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Pregenerated sensors for SCGB2A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124939

Ensembl transcript IDs: ENST00000244930.6

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AGTCCAAAGTTTTTCAGAGTTCTATGTGACTGGTTGAGGAAACACTaGTTGAATTTCCCCATAGCCTCTGCAGCGGCATCACTGTCTATG +
Preference number: 5 (lower is better)
Translates to: SPKFFRVLCDWLRKH*LNFPIASAAASLSM
Trigger: CATAGACAGTGATGCCGCTGCAGAGGCTATGGGGAAATTCAAGCAGTGTTTCCTCAACCAGTCACATAGAACTCTGAAAAACTTTGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244930.6
CDS CCA 90 bp ACTGTATGCATCATCAGTCCAAAGTTTTTCAGAGTTCTATGTGACTaGTTGAGGAAACACTGCTTGAATTTCCCCATAGCCTCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: TVCIISPKFFRVLCD*LRKHCLNFPIASAA
Trigger: CGCTGCAGAGGCTATGGGGAAATTCAAGCAGTGTTTCCTCAACCAGTCACATAGAACTCTGAAAAACTTTGGACTGATGATGCATACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244930.6
CDS CAA 72 bp TTCAGAGTTCTATGTGACTGGTTGAGGAAACACTGCTaGAATTTCCCCATAGCCTCTGCAGCGGCATCACTG +
Preference number: 6 (lower is better)
Translates to: FRVLCDWLRKHC*NFPIASAAASL
Trigger: CAGTGATGCCGCTGCAGAGGCTATGGGGAAATTCAAGCAGTGTTTCCTCAACCAGTCACATAGAACTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244930.6
CDS CAA 90 bp CCAAAGTTTTTCAGAGTTCTATGTGACTGGTTGAGGAAACACTGCTaGAATTTCCCCATAGCCTCTGCAGCGGCATCACTGTCTATGAAC +
Preference number: 6 (lower is better)
Translates to: PKFFRVLCDWLRKHC*NFPIASAAASLSMN
Trigger: GTTCATAGACAGTGATGCCGCTGCAGAGGCTATGGGGAAATTCAAGCAGTGTTTCCTCAACCAGTCACATAGAACTCTGAAAAACTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244930.6
CDS CAA 90 bp GTATGCATCATCAGTCCAAAGTTTTTCAGAGTTCTATGTGACTGGTaGAGGAAACACTGCTTGAATTTCCCCATAGCCTCTGCAGCGGCA +
Preference number: 6 (lower is better)
Translates to: VCIISPKFFRVLCDW*RKHCLNFPIASAAA
Trigger: TGCCGCTGCAGAGGCTATGGGGAAATTCAAGCAGTGTTTCCTCAACCAGTCACATAGAACTCTGAAAAACTTTGGACTGATGATGCATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244930.6
CDS GCA 72 bp TTTTTCAGAGTTCTATGTGACTGGTTGAGGAAACACTaGTTGAATTTCCCCATAGCCTCTGCAGCGGCATCA +
Preference number: 6 (lower is better)
Translates to: FFRVLCDWLRKH*LNFPIASAAAS
Trigger: TGATGCCGCTGCAGAGGCTATGGGGAAATTCAAGCAGTGTTTCCTCAACCAGTCACATAGAACTCTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244930.6
CDS CCA 72 bp ATCATCAGTCCAAAGTTTTTCAGAGTTCTATGTGACTaGTTGAGGAAACACTGCTTGAATTTCCCCATAGCC +
Preference number: 6 (lower is better)
Translates to: IISPKFFRVLCD*LRKHCLNFPIA
Trigger: GGCTATGGGGAAATTCAAGCAGTGTTTCCTCAACCAGTCACATAGAACTCTGAAAAACTTTGGACTGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244930.6
CDS CAA 72 bp ATCAGTCCAAAGTTTTTCAGAGTTCTATGTGACTGGTaGAGGAAACACTGCTTGAATTTCCCCATAGCCTCT +
Preference number: 6 (lower is better)
Translates to: ISPKFFRVLCDW*RKHCLNFPIAS
Trigger: AGAGGCTATGGGGAAATTCAAGCAGTGTTTCCTCAACCAGTCACATAGAACTCTGAAAAACTTTGGACTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244930.6
CDS CAA 72 bp AGAAGCTCTTTGTATTCAGGTATAGATATGTCGGAATaGATGGTCTTTTCAACCATGTCCTCCAGGAGTTTG +
Preference number: 6 (lower is better)
Translates to: RSSLYSGIDMSE*MVFSTMSSRSL
Trigger: CAAACTCCTGGAGGACATGGTTGAAAAGACCATCAATTCCGACATATCTATACCTGAATACAAAGAGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244930.6
CDS GCA 72 bp TTGGGTAAAGTTAATTACTCTTCATATTACACCAAATaGTGTCGTACACTGTATGCATCATCAGTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: LGKVNYSSYYTK*CRTLYASSVQS
Trigger: ACTTTGGACTGATGATGCATACAGTGTACGACAGCATTTGGTGTAATATGAAGAGTAATTAACTTTACCCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244930.6