RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCG5 (Homo sapiens)

Ensembl gene IDs: ENSG00000166922

Ensembl transcript IDs: ENST00000300175.8, ENST00000413748.6, ENST00000470349.5, ENST00000471027.1, ENST00000475752.1, ENST00000494364.5, ENST00000497208.5, ENST00000498069.5, ENST00000498607.2, ENST00000614359.1, ENST00000631581.1, ENST00000632219.1, ENST00000632674.1, ENST00000632955.1, ENST00000632972.1, ENST00000633221.1, ENST00000633420.1, ENST00000633591.1, ENST00000633996.1

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCTTaGGTACAGCCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTG +
Preference number: 1 (lower is better)
Translates to: CLLRRSQVKCVSSSS*VQPSLLVYNNAQGL
Trigger: CAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
3UTR TCA 90 bp ATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCAAATaGCAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACA +
Preference number: 1 (lower is better)
Translates to: ITMPKGWMNYIIKIK*QLSTDLAKIVQPQT
Trigger: TGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
3UTR-3UTR TCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTG +
Preference number: 2 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPAHKPC*GLTGNV
Trigger: CACATTACCTGTTAGGCCTCAGCATGGCTTATGTGC...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
3UTR-3UTR TCA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTG +
Preference number: 2 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTAHKPC*GLTGNV
Trigger: CACATTACCTGTTAGGCCTCAGCATGGCTTATGTGC...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
3UTR-3UTR TCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTG +
Preference number: 2 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAAHKPC*GLTGNV
Trigger: CACATTACCTGTTAGGCCTCAGCATGGCTTATGTGC...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
3UTR-3UTR TCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTG +
Preference number: 2 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLAHKPC*GLTGNV
Trigger: CACATTACCTGTTAGGCCTCAGCATGGCTTATGTGC...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
3UTR-3UTR TCA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCGCAGAATCATCGGTGTaGAGACAATACACTATCTAC +
Preference number: 2 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLAESSV*RQYTIY
Trigger: GTAGATAGTGTATTGTCTTCACACCGATGATTCTGC...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
3UTR-3UTR TCA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCAAACTGCAAGAAATCTaGGCCTTTCATAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLKLQEI*AFHSLA
Trigger: AGCAAGACTATGAAAGGCTCAGATTTCTTGCAGTTT...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
3UTR-3UTR CCA 90 bp TGCCAATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCACAATGCCCAAGGGCTaGATGAACTACATAATCAAA +
Preference number: 2 (lower is better)
Translates to: CQCLHSCLLRRSQVKCVSTMPKG*MNYIIK
Trigger: TTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGT...GCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCATTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000632219.1
ENST00000632674.1
3UTR-3UTR CCA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCACAATGCCCAAGGGCTaGATGAACTACATAATCAAA +
Preference number: 2 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLTMPKG*MNYIIK
Trigger: TTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGT...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
3UTR-3UTR CCA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCTACAGCCTTCTTTACTaGTGTATAACAATGCCCAAG +
Preference number: 2 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLYSLLY*CITMPK
Trigger: CTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTA...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
3UTR-3UTR TCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAAACTGCAAGAAATCTaGGCCTTTCATAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQKLQEI*AFHSLA
Trigger: AGCAAGACTATGAAAGGCTCAGATTTCTTGCAGTTT...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
3UTR-3UTR TCA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCAAACTGCAAGAAATCTaGGCCTTTCATAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTKLQEI*AFHSLA
Trigger: AGCAAGACTATGAAAGGCTCAGATTTCTTGCAGTTT...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
3UTR TCA 72 bp ACAGGGACTCCATTTACACGTGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTGGGTTTTCGTCTAGCA +
Preference number: 3 (lower is better)
Translates to: TGTPFTRAHKPC*GLTGNVGFRLA
Trigger: TGCTAGACGAAAACCCACATTACCTGTTAGGCCTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
3UTR CCA 72 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTaGTGTATAACAATGCCCAAGGGCTGGATGAACTAC +
Preference number: 3 (lower is better)
Translates to: VSAPPLEYSLLY*CITMPKGWMNY
Trigger: GTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
3UTR TCA 72 bp AGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCTTaGGTACAGCCTTCTTTACTGGTGTATAACAATGCC +
Preference number: 3 (lower is better)
Translates to: RRSQVKCVSSSS*VQPSLLVYNNA
Trigger: GGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACACATTTCACTTGGCTGCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
3UTR-3UTR CAA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCCAGCTTTCTACAGACTaGGCCAAAATAGTACAACCT +
Preference number: 3 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIQLSTD*AKIVQP
Trigger: AGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTG...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTCGGTATGGGCCTTGGTaGGGGTCAGGCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHARYGPW*GSGQER
Trigger: CCGTTCCTGGCCTGACCCCCACCAAGGCCCATACCG...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCACGGTATGGGCCTTGGTaGGGGTCAGGCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPRYGPW*GSGQER
Trigger: CCGTTCCTGGCCTGACCCCCACCAAGGCCCATACCG...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCCGGTATGGGCCTTGGTaGGGGTCAGGCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLRYGPW*GSGQER
Trigger: CCGTTCCTGGCCTGACCCCCACCAAGGCCCATACCG...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp TGCCAATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCCGGTATGGGCCTTGGTaGGGGTCAGGCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: CQCLHSCLLRRSQVKCVSRYGPW*GSGQER
Trigger: CCGTTCCTGGCCTGACCCCCACCAAGGCCCATACCG...GCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCATTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000632219.1
ENST00000632674.1
CDS-3UTR TCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCACTGGATATCTGCTTCTaGGACCCGGTCAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPLDICF*DPVRGP
Trigger: CGGACCCCTGACCGGGTCTCAGAAGCAGATATCCAG...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCACTGGAACTCTCGACTaGACTCTGCAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPTGTLD*TLQCQG
Trigger: CCCCTGACACTGCAGAGTTCAGTCGAGAGTTCCAGT...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGACTGGAACTCTCGACTaGACTCTGCAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAETGTLD*TLQCQG
Trigger: CCCCTGACACTGCAGAGTTCAGTCGAGAGTTCCAGT...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCCAGGAACGGGCGAACTaGAGAGCTAGTGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLQERAN*RASASP
Trigger: GGGTGACGCACTAGCTCTCCAGTTCGCCCGTTCCTG...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTCGGTATGGGCCTTGGTaGGGGTCAGGCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAARYGPW*GSGQER
Trigger: CCGTTCCTGGCCTGACCCCCACCAAGGCCCATACCG...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCCGGTATGGGCCTTGGTaGGGGTCAGGCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTRYGPW*GSGQER
Trigger: CCGTTCCTGGCCTGACCCCCACCAAGGCCCATACCG...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCATTCCACTCGGGGCCTaGCAATGCCCAATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPIPLGA*QCPIAP
Trigger: TGGAGCAATTGGGCATTGCCAGGCCCCGAGTGGAAT...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTCATGGCCTGGTGAGCTaGATATTCCACTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAHGLVS*IFHSGP
Trigger: AGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATG...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACT +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEGIWRV*VPLILT
Trigger: AGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCC...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAENRTGI*RVWVPL
Trigger: CAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTT...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGCTCCACCTTCAATaGTCTGGGGGCCCACAAGAT +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAELHLQ*SGGPQD
Trigger: ATCTTGTGGGCCCCCAGAGCATTGAAGGTGGAGCTC...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCAGGAACGGGCGAACTaGAGAGCTAGTGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLQERAN*RASASP
Trigger: GGGTGACGCACTAGCTCTCCAGTTCGCCCGTTCCTG...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTATTCCACTCGGGGCCTaGCAATGCCCAATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAIPLGA*QCPIAP
Trigger: TGGAGCAATTGGGCATTGCCAGGCCCCGAGTGGAAT...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCACATGGCCTGGTGAGCTaGATATTCCACTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPHGLVS*IFHSGP
Trigger: AGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATG...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCCATGGCCTGGTGAGCTaGATATTCCACTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLHGLVS*IFHSGP
Trigger: AGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATG...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCCCACCTTCAATGCTCTaGGGGCCCACAAGATTCATG +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPPPSML*GPTRFM
Trigger: CATGAATCTTGTGGGCCCCCAGAGCATTGAAGGTGG...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHANRTGI*RVWVPL
Trigger: CAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTT...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCCCACTTGCCCAAGCCTaGATAGTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPPLAQA*IVMFRI
Trigger: GATCCGGAACATGACTATCCAGGCTTGGGCAAGTGG...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGCCACTTGCCCAAGCCTaGATAGTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEPLAQA*IVMFRI
Trigger: GATCCGGAACATGACTATCCAGGCTTGGGCAAGTGG...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTCTGGATATCTGCTTCTaGGACCCGGTCAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAALDICF*DPVRGP
Trigger: CGGACCCCTGACCGGGTCTCAGAAGCAGATATCCAG...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGGGTCTGGGTACCCCTaGTCCTCACTAAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAGSGYP*SSLKSL
Trigger: TAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCC...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTG +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEAHKPC*GLTGNV
Trigger: CACATTACCTGTTAGGCCTCAGCATGGCTTATGTGC...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCGTCAGCTCCTCCTCTTaGGTACAGCCTTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPVSSSS*VQPSLL
Trigger: CAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGAC...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAGAGCTCCACCTTCAATaGTCTGGGGGCCCACAAGAT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPELHLQ*SGGPQD
Trigger: ATCTTGTGGGCCCCCAGAGCATTGAAGGTGGAGCTC...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGGTCTCCAGTCAACTCTaGCACGATGTTGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEVSSQL*HDVGDV
Trigger: AACATCCCCAACATCGTGGCAGAGTTGACTGGAGAC...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCGTCTCCAGTCAACTCTaGCACGATGTTGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPVSSQL*HDVGDV
Trigger: AACATCCCCAACATCGTGGCAGAGTTGACTGGAGAC...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGCTCTCGACTGAACTCTaGAGTGTCAGGGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAELSTEL*SVRGVF
Trigger: GAAAACACCCCTGACACTGCAGAGTTCAGTCGAGAG...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAACAGGAACGGGCGAACTaGAGAGCTAGTGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQQERAN*RASASP
Trigger: GGGTGACGCACTAGCTCTCCAGTTCGCCCGTTCCTG...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAATTCCACTCGGGGCCTaGCAATGCCCAATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPIPLGA*QCPIAP
Trigger: TGGAGCAATTGGGCATTGCCAGGCCCCGAGTGGAAT...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCGGCCCACAAGATTCATaGCCTGGTGAGCTGGATATT +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPGPQDS*PGELDI
Trigger: AATATCCAGCTCACCAGGCCATGAATCTTGTGGGCC...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTCCACCTTCAATGCTCTaGGGGCCCACAAGATTCATG +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAPPSML*GPTRFM
Trigger: CATGAATCTTGTGGGCCCCCAGAGCATTGAAGGTGG...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCACTCTGCCACGATGTTaGGGATGTTGCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPTLPRC*GCCQKD
Trigger: GTCCTTTTGGCAACATCCCCAACATCGTGGCAGAGT...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPGIWRV*VPLILT
Trigger: AGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCC...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLNRTGI*RVWVPL
Trigger: CAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTT...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTCCACTTGCCCAAGCCTaGATAGTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAPLAQA*IVMFRI
Trigger: GATCCGGAACATGACTATCCAGGCTTGGGCAAGTGG...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCCTGGATATCTGCTTCTaGGACCCGGTCAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKILDICF*DPVRGP
Trigger: CGGACCCCTGACCGGGTCTCAGAAGCAGATATCCAG...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGCTGGATATCTGCTTCTaGGACCCGGTCAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLLDICF*DPVRGP
Trigger: CGGACCCCTGACCGGGTCTCAGAAGCAGATATCCAG...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGTGCTCCATAACACCATaGAGCAGCCTCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAECSITP*SSLWIS
Trigger: AGATATCCAGAGGCTGCTTCATGGTGTTATGGAGCA...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCTGCTCCATAACACCATaGAGCAGCCTCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPCSITP*SSLWIS
Trigger: AGATATCCAGAGGCTGCTTCATGGTGTTATGGAGCA...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAGGGTCTGGGTACCCCTaGTCCTCACTAAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPGSGYP*SSLKSL
Trigger: TAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCC...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTG +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAAHKPC*GLTGNV
Trigger: CACATTACCTGTTAGGCCTCAGCATGGCTTATGTGC...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp TGCCAATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCGAGCTCCACCTTCAATaGTCTGGGGGCCCACAAGAT +
Preference number: 4 (lower is better)
Translates to: CQCLHSCLLRRSQVKCVSELHLQ*SGGPQD
Trigger: ATCTTGTGGGCCCCCAGAGCATTGAAGGTGGAGCTC...GCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCATTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGCGATGTTGGGGATGTTaGCAAAAGGACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAERCWGC*QKDPNA
Trigger: AGCATTTGGGTCCTTTTGGCAACATCCCCAACATCG...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGTCTCCAGTCAACTCTaGCACGATGTTGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAVSSQL*HDVGDV
Trigger: AACATCCCCAACATCGTGGCAGAGTTGACTGGAGAC...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGTCAAAGAGATGCTGGTaGAACTGGAACTCTCGACTG +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAESKRCW*NWNSRL
Trigger: CAGTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGA...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGCAGGAACGGGCGAACTaGAGAGCTAGTGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLQERAN*RASASP
Trigger: GGGTGACGCACTAGCTCTCCAGTTCGCCCGTTCCTG...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCCAGGAACGGGCGAACTaGAGAGCTAGTGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIQERAN*RASASP
Trigger: GGGTGACGCACTAGCTCTCCAGTTCGCCCGTTCCTG...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATACGGTATGGGCCTTGGTaGGGGTCAGGCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIRYGPW*GSGQER
Trigger: CCGTTCCTGGCCTGACCCCCACCAAGGCCCATACCG...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTCATGGCCTGGTGAGCTaGATATTCCACTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAHGLVS*IFHSGP
Trigger: AGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATG...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCCATGGCCTGGTGAGCTaGATATTCCACTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTHGLVS*IFHSGP
Trigger: AGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATG...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAACATGGCCTGGTGAGCTaGATATTCCACTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQHGLVS*IFHSGP
Trigger: AGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATG...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGGCCCACAAGATTCATaGCCTGGTGAGCTGGATATT +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAGPQDS*PGELDI
Trigger: AATATCCAGCTCACCAGGCCATGAATCTTGTGGGCC...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCCCACCTTCAATGCTCTaGGGGCCCACAAGATTCATG +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLPPSML*GPTRFM
Trigger: CATGAATCTTGTGGGCCCCCAGAGCATTGAAGGTGG...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCACCACCTTCAATGCTCTaGGGGCCCACAAGATTCATG +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPPPSML*GPTRFM
Trigger: CATGAATCTTGTGGGCCCCCAGAGCATTGAAGGTGG...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTACTCTGCCACGATGTTaGGGATGTTGCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHATLPRC*GCCQKD
Trigger: GTCCTTTTGGCAACATCCCCAACATCGTGGCAGAGT...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLNRTGI*RVWVPL
Trigger: CAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTT...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCAGATGCTGGTGCAACTaGAACTCTCGACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPRCWCN*NSRLNS
Trigger: AGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCT...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGGGATCAAAGAGATGCTaGTGCAACTGGAACTCTCGA +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEGSKRC*CNWNSR
Trigger: TCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCC...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTACTGGAACTCTCGACTaGACTCTGCAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTITGTLD*TLQCQG
Trigger: CCCCTGACACTGCAGAGTTCAGTCGAGAGTTCCAGT...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAACTGGAACTCTCGACTaGACTCTGCAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQTGTLD*TLQCQG
Trigger: CCCCTGACACTGCAGAGTTCAGTCGAGAGTTCCAGT...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTG +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLAHKPC*GLTGNV
Trigger: CACATTACCTGTTAGGCCTCAGCATGGCTTATGTGC...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCGTCTCCAGTCAACTCTaGCACGATGTTGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLVSSQL*HDVGDV
Trigger: AACATCCCCAACATCGTGGCAGAGTTGACTGGAGAC...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCACTCTCGACTGAACTCTaGAGTGTCAGGGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPLSTEL*SVRGVF
Trigger: GAAAACACCCCTGACACTGCAGAGTTCAGTCGAGAG...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCCTCTCGACTGAACTCTaGAGTGTCAGGGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLLSTEL*SVRGVF
Trigger: GAAAACACCCCTGACACTGCAGAGTTCAGTCGAGAG...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTTCAAAGAGATGCTGGTaGAACTGGAACTCTCGACTG +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHASKRCW*NWNSRL
Trigger: CAGTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGA...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTTCCGGATCAAAGAGATaGTGGTGCAACTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHASGSKR*WCNWNS
Trigger: AGAGTTCCAGTTGCACCAGCATCTCTTTGATCCGGA...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCGTTTCTTGTTCCACTTaGCCAAGCCTGGATAGTCAT +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPVSCST*PSLDSH
Trigger: ATGACTATCCAGGCTTGGGCAAGTGGAACAAGAAAC...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTATTCCACTCGGGGCCTaGCAATGCCCAATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAIPLGA*QCPIAP
Trigger: TGGAGCAATTGGGCATTGCCAGGCCCCGAGTGGAAT...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCCATGGCCTGGTGAGCTaGATATTCCACTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIHGLVS*IFHSGP
Trigger: AGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATG...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAGGCCCACAAGATTCATaGCCTGGTGAGCTGGATATT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPGPQDS*PGELDI
Trigger: AATATCCAGCTCACCAGGCCATGAATCTTGTGGGCC...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAACTCTGCCACGATGTTaGGGATGTTGCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPTLPRC*GCCQKD
Trigger: GTCCTTTTGGCAACATCCCCAACATCGTGGCAGAGT...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCACTCTGCCACGATGTTaGGGATGTTGCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLTLPRC*GCCQKD
Trigger: GTCCTTTTGGCAACATCCCCAACATCGTGGCAGAGT...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACT +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQGIWRV*VPLILT
Trigger: AGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCC...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACT +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAGIWRV*VPLILT
Trigger: AGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCC...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTNRTGI*RVWVPL
Trigger: CAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTT...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAANRTGI*RVWVPL
Trigger: CAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTT...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGGATCAAAGAGATGCTaGTGCAACTGGAACTCTCGA +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAGSKRC*CNWNSR
Trigger: TCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCC...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCACTGGATATCTGCTTCTaGGACCCGGTCAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSLDICF*DPVRGP
Trigger: CGGACCCCTGACCGGGTCTCAGAAGCAGATATCCAG...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTCCATAACACCATaGAGCAGCCTCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPCSITP*SSLWIS
Trigger: AGATATCCAGAGGCTGCTTCATGGTGTTATGGAGCA...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTGGGTCTGGGTACCCCTaGTCCTCACTAAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAGSGYP*SSLKSL
Trigger: TAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCC...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCGGGTCTGGGTACCCCTaGTCCTCACTAAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTGSGYP*SSLKSL
Trigger: TAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCC...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCACTGGAACTCTCGACTaGACTCTGCAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVTGTLD*TLQCQG
Trigger: CCCCTGACACTGCAGAGTTCAGTCGAGAGTTCCAGT...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGATCCTTATCCTCATCTaGAAAATGGGGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEILILI*KMGDRL
Trigger: AAGTCTGTCCCCCATTTTTCAGATGAGGATAAGGAT...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCGAGCTCCACCTTCAATaGTCTGGGGGCCCACAAGAT +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIELHLQ*SGGPQD
Trigger: ATCTTGTGGGCCCCCAGAGCATTGAAGGTGGAGCTC...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCACGATGTTGGGGATGTTaGCAAAAGGACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPRCWGC*QKDPNA
Trigger: AGCATTTGGGTCCTTTTGGCAACATCCCCAACATCG...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATCCGGATCAAAGAGATaGTGGTGCAACTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPSGSKR*WCNWNS
Trigger: AGAGTTCCAGTTGCACCAGCATCTCTTTGATCCGGA...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCTCCGGATCAAAGAGATaGTGGTGCAACTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLSGSKR*WCNWNS
Trigger: AGAGTTCCAGTTGCACCAGCATCTCTTTGATCCGGA...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCGGGGACAGACTTCTTTaGAACAACATTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPGDRLL*NNIIQS
Trigger: AGACTGGATAATGTTGTTGCAAAGAAGTCTGTCCCC...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCATTCCACTCGGGGCCTaGCAATGCCCAATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIIPLGA*QCPIAP
Trigger: TGGAGCAATTGGGCATTGCCAGGCCCCGAGTGGAAT...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGATTCCACTCGGGGCCTaGCAATGCCCAATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLIPLGA*QCPIAP
Trigger: TGGAGCAATTGGGCATTGCCAGGCCCCGAGTGGAAT...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTCCACCTTCAATGCTCTaGGGGCCCACAAGATTCATG +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAPPSML*GPTRFM
Trigger: CATGAATCTTGTGGGCCCCCAGAGCATTGAAGGTGG...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAACCACCTTCAATGCTCTaGGGGCCCACAAGATTCATG +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQPPSML*GPTRFM
Trigger: CATGAATCTTGTGGGCCCCCAGAGCATTGAAGGTGG...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACT +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIGIWRV*VPLILT
Trigger: AGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCC...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACT +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLGIWRV*VPLILT
Trigger: AGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCC...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKINRTGI*RVWVPL
Trigger: CAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTT...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAAGATGCTGGTGCAACTaGAACTCTCGACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPRCWCN*NSRLNS
Trigger: AGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCT...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCGGATCAAAGAGATGCTaGTGCAACTGGAACTCTCGA +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLGSKRC*CNWNSR
Trigger: TCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCC...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTCCACTTGCCCAAGCCTaGATAGTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTIPLAQA*IVMFRI
Trigger: GATCCGGAACATGACTATCCAGGCTTGGGCAAGTGG...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGTCCTCATCTGAAAAATaGGGGACAGACTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAESSSEK*GTDFFA
Trigger: TGCAAAGAAGTCTGTCCCCCATTTTTCAGATGAGGA...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp TGCCAATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTGCTCCATAACACCATaGAGCAGCCTCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: CQCLHSCLLRRSQVKCVSCSITP*SSLWIS
Trigger: AGATATCCAGAGGCTGCTTCATGGTGTTATGGAGCA...GCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCATTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000632219.1
ENST00000632674.1
CDS-3UTR TCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGGGGTCTGGGTACCCCTaGTCCTCACTAAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLGSGYP*SSLKSL
Trigger: TAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCC...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTG +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTIAHKPC*GLTGNV
Trigger: CACATTACCTGTTAGGCCTCAGCATGGCTTATGTGC...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGCAGAATCATCGGTGTaGAGACAATACACTATCTAC +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAAESSV*RQYTIY
Trigger: GTAGATAGTGTATTGTCTTCACACCGATGATTCTGC...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGAAACTGCAAGAAATCTaGGCCTTTCATAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEKLQEI*AFHSLA
Trigger: AGCAAGACTATGAAAGGCTCAGATTTCTTGCAGTTT...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCAAACTGCAAGAAATCTaGGCCTTTCATAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPKLQEI*AFHSLA
Trigger: AGCAAGACTATGAAAGGCTCAGATTTCTTGCAGTTT...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAGTCAGCTCCTCCTCTTaGGTACAGCCTTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQVSSSS*VQPSLL
Trigger: CAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGAC...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCGATGTTGGGGATGTTaGCAAAAGGACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLRCWGC*QKDPNA
Trigger: AGCATTTGGGTCCTTTTGGCAACATCCCCAACATCG...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTGTCTCCAGTCAACTCTaGCACGATGTTGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTIVSSQL*HDVGDV
Trigger: AACATCCCCAACATCGTGGCAGAGTTGACTGGAGAC...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTGTCTCCAGTCAACTCTaGCACGATGTTGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAVSSQL*HDVGDV
Trigger: AACATCCCCAACATCGTGGCAGAGTTGACTGGAGAC...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTCTCTCGACTGAACTCTaGAGTGTCAGGGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAALSTEL*SVRGVF
Trigger: GAAAACACCCCTGACACTGCAGAGTTCAGTCGAGAG...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAGTTTCTTGTTCCACTTaGCCAAGCCTGGATAGTCAT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPVSCST*PSLDSH
Trigger: ATGACTATCCAGGCTTGGGCAAGTGGAACAAGAAAC...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGGGGACAGACTTCTTTaGAACAACATTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAGDRLL*NNIIQS
Trigger: AGACTGGATAATGTTGTTGCAAAGAAGTCTGTCCCC...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTGGCCCACAAGATTCATaGCCTGGTGAGCTGGATATT +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAGPQDS*PGELDI
Trigger: AATATCCAGCTCACCAGGCCATGAATCTTGTGGGCC...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTACTCTGCCACGATGTTaGGGATGTTGCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTITLPRC*GCCQKD
Trigger: GTCCTTTTGGCAACATCCCCAACATCGTGGCAGAGT...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCCCACTTGCCCAAGCCTaGATAGTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIPLAQA*IVMFRI
Trigger: GATCCGGAACATGACTATCCAGGCTTGGGCAAGTGG...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGCCACTTGCCCAAGCCTaGATAGTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLPLAQA*IVMFRI
Trigger: GATCCGGAACATGACTATCCAGGCTTGGGCAAGTGG...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCCCACTTGCCCAAGCCTaGATAGTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVPLAQA*IVMFRI
Trigger: GATCCGGAACATGACTATCCAGGCTTGGGCAAGTGG...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTTGCTCCATAACACCATaGAGCAGCCTCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTICSITP*SSLWIS
Trigger: AGATATCCAGAGGCTGCTTCATGGTGTTATGGAGCA...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTTGCTCCATAACACCATaGAGCAGCCTCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAACSITP*SSLWIS
Trigger: AGATATCCAGAGGCTGCTTCATGGTGTTATGGAGCA...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAACTGGAACTCTCGACTaGACTCTGCAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFITGTLD*TLQCQG
Trigger: CCCCTGACACTGCAGAGTTCAGTCGAGAGTTCCAGT...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCATCCTTATCCTCATCTaGAAAATGGGGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLILILI*KMGDRL
Trigger: AAGTCTGTCCCCCATTTTTCAGATGAGGATAAGGAT...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR TCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAATCCTTATCCTCATCTaGAAAATGGGGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPILILI*KMGDRL
Trigger: AAGTCTGTCCCCCATTTTTCAGATGAGGATAAGGAT...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAGCAGAATCATCGGTGTaGAGACAATACACTATCTAC +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPAESSV*RQYTIY
Trigger: GTAGATAGTGTATTGTCTTCACACCGATGATTCTGC...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCGTCAGCTCCTCCTCTTaGGTACAGCCTTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVVSSSS*VQPSLL
Trigger: CAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGAC...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCGTCAGCTCCTCCTCTTaGGTACAGCCTTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIVSSSS*VQPSLL
Trigger: CAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGAC...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGAGCTCCACCTTCAATaGTCTGGGGGCCCACAAGAT +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIELHLQ*SGGPQD
Trigger: ATCTTGTGGGCCCCCAGAGCATTGAAGGTGGAGCTC...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTCGATGTTGGGGATGTTaGCAAAAGGACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAARCWGC*QKDPNA
Trigger: AGCATTTGGGTCCTTTTGGCAACATCCCCAACATCG...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAACGATGTTGGGGATGTTaGCAAAAGGACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQRCWGC*QKDPNA
Trigger: AGCATTTGGGTCCTTTTGGCAACATCCCCAACATCG...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTCGATGTTGGGGATGTTaGCAAAAGGACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTIRCWGC*QKDPNA
Trigger: AGCATTTGGGTCCTTTTGGCAACATCCCCAACATCG...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCGTCTCCAGTCAACTCTaGCACGATGTTGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVVSSQL*HDVGDV
Trigger: AACATCCCCAACATCGTGGCAGAGTTGACTGGAGAC...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGCTCTCGACTGAACTCTaGAGTGTCAGGGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLLSTEL*SVRGVF
Trigger: GAAAACACCCCTGACACTGCAGAGTTCAGTCGAGAG...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTTCAAAGAGATGCTGGTaGAACTGGAACTCTCGACTG +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTISKRCW*NWNSRL
Trigger: CAGTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGA...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTTCAAAGAGATGCTGGTaGAACTGGAACTCTCGACTG +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAASKRCW*NWNSRL
Trigger: CAGTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGA...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAATCCGGATCAAAGAGATaGTGGTGCAACTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQSGSKR*WCNWNS
Trigger: AGAGTTCCAGTTGCACCAGCATCTCTTTGATCCGGA...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTTCCGGATCAAAGAGATaGTGGTGCAACTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAASGSKR*WCNWNS
Trigger: AGAGTTCCAGTTGCACCAGCATCTCTTTGATCCGGA...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCGGGGACAGACTTCTTTaGAACAACATTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLGDRLL*NNIIQS
Trigger: AGACTGGATAATGTTGTTGCAAAGAAGTCTGTCCCC...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAGGGGACAGACTTCTTTaGAACAACATTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPGDRLL*NNIIQS
Trigger: AGACTGGATAATGTTGTTGCAAAGAAGTCTGTCCCC...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR GCA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGGACACCATTTTAAACTaGAAGAAATCTGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEDTILN*KKSEPF
Trigger: GAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTC...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAATTCCACTCGGGGCCTaGCAATGCCCAATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSIPLGA*QCPIAP
Trigger: TGGAGCAATTGGGCATTGCCAGGCCCCGAGTGGAAT...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCGGCCCACAAGATTCATaGCCTGGTGAGCTGGATATT +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVGPQDS*PGELDI
Trigger: AATATCCAGCTCACCAGGCCATGAATCTTGTGGGCC...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGGGCCCACAAGATTCATaGCCTGGTGAGCTGGATATT +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLGPQDS*PGELDI
Trigger: AATATCCAGCTCACCAGGCCATGAATCTTGTGGGCC...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCACTCTGCCACGATGTTaGGGATGTTGCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVTLPRC*GCCQKD
Trigger: GTCCTTTTGGCAACATCCCCAACATCGTGGCAGAGT...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACT +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSGIWRV*VPLILT
Trigger: AGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCC...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSNRTGI*RVWVPL
Trigger: CAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTT...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTAGATGCTGGTGCAACTaGAACTCTCGACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAARCWCN*NSRLNS
Trigger: AGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCT...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCAGATGCTGGTGCAACTaGAACTCTCGACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTRCWCN*NSRLNS
Trigger: AGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCT...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAGATGCTGGTGCAACTaGAACTCTCGACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQRCWCN*NSRLNS
Trigger: AGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCT...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCGGATCAAAGAGATGCTaGTGCAACTGGAACTCTCGA +
Preference number: 4 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTGSKRC*CNWNSR
Trigger: TCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCC...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTGGATCAAAGAGATGCTaGTGCAACTGGAACTCTCGA +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTIGSKRC*CNWNSR
Trigger: TCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCC...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTGGATCAAAGAGATGCTaGTGCAACTGGAACTCTCGA +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAGSKRC*CNWNSR
Trigger: TCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCC...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCTCCTCATCTGAAAAATaGGGGACAGACTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLSSSEK*GTDFFA
Trigger: TGCAAAGAAGTCTGTCCCCCATTTTTCAGATGAGGA...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTTACAGCCTTCTTTACTaGTGTATAACAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAYSLLY*CITMPK
Trigger: CTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTA...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGTGCTCCATAACACCATaGAGCAGCCTCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLCSITP*SSLWIS
Trigger: AGATATCCAGAGGCTGCTTCATGGTGTTATGGAGCA...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTGCTCCATAACACCATaGAGCAGCCTCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVCSITP*SSLWIS
Trigger: AGATATCCAGAGGCTGCTTCATGGTGTTATGGAGCA...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGGGTCTGGGTACCCCTaGTCCTCACTAAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIGSGYP*SSLKSL
Trigger: TAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCC...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCATCCTTATCCTCATCTaGAAAATGGGGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLILILI*KMGDRL
Trigger: AAGTCTGTCCCCCATTTTTCAGATGAGGATAAGGAT...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR TCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCAAACTGCAAGAAATCTaGGCCTTTCATAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLKLQEI*AFHSLA
Trigger: AGCAAGACTATGAAAGGCTCAGATTTCTTGCAGTTT...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGCGATGTTGGGGATGTTaGCAAAAGGACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLRCWGC*QKDPNA
Trigger: AGCATTTGGGTCCTTTTGGCAACATCCCCAACATCG...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGTCAAAGAGATGCTGGTaGAACTGGAACTCTCGACTG +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLSKRCW*NWNSRL
Trigger: CAGTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGA...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCTCAAAGAGATGCTGGTaGAACTGGAACTCTCGACTG +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKISKRCW*NWNSRL
Trigger: CAGTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGA...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGTCCGGATCAAAGAGATaGTGGTGCAACTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLSGSKR*WCNWNS
Trigger: AGAGTTCCAGTTGCACCAGCATCTCTTTGATCCGGA...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCGGGGACAGACTTCTTTaGAACAACATTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLGDRLL*NNIIQS
Trigger: AGACTGGATAATGTTGTTGCAAAGAAGTCTGTCCCC...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGACACCATTTTAAACTaGAAGAAATCTGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: ETCCHSQGLHLHVHISHADTILN*KKSEPF
Trigger: GAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTC...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCACCACCTTCAATGCTCTaGGGGCCCACAAGATTCATG +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSPPSML*GPTRFM
Trigger: CATGAATCTTGTGGGCCCCCAGAGCATTGAAGGTGG...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCAGATGCTGGTGCAACTaGAACTCTCGACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIRCWCN*NSRLNS
Trigger: AGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCT...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGAGATGCTGGTGCAACTaGAACTCTCGACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLRCWCN*NSRLNS
Trigger: AGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCT...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCGGATCAAAGAGATGCTaGTGCAACTGGAACTCTCGA +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIGSKRC*CNWNSR
Trigger: TCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCC...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGGGATCAAAGAGATGCTaGTGCAACTGGAACTCTCGA +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLGSKRC*CNWNSR
Trigger: TCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCC...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATACCACTTGCCCAAGCCTaGATAGTCATGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIPLAQA*IVMFRI
Trigger: GATCCGGAACATGACTATCCAGGCTTGGGCAAGTGG...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCTACAGCCTTCTTTACTaGTGTATAACAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLYSLLY*CITMPK
Trigger: CTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTA...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR TCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTGCAGAATCATCGGTGTaGAGACAATACACTATCTAC +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTIAESSV*RQYTIY
Trigger: GTAGATAGTGTATTGTCTTCACACCGATGATTCTGC...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTGCAGAATCATCGGTGTaGAGACAATACACTATCTAC +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAAESSV*RQYTIY
Trigger: GTAGATAGTGTATTGTCTTCACACCGATGATTCTGC...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR TCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGTCAGCTCCTCCTCTTaGGTACAGCCTTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSVSSSS*VQPSLL
Trigger: CAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGAC...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATACTCTCGACTGAACTCTaGAGTGTCAGGGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFILSTEL*SVRGVF
Trigger: GAAAACACCCCTGACACTGCAGAGTTCAGTCGAGAG...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCACTCTCGACTGAACTCTaGAGTGTCAGGGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSLSTEL*SVRGVF
Trigger: GAAAACACCCCTGACACTGCAGAGTTCAGTCGAGAG...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCGTTTCTTGTTCCACTTaGCCAAGCCTGGATAGTCAT +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVVSCST*PSLDSH
Trigger: ATGACTATCCAGGCTTGGGCAAGTGGAACAAGAAAC...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCGTTTCTTGTTCCACTTaGCCAAGCCTGGATAGTCAT +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIVSCST*PSLDSH
Trigger: ATGACTATCCAGGCTTGGGCAAGTGGAACAAGAAAC...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR GCA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCGACACCATTTTAAACTaGAAGAAATCTGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLDTILN*KKSEPF
Trigger: GAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTC...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGGCCCACAAGATTCATaGCCTGGTGAGCTGGATATT +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIGPQDS*PGELDI
Trigger: AATATCCAGCTCACCAGGCCATGAATCTTGTGGGCC...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAACTCTGCCACGATGTTaGGGATGTTGCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSTLPRC*GCCQKD
Trigger: GTCCTTTTGGCAACATCCCCAACATCGTGGCAGAGT...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTTCCTCATCTGAAAAATaGGGGACAGACTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTISSSEK*GTDFFA
Trigger: TGCAAAGAAGTCTGTCCCCCATTTTTCAGATGAGGA...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAATCCTCATCTGAAAAATaGGGGACAGACTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQSSSEK*GTDFFA
Trigger: TGCAAAGAAGTCTGTCCCCCATTTTTCAGATGAGGA...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTTCCTCATCTGAAAAATaGGGGACAGACTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAASSSEK*GTDFFA
Trigger: TGCAAAGAAGTCTGTCCCCCATTTTTCAGATGAGGA...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CCA 90 bp TGCCAATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTACAGCCTTCTTTACTaGTGTATAACAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: CQCLHSCLLRRSQVKCVSYSLLY*CITMPK
Trigger: CTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTA...GCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCATTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000632219.1
ENST00000632674.1
CDS-3UTR TCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCGCAGAATCATCGGTGTaGAGACAATACACTATCTAC +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIAESSV*RQYTIY
Trigger: GTAGATAGTGTATTGTCTTCACACCGATGATTCTGC...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCACGATGTTGGGGATGTTaGCAAAAGGACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSRCWGC*QKDPNA
Trigger: AGCATTTGGGTCCTTTTGGCAACATCCCCAACATCG...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATACGATGTTGGGGATGTTaGCAAAAGGACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIRCWGC*QKDPNA
Trigger: AGCATTTGGGTCCTTTTGGCAACATCCCCAACATCG...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATATCAAAGAGATGCTGGTaGAACTGGAACTCTCGACTG +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFISKRCW*NWNSRL
Trigger: CAGTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGA...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCATCCGGATCAAAGAGATaGTGGTGCAACTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSSGSKR*WCNWNS
Trigger: AGAGTTCCAGTTGCACCAGCATCTCTTTGATCCGGA...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCGGGGACAGACTTCTTTaGAACAACATTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVGDRLL*NNIIQS
Trigger: AGACTGGATAATGTTGTTGCAAAGAAGTCTGTCCCC...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAAGATGCTGGTGCAACTaGAACTCTCGACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIRCWCN*NSRLNS
Trigger: AGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCT...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGTCCTCATCTGAAAAATaGGGGACAGACTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLSSSEK*GTDFFA
Trigger: TGCAAAGAAGTCTGTCCCCCATTTTTCAGATGAGGA...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTACAATGCCCAAGGGCTaGATGAACTACATAATCAAA +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTITMPKG*MNYIIK
Trigger: TTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGT...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAACAATGCCCAAGGGCTaGATGAACTACATAATCAAA +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQTMPKG*MNYIIK
Trigger: TTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGT...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCTACAGCCTTCTTTACTaGTGTATAACAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTYSLLY*CITMPK
Trigger: CTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTA...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAATACAGCCTTCTTTACTaGTGTATAACAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQYSLLY*CITMPK
Trigger: CTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTA...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTTACAGCCTTCTTTACTaGTGTATAACAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTIYSLLY*CITMPK
Trigger: CTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTA...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCAAACTGCAAGAAATCTaGGCCTTTCATAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: STTSDTILNCKKSEPFIVKLQEI*AFHSLA
Trigger: AGCAAGACTATGAAAGGCTCAGATTTCTTGCAGTTT...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGAAACTGCAAGAAATCTaGGCCTTTCATAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLKLQEI*AFHSLA
Trigger: AGCAAGACTATGAAAGGCTCAGATTTCTTGCAGTTT...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCACAATGCCCAAGGGCTaGATGAACTACATAATCAAA +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKITMPKG*MNYIIK
Trigger: TTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGT...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCTACAGCCTTCTTTACTaGTGTATAACAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIYSLLY*CITMPK
Trigger: CTTGGGCATTGTTATACACCAGTAAAGAAGGCTGTA...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAATCCTTATCCTCATCTaGAAAATGGGGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSILILI*KMGDRL
Trigger: AAGTCTGTCCCCCATTTTTCAGATGAGGATAAGGAT...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAATCCTTATCCTCATCTaGAAAATGGGGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIILILI*KMGDRL
Trigger: AAGTCTGTCCCCCATTTTTCAGATGAGGATAAGGAT...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGCAGAATCATCGGTGTaGAGACAATACACTATCTAC +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIAESSV*RQYTIY
Trigger: GTAGATAGTGTATTGTCTTCACACCGATGATTCTGC...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCGACACCATTTTAAACTaGAAGAAATCTGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIDTILN*KKSEPF
Trigger: GAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTC...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR TCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAAAACTGCAAGAAATCTaGGCCTTTCATAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSKLQEI*AFHSLA
Trigger: AGCAAGACTATGAAAGGCTCAGATTTCTTGCAGTTT...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CCA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAACAATGCCCAAGGGCTaGATGAACTACATAATCAAA +
Preference number: 4 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSTMPKG*MNYIIK
Trigger: TTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGT...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR GCA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGACACCATTTTAAACTaGAAGAAATCTGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIDTILN*KKSEPF
Trigger: GAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTC...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS CCA 90 bp CTTCATGAGCTCCACCTTCAATGCTCTGGGGGCCCACAAGATTCATaGCCTGGTGAGCTGGATATTCCACTCGGGGCCTGGCAATGCCCA +
Preference number: 5 (lower is better)
Translates to: LHELHLQCSGGPQDS*PGELDIPLGAWQCP
Trigger: TGGGCATTGCCAGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATGAATCTTGTGGGCCCCCAGAGCATTGAAGGTGGAGCTCATGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000471027.1
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633221.1
ENST00000633420.1
CDS CCA 90 bp GCCTGGGGAAGCCATCGCAGAAACCAAGGACAGACTTTCTGGGTGTaGCCCTTGTCACATGGACCAGTGTTTCTCAGGACTACACAAGGG +
Preference number: 5 (lower is better)
Translates to: AWGSHRRNQGQTFWV*PLSHGPVFLRTTQG
Trigger: CCCTTGTGTAGTCCTGAGAAACACTGGTCCATGTGACAAGGGCCACACCCAGAAAGTCTGTCCTTGGTTTCTGCGATGGCTTCCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498607.2
ENST00000633591.1
CDS TCA 90 bp CAATTGCTCCATAACACCATGAAGCAGCCTCTGGATATCTGCTTCTaGGACCCGGTCAGGGGTCCGGGGGCTGTAAGCAAATGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: QLLHNTMKQPLDICF*DPVRGPGAVSKCWS
Trigger: ACTCCAGCATTTGCTTACAGCCCCCGGACCCCTGACCGGGTCTCAGAAGCAGATATCCAGAGGCTGCTTCATGGTGTTATGGAGCAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000471027.1
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633221.1
ENST00000633420.1
CDS-3UTR CAA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGCCATCCTGGAGACCATaGTCAACCGAGGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEPSWRP*STEGQP
Trigger: GGGCTGCCCCTCGGTTGACAATGGTCTCCAGGATGG...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCCCATCCTGGAGACCATaGTCAACCGAGGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPPSWRP*STEGQP
Trigger: GGGCTGCCCCTCGGTTGACAATGGTCTCCAGGATGG...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS TCA 90 bp TCACATGGACCAGTGTTTCTCAGGACTACACAAGGGAGGATTCTGTaGCTTCCCAACAAGCGAGGGTTTCAGCCTGTTCACTGCCCCACT +
Preference number: 5 (lower is better)
Translates to: SHGPVFLRTTQGRIL*LPNKRGFQPVHCPT
Trigger: AGTGGGGCAGTGAACAGGCTGAAACCCTCGCTTGTTGGGAAGTCACAGAATCCTCCCTTGTGTAGTCCTGAGAAACACTGGTCCATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471027.1
ENST00000498607.2
ENST00000633221.1
ENST00000633591.1
CDS-3UTR CAA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCCAACAGGACAGGGATTaGGAGGGTCTGGGTACCCCT +
Preference number: 5 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPQQDRD*EGLGTP
Trigger: AGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTG...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS CCA 90 bp TCGCAGAAACCAAGGACAGACTTTCTGGGTGTGGCCCTTGTCACATaGACCAGTGTTTCTCAGGACTACACAAGGGAGGATTCTGTGACT +
Preference number: 5 (lower is better)
Translates to: SQKPRTDFLGVALVT*TSVSQDYTREDSVT
Trigger: AGTCACAGAATCCTCCCTTGTGTAGTCCTGAGAAACACTGGTCCATGTGACAAGGGCCACACCCAGAAAGTCTGTCCTTGGTTTCTGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498607.2
ENST00000633591.1
CDS-3UTR CAA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCCATCCTGGAGACCATaGTCAACCGAGGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLPSWRP*STEGQP
Trigger: GGGCTGCCCCTCGGTTGACAATGGTCTCCAGGATGG...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CAA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTCAACAGGACAGGGATTaGGAGGGTCTGGGTACCCCT +
Preference number: 5 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAQQDRD*EGLGTP
Trigger: AGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTG...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTCCATCCTGGAGACCATaGTCAACCGAGGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAPSWRP*STEGQP
Trigger: GGGCTGCCCCTCGGTTGACAATGGTCTCCAGGATGG...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCCCATCCTGGAGACCATaGTCAACCGAGGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTPSWRP*STEGQP
Trigger: GGGCTGCCCCTCGGTTGACAATGGTCTCCAGGATGG...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS TCA 90 bp GCTGTTTTTCCAACAGGACAGGGATTTGGAGGGTCTGGGTACCCCTaGTCCTCACTAAAGTCCTTAGGAATGTTGTCTCCAGTCAACTCT +
Preference number: 5 (lower is better)
Translates to: AVFPTGQGFGGSGYP*SSLKSLGMLSPVNS
Trigger: AGAGTTGACTGGAGACAACATTCCTAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTGGAAAAACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000471027.1
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000633221.1
ENST00000633420.1
CDS TCA 90 bp CATGTTCCGGATCAAAGAGATGCTGGTGCAACTGGAACTCTCGACTaGACTCTGCAGTGTCAGGGGTGTTTTCTAGACATCCATCATCTG +
Preference number: 5 (lower is better)
Translates to: HVPDQRDAGATGTLD*TLQCQGCFLDIHHL
Trigger: CAGATGATGGATGTCTAGAAAACACCCCTGACACTGCAGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCCGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000470349.5
ENST00000471027.1
ENST00000475752.1
ENST00000494364.5
ENST00000497208.5
ENST00000498069.5
ENST00000498607.2
ENST00000614359.1
ENST00000631581.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000632972.1
ENST00000633221.1
ENST00000633420.1
ENST00000633591.1
ENST00000633996.1
CDS CCA 90 bp TCCATCATCTGCTGTTTTTCCAACAGGACAGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACTAAAGTCCTTAGGAATGTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SIICCFSNRTGIWRV*VPLILTKVLRNVVS
Trigger: GGAGACAACATTCCTAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTGGAAAAACAGCAGATGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000471027.1
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000633221.1
ENST00000633420.1
CDS-3UTR CAA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGCCTGGCAATGCCCAATaGCTCCATAACACCATGAAG +
Preference number: 5 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEPGNAQ*LHNTMK
Trigger: CTTCATGGTGTTATGGAGCAATTGGGCATTGCCAGG...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGACGATGTTGGGGATGTaGCCAAAAGGACCCAAATGC +
Preference number: 5 (lower is better)
Translates to: TCCHSQGLHLHVHISHAETMLGM*PKGPKC
Trigger: GCATTTGGGTCCTTTTGGCAACATCCCCAACATCGT...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCAACTCTGCCACGATGTaGGGGATGTTGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPNSATM*GMLPKG
Trigger: TCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTT...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS TCA 90 bp TCTGTTTTTCCAACAGGACAGGGATTTGGAGGGTCTGGGTACCCCTaGTCCTCACTAAAGTCCTTAGGAATGTTGTCTCCAGTCAACTCT +
Preference number: 5 (lower is better)
Translates to: SVFPTGQGFGGSGYP*SSLKSLGMLSPVNS
Trigger: AGAGTTGACTGGAGACAACATTCCTAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTGGAAAAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000413748.6
ENST00000470349.5
ENST00000494364.5
ENST00000498069.5
ENST00000631581.1
ENST00000632674.1
ENST00000632955.1
ENST00000633996.1
CDS GCA 90 bp CTGATCCTCACTAAAGTCCTTAGGAATGTTGTCTCCAGTCAACTCTaGCACGATGTTGGGGATGTTGCCAAAAGGACCCAAATGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LILTKVLRNVVSSQL*HDVGDVAKRTQMLK
Trigger: CTTCAGCATTTGGGTCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTTGACTGGAGACAACATTCCTAAGGACTTTAGTGAGGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000470349.5
ENST00000471027.1
ENST00000494364.5
ENST00000497208.5
ENST00000498069.5
ENST00000614359.1
ENST00000631581.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633221.1
ENST00000633420.1
ENST00000633996.1
CDS CCA 90 bp ACATCCATCATCTGTTTTTCCAACAGGACAGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACTAAAGTCCTTAGGAATGTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TSIICFSNRTGIWRV*VPLILTKVLRNVVS
Trigger: GGAGACAACATTCCTAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTGGAAAAACAGATGATGGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000413748.6
ENST00000470349.5
ENST00000494364.5
ENST00000498069.5
ENST00000631581.1
ENST00000632674.1
ENST00000632955.1
ENST00000633996.1
CDS-3UTR CAA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGAAGTCCTTAGGAATGTaGTCTCCAGTCAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEKSLGM*SPVNSA
Trigger: GGCAGAGTTGACTGGAGACAACATTCCTAAGGACTT...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTCAACAGGACAGGGATTaGGAGGGTCTGGGTACCCCT +
Preference number: 5 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAQQDRD*EGLGTP
Trigger: AGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTG...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCCAACAGGACAGGGATTaGGAGGGTCTGGGTACCCCT +
Preference number: 5 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTQQDRD*EGLGTP
Trigger: AGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTG...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAACAACAGGACAGGGATTaGGAGGGTCTGGGTACCCCT +
Preference number: 5 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQQQDRD*EGLGTP
Trigger: AGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTG...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGCCTTGTAGATATGGATaGACACTCCTCCGCTTTCGT +
Preference number: 5 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEPCRYG*TLLRFR
Trigger: ACGAAAGCGGAGGAGTGTCAATCCATATCTACAAGG...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CAA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCTGTCAGCTCCTCCTCTaGAGTACAGCCTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPCQLLL*STAFFT
Trigger: AGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACA...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGTGTCAGCTCCTCCTCTaGAGTACAGCCTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: TCCHSQGLHLHVHISHAECQLLL*STAFFT
Trigger: AGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACA...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGCCTTGTAGATATGGATaGACACTCCACTTGCCCAAG +
Preference number: 5 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEPCRYG*TLHLPK
Trigger: CTTGGGCAAGTGGAGTGTCAATCCATATCTACAAGG...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494364.5
ENST00000497208.5
ENST00000632955.1
ENST00000633420.1
CDS TCA 90 bp CTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTaGGGCCTAACAGGTAATGTGGGTTTTCGTCTAGCATCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LSFTGTPFTRAHKPC*GLTGNVGFRLASSL
Trigger: AAGAGAAGATGCTAGACGAAAACCCACATTACCTGTTAGGCCTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000475752.1
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000632972.1
ENST00000633420.1
CDS-3UTR CAA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCCCTGGCAATGCCCAATaGCTCCATAACACCATGAAG +
Preference number: 5 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLPGNAQ*LHNTMK
Trigger: CTTCATGGTGTTATGGAGCAATTGGGCATTGCCAGG...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CAA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCACCTGGCAATGCCCAATaGCTCCATAACACCATGAAG +
Preference number: 5 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPPGNAQ*LHNTMK
Trigger: CTTCATGGTGTTATGGAGCAATTGGGCATTGCCAGG...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAACGATGTTGGGGATGTaGCCAAAAGGACCCAAATGC +
Preference number: 5 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPTMLGM*PKGPKC
Trigger: GCATTTGGGTCCTTTTGGCAACATCCCCAACATCGT...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAAACTCTGCCACGATGTaGGGGATGTTGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPNSATM*GMLPKG
Trigger: TCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTT...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp CTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAATCCAACAGGACAGGGATTaGGAGGGTCTGGGTACCCCT +
Preference number: 5 (lower is better)
Translates to: LYWCITMPKGWMNYIIKIQQDRD*EGLGTP
Trigger: AGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTG...GATTTTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTCCTTGTAGATATGGATaGACACTCCTCCGCTTTCGT +
Preference number: 5 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAPCRYG*TLLRFR
Trigger: ACGAAAGCGGAGGAGTGTCAATCCATATCTACAAGG...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CAA 90 bp GAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTCCTTGTAGATATGGATaGACACTCCACTTGCCCAAG +
Preference number: 5 (lower is better)
Translates to: ETCCHSQGLHLHVHISHAPCRYG*TLHLPK
Trigger: CTTGGGCAAGTGGAGTGTCAATCCATATCTACAAGG...AGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494364.5
ENST00000497208.5
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp TGCCAATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCCCTGGCAATGCCCAATaGCTCCATAACACCATGAAG +
Preference number: 5 (lower is better)
Translates to: CQCLHSCLLRRSQVKCVSPGNAQ*LHNTMK
Trigger: CTTCATGGTGTTATGGAGCAATTGGGCATTGCCAGG...GCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCATTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CAA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCAAAGTCCTTAGGAATGTaGTCTCCAGTCAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPKSLGM*SPVNSA
Trigger: GGCAGAGTTGACTGGAGACAACATTCCTAAGGACTT...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp GTGTCAGCTCCTCCTCTTGAGTACAGCCTTCTTTACTGGTGTATAACAATGCCCCAGCTTTCTACAGACTaGGCCAAAATAGTACAACCT +
Preference number: 5 (lower is better)
Translates to: VSAPPLEYSLLYWCITMPQLSTD*AKIVQP
Trigger: AGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTG...GGGCATTGTTATACACCAGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp ACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGCTGAGCAGCTTTCTACAGACTaGGCCAAAATAGTACAACCT +
Preference number: 5 (lower is better)
Translates to: TCCHSQGLHLHVHISHAEQLSTD*AKIVQP
Trigger: AGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTG...CTCAGCATGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp CTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCCTCTGTCAGCTCCTCCTCTaGAGTACAGCCTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: LAFMFIKTQPSEMCQLLLCQLLL*STAFFT
Trigger: AGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACA...GAGGAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CAA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCATGTCAGCTCCTCCTCTaGAGTACAGCCTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPCQLLL*STAFFT
Trigger: AGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACA...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp GTAAGAAACATGCTGTCATTCACAGGGACTCCATTTACACGTGCACATAAGCCACCTTGTAGATATGGATaGACACTCCACTTGCCCAAG +
Preference number: 5 (lower is better)
Translates to: VRNMLSFTGTPFTRAHKPPCRYG*TLHLPK
Trigger: CTTGGGCAAGTGGAGTGTCAATCCATATCTACAAGG...TGGCTTATGTGCACGTGTAAATGGAGTCCCTGTGAATGACAGCATGTTTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494364.5
ENST00000497208.5
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAACCTGGCAATGCCCAATaGCTCCATAACACCATGAAG +
Preference number: 5 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQPGNAQ*LHNTMK
Trigger: CTTCATGGTGTTATGGAGCAATTGGGCATTGCCAGG...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTACGATGTTGGGGATGTaGCCAAAAGGACCCAAATGC +
Preference number: 5 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAATMLGM*PKGPKC
Trigger: GCATTTGGGTCCTTTTGGCAACATCCCCAACATCGT...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCACGATGTTGGGGATGTaGCCAAAAGGACCCAAATGC +
Preference number: 5 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTTMLGM*PKGPKC
Trigger: GCATTTGGGTCCTTTTGGCAACATCCCCAACATCGT...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAACGATGTTGGGGATGTaGCCAAAAGGACCCAAATGC +
Preference number: 5 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQTMLGM*PKGPKC
Trigger: GCATTTGGGTCCTTTTGGCAACATCCCCAACATCGT...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTAACTCTGCCACGATGTaGGGGATGTTGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAANSATM*GMLPKG
Trigger: TCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTT...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAAAACTCTGCCACGATGTaGGGGATGTTGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQNSATM*GMLPKG
Trigger: TCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTT...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCAACTCTGCCACGATGTaGGGGATGTTGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTNSATM*GMLPKG
Trigger: TCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTT...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp ATGCTTGCATTCATGTTTATTAAGACGCAGCCAAGTGAAATGTGTCAGCTCCTCAAGTCCTTAGGAATGTaGTCTCCAGTCAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: MLAFMFIKTQPSEMCQLLKSLGM*SPVNSA
Trigger: GGCAGAGTTGACTGGAGACAACATTCCTAAGGACTT...GAGGAGCTGACACATTTCACTTGGCTGCGTCTTAATAAACATGAATGCAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CAA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCACAACAGGACAGGGATTaGGAGGGTCTGGGTACCCCT +
Preference number: 5 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSQQDRD*EGLGTP
Trigger: AGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTG...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGCCTGGCAATGCCCAATaGCTCCATAACACCATGAAG +
Preference number: 5 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLPGNAQ*LHNTMK
Trigger: CTTCATGGTGTTATGGAGCAATTGGGCATTGCCAGG...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCCCTGGCAATGCCCAATaGCTCCATAACACCATGAAG +
Preference number: 5 (lower is better)
Translates to: STTSDTILNCKKSEPFIVPGNAQ*LHNTMK
Trigger: CTTCATGGTGTTATGGAGCAATTGGGCATTGCCAGG...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGACGATGTTGGGGATGTaGCCAAAAGGACCCAAATGC +
Preference number: 5 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLTMLGM*PKGPKC
Trigger: GCATTTGGGTCCTTTTGGCAACATCCCCAACATCGT...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCAACTCTGCCACGATGTaGGGGATGTTGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: STTSDTILNCKKSEPFIVNSATM*GMLPKG
Trigger: TCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTT...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGAACTCTGCCACGATGTaGGGGATGTTGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLNSATM*GMLPKG
Trigger: TCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTT...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp GCAAAAAGCAGAATCATCGGTGTGAAGACAATACACTATCTACATACAGCTGCTAAGTCCTTAGGAATGTaGTCTCCAGTCAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: AKSRIIGVKTIHYLHTAAKSLGM*SPVNSA
Trigger: GGCAGAGTTGACTGGAGACAACATTCCTAAGGACTT...AGCAGCTGTATGTAGATAGTGTATTGTCTTCACACCGATGATTCTGCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633420.1
CDS-3UTR CAA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTTGTCAGCTCCTCCTCTaGAGTACAGCCTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTICQLLL*STAFFT
Trigger: AGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACA...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTCCTTGTAGATATGGATaGACACTCCACTTGCCCAAG +
Preference number: 5 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTIPCRYG*TLHLPK
Trigger: CTTGGGCAAGTGGAGTGTCAATCCATATCTACAAGG...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494364.5
ENST00000632955.1
CDS-3UTR CAA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGAAGTCCTTAGGAATGTaGTCTCCAGTCAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLKSLGM*SPVNSA
Trigger: GGCAGAGTTGACTGGAGACAACATTCCTAAGGACTT...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp ACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTTGCCTTGTAGATATGGATaGACACTCCTCCGCTTTCGT +
Preference number: 5 (lower is better)
Translates to: TTSDTILNCKKSEPFIVLPCRYG*TLLRFR
Trigger: ACGAAAGCGGAGGAGTGTCAATCCATATCTACAAGG...CAAGACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CAA 90 bp AGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATAGTCTGTCAGCTCCTCCTCTaGAGTACAGCCTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: STTSDTILNCKKSEPFIVCQLLL*STAFFT
Trigger: AGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACA...GACTATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATACCTGGCAATGCCCAATaGCTCCATAACACCATGAAG +
Preference number: 5 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIPGNAQ*LHNTMK
Trigger: CTTCATGGTGTTATGGAGCAATTGGGCATTGCCAGG...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp AATCAAAATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAAACTCTGCCACGATGTaGGGGATGTTGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: NQNQMTAFYRLGQNSTTSNSATM*GMLPKG
Trigger: TCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTT...TGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp AATCAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCCAGCTTTCTACAGACTaGGCCAAAATAGTACAACCT +
Preference number: 5 (lower is better)
Translates to: NQMTAFYRLGQNSTTSDTQLSTD*AKIVQP
Trigger: AGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTG...GGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp CCTTCTTTACTGGTGTATAACAATGCCCAAGGGCTGGATGAACTACATAATCAACAGCTTTCTACAGACTaGGCCAAAATAGTACAACCT +
Preference number: 5 (lower is better)
Translates to: PSLLVYNNAQGLDELHNQQLSTD*AKIVQP
Trigger: AGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTG...TTGATTATGTAGTTCATCCAGCCCTTGGGCATTGTTATACACCAGTAAAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp CAAATGACAGCTTTCTACAGACTTGGCCAAAATAGTACAACCTCAGACACCATTCAGCTTTCTACAGACTaGGCCAAAATAGTACAACCT +
Preference number: 5 (lower is better)
Translates to: QMTAFYRLGQNSTTSDTIQLSTD*AKIVQP
Trigger: AGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTG...AATGGTGTCTGAGGTTGTACTATTTTGGCCAAGTCTGTAGAAAGCTGTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS-3UTR CAA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATACCTTGTAGATATGGATaGACACTCCTCCGCTTTCGT +
Preference number: 5 (lower is better)
Translates to: NSTTSDTILNCKKSEPFIPCRYG*TLLRFR
Trigger: ACGAAAGCGGAGGAGTGTCAATCCATATCTACAAGG...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
CDS-3UTR CAA 90 bp AATAGTACAACCTCAGACACCATTTTAAACTGCAAGAAATCTGAGCCTTTCATATGTCAGCTCCTCCTCTaGAGTACAGCCTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: NSTTSDTILNCKKSEPFICQLLL*STAFFT
Trigger: AGTAAAGAAGGCTGTACTCAAGAGGAGGAGCTGACA...TATGAAAGGCTCAGATTTCTTGCAGTTTAAAATGGTGTCTGAGGTTGTACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000494364.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
CDS CCA 72 bp CTCCACCTTCAATGCTCTGGGGGCCCACAAGATTCATaGCCTGGTGAGCTGGATATTCCACTCGGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LHLQCSGGPQDS*PGELDIPLGAW
Trigger: CCAGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATGAATCTTGTGGGCCCCCAGAGCATTGAAGGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000471027.1
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633221.1
ENST00000633420.1
CDS TCA 72 bp CATAACACCATGAAGCAGCCTCTGGATATCTGCTTCTaGGACCCGGTCAGGGGTCCGGGGGCTGTAAGCAAA +
Preference number: 6 (lower is better)
Translates to: HNTMKQPLDICF*DPVRGPGAVSK
Trigger: TTTGCTTACAGCCCCCGGACCCCTGACCGGGTCTCAGAAGCAGATATCCAGAGGCTGCTTCATGGTGTTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000471027.1
ENST00000494364.5
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633221.1
ENST00000633420.1
CDS CCA 72 bp CCAAGGACAGACTTTCTGGGTGTGGCCCTTGTCACATaGACCAGTGTTTCTCAGGACTACACAAGGGAGGAT +
Preference number: 6 (lower is better)
Translates to: PRTDFLGVALVT*TSVSQDYTRED
Trigger: ATCCTCCCTTGTGTAGTCCTGAGAAACACTGGTCCATGTGACAAGGGCCACACCCAGAAAGTCTGTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498607.2
ENST00000633591.1
CDS CAA 90 bp GGAAGCCATCGCAGAAACCAAGGACAGACTTTCTGGGTGTGGCCCTaGTCACATGGACCAGTGTTTCTCAGGACTACACAAGGGAGGATT +
Preference number: 6 (lower is better)
Translates to: GSHRRNQGQTFWVWP*SHGPVFLRTTQGRI
Trigger: AATCCTCCCTTGTGTAGTCCTGAGAAACACTGGTCCATGTGACAAGGGCCACACCCAGAAAGTCTGTCCTTGGTTTCTGCGATGGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498607.2
ENST00000633591.1
CDS TCA 72 bp CCAGTGTTTCTCAGGACTACACAAGGGAGGATTCTGTaGCTTCCCAACAAGCGAGGGTTTCAGCCTGTTCAC +
Preference number: 6 (lower is better)
Translates to: PVFLRTTQGRIL*LPNKRGFQPVH
Trigger: GTGAACAGGCTGAAACCCTCGCTTGTTGGGAAGTCACAGAATCCTCCCTTGTGTAGTCCTGAGAAACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471027.1
ENST00000498607.2
ENST00000633221.1
ENST00000633591.1
CDS CAA 72 bp CGCAGAAACCAAGGACAGACTTTCTGGGTGTGGCCCTaGTCACATGGACCAGTGTTTCTCAGGACTACACAA +
Preference number: 6 (lower is better)
Translates to: RRNQGQTFWVWP*SHGPVFLRTTQ
Trigger: TTGTGTAGTCCTGAGAAACACTGGTCCATGTGACAAGGGCCACACCCAGAAAGTCTGTCCTTGGTTTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498607.2
ENST00000633591.1
CDS CCA 72 bp TCCATCATCTGCTGTTTTTCCAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTGATCCTCACTAAAGTC +
Preference number: 6 (lower is better)
Translates to: SIICCFSNRTGI*RVWVPLILTKV
Trigger: GACTTTAGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTGGAAAAACAGCAGATGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000471027.1
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000633221.1
ENST00000633420.1
CDS TCA 72 bp GATCAAAGAGATGCTGGTGCAACTGGAACTCTCGACTaGACTCTGCAGTGTCAGGGGTGTTTTCTAGACATC +
Preference number: 6 (lower is better)
Translates to: DQRDAGATGTLD*TLQCQGCFLDI
Trigger: GATGTCTAGAAAACACCCCTGACACTGCAGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000470349.5
ENST00000471027.1
ENST00000475752.1
ENST00000494364.5
ENST00000497208.5
ENST00000498069.5
ENST00000498607.2
ENST00000614359.1
ENST00000631581.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000632972.1
ENST00000633221.1
ENST00000633420.1
ENST00000633591.1
ENST00000633996.1
CDS CCA 72 bp TGCTGTTTTTCCAACAGGACAGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACTAAAGTCCTTAGGAAT +
Preference number: 6 (lower is better)
Translates to: CCFSNRTGIWRV*VPLILTKVLRN
Trigger: ATTCCTAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTGGAAAAACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300175.8
ENST00000471027.1
ENST00000497208.5
ENST00000614359.1
ENST00000632219.1
ENST00000633221.1
ENST00000633420.1
CDS CCA 72 bp CTCGTAAAGGAGTTTCTTGTTCCACTTGCCCAAGCCTaGATAGTCATGTTCCGGATCAAAGAGATGCTGGTG +
Preference number: 6 (lower is better)
Translates to: LVKEFLVPLAQA*IVMFRIKEMLV
Trigger: CACCAGCATCTCTTTGATCCGGAACATGACTATCCAGGCTTGGGCAAGTGGAACAAGAAACTCCTTTACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000470349.5
ENST00000471027.1
ENST00000475752.1
ENST00000498069.5
ENST00000498607.2
ENST00000614359.1
ENST00000631581.1
ENST00000632219.1
ENST00000632674.1
ENST00000632972.1
ENST00000633221.1
ENST00000633591.1
ENST00000633996.1
CDS CCA 72 bp ACATCCATCATCTGTTTTTCCAACAGGACAGGGATTTaGAGGGTCTGGGTACCCCTGATCCTCACTAAAGTC +
Preference number: 6 (lower is better)
Translates to: TSIICFSNRTGI*RVWVPLILTKV
Trigger: GACTTTAGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTGGAAAAACAGATGATGGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000413748.6
ENST00000470349.5
ENST00000494364.5
ENST00000498069.5
ENST00000631581.1
ENST00000632674.1
ENST00000632955.1
ENST00000633996.1
CDS GCA 72 bp ACTAAAGTCCTTAGGAATGTTGTCTCCAGTCAACTCTaGCACGATGTTGGGGATGTTGCCAAAAGGACCCAA +
Preference number: 6 (lower is better)
Translates to: TKVLRNVVSSQL*HDVGDVAKRTQ
Trigger: TTGGGTCCTTTTGGCAACATCCCCAACATCGTGGCAGAGTTGACTGGAGACAACATTCCTAAGGACTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000470349.5
ENST00000471027.1
ENST00000494364.5
ENST00000497208.5
ENST00000498069.5
ENST00000614359.1
ENST00000631581.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000633221.1
ENST00000633420.1
ENST00000633996.1
CDS CCA 72 bp ATCTGTTTTTCCAACAGGACAGGGATTTGGAGGGTCTaGGTACCCCTGATCCTCACTAAAGTCCTTAGGAAT +
Preference number: 6 (lower is better)
Translates to: ICFSNRTGIWRV*VPLILTKVLRN
Trigger: ATTCCTAAGGACTTTAGTGAGGATCAGGGGTACCCAGACCCTCCAAATCCCTGTCCTGTTGGAAAAACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000413748.6
ENST00000470349.5
ENST00000494364.5
ENST00000498069.5
ENST00000631581.1
ENST00000632674.1
ENST00000632955.1
ENST00000633996.1
CDS CAA 90 bp GGGGGAAGCAATACACATTTCCTGAACGGAATGGAGTTGCTAGAATaGCTACAGACTGCGCGTTCCACTAAAAATCATCTGCTAAAGCCT +
Preference number: 6 (lower is better)
Translates to: GGSNTHFLNGMELLE*LQTARSTKNHLLKP
Trigger: AGGCTTTAGCAGATGATTTTTAGTGGAACGCGCAGTCTGTAGCAATTCTAGCAACTCCATTCCGTTCAGGAAATGTGTATTGCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498607.2
CDS CAA 72 bp AATACACATTTCCTGAACGGAATGGAGTTGCTAGAATaGCTACAGACTGCGCGTTCCACTAAAAATCATCTG +
Preference number: 6 (lower is better)
Translates to: NTHFLNGMELLE*LQTARSTKNHL
Trigger: CAGATGATTTTTAGTGGAACGCGCAGTCTGTAGCAATTCTAGCAACTCCATTCCGTTCAGGAAATGTGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498607.2
CDS TCA 72 bp AGCATCTTCTCTTTACTCTGGATCCTTATCCTCATCTaGAAAATGGGGGACAGACTTCTTTGCAACAACATT +
Preference number: 6 (lower is better)
Translates to: SIFSLLWILILI*KMGDRLLCNNI
Trigger: AATGTTGTTGCAAAGAAGTCTGTCCCCCATTTTTCAGATGAGGATAAGGATCCAGAGTAAAGAGAAGATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000475752.1
ENST00000494364.5
ENST00000497208.5
ENST00000498069.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000632972.1
ENST00000633420.1
ENST00000633996.1
CDS CCA 72 bp TCTCTTTACTCTGGATCCTTATCCTCATCTGAAAAATaGGGGACAGACTTCTTTGCAACAACATTATCCAGT +
Preference number: 6 (lower is better)
Translates to: SLYSGSLSSSEK*GTDFFATTLSS
Trigger: ACTGGATAATGTTGTTGCAAAGAAGTCTGTCCCCCATTTTTCAGATGAGGATAAGGATCCAGAGTAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000300175.8
ENST00000413748.6
ENST00000475752.1
ENST00000494364.5
ENST00000497208.5
ENST00000498069.5
ENST00000614359.1
ENST00000632219.1
ENST00000632674.1
ENST00000632955.1
ENST00000632972.1
ENST00000633420.1
ENST00000633996.1