Pregenerated sensors for SCGB2B2 (Homo sapiens)
Ensembl gene IDs: ENSG00000205209Ensembl transcript IDs: ENST00000379204.2, ENST00000595326.1, ENST00000601241.5, ENST00000601241.6
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | GTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCCCAAGGAAGAGGAGGGCCAATATCTaGTCTGCAGGGGTCCTCAGA | + |
Preference number: 2 (lower is better) Translates to: VSVVMNRARPGTRGAPRKRRANI*SAGVLR Trigger: TCTGAGGACCCCTGCAGATCAGATATTGGCCCTCCT...CTTCCTTGGGGCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379204.2 ENST00000601241.5 |
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3UTR-3UTR TCA 90 bp | GTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCAGGAGGGCCAATATCTaGTCTGCAGGGGTCCTCAGA | + |
Preference number: 2 (lower is better) Translates to: VHWGLCSDEQSQARNAGSRRANI*SAGVLR Trigger: TCTGAGGACCCCTGCAGATCAGATATTGGCCCTCCT...GCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379204.2 ENST00000601241.5 |
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CDS-3UTR TCA 90 bp | TTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCAGGAGGGCCAATATCTaGTCTGCAGGGGTCCTCAGA | + |
Preference number: 4 (lower is better) Translates to: FIGVSVVMNRARPGTRGARRANI*SAGVLR Trigger: TCTGAGGACCCCTGCAGATCAGATATTGGCCCTCCT...GGCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS-3UTR GCA 90 bp | GTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCCCAAGGAAGGGCCAATATCTGATCTaGAGGGGTCCTCAGATCAGA | + |
Preference number: 4 (lower is better) Translates to: VSVVMNRARPGTRGAPRKGQYLI*RGPQIR Trigger: TCTGATCTGAGGACCCCTGCAGATCAGATATTGGCC...CTTCCTTGGGGCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS-3UTR CCA 90 bp | GTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCTGTCACGGAGACATTaGCAAAGCATTGCTGGACAT | + |
Preference number: 4 (lower is better) Translates to: VHWGLCSDEQSQARNAGSLSRRH*QSIAGH Trigger: ATGTCCAGCAATGCTTTGCCAATGTCTCCGTGACAG...GCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS-3UTR CCA 90 bp | GGTGTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGGCTGCAGGTGTTCATTaGGGTCTCTGTAGTGATGAA | + |
Preference number: 4 (lower is better) Translates to: GVHWGLCSDEQSQARNAGAAGVH*GLCSDE Trigger: TTCATCACTACAGAGACCCCAATGAACACCTGCAGC...CCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS-3UTR GCA 90 bp | GTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCAGAAGGCTGCTTCTATaGAATCGTTGCTCTGAAGGA | + |
Preference number: 4 (lower is better) Translates to: VHWGLCSDEQSQARNAGSRRLLL*NRCSEG Trigger: TCCTTCAGAGCAACGATTGCATAGAAGCAGCCTTCT...GCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS-3UTR GCA 90 bp | GTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCTCAGATCAGAAGGCTaGTTCTATGCAATCGTTGCT | + |
Preference number: 4 (lower is better) Translates to: VHWGLCSDEQSQARNAGSLRSEG*FYAIVA Trigger: AGCAACGATTGCATAGAAGCAGCCTTCTGATCTGAG...GCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS-3UTR GCA 90 bp | GCAGGTGTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGACATTGGCAAAGCATTaGTGGACATTGAGGAAGGAC | + |
Preference number: 4 (lower is better) Translates to: AGVHWGLCSDEQSQARNATLAKH*WTLRKD Trigger: GTCCTTCCTCAATGTCCAGCAATGCTTTGCCAATGT...CGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAACACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS-3UTR CCA 90 bp | CAGGTGTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGTCCTTCAGGAGGTCTTaGGACACATCAAACACAACA | + |
Preference number: 4 (lower is better) Translates to: QVFIGVSVVMNRARPGTRSFRRS*DTSNTT Trigger: TGTTGTGTTTGATGTGTCCCAAGACCTCCTGAAGGA...CCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAACACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS-3UTR TCA 90 bp | GTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGAGCCCCAAGGAAGATGCAATCGTTGCTCTaGAGGATCTTCTTAATAACA | + |
Preference number: 4 (lower is better) Translates to: VSVVMNRARPGTRGAPRKMQSLL*RIFLIT Trigger: TGTTATTAAGAAGATCCTTCAGAGCAACGATTGCAT...CTTCCTTGGGGCTCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS TCA 90 bp | CTGCCCCAGCCTCTGTCTCCCTCGTGTCTCTCCAGGGCTGCACTGTaGCAAGGCCACGGTGTCTACCTGGACGGCCACAGGGACTCCCAG | + |
Preference number: 5 (lower is better) Translates to: LPQPLSPSCLSRAAL*QGHGVYLDGHRDSQ Trigger: CTGGGAGTCCCTGTGGCCGTCCAGGTAGACACCGTGGCCTTGTCACAGTGCAGCCCTGGAGAGACACGAGGGAGACAGAGGCTGGGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 90 bp | GGTTTGTGCCCTACTGTGTCAAGGGAGGGTCTGGCTAGGAGCACCTaGGGGACACGCCCGGTGCAGAGGACACTCACTGGGCTGCTGAGA | + |
Preference number: 5 (lower is better) Translates to: GLCPTVSREGLARST*GTRPVQRTLTGLLR Trigger: TCTCAGCAGCCCAGTGAGTGTCCTCTGCACCGGGCGTGTCCCTCAGGTGCTCCTAGCCAGACCCTCCCTTGACACAGTAGGGCACAAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | GCCGCTCCAATAGCGGTTTGTGCCCTACTGTGTCAAGGGAGGGTCTaGCTAGGAGCACCTGAGGGACACGCCCGGTGCAGAGGACACTCA | + |
Preference number: 5 (lower is better) Translates to: AAPIAVCALLCQGRV*LGAPEGHARCRGHS Trigger: TGAGTGTCCTCTGCACCGGGCGTGTCCCTCAGGTGCTCCTAGCCAGACCCTCCCTTGACACAGTAGGGCACAAACCGCTATTGGAGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | CGTGTCTCTCCAGGGCTGCACTGTGACAAGGCCACGGTGTCTACCTaGACGGCCACAGGGACTCCCAGTTGGTCTTCCTGCCTCTACTGC | + |
Preference number: 5 (lower is better) Translates to: RVSPGLHCDKATVST*TATGTPSWSSCLYC Trigger: GCAGTAGAGGCAGGAAGACCAACTGGGAGTCCCTGTGGCCGTCCAGGTAGACACCGTGGCCTTGTCACAGTGCAGCCCTGGAGAGACACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | GGGGAAGGCAGCAGGGATGCTGACGCTTGTACACTCGGGTGCCAGTaGCGCTCCAATAGCGGTTTGTGCCCTACTGTGTCAAGGGAGGGT | + |
Preference number: 5 (lower is better) Translates to: GEGSRDADACTLGCQ*RSNSGLCPTVSREG Trigger: ACCCTCCCTTGACACAGTAGGGCACAAACCGCTATTGGAGCGGCACTGGCACCCGAGTGTACAAGCGTCAGCATCCCTGCTGCCTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 90 bp | TTAGGCTGTGCCACCCAGACTGAGTGGGCTCACCTCGGCCAGGCATaGGCCATCACTGTGCACGTACAGAACCTCATAGTAGCGCCCAGG | + |
Preference number: 5 (lower is better) Translates to: LGCATQTEWAHLGQA*AITVHVQNLIVAPR Trigger: CCTGGGCGCTACTATGAGGTTCTGTACGTGCACAGTGATGGCTCATGCCTGGCCGAGGTGAGCCCACTCAGTCTGGGTGGCACAGCCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | CCTCTTCACCTTGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCTaGCTTGTTTTCCACTGGGTGCCCGGCTCTGGGAAAGGGCCTGAT | + |
Preference number: 5 (lower is better) Translates to: PLHLGCELQGSRAVT*LVFHWVPGSGKGPD Trigger: ATCAGGCCCTTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 90 bp | GACTCAGGGGAGATGTTGTCTCCTCAGATGCCTTCTGGGACCACCTaGCCAATGTGGCACCTCAAGCCAGTCCCGCCTGATCACATTTCC | + |
Preference number: 5 (lower is better) Translates to: DSGEMLSPQMPSGTT*PMWHLKPVPPDHIS Trigger: GGAAATGTGATCAGGCGGGACTGGCTTGAGGTGCCACATTGGTCAGGTGGTCCCAGAAGGCATCTGAGGAGACAACATCTCCCCTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | TGCCTCAGGTTCTTCAGGACTCAGGGGAGATGTTGTCTCCTCAGATaGCTTCTGGGACCACCTGACCAATGTGGCACCTCAAGCCAGTCC | + |
Preference number: 5 (lower is better) Translates to: CLRFFRTQGRCCLLR*LLGPPDQCGTSSQS Trigger: GGACTGGCTTGAGGTGCCACATTGGTCAGGTGGTCCCAGAAGGCATCTGAGGAGACAACATCTCCCCTGAGTCCTGAAGAACCTGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | ACATCCTCTCCCCATATTCAATTCAACAGCAGGTGCTGTCAGTGCTaGCCCAGCCTCTGTCTCCCTCGTGTCTCTCCAGGGCTGCACTGT | + |
Preference number: 5 (lower is better) Translates to: TSSPHIQFNSRCCQC*PSLCLPRVSPGLHC Trigger: ACAGTGCAGCCCTGGAGAGACACGAGGGAGACAGAGGCTGGGGCAGCACTGACAGCACCTGCTGTTGAATTGAATATGGGGAGAGGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | AAGGTAGTGCAGACCCAAAGAGCAAAAGAACAAACATCCCACACCTaGGAAGTAGACCCCAGCGCGGTTGCCGCTGGTTGTTCGGGTGGC | + |
Preference number: 5 (lower is better) Translates to: KVVQTQRAKEQTSHT*EVDPSAVAAGCSGG Trigger: GCCACCCGAACAACCAGCGGCAACCGCGCTGGGGTCTACTTCCCAGGTGTGGGATGTTTGTTCTTTTGCTCTTTGGGTCTGCACTACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | AGGCGGTGCGTCTGGAGTCGTGCTGGAGTTGTTTGTTCCTCCCGGTaGGTTCATGATTTCGCTGGCTTCAGGAGTGAAGCTGCAGACCTT | + |
Preference number: 5 (lower is better) Translates to: RRCVWSRAGVVCSSR*VHDFAGFRSEAADL Trigger: AAGGTCTGCAGCTTCACTCCTGAAGCCAGCGAAATCATGAACCCACCGGGAGGAACAAACAACTCCAGCACGACTCCAGACGCACCGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | TCCTTTCTCATCATGCCGCATTCCCTGCCCCAGACCTTCACCTGGTaGCTGCCTCAGGTTCTTCAGGACTCAGGGGAGATGTTGTCTCCT | + |
Preference number: 5 (lower is better) Translates to: SFLIMPHSLPQTFTW*LPQVLQDSGEMLSP Trigger: AGGAGACAACATCTCCCCTGAGTCCTGAAGAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | AGCTGCACTGGCCATTTCTCCAACACAACAAATCCTTTCTCATCATaGCGCATTCCCTGCCCCAGACCTTCACCTGGTGGCTGCCTCAGG | + |
Preference number: 5 (lower is better) Translates to: SCTGHFSNTTNPFSS*RIPCPRPSPGGCLR Trigger: CCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTTGTTGTGTTGGAGAAATGGCCAGTGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | TGGATGTGGGAAACTTATCCAGGCCAGCATGGGACTCTGGATCTTTaGCCTAAACCTGCTCCTCCCCAGGCTTCACCTTCTCAGCAGTGG | + |
Preference number: 5 (lower is better) Translates to: WMWETYPGQHGTLDL*PKPAPPQASPSQQW Trigger: CCACTGCTGAGAAGGTGAAGCCTGGGGAGGAGCAGGTTTAGGGCAAAGATCCAGAGTCCCATGCTGGCCTGGATAAGTTTCCCACATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | CTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTGGGTTCCTGGTCTaGCTGGCTTCAGGAGTGAAGCTGCAGACCCTCGCGGTGTGTGTT | + |
Preference number: 5 (lower is better) Translates to: LVMCPELVPSGGFLV*LASGVKLQTLAVCV Trigger: AACACACACCGCGAGGGTCTGCAGCTTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | GTCCTCACTGCTGCTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTaGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAAGCTGCAGACCCT | + |
Preference number: 5 (lower is better) Translates to: VLTAACYVSGIGSFW*VPGLAGFRSEAADP Trigger: AGGGTCTGCAGCTTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | GGTGTCCTCACTGCTGCTTGTTATGTGTCCGGAATTGGTTCCTTCTaGTGGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAAGCTGCAGAC | + |
Preference number: 5 (lower is better) Translates to: GVLTAACYVSGIGSF*WVPGLAGFRSEAAD Trigger: GTCTGCAGCTTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 90 bp | TTCTGGGACCACCTGACCAATGTGGCACCTCAAGCCAGTCCCGCCTaGTCACATTTCCCTGTTGGGTGGTCCTTGTGGTTCTCATCACTA | + |
Preference number: 5 (lower is better) Translates to: FWDHLTNVAPQASPA*SHFPVGWSLWFSSL Trigger: TAGTGATGAGAACCACAAGGACCACCCAACAGGGAAATGTGATCAGGCGGGACTGGCTTGAGGTGCCACATTGGTCAGGTGGTCCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | CCTCTGCCTCTGCATCTGGGTCTGTGTCTTTGGTGTCCTCACTGCTaGTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTGGGTTCCTGG | + |
Preference number: 5 (lower is better) Translates to: PLPLHLGLCLWCPHC*LLCVRNWFLLVGSW Trigger: CCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGACCCAGATGCAGAGGCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | AAATCCTTTCTCATCATGCCGCATTCCCTGCCCCAGACCTTCACCTaGTGGCTGCCTCAGGTTCTTCAGGACTCAGGGGAGATGTTGTCT | + |
Preference number: 5 (lower is better) Translates to: KSFLIMPHSLPQTFT*WLPQVLQDSGEMLS Trigger: AGACAACATCTCCCCTGAGTCCTGAAGAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | GAGCTCCAAACTAGAGCGTCTCACACCCCCTGTGTCCCGTCCTCCTaGATAGCTAATGGATGTCTTGGATGTGGGAAACTTATCCAGGCC | + |
Preference number: 5 (lower is better) Translates to: ELQTRASHTPCVPSS*IANGCLGCGKLIQA Trigger: GGCCTGGATAAGTTTCCCACATCCAAGACATCCATTAGCTATCCAGGAGGACGGGACACAGGGGGTGTGAGACGCTCTAGTTTGGAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS-3UTR CAA 90 bp | GTGTTCATTGGGGTCTCTGTAGTGATGAACAGAGCCAGGCCAGGAACGCGGGGACTCCTTCAGGAGGTCTaGGGACACATCAAACACAAC | + |
Preference number: 5 (lower is better) Translates to: VFIGVSVVMNRARPGTRGLLQEV*GHIKHN Trigger: GTTGTGTTTGATGTGTCCCAAGACCTCCTGAAGGAG...TCCCCGCGTTCCTGGCCTGGCTCTGTTCATCACTACAGAGACCCCAATGAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379204.2 |
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CDS TCA 90 bp | AGCCGTGTGTGCCCTGCTGAAGGTGGGTCTGCACTTGTAGGGAAATaGGCTCTCAAAGATCCAGGGAGAAAGAAGATCCAGGCTGGTATT | + |
Preference number: 5 (lower is better) Translates to: SRVCPAEGGSALVGK*ALKDPGRKKIQAGI Trigger: AATACCAGCCTGGATCTTCTTTCTCCCTGGATCTTTGAGAGCTCATTTCCCTACAAGTGCAGACCCACCTTCAGCAGGGCACACACGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | CATTTCTCCAACACAACAAATCCTTTCTCATCATGCCGCATTCCCTaGCCCAGACCTTCACCTGGTGGCTGCCTCAGGTTCTTCAGGACT | + |
Preference number: 5 (lower is better) Translates to: HFSNTTNPFSSCRIP*PRPSPGGCLRFFRT Trigger: AGTCCTGAAGAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTTGTTGTGTTGGAGAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 90 bp | GTGTTTACAGAGAAGACAGCGGGTCTTGCTCTGAGCATGGGAACATaGTGGCAATTAGGAGGCTTTCCTCCTCAGAGGCCTTTTGTGGCT | + |
Preference number: 5 (lower is better) Translates to: VFTEKTAGLALSMGT*WQLGGFPPQRPFVA Trigger: AGCCACAAAAGGCCTCTGAGGAGGAAAGCCTCCTAATTGCCATCATGTTCCCATGCTCAGAGCAAGACCCGCTGTCTTCTCTGTAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | GTCTTTCTCCCTGAGCACAGTGTTTACAGAGAAGACAGCGGGTCTTaGTCTGAGCATGGGAACATGATGGCAATTAGGAGGCTTTCCTCC | + |
Preference number: 5 (lower is better) Translates to: VFLPEHSVYREDSGS*SEHGNMMAIRRLSS Trigger: GGAGGAAAGCCTCCTAATTGCCATCATGTTCCCATGCTCAGAGCAAGACCCGCTGTCTTCTCTGTAAACACTGTGCTCAGGGAGAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | TCGTTTTCTGACGTGACCTCCTTCCCTGCTGCCCCTTGTTCCAGCTaGACTGGCCATTTCTCCAACACAACAAATCCTTTCTCATCATGC | + |
Preference number: 5 (lower is better) Translates to: SFSDVTSFPAAPCSS*TGHFSNTTNPFSSC Trigger: GCATGATGAGAAAGGATTTGTTGTGTTGGAGAAATGGCCAGTGCAGCTGGAACAAGGGGCAGCAGGGAAGGAGGTCACGTCAGAAAACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | CAATGTGGCACCTCAAGCCAGTCCCGCCTGATCACATTTCCCTGTTaGGTGGTCCTTGTGGTTCTCATCACTATTACAATTTTCTTGAGC | + |
Preference number: 5 (lower is better) Translates to: QCGTSSQSRLITFPC*VVLVVLITITIFLS Trigger: GCTCAAGAAAATTGTAATAGTGATGAGAACCACAAGGACCACCCAACAGGGAAATGTGATCAGGCGGGACTGGCTTGAGGTGCCACATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | GGTGGTCCTTGTGGTTCTCATCACTATTACAATTTTCTTGAGCTTTaGAACCCCCTCTTCACCTTGGATGTGAACTTCAGGGAAGCAGGG | + |
Preference number: 5 (lower is better) Translates to: GGPCGSHHYYNFLEL*NPLFTLDVNFREAG Trigger: CCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTAATAGTGATGAGAACCACAAGGACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 90 bp | CCTGTTGGGTGGTCCTTGTGGTTCTCATCACTATTACAATTTTCTTaGGCTTTGCAACCCCCTCTTCACCTTGGATGTGAACTTCAGGGA | + |
Preference number: 5 (lower is better) Translates to: PVGWSLWFSSLLQFS*ALQPPLHLGCELQG Trigger: TCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTAATAGTGATGAGAACCACAAGGACCACCCAACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | TTAAATGAGTCTCCTTTGTGCTCAAACAGCATAACTTTAACTTGTTaGAGAGTAGCTAGTAGGAGCGGCCTTGACTGGGAGCCTGCACGT | + |
Preference number: 5 (lower is better) Translates to: LNESPLCSNSITLTC*RVASRSGLDWEPAR Trigger: ACGTGCAGGCTCCCAGTCAAGGCCGCTCCTACTAGCTACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGACTCATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | CAATATCTGATCTGCAGGGGTCCTCAGATCAGAAGGCTGCTTCTATaGAATCGTTGCTCTGAAGGATCTTCTTCGTATTTTCTTCATCTT | + |
Preference number: 5 (lower is better) Translates to: QYLICRGPQIRRLLL*NRCSEGSSSYFLHL Trigger: AAGATGAAGAAAATACGAAGAAGATCCTTCAGAGCAACGATTGCATAGAAGCAGCCTTCTGATCTGAGGACCCCTGCAGATCAGATATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000595326.1 |
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CDS GCA 90 bp | AGCACGCTAAGAGAAACGCTCATCAGTGCCATGGCAATTTACAAATaGCATGGTAAGGTTCAGAAGTTACCCTGTATGGTTCAAAAAGCT | + |
Preference number: 5 (lower is better) Translates to: STLRETLISAMAIYK*HGKVQKLPCMVQKA Trigger: AGCTTTTTGAACCATACAGGGTAACTTCTGAACCTTACCATGGCATTTGTAAATTGCCATGGCACTGATGAGCGTTTCTCTTAGCGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | TTTTACAGAGTGCTGTTTGGTCCGTTTTTACAGAGTGCTGACTGGTaGATTTACAAACCTTTAGCTAGACACAGAGCACTGATTGGTGTA | + |
Preference number: 5 (lower is better) Translates to: FYRVLFGPFLQSADW*IYKPLARHRALIGV Trigger: TACACCAATCAGTGCTCTGTGTCTAGCTAAAGGTTTGTAAATGCACCAGTCAGCACTCTGTAAAAACGGACCAAACAGCACTCTGTAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | TGGCAATTTACAAATGCCATGGTAAGGTTCAGAAGTTACCCTGTATaGTTCAAAAAGCTGGGAAGCCCTCAGCTCCGAGAAATTGAAATT | + |
Preference number: 5 (lower is better) Translates to: WQFTNAMVRFRSYPV*FKKLGSPQLREIEI Trigger: AATTTCAATTTCTCGGAGCTGAGGGCTTCCCAGCTTTTTGAACCATACAGGGTAACTTCTGAACCTTACCATGGCATTTGTAAATTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 90 bp | CTATTTTACAGAGTGCTGTTTGGTCCGTTTTTACAGAGTGCTGACTaGTGCATTTACAAACCTTTAGCTAGACACAGAGCACTGATTGGT | + |
Preference number: 5 (lower is better) Translates to: LFYRVLFGPFLQSAD*CIYKPLARHRALIG Trigger: ACCAATCAGTGCTCTGTGTCTAGCTAAAGGTTTGTAAATGCACCAGTCAGCACTCTGTAAAAACGGACCAAACAGCACTCTGTAAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 90 bp | TGCTCTGAAGGATCTTCTTCGTATTTTCTTCATCTTTTCACTTGTTaGTGGACACTGAGGTTGAGTCAAATCTTGGCTGTGAATAGTGTG | + |
Preference number: 5 (lower is better) Translates to: CSEGSSSYFLHLFTC*WTLRLSQILAVNSV Trigger: CACACTATTCACAGCCAAGATTTGACTCAACCTCAGTGTCCATCAACAAGTGAAAAGATGAAGAAAATACGAAGAAGATCCTTCAGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000595326.1 |
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CDS TCA 90 bp | AGCTCCGAGAAATTGAAATTGCCCACCTCTTTCCTGGAAAACTCATaGATAATCCACCCTTGTTTAGCACATCATCAAGCAATAAATACA | + |
Preference number: 5 (lower is better) Translates to: SSEKLKLPTSFLENS*IIHPCLAHHQAINT Trigger: TGTATTTATTGCTTGATGATGTGCTAAACAAGGGTGGATTATTCATGAGTTTTCCAGGAAAGAGGTGGGCAATTTCAATTTCTCGGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 90 bp | ACAGGCATAATCTATAGCAATAGCAGTTTAAATGAGTCTCCTTTGTaGTCAAACAGCATAACTTTAACTTGTTGGAGAGTAGCTAGTAGG | + |
Preference number: 5 (lower is better) Translates to: TGIIYSNSSLNESPL*SNSITLTCWRVASR Trigger: CCTACTAGCTACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGACTCATTTAAACTGCTATTGCTATAGATTATGCCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | CCTACTGTGTCAAGGGAGGGTCTGGCTAGGAGCACCTaGGGGACACGCCCGGTGCAGAGGACACTCACTGGG | + |
Preference number: 6 (lower is better) Translates to: PTVSREGLARST*GTRPVQRTLTG Trigger: CCCAGTGAGTGTCCTCTGCACCGGGCGTGTCCCTCAGGTGCTCCTAGCCAGACCCTCCCTTGACACAGTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | GAAGCAGGGCCGTCACCTGCCTTGTTTTCCACTGGGTaGCCGGCTCTGGGAAAGGGCCTGATGTGTGGCAGG | + |
Preference number: 6 (lower is better) Translates to: EAGPSPALFSTG*PALGKGLMCGR Trigger: CCTGCCACACATCAGGCCCTTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | CCAGGGCTGCACTGTGACAAGGCCACGGTGTCTACCTaGACGGCCACAGGGACTCCCAGTTGGTCTTCCTGC | + |
Preference number: 6 (lower is better) Translates to: PGLHCDKATVST*TATGTPSWSSC Trigger: GCAGGAAGACCAACTGGGAGTCCCTGTGGCCGTCCAGGTAGACACCGTGGCCTTGTCACAGTGCAGCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | ACACTCGGGTGCCAGTGCCGCTCCAATAGCGGTTTGTaGCCTACTGTGTCAAGGGAGGGTCTGGCTAGGAGC | + |
Preference number: 6 (lower is better) Translates to: TLGCQCRSNSGL*PTVSREGLARS Trigger: GCTCCTAGCCAGACCCTCCCTTGACACAGTAGGGCACAAACCGCTATTGGAGCGGCACTGGCACCCGAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | ATAGCGGTTTGTGCCCTACTGTGTCAAGGGAGGGTCTaGCTAGGAGCACCTGAGGGACACGCCCGGTGCAGA | + |
Preference number: 6 (lower is better) Translates to: IAVCALLCQGRV*LGAPEGHARCR Trigger: TCTGCACCGGGCGTGTCCCTCAGGTGCTCCTAGCCAGACCCTCCCTTGACACAGTAGGGCACAAACCGCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | TGCAAAGATAGGGTGGTCAGCAGTGGAGCCTTGTCCTaGCCAGCCGTGTGTGCCCTGCTGAAGGTGGGTCTG | + |
Preference number: 6 (lower is better) Translates to: CKDRVVSSGALS*PAVCALLKVGL Trigger: CAGACCCACCTTCAGCAGGGCACACACGGCTGGCCAGGACAAGGCTCCACTGCTGACCACCCTATCTTTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 72 bp | GATGTGAACTTCAGGGAAGCAGGGCCGTCACCTGCCTaGTTTTCCACTGGGTGCCCGGCTCTGGGAAAGGGC | + |
Preference number: 6 (lower is better) Translates to: DVNFREAGPSPA*FSTGCPALGKG Trigger: GCCCTTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | GGACACGCCCGGTGCAGAGGACACTCACTGGGCTGCTaGGAGCCATGTAGAACCGCAGAGCAGTTCCTAGAT | + |
Preference number: 6 (lower is better) Translates to: GHARCRGHSLGC*EPCRTAEQFLD Trigger: ATCTAGGAACTGCTCTGCGGTTCTACATGGCTCTCAGCAGCCCAGTGAGTGTCCTCTGCACCGGGCGTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | GAAGGCAGCAGGGATGCTGACGCTTGTACACTCGGGTaGCAGTGCCGCTCCAATAGCGGTTTGTGCCCTACT | + |
Preference number: 6 (lower is better) Translates to: EGSRDADACTLG*QCRSNSGLCPT Trigger: AGTAGGGCACAAACCGCTATTGGAGCGGCACTGGCACCCGAGTGTACAAGCGTCAGCATCCCTGCTGCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | GCCACAGGGACTCCCAGTTGGTCTTCCTGCCTCTACTaGCGCCCCCGTTGCTCTATTCCAACAGGGAAAGTG | + |
Preference number: 6 (lower is better) Translates to: ATGTPSWSSCLY*RPRCSIPTGKV Trigger: CACTTTCCCTGTTGGAATAGAGCAACGGGGGCGGCAGTAGAGGCAGGAAGACCAACTGGGAGTCCCTGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | ATCATGCCGCATTCCCTGCCCCAGACCTTCACCTGGTaGCTGCCTCAGGTTCTTCAGGACTCAGGGGAGATG | + |
Preference number: 6 (lower is better) Translates to: IMPHSLPQTFTW*LPQVLQDSGEM Trigger: CATCTCCCCTGAGTCCTGAAGAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 90 bp | TTCACCTTGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCTGCCTaGTTTTCCACTGGGTGCCCGGCTCTGGGAAAGGGCCTGATGTGT | + |
Preference number: 6 (lower is better) Translates to: FTLDVNFREAGPSPA*FSTGCPALGKGLMC Trigger: ACACATCAGGCCCTTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | AGCAGGGATGCTGACGCTTGTACACTCGGGTGCCAGTaGCGCTCCAATAGCGGTTTGTGCCCTACTGTGTCA | + |
Preference number: 6 (lower is better) Translates to: SRDADACTLGCQ*RSNSGLCPTVS Trigger: TGACACAGTAGGGCACAAACCGCTATTGGAGCGGCACTGGCACCCGAGTGTACAAGCGTCAGCATCCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | CTTGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCTaGCTTGTTTTCCACTGGGTGCCCGGCTCTGGGAAA | + |
Preference number: 6 (lower is better) Translates to: LGCELQGSRAVT*LVFHWVPGSGK Trigger: TTTCCCAGAGCCGGGCACCCAGTGGAAAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | CCAGGACTTGGGCCTCTTAAAGGACCTACCCAGCATTaGGTAGGACTTAGAGTGGCCGTCACCAGTGGCAGG | + |
Preference number: 6 (lower is better) Translates to: PGLGPLKGPTQH*VGLRVAVTSGR Trigger: CCTGCCACTGGTGACGGCCACTCTAAGTCCTACCCAATGCTGGGTAGGTCCTTTAAGAGGCCCAAGTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | CACCTGACCAATGTGGCACCTCAAGCCAGTCCCGCCTaGTCACATTTCCCTGTTGGGTGGTCCTTGTGGTTC | + |
Preference number: 6 (lower is better) Translates to: HLTNVAPQASPA*SHFPVGWSLWF Trigger: GAACCACAAGGACCACCCAACAGGGAAATGTGATCAGGCGGGACTGGCTTGAGGTGCCACATTGGTCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | GAGATGTTGTCTCCTCAGATGCCTTCTGGGACCACCTaGCCAATGTGGCACCTCAAGCCAGTCCCGCCTGAT | + |
Preference number: 6 (lower is better) Translates to: EMLSPQMPSGTT*PMWHLKPVPPD Trigger: ATCAGGCGGGACTGGCTTGAGGTGCCACATTGGTCAGGTGGTCCCAGAAGGCATCTGAGGAGACAACATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | TGCCGCCCCCGTTGCTCTATTCCAACAGGGAAAGTGTaGCCTCGTAAGTCCTGCTCATCCCCTCCCAGGATT | + |
Preference number: 6 (lower is better) Translates to: CRPRCSIPTGKV*PRKSCSSPPRI Trigger: AATCCTGGGAGGGGATGAGCAGGACTTACGAGGTCACACTTTCCCTGTTGGAATAGAGCAACGGGGGCGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | GAGCCCCAAGGAAGGCAGGAGGGCCAATATCTGATCTaGAGGGGTCCTCAGATCAGAAGGCTGCTTCTATGC | + |
Preference number: 6 (lower is better) Translates to: EPQGRQEGQYLI*RGPQIRRLLLC Trigger: GCATAGAAGCAGCCTTCTGATCTGAGGACCCCTGCAGATCAGATATTGGCCCTCCTGCCTTCCTTGGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379204.2 ENST00000595326.1 ENST00000601241.6 |
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CDS GCA 72 bp | TCCACATCCTCTCCCCATATTCAATTCAACAGCAGGTaGTGTCAGTGCTGCCCCAGCCTCTGTCTCCCTCGT | + |
Preference number: 6 (lower is better) Translates to: STSSPHIQFNSR*CQCCPSLCLPR Trigger: ACGAGGGAGACAGAGGCTGGGGCAGCACTGACAGCACCTGCTGTTGAATTGAATATGGGGAGAGGATGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | GGATGTGGGAAACTTATCCAGGCCAGCATGGGACTCTaGATCTTTGCCCTAAACCTGCTCCTCCCCAGGCTT | + |
Preference number: 6 (lower is better) Translates to: GCGKLIQASMGL*IFALNLLLPRL Trigger: AAGCCTGGGGAGGAGCAGGTTTAGGGCAAAGATCCAGAGTCCCATGCTGGCCTGGATAAGTTTCCCACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | CCCCCACATTCCAGTTGTAAAGTTGAGTGGATGAGTTaGCAGTTGGACTGGCAGACGCTGAAGCAGGGGCTG | + |
Preference number: 6 (lower is better) Translates to: PPHSSCKVEWMS*QLDWQTLKQGL Trigger: CAGCCCCTGCTTCAGCGTCTGCCAGTCCAACTGTCAACTCATCCACTCAACTTTACAACTGGAATGTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | GAGAAGACAGCGGGTCTTGCTCTGAGCATGGGAACATaGTGGCAATTAGGAGGCTTTCCTCCTCAGAGGCCT | + |
Preference number: 6 (lower is better) Translates to: EKTAGLALSMGT*WQLGGFPPQRP Trigger: AGGCCTCTGAGGAGGAAAGCCTCCTAATTGCCATCATGTTCCCATGCTCAGAGCAAGACCCGCTGTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | TTCTTGAGCTTTGCAACCCCCTCTTCACCTTGGATGTaGACTTCAGGGAAGCAGGGCCGTCACCTGCCTTGT | + |
Preference number: 6 (lower is better) Translates to: FLSFATPSSPWM*TSGKQGRHLPC Trigger: ACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | TTCTTCAGGACTCAGGGGAGATGTTGTCTCCTCAGATaGCTTCTGGGACCACCTGACCAATGTGGCACCTCA | + |
Preference number: 6 (lower is better) Translates to: FFRTQGRCCLLR*LLGPPDQCGTS Trigger: TGAGGTGCCACATTGGTCAGGTGGTCCCAGAAGGCATCTGAGGAGACAACATCTCCCCTGAGTCCTGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | AACACAACAAATCCTTTCTCATCATGCCGCATTCCCTaGCCCAGACCTTCACCTGGTGGCTGCCTCAGGTTC | + |
Preference number: 6 (lower is better) Translates to: NTTNPFSSCRIP*PRPSPGGCLRF Trigger: GAACCTGAGGCAGCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTTGTTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | GGCCATTTCTCCAACACAACAAATCCTTTCTCATCATaGCGCATTCCCTGCCCCAGACCTTCACCTGGTGGC | + |
Preference number: 6 (lower is better) Translates to: GHFSNTTNPFSS*RIPCPRPSPGG Trigger: GCCACCAGGTGAAGGTCTGGGGCAGGGAATGCGGCATGATGAGAAAGGATTTGTTGTGTTGGAGAAATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | GAAACTTATCCAGGCCAGCATGGGACTCTGGATCTTTaGCCTAAACCTGCTCCTCCCCAGGCTTCACCTTCT | + |
Preference number: 6 (lower is better) Translates to: ETYPGQHGTLDL*PKPAPPQASPS Trigger: AGAAGGTGAAGCCTGGGGAGGAGCAGGTTTAGGGCAAAGATCCAGAGTCCCATGCTGGCCTGGATAAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | GCTGCTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTaGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAAGCT | + |
Preference number: 6 (lower is better) Translates to: AACYVSGIGSFW*VPGLAGFRSEA Trigger: AGCTTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | TGGTGTCCTCACTGCTGCTTGTTATGTGTCCGGAATTaGTTCCTTCTGGTGGGTTCCTGGTCTGGCTGGCTT | + |
Preference number: 6 (lower is better) Translates to: WCPHCCLLCVRN*FLLVGSWSGWL Trigger: AAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | AGCTCTCAAAGATCCAGGGAGAAAGAAGATCCAGGCTaGTATTCCCATGGAAGGGGAGTGAGGCTGGAGGCA | + |
Preference number: 6 (lower is better) Translates to: SSQRSREKEDPG*YSHGRGVRLEA Trigger: TGCCTCCAGCCTCACTCCCCTTCCATGGGAATACCAGCCTGGATCTTCTTTCTCCCTGGATCTTTGAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 72 bp | TTGGTGTCCTCACTGCTGCTTGTTATGTGTCCGGAATaGGTTCCTTCTGGTGGGTTCCTGGTCTGGCTGGCT | + |
Preference number: 6 (lower is better) Translates to: LVSSLLLVMCPE*VPSGGFLVWLA Trigger: AGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 90 bp | TCTGTGTCTTTGGTGTCCTCACTGCTGCTTGTTATGTGTCCGGAATaGGTTCCTTCTGGTGGGTTCCTGGTCTGGCTGGCTTCAGGAGTG | + |
Preference number: 6 (lower is better) Translates to: SVSLVSSLLLVMCPE*VPSGGFLVWLASGV Trigger: CACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 90 bp | CTGCCTCTGCATCTGGGTCTGTGTCTTTGGTGTCCTCACTGCTGCTaGTTATGTGTCCGGAATTGGTTCCTTCTGGTGGGTTCCTGGTCT | + |
Preference number: 6 (lower is better) Translates to: LPLHLGLCLWCPHCC*LCVRNWFLLVGSWS Trigger: AGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGACCCAGATGCAGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | ACTGCTGCTTGTTATGTGTCCGGAATTGGTTCCTTCTaGTGGGTTCCTGGTCTGGCTGGCTTCAGGAGTGAA | + |
Preference number: 6 (lower is better) Translates to: TAACYVSGIGSF*WVPGLAGFRSE Trigger: TTCACTCCTGAAGCCAGCCAGACCAGGAACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | ACTAGAGCGTCTCACACCCCCTGTGTCCCGTCCTCCTaGATAGCTAATGGATGTCTTGGATGTGGGAAACTT | + |
Preference number: 6 (lower is better) Translates to: TRASHTPCVPSS*IANGCLGCGKL Trigger: AAGTTTCCCACATCCAAGACATCCATTAGCTATCCAGGAGGACGGGACACAGGGGGTGTGAGACGCTCTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 72 bp | CCCAGGGCTAGCCCTTTCTTAGAGATGGCAAAAGCCTaGACCCAGAGCACCTCTCTCATATACAGCCAACCA | + |
Preference number: 6 (lower is better) Translates to: PRASPFLEMAKA*TQSTSLIYSQP Trigger: TGGTTGGCTGTATATGAGAGAGGTGCTCTGGGTCAAGGCTTTTGCCATCTCTAAGAAAGGGCTAGCCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595326.1 |
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CDS TCA 72 bp | TGCCCTGCTGAAGGTGGGTCTGCACTTGTAGGGAAATaGGCTCTCAAAGATCCAGGGAGAAAGAAGATCCAG | + |
Preference number: 6 (lower is better) Translates to: CPAEGGSALVGK*ALKDPGRKKIQ Trigger: CTGGATCTTCTTTCTCCCTGGATCTTTGAGAGCTCATTTCCCTACAAGTGCAGACCCACCTTCAGCAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | CTGCATCTGGGTCTGTGTCTTTGGTGTCCTCACTGCTaGTTGTTATGTGTCCGGAATTGGTTCCTTCTGGTG | + |
Preference number: 6 (lower is better) Translates to: LHLGLCLWCPHC*LLCVRNWFLLV Trigger: CACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGACCCAGATGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | CCTGAGCACAGTGTTTACAGAGAAGACAGCGGGTCTTaGTCTGAGCATGGGAACATGATGGCAATTAGGAGG | + |
Preference number: 6 (lower is better) Translates to: PEHSVYREDSGS*SEHGNMMAIRR Trigger: CCTCCTAATTGCCATCATGTTCCCATGCTCAGAGCAAGACCCGCTGTCTTCTCTGTAAACACTGTGCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | CGTAAGTCCTGCTCATCCCCTCCCAGGATTTTTCACTaGACATGGAAAGGATCCACCTTTCTGCAAGGTCCT | + |
Preference number: 6 (lower is better) Translates to: RKSCSSPPRIFH*TWKGSTFLQGP Trigger: AGGACCTTGCAGAAAGGTGGATCCTTTCCATGTGCAGTGAAAAATCCTGGGAGGGGATGAGCAGGACTTACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 72 bp | CATCTGGGTCTGTGTCTTTGGTGTCCTCACTGCTGCTaGTTATGTGTCCGGAATTGGTTCCTTCTGGTGGGT | + |
Preference number: 6 (lower is better) Translates to: HLGLCLWCPHCC*LCVRNWFLLVG Trigger: ACCCACCAGAAGGAACCAATTCCGGACACATAACAAGCAGCAGTGAGGACACCAAAGACACAGACCCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | GATGTAGCAAGTGTGTTAGGGACACATGTGACACAGTaGAGGGATCCTACATGTTGGGGACCAGCCTCAACA | + |
Preference number: 6 (lower is better) Translates to: DVASVLGTHVTQ*RDPTCWGPAST Trigger: TGTTGAGGCTGGTCCCCAACATGTAGGATCCCTTCACTGTGTCACATGTGTCCCTAACACACTTGCTACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | GTGCAAAATGTGGAGGCTGCAAAAGGTGCCGAGCTCTaGTCTCCACACTATTTATTGAGTACAGTCCCTTCG | + |
Preference number: 6 (lower is better) Translates to: VQNVEAAKGAEL*SPHYLLSTVPS Trigger: CGAAGGGACTGTACTCAATAAATAGTGTGGAGACCAGAGCTCGGCACCTTTTGCAGCCTCCACATTTTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 72 bp | TACAATTTTCTTGAGCTTTGCAACCCCCTCTTCACCTaGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCT | + |
Preference number: 6 (lower is better) Translates to: YNFLELCNPLFT*DVNFREAGPSP Trigger: AGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | ACCTCAAGCCAGTCCCGCCTGATCACATTTCCCTGTTaGGTGGTCCTTGTGGTTCTCATCACTATTACAATT | + |
Preference number: 6 (lower is better) Translates to: TSSQSRLITFPC*VVLVVLITITI Trigger: AATTGTAATAGTGATGAGAACCACAAGGACCACCCAACAGGGAAATGTGATCAGGCGGGACTGGCTTGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 90 bp | CATCACTATTACAATTTTCTTGAGCTTTGCAACCCCCTCTTCACCTaGGATGTGAACTTCAGGGAAGCAGGGCCGTCACCTGCCTTGTTT | + |
Preference number: 6 (lower is better) Translates to: HHYYNFLELCNPLFT*DVNFREAGPSPALF Trigger: AAACAAGGCAGGTGACGGCCCTGCTTCCCTGAAGTTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTAATAGTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 90 bp | ATCACATCCAGCCAGCTGCTCCAGCCCAAATGTGATGAGATCATTTaGATTCCCCTTCTCTCCACATCCTCTCCCCATATTCAATTCAAC | + |
Preference number: 6 (lower is better) Translates to: ITSSQLLQPKCDEII*IPLLSTSSPHIQFN Trigger: GTTGAATTGAATATGGGGAGAGGATGTGGAGAGAAGGGGAATCAAAATGATCTCATCACATTTGGGCTGGAGCAGCTGGCTGGATGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | ACAAATGCCATGGTAAGGTTCAGAAGTTACCCTGTATaGTTCAAAAAGCTGGGAAGCCCTCAGCTCCGAGAA | + |
Preference number: 6 (lower is better) Translates to: TNAMVRFRSYPV*FKKLGSPQLRE Trigger: TTCTCGGAGCTGAGGGCTTCCCAGCTTTTTGAACCATACAGGGTAACTTCTGAACCTTACCATGGCATTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | TCTCCTTTGTGCTCAAACAGCATAACTTTAACTTGTTaGAGAGTAGCTAGTAGGAGCGGCCTTGACTGGGAG | + |
Preference number: 6 (lower is better) Translates to: SPLCSNSITLTC*RVASRSGLDWE Trigger: CTCCCAGTCAAGGCCGCTCCTACTAGCTACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 90 bp | GAAAGTAAACAACCCAAATATACACAAACAGTAGACTGCTCTGGCTaGCATACAGAGAGGTCCATTGCCCTTTTGGGTGGGCCTAAGAAG | + |
Preference number: 6 (lower is better) Translates to: ESKQPKYTQTVDCSG*HTERSIALLGGPKK Trigger: CTTCTTAGGCCCACCCAAAAGGGCAATGGACCTCTCTGTATGCAAGCCAGAGCAGTCTACTGTTTGTGTATATTTGGGTTGTTTACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | GTTCAAAAAGCTGGGAAGCCCTCAGCTCCGAGAAATTaGAATTGCCCACCTCTTTCCTGGAAAACTCATGAA | + |
Preference number: 6 (lower is better) Translates to: VQKAGKPSAPRN*NCPPLSWKTHE Trigger: TTCATGAGTTTTCCAGGAAAGAGGTGGGCAATTTCAATTTCTCGGAGCTGAGGGCTTCCCAGCTTTTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | CTCAACACTACCCGTAGGGTACCCGAAGTCTGGTGGTaGCAAAGGATTGAGAAAAGACAAGTTAAGAGTGAA | + |
Preference number: 6 (lower is better) Translates to: LNTTRRVPEVWW*QRIEKRQVKSE Trigger: TTCACTCTTAACTTGTCTTTTCTCAATCCTTTGTCACCACCAGACTTCGGGTACCCTACGGGTAGTGTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | GTGCTGTTTGGTCCGTTTTTACAGAGTGCTGACTGGTaGATTTACAAACCTTTAGCTAGACACAGAGCACTG | + |
Preference number: 6 (lower is better) Translates to: VLFGPFLQSADW*IYKPLARHRAL Trigger: CAGTGCTCTGTGTCTAGCTAAAGGTTTGTAAATGCACCAGTCAGCACTCTGTAAAAACGGACCAAACAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | TGGTCCTTGTGGTTCTCATCACTATTACAATTTTCTTaGGCTTTGCAACCCCCTCTTCACCTTGGATGTGAA | + |
Preference number: 6 (lower is better) Translates to: WSLWFSSLLQFS*ALQPPLHLGCE Trigger: TTCACATCCAAGGTGAAGAGGGGGTTGCAAAGCTCAAGAAAATTGTAATAGTGATGAGAACCACAAGGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | AGAGAAACGCTCATCAGTGCCATGGCAATTTACAAATaGCATGGTAAGGTTCAGAAGTTACCCTGTATGGTT | + |
Preference number: 6 (lower is better) Translates to: RETLISAMAIYK*HGKVQKLPCMV Trigger: AACCATACAGGGTAACTTCTGAACCTTACCATGGCATTTGTAAATTGCCATGGCACTGATGAGCGTTTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CCA 72 bp | CATCCTGCTGATTTGTCCATTTTACAGAGCGCTGATTaGTCTATTTTACAGAGTGCTGTTTGGTCCGTTTTT | + |
Preference number: 6 (lower is better) Translates to: HPADLSILQSAD*SILQSAVWSVF Trigger: AAAAACGGACCAAACAGCACTCTGTAAAATAGACCAATCAGCGCTCTGTAAAATGGACAAATCAGCAGGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS TCA 72 bp | AAATTGAAATTGCCCACCTCTTTCCTGGAAAACTCATaGATAATCCACCCTTGTTTAGCACATCATCAAGCA | + |
Preference number: 6 (lower is better) Translates to: KLKLPTSFLENS*IIHPCLAHHQA Trigger: TGCTTGATGATGTGCTAAACAAGGGTGGATTATTCATGAGTTTTCCAGGAAAGAGGTGGGCAATTTCAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS CAA 90 bp | ATCACAGGCATAATCTATAGCAATAGCAGTTTAAATGAGTCTCCTTaGTGCTCAAACAGCATAACTTTAACTTGTTGGAGAGTAGCTAGT | + |
Preference number: 6 (lower is better) Translates to: ITGIIYSNSSLNESP*CSNSITLTCWRVAS Trigger: ACTAGCTACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGACTCATTTAAACTGCTATTGCTATAGATTATGCCTGTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |
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CDS GCA 72 bp | ATCTATAGCAATAGCAGTTTAAATGAGTCTCCTTTGTaGTCAAACAGCATAACTTTAACTTGTTGGAGAGTA | + |
Preference number: 6 (lower is better) Translates to: IYSNSSLNESPL*SNSITLTCWRV Trigger: TACTCTCCAACAAGTTAAAGTTATGCTGTTTGAGCACAAAGGAGACTCATTTAAACTGCTATTGCTATAGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601241.6 |