Pregenerated sensors for SCGB2A2 (Homo sapiens)
Ensembl gene IDs: ENSG00000110484Ensembl transcript IDs: ENST00000227918.3, ENST00000525380.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAAGACATAAGAAAGAGAAGGTGTGGTTTGCAGCAATCCGTAGTTaGTTTCTCACCATACCCTGCAGTTCTGTGAGCCAAAGGTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: KRHKKEKVWFAAIRS*FLTIPCSSVSQRSC Trigger: GCAAGACCTTTGGCTCACAGAACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTCTTTCTTATGTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| 3UTR-3UTR TCA 90 bp | CAATTCTTCCTCCATGGTGGTTTCATACCCATGATCTACAGTTGCCTATTGGATGTGTTTGTGTCTGGATaGTTGTGTGCTGGTGTGATT | + |
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Preference number: 2 (lower is better) Translates to: QFFLHGGFIPMIYSCLLDVFVSG*LCAGVI Trigger: AATCACACCAGCACACAATCATCCAGACACAAACAC...ATCCAATAGGCAACTGTAGATCATGGGTATGAAACCACCATGGAGGAAGAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| 3UTR CAA 90 bp | TGTGTGTTTGCATGTGTCTGGATGTGTGTATGTGTGTTTCTGTGTTaGTGTGATTGTGTCTGTGTTTGTGAGCATGAATTAGAGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: CVFACVWMCVCVFLC*CDCVCVCEHELESS Trigger: AGAGCTCTCTAATTCATGCTCACAAACACAGACACAATCACACAAACACAGAAACACACATACACACATCCAGACACATGCAAACACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGTTTGAGGCAATTCTTCCTCCATGGTGGTTTCATACCCATGATCTACAGACAACACAGGGACACTaGATGTTTTTCTTGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: FLFEAILPPWWFHTHDLQTTQGH*MFFLMA Trigger: TGCCATCAAGAAAAACATCCAGTGTCCCTGTGTTGT...CTGTAGATCATGGGTATGAAACCACCATGGAGGAAGAATTGCCTCAAACAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAGTTTTCTCTGCAGATTGGTCTATAGGTGCGGGTCTTCTGGAAAATTGTCACTGGATGTTTTTCTaGATGGCAAAGTCATTAGAC | + |
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Preference number: 3 (lower is better) Translates to: REVFSADWSIGAGLLENCHWMFF*MAKSLD Trigger: GTCTAATGACTTTGCCATCAAGAAAAACATCCAGTG...ACAATTTTCCAGAAGACCCGCACCTATAGACCAATCTGCAGAGAAAACTTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR TCA 90 bp | GAGAAGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTGCAGTTCAGCAACTTCATGGTaGGGCTGCTGCTGTCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: EKVWFAAIRSWFLTIPCSSATSW*GCCCRC Trigger: ACACCGACAGCAGCAGCCTCACCATGAAGTTGCTGA...ACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR TCA 90 bp | AGAGCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCTCAGCAACTTCATGGTaGGGCTGCTGCTGTCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: RALGIGKTSTDLSFSSLASATSW*GCCCRC Trigger: ACACCGACAGCAGCAGCCTCACCATGAAGTTGCTGA...GGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CCA 90 bp | GCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCCTAGAGCCCACTTGTCCCTaGTCAGGGGATTTAAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ALGIGKTSTDLSFSSLALEPTCP*SGDLKS Trigger: GCTTTTTAAATCCCCTGACCAGGGACAAGTGGGCTC...TAGGGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR TCA 90 bp | GCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCCTAATTGTCAGTGAGAAATaGAGAGCCCACTTGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ALGIGKTSTDLSFSSLALIVSEK*RAHLSL Trigger: CAGGGACAAGTGGGCTCTTCATTTCTCACTGACAAT...TAGGGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR GCA 90 bp | AGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTGCAGTTCTGTTTCTCACCATACCCTaGAGTTCTGTGAGCCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RCGLQQSVVGFSPYPAVLFLTIP*SSVSQR Trigger: CCTTTGGCTCACAGAACTGCAGGGTATGGTGAGAAA...CAGAACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR TCA 90 bp | AGAAAGAGAAGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTTACCCTGCAGTTCTGTaGGCCAAAGGTCTTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: RKRRCGLQQSVVGFSPYPYPAVL*AKGLAE Trigger: TTCTGCAAGACCTTTGGCTCACAGAACTGCAGGGTA...AGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR TCA 90 bp | AGAGCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCGTGGTTTCATACCCATaGTCTACAGTTGCCTATTGG | + |
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Preference number: 4 (lower is better) Translates to: RALGIGKTSTDLSFSSLAVVSYP*STVAYW Trigger: CCAATAGGCAACTGTAGATCATGGGTATGAAACCAC...GGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CCA 90 bp | GCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCCTAGTTTTCTCTGCAGATTaGTCTATAGGTGCGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ALGIGKTSTDLSFSSLALVFSAD*SIGAGL Trigger: AAGACCCGCACCTATAGACCAATCTGCAGAGAAAAC...TAGGGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CCA 90 bp | GAGAAGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTGCAGTAAGAAAGAGAAGGTGTaGTTTGCAGCAATCCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: EKVWFAAIRSWFLTIPCSKKEKV*FAAIRS Trigger: ACTACGGATTGCTGCAAACCACACCTTCTCTTTCTT...ACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR CCA 90 bp | AGAGCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCACAACACAGGGACACTaGATGTTTTTCTTGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: RALGIGKTSTDLSFSSLATTQGH*MFFLMA Trigger: TGCCATCAAGAAAAACATCCAGTGTCCCTGTGTTGT...GGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR TCA 90 bp | GAGAAGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTGCAGTTGGCATTGTCGTCTATaGACTCTTGAAGAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: EKVWFAAIRSWFLTIPCSWHCRL*TLEEVL Trigger: AAGAACTTCTTCAAGAGTTCATAGACGACAATGCCA...ACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR TCA 90 bp | AGAGAAGTTTTCTCTGCAGATTGGTCTATAGGTGCGGGTCTTCTGGAAAATTGTGTGTTTGTGTCTGGATaGTTGTGTGCTGGTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: REVFSADWSIGAGLLENCVFVSG*LCAGVI Trigger: AATCACACCAGCACACAATCATCCAGACACAAACAC...ACAATTTTCCAGAAGACCCGCACCTATAGACCAATCTGCAGAGAAAACTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CCA 90 bp | AGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTGCAGTTCTGAGTCTTAGACACTTGTaGATTGATTGTCTTGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: RCGLQQSVVGFSPYPAVLSLRHL*IDCLGN Trigger: ATTTCCAAGACAATCAATCCACAAGTGTCTAAGACT...CAGAACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR GCA 90 bp | TTTTTGTTTGAGGCAATTCTTCCTCCATGGTGGTTTCATACCCATGATCTACAGCCCATGATCTACAGTTaGCTATTGGATAGTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: FLFEAILPPWWFHTHDLQPMIYS*LLDSPR Trigger: CCTTGGACTATCCAATAGGCAACTGTAGATCATGGG...CTGTAGATCATGGGTATGAAACCACCATGGAGGAAGAATTGCCTCAAACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CCA 90 bp | TCTGTGGTTGTGTGGTTCTGTCTGTGTGTTTGTGTTTGTGTCTGGATGATTGTGATTCTTCCTCCATGGTaGTTTCATACCCATGATCTA | + |
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Preference number: 4 (lower is better) Translates to: SVVVWFCLCVCVCVWMIVILPPW*FHTHDL Trigger: TAGATCATGGGTATGAAACCACCATGGAGGAAGAAT...CACAATCATCCAGACACAAACACAAACACACAGACAGAACCACACAACCACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR TCA 90 bp | CAATTCTTCCTCCATGGTGGTTTCATACCCATGATCTACAGTTGCCTATTGGATTGGCATTGTCGTCTATaGACTCTTGAAGAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QFFLHGGFIPMIYSCLLDWHCRL*TLEEVL Trigger: AAGAACTTCTTCAAGAGTTCATAGACGACAATGCCA...ATCCAATAGGCAACTGTAGATCATGGGTATGAAACCACCATGGAGGAAGAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTTGTTTGAGGCAATTCTTCCTCCATGGTGGTTTCATACCCATGATCTAAGATTGGTCTATAGGTaGGGGTCTTCTGGAAAATTG | + |
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Preference number: 4 (lower is better) Translates to: WFLFEAILPPWWFHTHDLRLVYR*GSSGKL Trigger: CAATTTTCCAGAAGACCCGCACCTATAGACCAATCT...TAGATCATGGGTATGAAACCACCATGGAGGAAGAATTGCCTCAAACAAAAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CCA 90 bp | AGAAAGAGAAGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTAGAGTTTCATCCGTTTaGTTAAGAAAACATTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RKRRCGLQQSVVGFSPYPRVSSV*LRKHSF Trigger: GAAGGAATGTTTTCTTAACCAAACGGATGAAACTCT...AGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR CCA 90 bp | TGGTTTTTGTTTGAGGCAATTCTTCCTCCATGGTGGTTTCATACCCATGATCTATCTACAGTTGCCTATTaGATAGTCCAAGGTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: WFLFEAILPPWWFHTHDLSTVAY*IVQGFS Trigger: TGAGAAACCTTGGACTATCCAATAGGCAACTGTAGA...TAGATCATGGGTATGAAACCACCATGGAGGAAGAATTGCCTCAAACAAAAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| 3UTR CAA 72 bp | GCATGTGTCTGGATGTGTGTATGTGTGTTTCTGTGTTaGTGTGATTGTGTCTGTGTTTGTGAGCATGAATTA | + |
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Preference number: 4 (lower is better) Translates to: ACVWMCVCVFLC*CDCVCVCEHEL Trigger: TAATTCATGCTCACAAACACAGACACAATCACACAAACACAGAAACACACATACACACATCCAGACACATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CCA 90 bp | GTATGTGTGTTTCTGTGTTTGTGTGATTGTGTCTGTGTTTGTGAGCATGAATTAGCAATTCTTCCTCCATaGTGGTTTCATACCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: VCVFLCLCDCVCVCEHELAILPP*WFHTHD Trigger: ATCATGGGTATGAAACCACCATGGAGGAAGAATTGC...TAATTCATGCTCACAAACACAGACACAATCACACAAACACAGAAACACACATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CCA 90 bp | TTTTTGTTTGAGGCAATTCTTCCTCCATGGTGGTTTCATACCCATGATCTACAGAGAGTTTCATCCGTTTaGTTAAGAAAACATTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: FLFEAILPPWWFHTHDLQRVSSV*LRKHSF Trigger: GAAGGAATGTTTTCTTAACCAAACGGATGAAACTCT...CTGTAGATCATGGGTATGAAACCACCATGGAGGAAGAATTGCCTCAAACAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CCA 90 bp | GTATGTGTGTTTCTGTGTTTGTGTGATTGTGTCTGTGTTTGTGAGCATGAATTAAGTCTTAGACACTTGTaGATTGATTGTCTTGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: VCVFLCLCDCVCVCEHELSLRHL*IDCLGN Trigger: ATTTCCAAGACAATCAATCCACAAGTGTCTAAGACT...TAATTCATGCTCACAAACACAGACACAATCACACAAACACAGAAACACACATAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CAA 90 bp | GAGAAGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTGCAGTAAGAGAAGGTGTGGTTaGCAGCAATCCGTAGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: EKVWFAAIRSWFLTIPCSKRRCG*QQSVVG Trigger: ACCAACTACGGATTGCTGCAAACCACACCTTCTCTT...ACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR CAA 90 bp | GCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCCTATCTGTGTCTGTGTCTTaGCCTGTCTGTCTATGTTTG | + |
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Preference number: 5 (lower is better) Translates to: ALGIGKTSTDLSFSSLALSVSVS*PVCLCL Trigger: CAAACATAGACAGACAGGCAAAGACACAGACACAGA...TAGGGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CAA 90 bp | GCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCCTATGTTCACTAGTGGCTTaGGCATTGTCAGTGAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: ALGIGKTSTDLSFSSLALCSLVA*ALSVRN Trigger: ATTTCTCACTGACAATGCCAAAGCCACTAGTGAACA...TAGGGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CAA 90 bp | GCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCCTAATCTACAGTTGCCTATaGGATAGTCCAAGGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: ALGIGKTSTDLSFSSLALIYSCL*DSPRFL Trigger: GAGAAACCTTGGACTATCCAATAGGCAACTGTAGAT...TAGGGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CAA 90 bp | GAGAAGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTGCAGTTTCAGTCTTAGACACTaGTGGATTGATTGTCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: EKVWFAAIRSWFLTIPCSFSLRH*WIDCLG Trigger: TCCAAGACAATCAATCCACAAGTGTCTAAGACTGAA...ACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR CAA 90 bp | GTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTGCAGTTCTGTGTGTGGATTGATTGTCTaGGAAATCACATTCTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: VWFAAIRSWFLTIPCSSVCGLIV*EITFSN Trigger: ATTGGAGAATGTGATTTCCAAGACAATCAATCCACA...CACAGAACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR CAA 90 bp | GCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCCTATGTGGATTGATTGTCTaGGAAATCACATTCTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: ALGIGKTSTDLSFSSLALCGLIV*EITFSN Trigger: ATTGGAGAATGTGATTTCCAAGACAATCAATCCACA...TAGGGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CAA 90 bp | AGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTGCAGTTCTGCAGAGTTTCATCCGTTaGGTTAAGAAAACATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RCGLQQSVVGFSPYPAVLQSFIR*VKKTFL Trigger: AAGGAATGTTTTCTTAACCAAACGGATGAAACTCTG...CAGAACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR CAA 90 bp | GCTCTGGGGATAGGTAAGACTTCTACCGACCTTTCCTTTTCCTCTCTTGCCCTAACTATTGGTTTTTGTTaGAGGCAATTCTTCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: ALGIGKTSTDLSFSSLALTIGFC*RQFFLH Trigger: ATGGAGGAAGAATTGCCTCAAACAAAAACCAATAGT...TAGGGCAAGAGAGGAAAAGGAAAGGTCGGTAGAAGTCTTACCTATCCCCAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CAA 90 bp | TCTGTGGTTGTGTGGTTCTGTCTGTGTGTTTGTGTTTGTGTCTGGATGATTGTGAATGTAAGAAAAGGCTaGTTCACTAGTGGCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: SVVVWFCLCVCVCVWMIVNVRKG*FTSGFG Trigger: GCCAAAGCCACTAGTGAACAAGCCTTTTCTTACATT...CACAATCATCCAGACACAAACACAAACACACAGACAGAACCACACAACCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CAA 90 bp | AGAAAGAGAAGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTTTAGACACTTGTGGATaGATTGTCTTGGAAATCACA | + |
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Preference number: 5 (lower is better) Translates to: RKRRCGLQQSVVGFSPYPLDTCG*IVLEIT Trigger: TGTGATTTCCAAGACAATCAATCCACAAGTGTCTAA...AGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR CAA 90 bp | AGACATAAGAAAGAGAAGGTGTGGTTTGCAGCAATCCGTAGTTGGTTTCTCACCATAAACACCTCAACATaGCTCAGAGTTTCATCCGTT | + |
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Preference number: 5 (lower is better) Translates to: RHKKEKVWFAAIRSWFLTINTST*LRVSSV Trigger: AACGGATGAAACTCTGAGCAATGTTGAGGTGTTTAT...GGTGAGAAACCAACTACGGATTGCTGCAAACCACACCTTCTCTTTCTTATGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS-3UTR CAA 90 bp | TCTGTGGTTGTGTGGTTCTGTCTGTGTGTTTGTGTTTGTGTCTGGATGATTGTGTTAGACACTTGTGGATaGATTGTCTTGGAAATCACA | + |
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Preference number: 5 (lower is better) Translates to: SVVVWFCLCVCVCVWMIVLDTCG*IVLEIT Trigger: TGTGATTTCCAAGACAATCAATCCACAAGTGTCTAA...CACAATCATCCAGACACAAACACAAACACACAGACAGAACCACACAACCACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CAA 90 bp | AGAGAAGTTTTCTCTGCAGATTGGTCTATAGGTGCGGGTCTTCTGGAAAATTGTCAGAGTTTCATCCGTTaGGTTAAGAAAACATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: REVFSADWSIGAGLLENCQSFIR*VKKTFL Trigger: AAGGAATGTTTTCTTAACCAAACGGATGAAACTCTG...ACAATTTTCCAGAAGACCCGCACCTATAGACCAATCTGCAGAGAAAACTTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS-3UTR CAA 90 bp | TTTTTGTTTGAGGCAATTCTTCCTCCATGGTGGTTTCATACCCATGATCTACAGATAAACACCTCAACATaGCTCAGAGTTTCATCCGTT | + |
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Preference number: 5 (lower is better) Translates to: FLFEAILPPWWFHTHDLQINTST*LRVSSV Trigger: AACGGATGAAACTCTGAGCAATGTTGAGGTGTTTAT...CTGTAGATCATGGGTATGAAACCACCATGGAGGAAGAATTGCCTCAAACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525380.1 |
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| CDS GCA 72 bp | TTTGCAGCAATCCGTAGTTGGTTTCTCACCATACCCTaGAGTTCTGTGAGCCAAAGGTCTTGCAGAAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: FAAIRSWFLTIP*SSVSQRSCRKL Trigger: TAACTTTCTGCAAGACCTTTGGCTCACAGAACTGCAGGGTATGGTGAGAAACCAACTACGGATTGCTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227918.3 |
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| CDS CAA 72 bp | TTGTATTCAGTCTTAGACACTTGTGGATTGATTGTCTaGGAAATCACATTCTCCAATAAGGGGCAGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LYSVLDTCGLIV*EITFSNKGQPE Trigger: CTCTGGCTGCCCCTTATTGGAGAATGTGATTTCCAAGACAATCAATCCACAAGTGTCTAAGACTGAATACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227918.3 ENST00000525380.1 |
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