Pregenerated sensors for SCGB1A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000149021Ensembl transcript IDs: ENST00000278282.3, ENST00000534397.5
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCAGGCAGCGGCAGAGGCTaGAGCAGTTGGGGATCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RCLWFIEESKAGGRGLKAGSGRG*SSWGSS Trigger: TGAAGATCCCCAACTGCTCCAGCCTCTGCCGCTGCC...TGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACAAGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGAGAGGCTGGAGCAGTTaGGGATCTTCAGCTTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: WFIEESKAGGRGLKAWQRRGWSS*GSSASK Trigger: TTTAGAAGCTGAAGATCCCCAACTGCTCCAGCCTCT...CCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| 3UTR CCA 72 bp | GAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATaGCAGCGGCAGAGGCTGGAGCAGTTGGGGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EESKAGGRGLKA*QRQRLEQLGIF Trigger: GAAGATCCCCAACTGCTCCAGCCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCTGGCAAGGCTGGTGGGCGTaGACTCAAAGCATGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KRARLVGVDSKHGSGRGWQGWWA*TQSMAA Trigger: CGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTG...CCAGCCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR GCA 90 bp | GGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCGGTGGAGGAGGGGGATaGTCTGGCCCGTCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLLKRARLVGVDSKHGSGGGGGG*SGPSLV Trigger: AACCAGAGACGGGCCAGAGCATCCCCCTCCTCCACC...GCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278282.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCCTTTCTCTGGGCTTTTaGGGGAGGGTGTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKRARLVGVDSKHGSGRGLSLGF*GRVSTS Trigger: GCTGGTGGACACCCTCCCCCAAAAGCCCAGAGAAAG...GCCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCTGGAGAGAGCAAGGCTGGTaGGCGTGGACTCAAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KRARLVGVDSKHGSGRGWREQGW*AWTQSM Trigger: CATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCT...CCAGCCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCTGGGTTTCGATGACACGCTaGAAGCTCGGGCAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRARLVGVDSKHGSGRGWVSMTR*KLGQIS Trigger: AGAGATCTGCCCGAGCTTTCAGCGTGTCATCGAAAC...CCAGCCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | TTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCGCCTCCCTCATGTCTTaGTCAGGGCTGAAAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKRARLVGVDSKHGSGRGASLMS*SGLKSS Trigger: GGAACTTTTCAGCCCTGATCAAGACATGAGGGAGGC...GCCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR GCA 90 bp | ATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCTTCAGCTGAGCCCCTaGCTCCCTCATGTCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: IEESKAGGRGLKAWQRQRLQLSP*LPHVLI Trigger: GATCAAGACATGAGGGAGGCAGGGGCTCAGCTGAAG...CCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCTGGATGCTTGTGGTTTATTaGAGAGAGCAAGGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRARLVGVDSKHGSGRGWMLVVY*REQGWW Trigger: CCACCAGCCTTGCTCTCTTCAATAAACCACAAGCAT...CCAGCCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR GCA 90 bp | TGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGCTCGGGCAGATCTCTaGAGAAGCGGAGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGLLKRARLVGVDSKHGSARADL*RSGAAA Trigger: TGCTGCAGCTCCGCTTCTGCAGAGATCTGCCCGAGC...GCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278282.3 |
||
| CDS-3UTR CCA 90 bp | TTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGACAGCGAGTTTCATGGTaGAGGAGGGGGATGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKRARLVGVDSKHGSGRQRVSW*RRGMLW Trigger: CCAGAGCATCCCCCTCCTCCACCATGAAACTCGCTG...TCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278282.3 |
||
| CDS-3UTR CCA 90 bp | TGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGCGGCAGAGGCTaGAGCAGTTGGGGATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGLLKRARLVGVDSKHGSGSGRG*SSWGSS Trigger: TGAAGATCCCCAACTGCTCCAGCCTCTGCCGCTGCC...GCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CCA 90 bp | TGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCCGTGGACTCAAAGCATaGCAGCGGCAGAGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CGLLKRARLVGVDSKHGSRGLKA*QRQRLE Trigger: CTCCAGCCTCTGCCGCTGCCATGCTTTGAGTCCACG...GCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | GGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCGTTTCGATGACACGCTaGAAGCTCGGGCAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLKRARLVGVDSKHGSGVSMTR*KLGQIS Trigger: AGAGATCTGCCCGAGCTTTCAGCGTGTCATCGAAAC...GCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CCA 90 bp | GATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATAGGAGGGGGATGCTCTaGCCCGTCTCTGGTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: DACGLLKRARLVGVDSKHRRGML*PVSGSV Trigger: GACGGAACCAGAGACGGGCCAGAGCATCCCCCTCCT...ATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACAAGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278282.3 |
||
| CDS-3UTR CCA 90 bp | TGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCCTTTCTCTGGGCTTTTaGGGGAGGGTGTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGLLKRARLVGVDSKHGSLSLGF*GRVSTS Trigger: GCTGGTGGACACCCTCCCCCAAAAGCCCAGAGAAAG...GCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | TTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCGAAACGCTGTGTGGCTaGAAACAGAGAAAGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LKRARLVGVDSKHGSGRGETLCG*KQRKKI Trigger: GATCTTCTTTCTCTGTTTTCAGCCACACAGCGTTTC...GCCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534397.5 |
||
| CDS-3UTR CCA 90 bp | GATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATCGTGGACTCAAAGCATaGCAGCGGCAGAGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DACGLLKRARLVGVDSKHRGLKA*QRQRLE Trigger: CTCCAGCCTCTGCCGCTGCCATGCTTTGAGTCCACG...ATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACAAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CCA 90 bp | AGATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCACAAGGCTGGTGGGCGTaGACTCAAAGCATGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RCLWFIEESKAGGRGLKAQGWWA*TQSMAA Trigger: CGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTG...TGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACAAGCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CCA 90 bp | TGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCAGAGAGCAAGGCTGGTaGGCGTGGACTCAAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CGLLKRARLVGVDSKHGSREQGW*AWTQSM Trigger: CATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCT...GCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | TGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGTGTCTTGATCAGGGCTaGAAAGTTCCATGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WFIEESKAGGRGLKAWQRCLDQG*KVPWQP Trigger: AGGCTGCCATGGAACTTTTCAGCCCTGATCAAGACA...CCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | TTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGAGCTGATGGTGAAATaGTCTCCAAGGCAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKRARLVGVDSKHGSGRELMVK*SPRQTP Trigger: TGGAGTCTGCCTTGGAGATCATTTCACCATCAGCTC...TCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | TTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAATGCTTGTGGTTTATTaGAGAGAGCAAGGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKRARLVGVDSKHGSGRMLVVY*REQGWW Trigger: CCACCAGCCTTGCTCTCTTCAATAAACCACAAGCAT...TCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR GCA 90 bp | AGATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCACTTCAGCTGAGCCCCTaGCTCCCTCATGTCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RCLWFIEESKAGGRGLKALQLSP*LPHVLI Trigger: GATCAAGACATGAGGGAGGCAGGGGCTCAGCTGAAG...TGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACAAGCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | TGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGATCTCTGCAGAAGAATaGAACGCTGTGTGGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WFIEESKAGGRGLKAWQRISAEE*NAVWLK Trigger: TTTCAGCCACACAGCGTTTCATTCTTCTGCAGAGAT...CCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534397.5 |
||
| CDS-3UTR TCA 90 bp | GATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATTGTCTTGATCAGGGCTaGAAAGTTCCATGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DACGLLKRARLVGVDSKHCLDQG*KVPWQP Trigger: AGGCTGCCATGGAACTTTTCAGCCCTGATCAAGACA...ATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACAAGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR GCA 90 bp | GATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGCTCGGGCAGATCTCTaGAGAAGAATGAAACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DACGLLKRARLVGVDSKHARADL*RRMKRC Trigger: ACAGCGTTTCATTCTTCTGCAGAGATCTGCCCGAGC...ATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACAAGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534397.5 |
||
| CDS-3UTR CAA 90 bp | TTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGCTTTCTCTGGGCTTTaGGGGGAGGGTGTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLKRARLVGVDSKHGSGRAFSGL*GEGVHQ Trigger: CTGGTGGACACCCTCCCCCAAAAGCCCAGAGAAAGC...TCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CAA 90 bp | TGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGCTTTCTCTGGGCTTTaGGGGGAGGGTGTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: CGLLKRARLVGVDSKHGSAFSGL*GEGVHQ Trigger: CTGGTGGACACCCTCCCCCAAAAGCCCAGAGAAAGC...GCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CAA 90 bp | ATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGTGCCTCCCTCATGTCTaGATCAGGGCTGAAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IEESKAGGRGLKAWQRQRCLPHV*IRAEKF Trigger: GAACTTTTCAGCCCTGATCAAGACATGAGGGAGGCA...CCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CAA 90 bp | ATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGGATGCTTGTGGTTTATaGAAGAGAGCAAGGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IEESKAGGRGLKAWQRQRDACGL*KRARLV Trigger: CACCAGCCTTGCTCTCTTCAATAAACCACAAGCATC...CCTCTGCCGCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS-3UTR CAA 90 bp | TGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCTGCCTCCCTCATGTCTaGATCAGGGCTGAAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGLLKRARLVGVDSKHGSCLPHV*IRAEKF Trigger: GAACTTTTCAGCCCTGATCAAGACATGAGGGAGGCA...GCTGCCATGCTTTGAGTCCACGCCCACCAGCCTTGCTCTCTTCAATAAACCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278282.3 ENST00000534397.5 |
||
| CDS GCA 90 bp | CATGAGGAGGGTTTCGATGACACGCTGAAAGCTCGGGCAGATCTCTaGAGAAGAATGAAACGCTGTGTGGCTGAAAACAGAGAAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HEEGFDDTLKARADL*RRMKRCVAENRERR Trigger: TCTTCTTTCTCTGTTTTCAGCCACACAGCGTTTCATTCTTCTGCAGAGATCTGCCCGAGCTTTCAGCGTGTCATCGAAACCCTCCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534397.5 |
||
| CDS TCA 72 bp | GAGGGTGTGTCCATGAGGAGGGTTTCGATGACACGCTaGAAGCTCGGGCAGATCTCTGCAGAAGCGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EGVSMRRVSMTR*KLGQISAEAEL Trigger: CAGCTCCGCTTCTGCAGAGATCTGCCCGAGCTTTCAGCGTGTCATCGAAACCCTCCTCATGGACACACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278282.3 |
||
| CDS GCA 72 bp | GGTTTCGATGACACGCTGAAAGCTCGGGCAGATCTCTaGAGAAGAATGAAACGCTGTGTGGCTGAAAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GFDDTLKARADL*RRMKRCVAENR Trigger: TCTGTTTTCAGCCACACAGCGTTTCATTCTTCTGCAGAGATCTGCCCGAGCTTTCAGCGTGTCATCGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534397.5 |
||