTG*PALGKGLMCGR
Trigger: CCTGCCACACATCAGGCCCTTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp CCAGGGCTGCACTGTGACAAGGCCACGGTGTCTACCTaGACGGCCACAGGGACTCCCAGTTGGTCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: PGLHCDKATVST*TATGTPSWSSC
Trigger: GCAGGAAGACCAACTGGGAGTCCCTGTGGCCGTCCAGGTAGACACCGTGGCCTTGTCACAGTGCAGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp ACACTCGGGTGCCAGTGCCGCTCCAATAGCGGTTTGTaGCCTACTGTGTCAAGGGAGGGTCTGGCTAGGAGC +
Preference number: 6 (lower is better)
Translates to: TLGCQCRSNSGL*PTVSREGLARS
Trigger: GCTCCTAGCCAGACCCTCCCTTGACACAGTAGGGCACAAACCGCTATTGGAGCGGCACTGGCACCCGAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp ATAGCGGTTTGTGCCCTACTGTGTCAAGGGAGGGTCTaGCTAGGAGCACCTGAGGGACACGCCCGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: IAVCALLCQGRV*LGAPEGHARCR
Trigger: TCTGCACCGGGCGTGTCCCTCAGGTGCTCCTAGCCAGACCCTCCCTTGACACAGTAGGGCACAAACCGCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp TGCAAAGATAGGGTGGTCAGCAGTGGAGCCTTGTCCTaGCCAGCCGTGTGTGCCCTGCTGAAGGTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: CKDRVVSSGALS*PAVCALLKVGL
Trigger: CAGACCCACCTTCAGCAGGGCACACACGGCTGGCCAGGACAAGGCTCCACTGCTGACCACCCTATCTTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 72 bp GATGTGAACTTCAGGGAAGCAGGGCCGTCACCTGCCTaGTTTTCCACTGGGTGCCCGGCTCTGGGAAAGGGC +
Preference number: 6 (lower is better)
Translates to: DVNFREAGPSPA*FSTGCPALGKG
Trigger: GCCCTTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp GGACACGCCCGGTGCAGAGGACACTCACTGGGCTGCTaGGAGCCATGTAGAACCGCAGAGCAGTTCCTAGAT +
Preference number: 6 (lower is better)
Translates to: GHARCRGHSLGC*EPCRTAEQFLD
Trigger: ATCTAGGAACTGCTCTGCGGTTCTACATGGCTCTCAGCAGCCCAGTGAGTGTCCTCTGCACCGGGCGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp GAAGGCAGCAGGGATGCTGACGCTTGTACACTCGGGTaGCAGTGCCGCTCCAATAGCGGTTTGTGCCCTACT +
Preference number: 6 (lower is better)
Translates to: EGSRDADACTLG*QCRSNSGLCPT
Trigger: AGTAGGGCACAAACCGCTATTGGAGCGGCACTGGCACCCGAGTGTACAAGCGTCAGCATCCCTGCTGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp GCCACAGGGACTCCCAGTTGGTCTTCCTGCCTCTACTaGCGCCCCCGTTGCTCTATTCCAACAGGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: ATGTPSWSSCLY*RPRCSIPTGKV
Trigger: CACTTTCCCTGTTGGAATAGAGCAACGGGGGCGGCAGTAGAGGCAGGAAGACCAACTGGGAGTCCCTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp ATCATGCCGCATTCCCTGCCCCAGACCTTCACCTGGTaGCTGCCTCAGGTTCTTCAGGACTCAGGGGAGATG +
Preference number: 6 (lower is better)
Translates to: IMPHSLPQTFTW*LPQVLQDSGEM
Trigger: CATCTCCCCTGAGTCCTGAAGAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 90 bp TTCACCTTGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCTGCCTaGTTTTCCACTGGGTGCCCGGCTCTGGGAAAGGGCCTGATGTGT +
Preference number: 6 (lower is better)
Translates to: FTLDVNFREAGPSPA*FSTGCPALGKGLMC
Trigger: ACACATCAGGCCCTTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp AGCAGGGATGCTGACGCTTGTACACTCGGGTGCCAGTaGCGCTCCAATAGCGGTTTGTGCCCTACTGTGTCA +
Preference number: 6 (lower is better)
Translates to: SRDADACTLGCQ*RSNSGLCPTVS
Trigger: TGACACAGTAGGGCACAAACCGCTATTGGAGCGGCACTGGCACCCGAGTGTACAAGCGTCAGCATCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp CTTGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCTaGCTTGTTTTCCACTGGGTGCCCGGCTCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: LGCELQGSRAVT*LVFHWVPGSGK
Trigger: TTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp CCAGGACTTGGGCCTCTTAAAGGACCTACCCAGCATTaGGTAGGACTTAGAGTGGCCGTCACCAGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: PGLGPLKGPTQH*VGLRVAVTSGR
Trigger: CCTGCCACTGGTGACGGCCACTCTAAGTCCTACCCAATGCTGGGTAGGTCCTTTAAGAGGCCCAAGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp CACCTGACCAATGTGGCACCTCAAGCCAGTCCCGCCTaGTCACATTTCCCTGTTGGGTGGTCCTTGTGGTTC +
Preference number: 6 (lower is better)
Translates to: HLTNVAPQASPA*SHFPVGWSLWF
Trigger: GAACCACAAGGACCACCCAACAGGGAAATGTGATCAGGCGGGACTGGCTTGAGGTGCCACATTGGTCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp GAGATGTTGTCTCCTCAGATGCCTTCTGGGACCACCTaGCCAATGTGGCACCTCAAGCCAGTCCCGCCTGAT +
Preference number: 6 (lower is better)
Translates to: EMLSPQMPSGTT*PMWHLKPVPPD
Trigger: ATCAGGCGGGACTGGCTTGAGGTGCCACATTGGTCAGGTGGTCCCAGAAGGCATCTGAGGAGACAACATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp TGCCGCCCCCGTTGCTCTATTCCAACAGGGAAAGTGTaGCCTCGTAAGTCCTGCTCATCCCCTCCCAGGATT +
Preference number: 6 (lower is better)
Translates to: CRPRCSIPTGKV*PRKSCSSPPRI
Trigger: AATCCTGGGAGGGGATGAGCAGGACTTACGAGGTCACACTTTCCCTGTTGGAATAGAGCAACGGGGGCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp GAGCCCCAAGGAAGGCAGGAGGGCCAATATCTGATCTaGAGGGGTCCTCAGATCAGAAGGCTGCTTCTATGC +
Preference number: 6 (lower is better)
Translates to: EPQGRQEGQYLI*RGPQIRRLLLC
Trigger: GCATAGAAGCAGCCTTCTGATCTGAGGACCCCTGCAGATCAGATATTGGCCCTCCTGCCTTCCTTGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379204.2
ENST00000595326.1
ENST00000601241.6
CDS GCA 72 bp TCCACATCCTCTCCCCATATTCAATTCAACAGCAGGTaGTGTCAGTGCTGCCCCAGCCTCTGTCTCCCTCGT +
Preference number: 6 (lower is better)
Translates to: STSSPHIQFNSR*CQCCPSLCLPR
Trigger: ACGAGGGAGACAGAGGCTGGGGCAGCACTGACAGCACCTGCTGTTGAATTGAATATGGGGAGAGGATGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp GGATGTGGGAAACTTATCCAGGCCAGCATGGGACTCTaGATCTTTGCCCTAAACCTGCTCCTCCCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: GCGKLIQASMGL*IFALNLLLPRL
Trigger: AAGCCTGGGGAGGAGCAGGTTTAGGGCAAAGATCCAGAGTCCCATGCTGGCCTGGATAAGTTTCCCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp CCCCCACATTCCAGTTGTAAAGTTGAGTGGATGAGTTaGCAGTTGGACTGGCAGACGCTGAAGCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: PPHSSCKVEWMS*QLDWQTLKQGL
Trigger: CAGCCCCTGCTTCAGCGTCTGCCAGTCCAACTGTCAACTCATCCACTCAACTTTACAACTGGAATGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp GAGAAGACAGCGGGTCTTGCTCTGAGCATGGGAACATaGTGGCAATTAGGAGGCTTTCCTCCTCAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: EKTAGLALSMGT*WQLGGFPPQRP
Trigger: AGGCCTCTGAGGAGGAAAGCCTCCTAATTGCCATCATGTTCCCATGCTCAGAGCAAGACCCGCTGTCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp TTCTTGAGCTTTGCAACCCCCTCTTCACCTTGGATGTaGACTTCAGGGAAGCAGGGCCGTCACCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: FLSFATPSSPWM*TSGKQGRHLPC
Trigger: ACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp TTCTTCAGGACTCAGGGGAGATGTTGTCTCCTCAGATaGCTTCTGGGACCACCTGACCAATGTGGCACCTCA +
Preference number: 6 (lower is better)
Translates to: FFRTQGRCCLLR*LLGPPDQCGTS
Trigger: TGAGGTGCCACATTGGTCAGGTGGTCCCAGAAGGCATCTGAGGAGACAACATCTCCCCTGAGTCCTGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp AACACAACAAATCCTTTCTCATCATGCCGCATTCCCTaGCCCAGACCTTCACCTGGTGGCTGCCTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: NTTNPFSSCRIP*PRPSPGGCLRF
Trigger: GAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTTGTTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp GGCCATTTCTCCAACACAACAAATCCTTTCTCATCATaGCGCATTCCCTGCCCCAGACCTTCACCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: GHFSNTTNPFSS*RIPCPRPSPGG
Trigger: GCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTTGTTGTGTTGGAGAAATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp GAAACTTATCCAGGCCAGCATGGGACTCTGGATCTTTaGCCTAAACCTGCTCCTCCCCAGGCTTCACCTTCT +
Preference number: 6 (lower is better)
Translates to: ETYPGQHGTLDL*PKPAPPQASPS
Trigger: AGAAGGTGAAGCCTGGGGAGGAGCAGGTTTAGGGCAAAGATCCAGAGTCCCATGCTGGCCTGGATAAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp GCTGCTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTaGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAAGCT +
Preference number: 6 (lower is better)
Translates to: AACYVSGIGSFW*VPGLAGFRSEA
Trigger: AGCTTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp TGGTGTCCTCACTGCTGCTTGTTATGTGTCCGGAATTaGTTCCTTCTGGTGGGTTCCTGGTCTGGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: WCPHCCLLCVRN*FLLVGSWSGWL
Trigger: AAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp AGCTCTCAAAGATCCAGGGAGAAAGAAGATCCAGGCTaGTATTCCCATGGAAGGGGAGTGAGGCTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: SSQRSREKEDPG*YSHGRGVRLEA
Trigger: TGCCTCCAGCCTCACTCCCCTTCCATGGGAATACCAGCCTGGATCTTCTTTCTCCCTGGATCTTTGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 72 bp TTGGTGTCCTCACTGCTGCTTGTTATGTGTCCGGAATaGGTTCCTTCTGGTGGGTTCCTGGTCTGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: LVSSLLLVMCPE*VPSGGFLVWLA
Trigger: AGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 90 bp TCTGTGTCTTTGGTGTCCTCACTGCTGCTTGTTATGTGTCCGGAATaGGTTCCTTCTGGTGGGTTCCTGGTCTGGCTGGCTTCAGGAGTG +
Preference number: 6 (lower is better)
Translates to: SVSLVSSLLLVMCPE*VPSGGFLVWLASGV
Trigger: CACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 90 bp CTGCCTCTGCATCTGGGTCTGTGTCTTTGGTGTCCTCACTGCTGCTaGTTATGTGTCCGGAATTGGTTCCTTCTGGTGGGTTCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: LPLHLGLCLWCPHCC*LCVRNWFLLVGSWS
Trigger: AGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGACCCAGATGCAGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp ACTGCTGCTTGTTATGTGTCCGGAATTGGTTCCTTCTaGTGGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAA +
Preference number: 6 (lower is better)
Translates to: TAACYVSGIGSF*WVPGLAGFRSE
Trigger: TTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp ACTAGAGCGTCTCACACCCCCTGTGTCCCGTCCTCCTaGATAGCTAATGGATGTCTTGGATGTGGGAAACTT +
Preference number: 6 (lower is better)
Translates to: TRASHTPCVPSS*IANGCLGCGKL
Trigger: AAGTTTCCCACATCCAAGACATCCATTAGCTATCCAGGAGGACGGGACACAGGGGGTGTGAGACGCTCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 72 bp CCCAGGGCTAGCCCTTTCTTAGAGATGGCAAAAGCCTaGACCCAGAGCACCTCTCTCATATACAGCCAACCA +
Preference number: 6 (lower is better)
Translates to: PRASPFLEMAKA*TQSTSLIYSQP
Trigger: TGGTTGGCTGTATATGAGAGAGGTGCTCTGGGTCAAGGCTTTTGCCATCTCTAAGAAAGGGCTAGCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595326.1
CDS TCA 72 bp TGCCCTGCTGAAGGTGGGTCTGCACTTGTAGGGAAATaGGCTCTCAAAGATCCAGGGAGAAAGAAGATCCAG +
Preference number: 6 (lower is better)
Translates to: CPAEGGSALVGK*ALKDPGRKKIQ
Trigger: CTGGATCTTCTTTCTCCCTGGATCTTTGAGAGCTCATTTCCCTACAAGTGCAGACCCACCTTCAGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp CTGCATCTGGGTCTGTGTCTTTGGTGTCCTCACTGCTaGTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTG +
Preference number: 6 (lower is better)
Translates to: LHLGLCLWCPHC*LLCVRNWFLLV
Trigger: CACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGACCCAGATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp CCTGAGCACAGTGTTTACAGAGAAGACAGCGGGTCTTaGTCTGAGCATGGGAACATGATGGCAATTAGGAGG +
Preference number: 6 (lower is better)
Translates to: PEHSVYREDSGS*SEHGNMMAIRR
Trigger: CCTCCTAATTGCCATCATGTTCCCATGCTCAGAGCAAGACCCGCTGTCTTCTCTGTAAACACTGTGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp CGTAAGTCCTGCTCATCCCCTCCCAGGATTTTTCACTaGACATGGAAAGGATCCACCTTTCTGCAAGGTCCT +
Preference number: 6 (lower is better)
Translates to: RKSCSSPPRIFH*TWKGSTFLQGP
Trigger: AGGACCTTGCAGAAAGGTGGATCCTTTCCATGTGCAGTGAAAAATCCTGGGAGGGGATGAGCAGGACTTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 72 bp CATCTGGGTCTGTGTCTTTGGTGTCCTCACTGCTGCTaGTTATGTGTCCGGAATTGGTTCCTTCTGGTGGGT +
Preference number: 6 (lower is better)
Translates to: HLGLCLWCPHCC*LCVRNWFLLVG
Trigger: ACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGACCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp GATGTAGCAAGTGTGTTAGGGACACATGTGACACAGTaGAGGGATCCTACATGTTGGGGACCAGCCTCAACA +
Preference number: 6 (lower is better)
Translates to: DVASVLGTHVTQ*RDPTCWGPAST
Trigger: TGTTGAGGCTGGTCCCCAACATGTAGGATCCCTTCACTGTGTCACATGTGTCCCTAACACACTTGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp GTGCAAAATGTGGAGGCTGCAAAAGGTGCCGAGCTCTaGTCTCCACACTATTTATTGAGTACAGTCCCTTCG +
Preference number: 6 (lower is better)
Translates to: VQNVEAAKGAEL*SPHYLLSTVPS
Trigger: CGAAGGGACTGTACTCAATAAATAGTGTGGAGACCAGAGCTCGGCACCTTTTGCAGCCTCCACATTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 72 bp TACAATTTTCTTGAGCTTTGCAACCCCCTCTTCACCTaGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCT +
Preference number: 6 (lower is better)
Translates to: YNFLELCNPLFT*DVNFREAGPSP
Trigger: AGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp ACCTCAAGCCAGTCCCGCCTGATCACATTTCCCTGTTaGGTGGTCCTTGTGGTTCTCATCACTATTACAATT +
Preference number: 6 (lower is better)
Translates to: TSSQSRLITFPC*VVLVVLITITI
Trigger: AATTGTAATAGTGATGAGAACCACAAGGACCACCCAACAGGGAAATGTGATCAGGCGGGACTGGCTTGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 90 bp CATCACTATTACAATTTTCTTGAGCTTTGCAACCCCCTCTTCACCTaGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCTGCCTTGTTT +
Preference number: 6 (lower is better)
Translates to: HHYYNFLELCNPLFT*DVNFREAGPSPALF
Trigger: AAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTAATAGTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 90 bp ATCACATCCAGCCAGCTGCTCCAGCCCAAATGTGATGAGATCATTTaGATTCCCCTTCTCTCCACATCCTCTCCCCATATTCAATTCAAC +
Preference number: 6 (lower is better)
Translates to: ITSSQLLQPKCDEII*IPLLSTSSPHIQFN
Trigger: GTTGAATTGAATATGGGGAGAGGATGTGGAGAGAAGGGGAATCAAAATGATCTCATCACATTTGGGCTGGAGCAGCTGGCTGGATGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp ACAAATGCCATGGTAAGGTTCAGAAGTTACCCTGTATaGTTCAAAAAGCTGGGAAGCCCTCAGCTCCGAGAA +
Preference number: 6 (lower is better)
Translates to: TNAMVRFRSYPV*FKKLGSPQLRE
Trigger: TTCTCGGAGCTGAGGGCTTCCCAGCTTTTTGAACCATACAGGGTAACTTCTGAACCTTACCATGGCATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp TCTCCTTTGTGCTCAAACAGCATAACTTTAACTTGTTaGAGAGTAGCTAGTAGGAGCGGCCTTGACTGGGAG +
Preference number: 6 (lower is better)
Translates to: SPLCSNSITLTC*RVASRSGLDWE
Trigger: CTCCCAGTCAAGGCCGCTCCTACTAGCTACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 90 bp GAAAGTAAACAACCCAAATATACACAAACAGTAGACTGCTCTGGCTaGCATACAGAGAGGTCCATTGCCCTTTTGGGTGGGCCTAAGAAG +
Preference number: 6 (lower is better)
Translates to: ESKQPKYTQTVDCSG*HTERSIALLGGPKK
Trigger: CTTCTTAGGCCCACCCAAAAGGGCAATGGACCTCTCTGTATGCAAGCCAGAGCAGTCTACTGTTTGTGTATATTTGGGTTGTTTACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp GTTCAAAAAGCTGGGAAGCCCTCAGCTCCGAGAAATTaGAATTGCCCACCTCTTTCCTGGAAAACTCATGAA +
Preference number: 6 (lower is better)
Translates to: VQKAGKPSAPRN*NCPPLSWKTHE
Trigger: TTCATGAGTTTTCCAGGAAAGAGGTGGGCAATTTCAATTTCTCGGAGCTGAGGGCTTCCCAGCTTTTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp CTCAACACTACCCGTAGGGTACCCGAAGTCTGGTGGTaGCAAAGGATTGAGAAAAGACAAGTTAAGAGTGAA +
Preference number: 6 (lower is better)
Translates to: LNTTRRVPEVWW*QRIEKRQVKSE
Trigger: TTCACTCTTAACTTGTCTTTTCTCAATCCTTTGTCACCACCAGACTTCGGGTACCCTACGGGTAGTGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp GTGCTGTTTGGTCCGTTTTTACAGAGTGCTGACTGGTaGATTTACAAACCTTTAGCTAGACACAGAGCACTG +
Preference number: 6 (lower is better)
Translates to: VLFGPFLQSADW*IYKPLARHRAL
Trigger: CAGTGCTCTGTGTCTAGCTAAAGGTTTGTAAATGCACCAGTCAGCACTCTGTAAAAACGGACCAAACAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp TGGTCCTTGTGGTTCTCATCACTATTACAATTTTCTTaGGCTTTGCAACCCCCTCTTCACCTTGGATGTGAA +
Preference number: 6 (lower is better)
Translates to: WSLWFSSLLQFS*ALQPPLHLGCE
Trigger: TTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTAATAGTGATGAGAACCACAAGGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp AGAGAAACGCTCATCAGTGCCATGGCAATTTACAAATaGCATGGTAAGGTTCAGAAGTTACCCTGTATGGTT +
Preference number: 6 (lower is better)
Translates to: RETLISAMAIYK*HGKVQKLPCMV
Trigger: AACCATACAGGGTAACTTCTGAACCTTACCATGGCATTTGTAAATTGCCATGGCACTGATGAGCGTTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CCA 72 bp CATCCTGCTGATTTGTCCATTTTACAGAGCGCTGATTaGTCTATTTTACAGAGTGCTGTTTGGTCCGTTTTT +
Preference number: 6 (lower is better)
Translates to: HPADLSILQSAD*SILQSAVWSVF
Trigger: AAAAACGGACCAAACAGCACTCTGTAAAATAGACCAATCAGCGCTCTGTAAAATGGACAAATCAGCAGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS TCA 72 bp AAATTGAAATTGCCCACCTCTTTCCTGGAAAACTCATaGATAATCCACCCTTGTTTAGCACATCATCAAGCA +
Preference number: 6 (lower is better)
Translates to: KLKLPTSFLENS*IIHPCLAHHQA
Trigger: TGCTTGATGATGTGCTAAACAAGGGTGGATTATTCATGAGTTTTCCAGGAAAGAGGTGGGCAATTTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS CAA 90 bp ATCACAGGCATAATCTATAGCAATAGCAGTTTAAATGAGTCTCCTTaGTGCTCAAACAGCATAACTTTAACTTGTTGGAGAGTAGCTAGT +
Preference number: 6 (lower is better)
Translates to: ITGIIYSNSSLNESP*CSNSITLTCWRVAS
Trigger: ACTAGCTACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGACTCATTTAAACTGCTATTGCTATAGATTATGCCTGTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6
CDS GCA 72 bp ATCTATAGCAATAGCAGTTTAAATGAGTCTCCTTTGTaGTCAAACAGCATAACTTTAACTTGTTGGAGAGTA +
Preference number: 6 (lower is better)
Translates to: IYSNSSLNESPL*SNSITLTCWRV
Trigger: TACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGACTCATTTAAACTGCTATTGCTATAGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601241.6