RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCFD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184178

Ensembl transcript IDs: ENST00000388940.8, ENST00000401642.8, ENST00000503450.1, ENST00000611795.1

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAATCAACCACCTTCCCACTACAGTTCCAAGTAGCCTGGCAGACCTaGCCAGTGGGCCAGCTAGAACAATGCAGTCCTTTGTTATGGCAG +
Preference number: 1 (lower is better)
Translates to: QSTTFPLQFQVAWQT*PVGQLEQCSPLLWQ
Trigger: CTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCCCACTGGGCAGGTCTGCCAGGCTACTTGGAACTGTAGTGGGAAGGTGGTTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CCA 90 bp CAGACCTGCCCAGTGGGCCAGCTAGAACAATGCAGTCCTTTGTTATaGCAGGATGATTTACAACACATGCAGGCTACCAGCACTGCCCCA +
Preference number: 1 (lower is better)
Translates to: QTCPVGQLEQCSPLL*QDDLQHMQATSTAP
Trigger: TGGGGCAGTGCTGGTAGCCTGCATGTGTTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCCCACTGGGCAGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CCA 90 bp ATAACCCTCCAATCAACCACCTTCCCACTACAGTTCCAAGTAGCCTaGCAGACCTGCCCAGTGGGCCAGCTAGAACAATGCAGTCCTTTG +
Preference number: 1 (lower is better)
Translates to: ITLQSTTFPLQFQVA*QTCPVGQLEQCSPL
Trigger: CAAAGGACTGCATTGTTCTAGCTGGCCCACTGGGCAGGTCTGCCAGGCTACTTGGAACTGTAGTGGGAAGGTGGTTGATTGGAGGGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR GCA 90 bp TTCCAAGTAGCCTGGCAGACCTGCCCAGTGGGCCAGCTAGAACAATaGAGTCCTTTGTTATGGCAGGATGATTTACAACACATGCAGGCT +
Preference number: 1 (lower is better)
Translates to: FQVAWQTCPVGQLEQ*SPLLWQDDLQHMQA
Trigger: AGCCTGCATGTGTTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCCCACTGGGCAGGTCTGCCAGGCTACTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR GCA 90 bp GATGCCAGAAACTTCCATCGACCATACACCTACAAACATGTGGGTTaGAAGTGGTTCGTTTTTGCCCTGGAGTTCTTACAAAGTTTCACT +
Preference number: 1 (lower is better)
Translates to: DARNFHRPYTYKHVG*KWFVFALEFLQSFT
Trigger: AGTGAAACTTTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CCA 90 bp TGTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATaGAAACGATCACTAATTGGACTCGCCAAAAGACAGACTGTCGCC +
Preference number: 1 (lower is better)
Translates to: CRWNQEDHKQRVKDK*KRSLIGLAKRQTVA
Trigger: GGCGACAGTCTGTCTTTTGGCGAGTCCAATTAGTGATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATTCCACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CCA 90 bp CATACACCTACAAACATGTGGGTTGCAAGTGGTTCGTTTTTGCCCTaGAGTTCTTACAAAGTTTCACTAGGTGGGTCTAGGTTTTTCTGC +
Preference number: 1 (lower is better)
Translates to: HTPTNMWVASGSFLP*SSYKVSLGGSRFFC
Trigger: GCAGAAAAACCTAGACCCACCTAGTGAAACTTTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CCA 90 bp AGAAACTTCCATCGACCATACACCTACAAACATGTGGGTTGCAAGTaGTTCGTTTTTGCCCTGGAGTTCTTACAAAGTTTCACTAGGTGG +
Preference number: 1 (lower is better)
Translates to: RNFHRPYTYKHVGCK*FVFALEFLQSFTRW
Trigger: CCACCTAGTGAAACTTTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CCA 90 bp ACATGGATGCCAGAAACTTCCATCGACCATACACCTACAAACATGTaGGTTGCAAGTGGTTCGTTTTTGCCCTGGAGTTCTTACAAAGTT +
Preference number: 1 (lower is better)
Translates to: TWMPETSIDHTPTNM*VASGSFLPWSSYKV
Trigger: AACTTTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTGGCATCCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR GCA 90 bp CTTTATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTaGTGTTACAATTTAGACTCCCTGGGACCAGGTATCTTGTACTGG +
Preference number: 1 (lower is better)
Translates to: LYISIKTHTHKVHRG*CYNLDSLGPGILYW
Trigger: CCAGTACAAGATACCTGGTCCCAGGGAGTCTAAATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CAA 90 bp GCCTGGCAGACCTGCCCAGTGGGCCAGCTAGAACAATGCAGTCCTTaGTTATGGCAGGATGATTTACAACACATGCAGGCTACCAGCACT +
Preference number: 2 (lower is better)
Translates to: AWQTCPVGQLEQCSP*LWQDDLQHMQATST
Trigger: AGTGCTGGTAGCCTGCATGTGTTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCCCACTGGGCAGGTCTGCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR GCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTGTGGTGGCAGAAAATTaGATCGGCATTTCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: RPFRQNSIILAISDRDAGVVAEN*IGISSL
Trigger: CAAGCTGGAAATGCCGATGCAATTTTCTGCCACCAC...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
3UTR-3UTR GCA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAATTaGATCGGCATTTCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: SIILAISDRDAGCGGVFGVVAEN*IGISSL
Trigger: CAAGCTGGAAATGCCGATGCAATTTTCTGCCACCAC...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
3UTR-3UTR GCA 90 bp CAGAAACTTCCATCGACCATACACCTACAAACATGTGGGTTGCAAGTGGTTCGTGGCCAGCTAGAACAATaGAGTCCTTTGTTATGGCAG +
Preference number: 2 (lower is better)
Translates to: QKLPSTIHLQTCGLQVVRGQLEQ*SPLLWQ
Trigger: CTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCC...ACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR CCA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGTTGTGGAGGAGTATTTaGAGTGGTGGCAGAAAATTG +
Preference number: 2 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLLWRSI*SGGRKL
Trigger: CAATTTTCTGCCACCACTCCAAATACTCCTCCACAA...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
3UTR CAA 90 bp GGATGCCAGAAACTTCCATCGACCATACACCTACAAACATGTGGGTaGCAAGTGGTTCGTTTTTGCCCTGGAGTTCTTACAAAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: GCQKLPSTIHLQTCG*QVVRFCPGVLTKFH
Trigger: GTGAAACTTTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTGGCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CAA 90 bp ATCGACCATACACCTACAAACATGTGGGTTGCAAGTGGTTCGTTTTaGCCCTGGAGTTCTTACAAAGTTTCACTAGGTGGGTCTAGGTTT +
Preference number: 2 (lower is better)
Translates to: IDHTPTNMWVASGSF*PWSSYKVSLGGSRF
Trigger: AAACCTAGACCCACCTAGTGAAACTTTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CAA 90 bp GCTTTATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTaGCTGTTACAATTTAGACTCCCTGGGACCAGGTATCTTGTACTG +
Preference number: 2 (lower is better)
Translates to: ALYFNQNSYPQSPQG*LLQFRLPGTRYLVL
Trigger: CAGTACAAGATACCTGGTCCCAGGGAGTCTAAATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR TCA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACATCGGCATTTCCAGCTTaGGTAGGTCTTATCTTCTTA +
Preference number: 2 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTSAFPA*VGLIFL
Trigger: TAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGA...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
3UTR-3UTR TCA 90 bp GTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATTCGGCATTTCCAGCTTaGGTAGGTCTTATCTTCTTA +
Preference number: 2 (lower is better)
Translates to: VGGIRKITNRGLRINGNDSAFPA*VGLIFL
Trigger: TAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGA...ATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATTCCACCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR GCA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTATGATTTACAACACATaGAGGCTACCAGCACTGCCC +
Preference number: 2 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTIMIYNT*RLPALP
Trigger: GGGCAGTGCTGGTAGCCTGCATGTGTTGTAAATCAT...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR CCA 90 bp CAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATCACTAATTGGATTGTGGAGGAGTATTTaGAGTGGTGGCAGAAAATTG +
Preference number: 2 (lower is better)
Translates to: QEDHKQRVKDKWKRSLIGLWRSI*SGGRKL
Trigger: CAATTTTCTGCCACCACTCCAAATACTCCTCCACAA...TCCAATTAGTGATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR CCA 90 bp AGAGTTGTAATCTACCAACACTTGCCAACAGGCTTTTATTTAGAACTAATGAACGAGGAGTATTTGGAGTaGTGGCAGAAAATTGCATCG +
Preference number: 2 (lower is better)
Translates to: RVVIYQHLPTGFYLELMNEEYLE*WQKIAS
Trigger: CGATGCAATTTTCTGCCACCACTCCAAATACTCCTC...GTTCATTAGTTCTAAATAAAAGCCTGTTGGCAAGTGTTGGTAGATTACAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR GCA 72 bp ACCTTCCCACTACAGTTCCAAGTAGCCTGGCAGACCTaGCCAGTGGGCCAGCTAGAACAATGCAGTCCTTTG +
Preference number: 3 (lower is better)
Translates to: TFPLQFQVAWQT*PVGQLEQCSPL
Trigger: CAAAGGACTGCATTGTTCTAGCTGGCCCACTGGGCAGGTCTGCCAGGCTACTTGGAACTGTAGTGGGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CCA 72 bp CAATCAACCACCTTCCCACTACAGTTCCAAGTAGCCTaGCAGACCTGCCCAGTGGGCCAGCTAGAACAATGC +
Preference number: 3 (lower is better)
Translates to: QSTTFPLQFQVA*QTCPVGQLEQC
Trigger: GCATTGTTCTAGCTGGCCCACTGGGCAGGTCTGCCAGGCTACTTGGAACTGTAGTGGGAAGGTGGTTGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR GCA 72 bp GCCTGGCAGACCTGCCCAGTGGGCCAGCTAGAACAATaGAGTCCTTTGTTATGGCAGGATGATTTACAACAC +
Preference number: 3 (lower is better)
Translates to: AWQTCPVGQLEQ*SPLLWQDDLQH
Trigger: GTGTTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCCCACTGGGCAGGTCTGCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR TCA 72 bp CCAGCTAGAACAATGCAGTCCTTTGTTATGGCAGGATaGTTTACAACACATGCAGGCTACCAGCACTGCCCC +
Preference number: 3 (lower is better)
Translates to: PARTMQSFVMAG*FTTHAGYQHCP
Trigger: GGGGCAGTGCTGGTAGCCTGCATGTGTTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR CAA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGATCGGCATTTCCAGCTaGAGTAGGTCTTATCTTCTT +
Preference number: 3 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEEIGISS*SRSYLL
Trigger: AAGAAGATAAGACCTACTCAAGCTGGAAATGCCGAT...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
3UTR CCA 72 bp CCAGAAACTTCCATCGACCATACACCTACAAACATGTaGGTTGCAAGTGGTTCGTTTTTGCCCTGGAGTTCT +
Preference number: 3 (lower is better)
Translates to: PETSIDHTPTNM*VASGSFLPWSS
Trigger: AGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR GCA 72 bp TCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTaGTGTTACAATTTAGACTCCCTGGGACCAGGTATC +
Preference number: 3 (lower is better)
Translates to: SIKTHTHKVHRG*CYNLDSLGPGI
Trigger: GATACCTGGTCCCAGGGAGTCTAAATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR CAA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACATCGGCATTTCCAGCTaGAGTAGGTCTTATCTTCTT +
Preference number: 3 (lower is better)
Translates to: VSRPFRQNSIILAISDRDIGISS*SRSYLL
Trigger: AAGAAGATAAGACCTACTCAAGCTGGAAATGCCGAT...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
3UTR GCA 72 bp AACTTCCATCGACCATACACCTACAAACATGTGGGTTaGAAGTGGTTCGTTTTTGCCCTGGAGTTCTTACAA +
Preference number: 3 (lower is better)
Translates to: NFHRPYTYKHVG*KWFVFALEFLQ
Trigger: TTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CCA 72 bp CATCGACCATACACCTACAAACATGTGGGTTGCAAGTaGTTCGTTTTTGCCCTGGAGTTCTTACAAAGTTTC +
Preference number: 3 (lower is better)
Translates to: HRPYTYKHVGCK*FVFALEFLQSF
Trigger: GAAACTTTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR TCA 72 bp TTTAAGAATCACAGCAATCCAAGCAAAGTACCTCACTaGGTAGGTATCAAGACCCTTCAGGCAGAATTCCAT +
Preference number: 3 (lower is better)
Translates to: FKNHSNPSKVPH*VGIKTLQAEFH
Trigger: ATGGAATTCTGCCTGAAGGGTCTTGATACCTACTCAGTGAGGTACTTTGCTTGGATTGCTGTGATTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR CAA 90 bp TTATTTAGAACTAATGAACTTGTAGGTGGAATCAGGAAGATCACAAACAGAGGGAGTGGTGGCAGAAAATaGCATCGGCATTTCCAGCTT +
Preference number: 3 (lower is better)
Translates to: LFRTNELVGGIRKITNRGSGGRK*HRHFQL
Trigger: AAGCTGGAAATGCCGATGCAATTTTCTGCCACCACT...CCCTCTGTTTGTGATCTTCCTGATTCCACCTACAAGTTCATTAGTTCTAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CCA 72 bp AATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATaGAAACGATCACTAATTGGACTCGCCAAAAGACAG +
Preference number: 3 (lower is better)
Translates to: NQEDHKQRVKDK*KRSLIGLAKRQ
Trigger: CTGTCTTTTGGCGAGTCCAATTAGTGATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR-3UTR CAA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTGAACAATGCAGTCCTTaGTTATGGCAGGATGATTTA +
Preference number: 3 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTIEQCSP*LWQDDL
Trigger: TAAATCATCCTGCCATAACAAAGGACTGCATTGTTC...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR GCA 72 bp TCTTACAAAGTTTCACTAGGTGGGTCTAGGTTTTTCTaGTATGGTCAGATGGAAAACTTAAACTTACAGAAA +
Preference number: 3 (lower is better)
Translates to: SYKVSLGGSRFF*YGQMENLNLQK
Trigger: TTTCTGTAAGTTTAAGTTTTCCATCTGACCATAGCAGAAAAACCTAGACCCACCTAGTGAAACTTTGTAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGATCCGCAGCCCCAGTaGAGGCTCTCGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVDPQPQ*RLSAQA
Trigger: CGCCTGCGCCGAGAGCCTGCACTGGGGCTGCGGATC...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp TCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGATCCGCAGCCCCAGTaGAGGCTCTCGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SGRIPSFSQLVTGTLVVEDPQPQ*RLSAQA
Trigger: CGCCTGCGCCGAGAGCCTGCACTGGGGCTGCGGATC...CTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCATCGAACACCGGCTGCTaGCCCTCCATCTCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LAISDRDAGCGGVFGVVASNTGC*PSISAA
Trigger: AGCGGCCGAGATGGAGGGGCAGCAGCCGGTGTTCGA...TGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTCGAACACCGGCTGCTaGCCCTCCATCTCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEESNTGC*PSISAA
Trigger: AGCGGCCGAGATGGAGGGGCAGCAGCCGGTGTTCGA...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp TCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGGCCGCCGCTGGGACATaGTTAGCTGTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SQLVTGTLVVEEYLEWWQAAAGT*LAVRWT
Trigger: TGTCCACCTCACAGCTAATCATGTCCCAGCGGCGGC...CTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGGCTCCACCACCAATTaGGTCGGGCTCGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: LAISDRDAGCGGVFGVVAGSTTN*VGLELS
Trigger: CGAGAGTTCGAGCCCGACGCAATTGGTGGTGGAGCC...TGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGTGCTCGAACACCGGCTaGTGCCCCTCCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLCSNTG*CPSISA
Trigger: GGCCGAGATGGAGGGGCAGCAGCCGGTGTTCGAGCA...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGCCTCCAGGAGACGGGTaGATCCGCAGCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWPPGDG*IRSPSA
Trigger: TGCACTGGGGCTGCGGATCCACCCGTCTCCTGGAGG...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGTGAGGTGGACAGCGTaGCTCACGGTTGTGACCACC +
Preference number: 4 (lower is better)
Translates to: LAISDRDAGCGGVFGVVAVRWTA*LTVVTT
Trigger: GGTGGTCACAACCGTGAGCCACGCTGTCCACCTCAC...TGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGCTGCCTTGGGCTGCTTaGCTCCACCACCAATTGCGT +
Preference number: 4 (lower is better)
Translates to: SQLVTGTLVVEEYLEWWQLPWAA*LHHQLR
Trigger: ACGCAATTGGTGGTGGAGCCAAGCAGCCCAAGGCAG...CTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGGCCGCTGCCGCCGCTaGGACATGATTAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SGRIPSFSQLVTGTLVVEGRCRR*DMISCE
Trigger: CTCACAGCTAATCATGTCCCAGCGGCGGCAGCGGCC...CTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGGGAGTCAAGGCAAAGTaGGGAGCAACAGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SQLVTGTLVVEEYLEWWQGVKAK*GATGAS
Trigger: GCTTGCCCCTGTTGCTCCCCACTTTGCCTTGACTCC...CTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTGCCGCCGCTGGGACATaGTTAGCTGTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGAAAGT*LAVRWT
Trigger: TGTCCACCTCACAGCTAATCATGTCCCAGCGGCGGC...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGTCCAACTGCTCCTGTaGGATCCAGGGTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LAISDRDAGCGGVFGVVAVQLLL*DPGFCP
Trigger: TGGACAGAACCCTGGATCTCACAGGAGCAGTTGGAC...TGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp TCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGGGGTGTTTCAACGTTTaGGCTGTGGCCAGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SQLVTGTLVVEEYLEWWQGCFNV*AVASPS
Trigger: GCTTGGACTGGCCACAGCTCAAACGTTGAAACACCC...CTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GGAGTATTTGGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGCTCCATCTCGGCCGCTaGCGCCGCTGGGACATGATT +
Preference number: 4 (lower is better)
Translates to: GVFGVVAENCIGISSLSRLHLGR*RRWDMI
Trigger: AATCATGTCCCAGCGGCGGCAGCGGCCGAGATGGAG...CCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTCCAAATACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp TCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGTAGCCTGGCAGACCTaGCCAGTGGGCCAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: SGRIPSFSQLVTGTLVVEVAWQT*PVGQLE
Trigger: TTCTAGCTGGCCCACTGGGCAGGTCTGCCAGGCTAC...CTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp CTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAACCGCTTCCGGAAATTaGGCTCCGGGAGACTTTGAC +
Preference number: 4 (lower is better)
Translates to: LAISDRDAGCGGVFGVVATASGN*APGDFD
Trigger: GTCAAAGTCTCCCGGAGCCCAATTTCCGGAAGCGGT...TGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTCGCCCGAGGCGCTCATaGTTGGGGATTCGCAGACTT +
Preference number: 4 (lower is better)
Translates to: DPSGRIPSFSQLVTGTLVRPRRS*LGIRRL
Trigger: AAGTCTGCGAATCCCCAACCATGAGCGCCTCGGGCG...AACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTGAGGTGGACAGCGTaGCTCACGGTTGTGACCACC +
Preference number: 4 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLVRWTA*LTVVTT
Trigger: GGTGGTCACAACCGTGAGCCACGCTGTCCACCTCAC...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGGTCCACAAAAACCACTaGTGCCCTGCCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEEVHKNH*CPACSS
Trigger: ACTGCTGCAGGCAGGGCATCAGTGGTTTTTGTGGAC...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGACTTTGGCCAGCACCTaGTCCCATCCTTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEETLAST*SHPCWV
Trigger: TACCCAGCAAGGATGGGAGCAGGTGCTGGCCAAAGT...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCTCAGCACAAACACTaGCTTGGGCTGCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVAQHKH*LGLLGS
Trigger: GGAGCCAAGCAGCCCAAGGCAGTGTTTGTGCTGAGC...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCAGGCTACCAGCACTaGCCCAGACACTACCCCTCC +
Preference number: 4 (lower is better)
Translates to: VSRPFRQNSIILAISDRDAGYQH*PRHYPS
Trigger: GGAGGGGTAGTGTCTGGGGCAGTGCTGGTAGCCTGC...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp GATAAATGGAAACGATCACTAATTGGACTCGCCAAAAGACAGACTGTCGCCTTCCCTCCAGGAGACGGGTaGATCCGCAGCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: DKWKRSLIGLAKRQTVAFPPGDG*IRSPSA
Trigger: TGCACTGGGGCTGCGGATCCACCCGTCTCCTGGAGG...GAAGGCGACAGTCTGTCTTTTGGCGAGTCCAATTAGTGATCGTTTCCATTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGACAGTTCCAAGTAGCCTaGCAGACCTGCCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SIILAISDRDAGCGGVFGQFQVA*QTCPVG
Trigger: GCCCACTGGGCAGGTCTGCCAGGCTACTTGGAACTG...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp GACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTAGTGACTGCGGCAGATaGTGTCCCGTAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: DPSGRIPSFSQLVTGTLVSDCGR*CPVGSP
Trigger: TGGAGATCCTACGGGACATCATCTGCCGCAGTCACT...AACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGGTCCACAAAAACCACTaGTGCCCTGCCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWVHKNH*CPACSS
Trigger: ACTGCTGCAGGCAGGGCATCAGTGGTTTTTGTGGAC...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGTCCAACTGCTCCTGTaGGATCCAGGGTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVVQLLL*DPGFCP
Trigger: TGGACAGAACCCTGGATCTCACAGGAGCAGTTGGAC...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAGGGTGTTTCAACGTTTaGGCTGTGGCCAGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKGCFNV*AVASPS
Trigger: GCTTGGACTGGCCACAGCTCAAACGTTGAAACACCC...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp TCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGTCCATGATGTCCAACTaGTCCTGTGAGATCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SQLVTGTLVVEEYLEWWQSMMSN*SCEIQG
Trigger: ACCCTGGATCTCACAGGAGCAGTTGGACATCATGGA...CTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGACCGCTTCCGGAAATTaGGCTCCGGGAGACTTTGAC +
Preference number: 4 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLTASGN*APGDFD
Trigger: GTCAAAGTCTCCCGGAGCCCAATTTCCGGAAGCGGT...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGCGCCCGAGGCGCTCATaGTTGGGGATTCGCAGACTT +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGRPRRS*LGIRRL
Trigger: AAGTCTGCGAATCCCCAACCATGAGCGCCTCGGGCG...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp AGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGATGCTCCCATCCTTGCTaGGTAAAGGACAGTACGCCC +
Preference number: 4 (lower is better)
Translates to: RQNSIILAISDRDAGCGGCSHPC*VKDSTP
Trigger: GGGCGTACTGTCCTTTACCCAGCAAGGATGGGAGCA...TCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGTGGCCTGGGAGCTaGGGAAGTGCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: DPSGRIPSFSQLVTGTLVVWPGS*GSAEMI
Trigger: GATCATTTCAGCACTTCCCCAGCTCCCAGGCCACAC...AACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCTTCAGGAGTCGTGTaGACAGCACGATTACCTGGG +
Preference number: 4 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVASGVV*TARLPG
Trigger: CCCAGGTAATCGTGCTGTCCACACGACTCCTGAAGC...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTCAGAAGCCAAGGTCTaGATGCAGTCGGTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEESEAKV*MQSVSC
Trigger: GCAACTGACCGACTGCATCCAGACCTTGGCTTCTGA...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CCAGTGGGCCAGCTAGAACAATGCAGTCCTTTGTTATGGCAGGATGATTTACAAGGCTCCGGGAGACTTTaGCAGTCTCCACAGTACACG +
Preference number: 4 (lower is better)
Translates to: PVGQLEQCSPLLWQDDLQGSGRL*QSPQYT
Trigger: CGTGTACTGTGGAGACTGTCAAAGTCTCCCGGAGCC...TTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCCCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGTTCACACAGAGAACTaGGGCCTGACACTAGGCATC +
Preference number: 4 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVVHTEN*GLTLGI
Trigger: GATGCCTAGTGTCAGGCCTCAGTTCTCTGTGTGAAC...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGACCAGATCCGCAGCGATaGCCTGACTTAAGGAACCTA +
Preference number: 4 (lower is better)
Translates to: RQNSIILAISDRDAGCGGPDPQR*PDLRNL
Trigger: TAGGTTCCTTAAGTCAGGTCATCGCTGCGGATCTGG...TCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGGGTGTCACTGGATTGTaGAAGACAGCCTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWGVTGL*KTAWCN
Trigger: GTTGCACCAGGCTGTCTTTCACAATCCAGTGACACC...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGACCTGCTCCCATCCTTaGTGGGTAAAGGACAGTACG +
Preference number: 4 (lower is better)
Translates to: PSFSQLVTGTLVVEEYLETCSHP*WVKDST
Trigger: CGTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGT...CTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAAACACTGCCTTGGGCTaGTTGGCTCCACCACCAATT +
Preference number: 4 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKNTALG*LAPPPI
Trigger: AATTGGTGGTGGAGCCAAGCAGCCCAAGGCAGTGTT...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CCAGTGGGCCAGCTAGAACAATGCAGTCCTTTGTTATGGCAGGATGATTTACAAGCTCAGCACAAACACTaGCTTGGGCTGCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PVGQLEQCSPLLWQDDLQAQHKH*LGLLGS
Trigger: GGAGCCAAGCAGCCCAAGGCAGTGTTTGTGCTGAGC...TTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCCCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGGCGCTATTAAGGAGGTaGACATCCTGGGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWALLRR*TSWGSS
Trigger: ACTGCTACCCCAGGATGTGCACCTCCTTAATAGCGC...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTACTAGGCATCTGATCTaGAGCAGCAGCTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGTRHLI*SSSSGV
Trigger: AACCCCAGAGCTGCTGCTGCAGATCAGATGCCTAGT...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAAAACCACTGATGCCCTaGCTGCAGCAGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKKPLMP*LQQSSS
Trigger: GGAAGAAGACTGCTGCAGGCAGGGCATCAGTGGTTT...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGATGCTCCCATCCTTGCTaGGTAAAGGACAGTACGCCC +
Preference number: 4 (lower is better)
Translates to: SIILAISDRDAGCGGVFGCSHPC*VKDSTP
Trigger: GGGCGTACTGTCCTTTACCCAGCAAGGATGGGAGCA...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGGCACAAACACTGCCTTaGGCTGCTTGGCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGAQTLP*AAWLHH
Trigger: GTGGTGGAGCCAAGCAGCCCAAGGCAGTGTTTGTGC...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGCTTCCCATAGGGCTTTaGCTGTGGTGTCACTGGATT +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEELPIGL*LWCHWI
Trigger: AATCCAGTGACACCACAGCCAAAGCCCTATGGGAAG...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGTCAACGTTTGAGCTGTaGCCAGTCCAAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SGRIPSFSQLVTGTLVVESTFEL*PVQAGG
Trigger: TCCTCCAGCTTGGACTGGCCACAGCTCAAACGTTGA...CTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTGGCTGTAGTCCTCGTTaGTTCTCTGGGTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGGCSPR*FSGLQA
Trigger: AGCCTGTAACCCAGAGAACCAACGAGGACTACAGCC...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAGGCTGTAGTCCTCGTTaGTTCTCTGGGTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKGCSPR*FSGLQA
Trigger: AGCCTGTAACCCAGAGAACCAACGAGGACTACAGCC...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGGACAGCACGATTACCTaGGTTCCTGGCTTCAACGAT +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEEDSTIT*VPGFND
Trigger: ATCGTTGAAGCCAGGAACCCAGGTAATCGTGCTGTC...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCACTCAGGAATGTTAAGTaGCTTCAGGAGTCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LAISDRDAGCGGVFGVVALRNVK*LQESCG
Trigger: TCCACACGACTCCTGAAGCCACTTAACATTCCTGAG...TGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGTCAGAAGCCAAGGTCTaGATGCAGTCGGTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVSEAKV*MQSVSC
Trigger: GCAACTGACCGACTGCATCCAGACCTTGGCTTCTGA...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGCAGGGACGCTGGTTGTaGAGGAGTATTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLQGRWL*RSIWSG
Trigger: ACCACTCCAAATACTCCTCCACAACCAGCGTCCCTG...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp GCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGTCTTATCTTCTTAGCGGAGGCTCCGGGAGACTTTaGCAGTCTCCACAGTACACG +
Preference number: 4 (lower is better)
Translates to: AENCIGISSLSRSYLLSGGSGRL*QSPQYT
Trigger: CGTGTACTGTGGAGACTGTCAAAGTCTCCCGGAGCC...TCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CCAGTGGGCCAGCTAGAACAATGCAGTCCTTTGTTATGGCAGGATGATTTACAAAGTGACTGCGGCAGATaGTGTCCCGTAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PVGQLEQCSPLLWQDDLQSDCGR*CPVGSP
Trigger: TGGAGATCCTACGGGACATCATCTGCCGCAGTCACT...TTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCCCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACCGTGGCTCACGGTTGTaGCCACCACACAATACTGGA +
Preference number: 4 (lower is better)
Translates to: VSRPFRQNSIILAISDRDRGSRL*PPHNTG
Trigger: TCCAGTATTGTGTGGTGGTCACAACCGTGAGCCACG...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp ATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAATGTTCACACAGAGAACTaGGGCCTGACACTAGGCATC +
Preference number: 4 (lower is better)
Translates to: ISDRDAGCGGVFGVVAENVHTEN*GLTLGI
Trigger: GATGCCTAGTGTCAGGCCTCAGTTCTCTGTGTGAAC...ATTTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGACCAGATCCGCAGCGATaGCCTGACTTAAGGAACCTA +
Preference number: 4 (lower is better)
Translates to: SIILAISDRDAGCGGVFGPDPQR*PDLRNL
Trigger: TAGGTTCCTTAAGTCAGGTCATCGCTGCGGATCTGG...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAATCATGGGCAGCAGCTaGTTTAACACAACGGACATT +
Preference number: 4 (lower is better)
Translates to: LAISDRDAGCGGVFGVVAIMGSS*FNTTDI
Trigger: AATGTCCGTTGTGTTAAATCAGCTGCTGCCCATGAT...TGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTCTGGCCTCTCGGGATaGAATATTTCCTCCACAACT +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEESGLSG*NISSTT
Trigger: AGTTGTGGAGGAAATATTTCATCCCGAGAGGCCAGA...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp CTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCACTTGGGAAACTACGGTaGAGGAACTTCTTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LAISDRDAGCGGVFGVVALGKLR*RNFFQN
Trigger: GTTCTGAAAGAAGTTCCTGCACCGTAGTTTCCCAAG...TGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAAACACTGCCTTGGGCTaGTTGGCTCCACCACCAATT +
Preference number: 4 (lower is better)
Translates to: SIILAISDRDAGCGGVFGNTALG*LAPPPI
Trigger: AATTGGTGGTGGAGCCAAGCAGCCCAAGGCAGTGTT...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAACTAGGCATCTGATCTaGAGCAGCAGCTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SIILAISDRDAGCGGVFGTRHLI*SSSSGV
Trigger: AACCCCAGAGCTGCTGCTGCAGATCAGATGCCTAGT...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGCTCCTCAGTATGGAGTaGAGTGAGCGCTATCATGTT +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEELLSME*SERYHV
Trigger: AACATGATAGCGCTCACTGCACTCCATACTGAGGAG...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCACCGAACTTCCATCACTaGCTCTTTGTGCTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: LAISDRDAGCGGVFGVVAPNFHH*LFVLSV
Trigger: AACACTAAGCACAAAGAGGCAGTGATGGAAGTTCGG...TGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGGGGATTCGCAGACTTaGGAAACTACGGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SIILAISDRDAGCGGVFGGDSQT*ETTVQE
Trigger: TTCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCC...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGTCTTATCTTCTTAGCGGACGAGGCGCTCATGGTTaGGGATTCGCAGACTTGGGA +
Preference number: 4 (lower is better)
Translates to: AENCIGISSLSRSYLLSGRGAHG*GFADLG
Trigger: TCCCAAGTCTGCGAATCCCCAACCATGAGCGCCTCG...TCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACAGGAGGTGCACATCCTaGGGTAGCAGTGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: VSRPFRQNSIILAISDRDRRCTS*GSSGKR
Trigger: CCTTTTCCCACTGCTACCCCAGGATGTGCACCTCCT...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CAGAAACTTCCATCGACCATACACCTACAAACATGTGGGTTGCAAGTGGTTCGTGTGTGGCCTGGGAGCTaGGGAAGTGCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: QKLPSTIHLQTCGLQVVRVWPGS*GSAEMI
Trigger: GATCATTTCAGCACTTCCCCAGCTCCCAGGCCACAC...ACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAATGGCTGTGGTGTCACTaGATTGTGAAAGACAGCCTG +
Preference number: 4 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKWLWCH*IVKDSL
Trigger: CAGGCTGTCTTTCACAATCCAGTGACACCACAGCCA...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGCCACTTGGCAGTCTGTaGGTGTTTCAACGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: PSFSQLVTGTLVVEEYLEPLGSL*VFQRLS
Trigger: GCTCAAACGTTGAAACACCCACAGACTGCCAAGTGG...CTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGATTACCTGGGTTCCTaGCTTCAACGATGCCACAAG +
Preference number: 4 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVDYLGS*LQRCHK
Trigger: CTTGTGGCATCGTTGAAGCCAGGAACCCAGGTAATC...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
3UTR CAA 72 bp ACCTGCCCAGTGGGCCAGCTAGAACAATGCAGTCCTTaGTTATGGCAGGATGATTTACAACACATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TCPVGQLEQCSP*LWQDDLQHMQA
Trigger: AGCCTGCATGTGTTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCCCACTGGGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTACTAAGTTGTCTCCATaGTGTCCAACTGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGTKLSP*CPTAPV
Trigger: CACAGGAGCAGTTGGACATCATGGAGACAACTTAGT...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAATCCCCATACTCATCTTaGTTGGCAGGTTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKSPYSS*LAGFLC
Trigger: GCAGAGAAAACCTGCCAATCAAGATGAGTATGGGGA...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGACTCCCCAATGCTCTaGAGAAGGAGCCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: RQNSIILAISDRDAGCGGDSPML*RRSLSK
Trigger: TTTTGAAAGGCTCCTTCTTCAGAGCATTGGGGAGTC...TCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTCCTCACAGAAGACCTaGGCCAATGCTTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGSSQKT*ANAFLT
Trigger: AGTCAAGAAAGCATTGGCTCAGGTCTTCTGTGAGGA...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGCTTGGGAAACTACGGTaGAGGAACTTCTTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEELGKLR*RNFFQN
Trigger: GTTCTGAAAGAAGTTCCTGCACCGTAGTTTCCCAAG...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp TTTAGAACTAATGAACTTGTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTATGCTCGAACACCGGCTaGTGCCCCTCCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FRTNELVGGIRKITNRGLCSNTG*CPSISA
Trigger: GGCCGAGATGGAGGGGCAGCAGCCGGTGTTCGAGCA...TAACCCTCTGTTTGTGATCTTCCTGATTCCACCTACAAGTTCATTAGTTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGCTTCTTCCTGTTCTTTaGAGGGGCATAATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWLLPVL*RGIIGQ
Trigger: CTGGCCAATTATGCCCCTGCAAAGAACAGGAAGAAG...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTCTTCTTCCTGTTCTTTaGAGGGGCATAATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGLLPVL*RGIIGQ
Trigger: CTGGCCAATTATGCCCCTGCAAAGAACAGGAAGAAG...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGAAACCACTGATGCCCTaGCTGCAGCAGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGKPLMP*LQQSSS
Trigger: GGAAGAAGACTGCTGCAGGCAGGGCATCAGTGGTTT...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGAAGCCAAGGTCTGGATaGAGTCGGTCAGTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWKPRSG*SRSVAN
Trigger: ATTTGCAACTGACCGACTGCATCCAGACCTTGGCTT...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGTATCTTCTTAGCGGATaGTCAGAAGCCAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVYLLSG*SEAKVW
Trigger: CCAGACCTTGGCTTCTGAGCATCCGCTAAGAAGATA...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGGGCCAGCTAGAACAATaGAGTCCTTTGTTATGGCAG +
Preference number: 4 (lower is better)
Translates to: PSFSQLVTGTLVVEEYLEGQLEQ*SPLLWQ
Trigger: CTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCC...CTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp TCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGCAAGTGGTTCGTTTTTaGCCTGGAGTTCTTACAAAG +
Preference number: 4 (lower is better)
Translates to: SQLVTGTLVVEEYLEWWQQVVRF*PGVLTK
Trigger: CTTTGTAAGAACTCCAGGGCAAAAACGAACCACTTG...CTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGGGGGATTCGCAGACTTaGGAAACTACGGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGGDSQT*ETTVQE
Trigger: TTCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCC...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACACAGCCCGTTTCACTTTaGCCAGCACCTGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTQPVSL*PAPAPI
Trigger: GATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGCTG...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGCACAAACACTGCCTTaGGCTGCTTGGCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTAQTLP*AAWLHH
Trigger: GTGGTGGAGCCAAGCAGCCCAAGGCAGTGTTTGTGC...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGTTTTCCTCCTCAGTATaGAGTGCAGTGAGCGCTATC +
Preference number: 4 (lower is better)
Translates to: SGRIPSFSQLVTGTLVVEFSSSV*SAVSAI
Trigger: GATAGCGCTCACTGCACTCCATACTGAGGAGGAAAA...CTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTTTTCCTCCTCAGTATaGAGTGCAGTGAGCGCTATC +
Preference number: 4 (lower is better)
Translates to: PSFSQLVTGTLVVEEYLEFSSSV*SAVSAI
Trigger: GATAGCGCTCACTGCACTCCATACTGAGGAGGAAAA...CTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp ATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAATTGGCTGTGGTGTCACTaGATTGTGAAAGACAGCCTG +
Preference number: 4 (lower is better)
Translates to: ISDRDAGCGGVFGVVAENWLWCH*IVKDSL
Trigger: CAGGCTGTCTTTCACAATCCAGTGACACCACAGCCA...ATTTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAAAGTTGTCCCACTTaGCAGTCTGTGGGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SGRIPSFSQLVTGTLVVEESCPT*QSVGVS
Trigger: TGAAACACCCACAGACTGCCAAGTGGGACAACTTTC...CTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTCTCAGGAATGTTAAGTaGCTTCAGGAGTCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGLRNVK*LQESCG
Trigger: TCCACACGACTCCTGAAGCCACTTAACATTCCTGAG...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp GCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGTCTTATCTTCTTAGCGGATCCGCAGCGATGACCTaGCTTAAGGAACCTACAGCA +
Preference number: 4 (lower is better)
Translates to: AENCIGISSLSRSYLLSGSAAMT*LKEPTA
Trigger: TGCTGTAGGTTCCTTAAGTCAGGTCATCGCTGCGGA...TCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp ACCTACAAACATGTGGGTTGCAAGTGGTTCGTTTTTGCCCTGGAGTTCTTACAATCCGCAGCGATGACCTaGCTTAAGGAACCTACAGCA +
Preference number: 4 (lower is better)
Translates to: TYKHVGCKWFVFALEFLQSAAMT*LKEPTA
Trigger: TGCTGTAGGTTCCTTAAGTCAGGTCATCGCTGCGGA...TTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp CCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGATCATGGGCAGCAGCTaGTTTAACACAACGGACATT +
Preference number: 4 (lower is better)
Translates to: PSFSQLVTGTLVVEEYLEIMGSS*FNTTDI
Trigger: AATGTCCGTTGTGTTAAATCAGCTGCTGCCCATGAT...CTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp GACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTCTCACCTGGTGGGTATaGTTTCCAGGAACATATACA +
Preference number: 4 (lower is better)
Translates to: DPSGRIPSFSQLVTGTLVLTWWV*FPGTYT
Trigger: TGTATATGTTCCTGGAAATCATACCCACCAGGTGAG...AACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388940.8
CDS-3UTR TCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGTCACTTCAGAGACTGTaGCCCCACCTACCACAAAGA +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGSLQRL*PHLPQR
Trigger: TCTTTGTGGTAGGTGGGGTCACAGTCTCTGAAGTGA...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CAGAAACTTCCATCGACCATACACCTACAAACATGTGGGTTGCAAGTGGTTCGTTCACTTCAGAGACTGTaGCCCCACCTACCACAAAGA +
Preference number: 4 (lower is better)
Translates to: QKLPSTIHLQTCGLQVVRSLQRL*PHLPQR
Trigger: TCTTTGTGGTAGGTGGGGTCACAGTCTCTGAAGTGA...ACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTAGCAAAGTACCTCACTaGGTAGGTATCAAGACCCTT +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGSKVPH*VGIKTL
Trigger: AAGGGTCTTGATACCTACTCAGTGAGGTACTTTGCT...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAAGCAAAGTACCTCACTaGGTAGGTATCAAGACCCTT +
Preference number: 4 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKSKVPH*VGIKTL
Trigger: AAGGGTCTTGATACCTACTCAGTGAGGTACTTTGCT...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGATGCCTGGTGGGTATaGTTTCCAGGAACATATACA +
Preference number: 4 (lower is better)
Translates to: RQNSIILAISDRDAGCGGDAWWV*FPGTYT
Trigger: TGTATATGTTCCTGGAAATCATACCCACCAGGCATC...TCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp TTTAGAACTAATGAACTTGTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTACTCCATCTCGGCCGCTaGCGCCGCTGGGACATGATT +
Preference number: 4 (lower is better)
Translates to: FRTNELVGGIRKITNRGLLHLGR*RRWDMI
Trigger: AATCATGTCCCAGCGGCGGCAGCGGCCGAGATGGAG...TAACCCTCTGTTTGTGATCTTCCTGATTCCACCTACAAGTTCATTAGTTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp GGAGTATTTGGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGCCGTGTAGTTCATGTTaGCCATCCATTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: GVFGVVAENCIGISSLSRPCSSC*PSIHTA
Trigger: AGCTGTGTGAATGGATGGGCAACATGAACTACACGG...CCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTCCAAATACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGCCGAACTTCCATCACTaGCTCTTTGTGCTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: PSFSQLVTGTLVVEEYLEPNFHH*LFVLSV
Trigger: AACACTAAGCACAAAGAGGCAGTGATGGAAGTTCGG...CTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTCCTGGCTTCAACGATaGCACAAGATCTTTGACCAT +
Preference number: 4 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWSWLQR*HKIFDH
Trigger: ATGGTCAAAGATCTTGTGGCATCGTTGAAGCCAGGA...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp ATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAATAAGCCAAGGTCTGGATaGAGTCGGTCAGTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: ISDRDAGCGGVFGVVAENKPRSG*SRSVAN
Trigger: ATTTGCAACTGACCGACTGCATCCAGACCTTGGCTT...ATTTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GGAGTATTTGGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGGTGGTGGCAGAAAATTaGATCGGCATTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GVFGVVAENCIGISSLSRVVAEN*IGISSL
Trigger: CAAGCTGGAAATGCCGATGCAATTTTCTGCCACCAC...CCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTCCAAATACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATCTGCCTTGGGCTGCTTaGCTCCACCACCAATTGCGT +
Preference number: 4 (lower is better)
Translates to: VGGIRKITNRGLRINGNDLPWAA*LHHQLR
Trigger: ACGCAATTGGTGGTGGAGCCAAGCAGCCCAAGGCAG...ATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATTCCACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp TTCAGTTTTATCTCTTTATTACCAACATGGATGCCAGAAACTTCCATCGACCATGGCCGCTGCCGCCGCTaGGACATGATTAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: FSFISLLPTWMPETSIDHGRCRR*DMISCE
Trigger: CTCACAGCTAATCATGTCCCAGCGGCGGCAGCGGCC...ATGGTCGATGGAAGTTTCTGGCATCCATGTTGGTAATAAAGAGATAAAACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACATCACATCATTTGTGTaGCCTGGGAGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VSRPFRQNSIILAISDRDITSFV*PGSWGS
Trigger: ACTTCCCCAGCTCCCAGGCCACACAAATGATGTGAT...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAATAGGGCTTTGGCTGTaGTGTCACTGGATTGTGAAA +
Preference number: 4 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKIGLWL*CHWIVK
Trigger: TTTCACAATCCAGTGACACCACAGCCAAAGCCCTAT...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAATCCTCGTTGGTTCTCTaGGTTACAGGCTTAATCATG +
Preference number: 4 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKSSLVL*VTGLIM
Trigger: CATGATTAAGCCTGTAACCCAGAGAACCAACGAGGA...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGAGGAGTATTTGGAGTaGTGGCAGAAAATTGCATCG +
Preference number: 4 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLEEYLE*WQKIAS
Trigger: CGATGCAATTTTCTGCCACCACTCCAAATACTCCTC...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACTCCCCATACTCATCTTaGTTGGCAGGTTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSRPFRQNSIILAISDRDSPYSS*LAGFLC
Trigger: GCAGAGAAAACCTGCCAATCAAGATGAGTATGGGGA...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGTGGAGGAGGCCACAATaGTTCATTAGAGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGWRRPQ*FIRALR
Trigger: CCTCAAAGCTCTAATGAATCATTGTGGCCTCCTCCA...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CAGAAACTTCCATCGACCATACACCTACAAACATGTGGGTTGCAAGTGGTTCGTGACTCCCCAATGCTCTaGAGAAGGAGCCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: QKLPSTIHLQTCGLQVVRDSPML*RRSLSK
Trigger: TTTTGAAAGGCTCCTTCTTCAGAGCATTGGGGAGTC...ACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGTCCTCACAGAAGACCTaGGCCAATGCTTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGSSQKT*ANAFLT
Trigger: AGTCAAGAAAGCATTGGCTCAGGTCTTCTGTGAGGA...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp TCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGTTTTTGCAGCAAAGGTaGCAATCCAGATTCCTCACA +
Preference number: 4 (lower is better)
Translates to: SGRIPSFSQLVTGTLVVEFLQQR*QSRFLT
Trigger: TGTGAGGAATCTGGATTGTCACCTTTGCTGCAAAAA...CTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTAGCAATATCCCGAAGTaGAGTAAAGAGTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGSNIPK*SKEFIH
Trigger: GTGGATGAACTCTTTACTTCACTTCGGGATATTGCT...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp CCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTCGGCATTTCCAGCTTaGGTAGGTCTTATCTTCTTA +
Preference number: 4 (lower is better)
Translates to: PSFSQLVTGTLVVEEYLESAFPA*VGLIFL
Trigger: TAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGA...CTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGTTTGTTATGGCAGGATaGTTTACAACACATGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVFVMAG*FTTHAG
Trigger: GCCTGCATGTGTTGTAAATCATCCTGCCATAACAAA...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAACCTGCTCCCATCCTTaGTGGGTAAAGGACAGTACG +
Preference number: 4 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTTCSHP*WVKDST
Trigger: CGTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGT...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTGGCTCCACCACCAATTaGGTCGGGCTCGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTIGSTTN*VGLELS
Trigger: CGAGAGTTCGAGCCCGACGCAATTGGTGGTGGAGCC...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp ATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAATTCCTGGCTTCAACGATaGCACAAGATCTTTGACCAT +
Preference number: 4 (lower is better)
Translates to: ISDRDAGCGGVFGVVAENSWLQR*HKIFDH
Trigger: ATGGTCAAAGATCTTGTGGCATCGTTGAAGCCAGGA...ATTTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACTATCTTCTTAGCGGATaGTCAGAAGCCAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSRPFRQNSIILAISDRDYLLSG*SEAKVW
Trigger: CCAGACCTTGGCTTCTGAGCATCCGCTAAGAAGATA...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp CCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTACAAACATGTGGGTTaGAAGTGGTTCGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: PSFSQLVTGTLVVEEYLEYKHVG*KWFVFA
Trigger: GGCAAAAACGAACCACTTGCAACCCACATGTTTGTA...CTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACATCAACGTTTGAGCTGTaGCCAGTCCAAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTSTFEL*PVQAGG
Trigger: TCCTCCAGCTTGGACTGGCCACAGCTCAAACGTTGA...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGTCTTATCTTCTTAGCGGACCACTTGGCAGTCTGTaGGTGTTTCAACGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: AENCIGISSLSRSYLLSGPLGSL*VFQRLS
Trigger: GCTCAAACGTTGAAACACCCACAGACTGCCAAGTGG...TCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGATCCTCGTTGGTTCTCTaGGTTACAGGCTTAATCATG +
Preference number: 4 (lower is better)
Translates to: SIILAISDRDAGCGGVFGSSLVL*VTGLIM
Trigger: CATGATTAAGCCTGTAACCCAGAGAACCAACGAGGA...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GATAAATGGAAACGATCACTAATTGGACTCGCCAAAAGACAGACTGTCGCCTTCGATTACCTGGGTTCCTaGCTTCAACGATGCCACAAG +
Preference number: 4 (lower is better)
Translates to: DKWKRSLIGLAKRQTVAFDYLGS*LQRCHK
Trigger: CTTGTGGCATCGTTGAAGCCAGGAACCCAGGTAATC...GAAGGCGACAGTCTGTCTTTTGGCGAGTCCAATTAGTGATCGTTTCCATTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp GCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGTCTTATCTTCTTAGCGGAGACAGCACGATTACCTaGGTTCCTGGCTTCAACGAT +
Preference number: 4 (lower is better)
Translates to: AENCIGISSLSRSYLLSGDSTIT*VPGFND
Trigger: ATCGTTGAAGCCAGGAACCCAGGTAATCGTGCTGTC...TCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GGAGTATTTGGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGGAGGAGTATTTGGAGTaGTGGCAGAAAATTGCATCG +
Preference number: 4 (lower is better)
Translates to: GVFGVVAENCIGISSLSREEYLE*WQKIAS
Trigger: CGATGCAATTTTCTGCCACCACTCCAAATACTCCTC...CCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTCCAAATACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGTTGTGGAGGAGTATTTaGAGTGGTGGCAGAAAATTG +
Preference number: 4 (lower is better)
Translates to: SGRIPSFSQLVTGTLVVELWRSI*SGGRKL
Trigger: CAATTTTCTGCCACCACTCCAAATACTCCTCCACAA...CTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp AGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGATTGTGGAGGAGTATTTaGAGTGGTGGCAGAAAATTG +
Preference number: 4 (lower is better)
Translates to: RQNSIILAISDRDAGCGGLWRSI*SGGRKL
Trigger: CAATTTTCTGCCACCACTCCAAATACTCCTCCACAA...TCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp GACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGAAACGATCACTAATTaGACTCGCCAAAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: DPSGRIPSFSQLVTGTLVETITN*TRQKTD
Trigger: GTCTGTCTTTTGGCGAGTCCAATTAGTGATCGTTTC...AACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp CAGAAACTTCCATCGACCATACACCTACAAACATGTGGGTTGCAAGTGGTTCGTCCAGGTATCTTGTACTaGAGTCTTTCTTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QKLPSTIHLQTCGLQVVRPGILY*SLSLEG
Trigger: CCCCTCCAAAGAAAGACTCCAGTACAAGATACCTGG...ACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp GGCCAGCTAGAACAATGCAGTCCTTTGTTATGGCAGGATGATTTACAACACATGCATGTGGGTTGCAAGTaGTTCGTTTTTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQLEQCSPLLWQDDLQHMHVGCK*FVFALE
Trigger: CTCCAGGGCAAAAACGAACCACTTGCAACCCACATG...CATGTGTTGTAAATCATCCTGCCATAACAAAGGACTGCATTGTTCTAGCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp TACAATTTAGACTCCCTGGGACCAGGTATCTTGTACTGGAGTCTTTCTTTGGAGTGGAGGAGGCCACAATaGTTCATTAGAGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: YNLDSLGPGILYWSLSLEWRRPQ*FIRALR
Trigger: CCTCAAAGCTCTAATGAATCATTGTGGCCTCCTCCA...CTCCAAAGAAAGACTCCAGTACAAGATACCTGGTCCCAGGGAGTCTAAATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGAAATGTCAGATTAATTaGAGAGTCCCAGTCCGTAAT +
Preference number: 4 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEEKCQIN*RVPVRN
Trigger: ATTACGGACTGGGACTCTTCAATTAATCTGACATTT...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTATGCCACAAGATCTTTaGCCATTTTCACTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RPFRQNSIILAISDRDAGMPQDL*PFSLQR
Trigger: TCTCTGAAGTGAAAATGGTCAAAGATCTTGTGGCAT...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGTCTTATCTTCTTAGCGGATTGGCAGGTTTTCTCTaGTTGCCGCTTCCACTAGAT +
Preference number: 4 (lower is better)
Translates to: AENCIGISSLSRSYLLSGLAGFL*LPLPLD
Trigger: ATCTAGTGGAAGCGGCAAGCAGAGAAAACCTGCCAA...TCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp GACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGAAGACCTGAGCCAATaGTTTCTTGACTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: DPSGRIPSFSQLVTGTLVEDLSQ*FLDFFF
Trigger: GAAGAAAAAGTCAAGAAAGCATTGGCTCAGGTCTTC...AACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR GCA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGGAAGACCTGAGCCAATaGTTTCTTGACTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWEDLSQ*FLDFFF
Trigger: GAAGAAAAAGTCAAGAAAGCATTGGCTCAGGTCTTC...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp TTCAGTTTTATCTCTTTATTACCAACATGGATGCCAGAAACTTCCATCGACCATCAGCCCGTTTCACTTTaGCCAGCACCTGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: FSFISLLPTWMPETSIDHQPVSL*PAPAPI
Trigger: GATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGCTG...ATGGTCGATGGAAGTTTCTGGCATCCATGTTGGTAATAAAGAGATAAAACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTGGAGTCAAGGCAAAGTaGGGAGCAACAGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTIGVKAK*GATGAS
Trigger: GCTTGCCCCTGTTGCTCCCCACTTTGCCTTGACTCC...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAATCACATCATTTGTGTaGCCTGGGAGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTITSFV*PGSWGS
Trigger: ACTTCCCCAGCTCCCAGGCCACACAAATGATGTGAT...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp CAGAAACTTCCATCGACCATACACCTACAAACATGTGGGTTGCAAGTGGTTCGTATAGGGCTTTGGCTGTaGTGTCACTGGATTGTGAAA +
Preference number: 4 (lower is better)
Translates to: QKLPSTIHLQTCGLQVVRIGLWL*CHWIVK
Trigger: TTTCACAATCCAGTGACACCACAGCCAAAGCCCTAT...ACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp GTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATCAGGGACGCTGGTTGTaGAGGAGTATTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: VGGIRKITNRGLRINGNDQGRWL*RSIWSG
Trigger: ACCACTCCAAATACTCCTCCACAACCAGCGTCCCTG...ATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATTCCACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CAA 72 bp ACACCTACAAACATGTGGGTTGCAAGTGGTTCGTTTTaGCCCTGGAGTTCTTACAAAGTTTCACTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TPTNMWVASGSF*PWSSYKVSLGG
Trigger: CCCACCTAGTGAAACTTTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp GCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGTCTTATCTTCTTAGCGGAGAGATCAGTGAGGCCTaGAGACATGTGTTCAATATC +
Preference number: 4 (lower is better)
Translates to: AENCIGISSLSRSYLLSGEISEA*RHVFNI
Trigger: GATATTGAACACATGTCTTCAGGCCTCACTGATCTC...TCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp AGCCTCAGACCCTATTTGCAATGTTCCCTCCTCAGTTATATAATCCTAAGGAACCCGTGTAGTTCATGTTaGCCATCCATTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: SLRPYLQCSLLSYIILRNPCSSC*PSIHTA
Trigger: AGCTGTGTGAATGGATGGGCAACATGAACTACACGG...GTTCCTTAGGATTATATAACTGAGGAGGGAACATTGCAAATAGGGTCTGAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGGGGTCTAGGTTTTTCTaGTATGGTCAGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGGSRFF*YGQMEN
Trigger: GTTTTCCATCTGACCATAGCAGAAAAACCTAGACCC...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp TTCAGTTTTATCTCTTTATTACCAACATGGATGCCAGAAACTTCCATCGACCATGCTTCAGGAGTCGTGTaGACAGCACGATTACCTGGG +
Preference number: 4 (lower is better)
Translates to: FSFISLLPTWMPETSIDHASGVV*TARLPG
Trigger: CCCAGGTAATCGTGCTGTCCACACGACTCCTGAAGC...ATGGTCGATGGAAGTTTCTGGCATCCATGTTGGTAATAAAGAGATAAAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
3UTR CAA 72 bp AAACTTCCATCGACCATACACCTACAAACATGTGGGTaGCAAGTGGTTCGTTTTTGCCCTGGAGTTCTTACA +
Preference number: 4 (lower is better)
Translates to: KLPSTIHLQTCG*QVVRFCPGVLT
Trigger: TGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGTGTATGGTCGATGGAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp GATAAATGGAAACGATCACTAATTGGACTCGCCAAAAGACAGACTGTCGCCTTCTTTTTGCAGCAAAGGTaGCAATCCAGATTCCTCACA +
Preference number: 4 (lower is better)
Translates to: DKWKRSLIGLAKRQTVAFFLQQR*QSRFLT
Trigger: TGTGAGGAATCTGGATTGTCACCTTTGCTGCAAAAA...GAAGGCGACAGTCTGTCTTTTGGCGAGTCCAATTAGTGATCGTTTCCATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp GTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATCTCCTCAGTATGGAGTaGAGTGAGCGCTATCATGTT +
Preference number: 4 (lower is better)
Translates to: VGGIRKITNRGLRINGNDLLSME*SERYHV
Trigger: AACATGATAGCGCTCACTGCACTCCATACTGAGGAG...ATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATTCCACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp GTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATGCCTCAGACCCTATTTaGAATGTTCCCTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: VGGIRKITNRGLRINGNDASDPI*NVPSSV
Trigger: AACTGAGGAGGGAACATTGCAAATAGGGTCTGAGGC...ATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATTCCACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGATCTTTATTACCAACATaGATGCCAGAAACTTCCATC +
Preference number: 4 (lower is better)
Translates to: SIILAISDRDAGCGGVFGSLLPT*MPETSI
Trigger: GATGGAAGTTTCTGGCATCCATGTTGGTAATAAAGA...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGGAAGTGCTGAAATaGTCTTCTCTACTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTGEVLK*SSLLSC
Trigger: ACAACTTAGTAGAGAAGATCATTTCAGCACTTCCCC...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGAGTTGTAATCTACCAACACTTGCCAACAGGCTTTTATTTAGAACTAATGAACGGTGTCACTGGATTGTaGAAGACAGCCTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: RVVIYQHLPTGFYLELMNGVTGL*KTAWCN
Trigger: GTTGCACCAGGCTGTCTTTCACAATCCAGTGACACC...GTTCATTAGTTCTAAATAAAAGCCTGTTGGCAAGTGTTGGTAGATTACAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGAAATGTCAGATTAATTaGAGAGTCCCAGTCCGTAAT +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGKCQIN*RVPVRN
Trigger: ATTACGGACTGGGACTCTTCAATTAATCTGACATTT...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAAGCAATATCCCGAAGTaGAGTAAAGAGTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTSNIPK*SKEFIH
Trigger: GTGGATGAACTCTTTACTTCACTTCGGGATATTGCT...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR TCA 90 bp TACAATTTAGACTCCCTGGGACCAGGTATCTTGTACTGGAGTCTTTCTTTGGAGATGCCACAAGATCTTTaGCCATTTTCACTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: YNLDSLGPGILYWSLSLEMPQDL*PFSLQR
Trigger: TCTCTGAAGTGAAAATGGTCAAAGATCTTGTGGCAT...CTCCAAAGAAAGACTCCAGTACAAGATACCTGGTCCCAGGGAGTCTAAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp AGAGTTGTAATCTACCAACACTTGCCAACAGGCTTTTATTTAGAACTAATGAACGCGCTATTAAGGAGGTaGACATCCTGGGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: RVVIYQHLPTGFYLELMNALLRR*TSWGSS
Trigger: ACTGCTACCCCAGGATGTGCACCTCCTTAATAGCGC...GTTCATTAGTTCTAAATAAAAGCCTGTTGGCAAGTGTTGGTAGATTACAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp CAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATCACTAATTGGAATGATTTACAACACATaGAGGCTACCAGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QEDHKQRVKDKWKRSLIGMIYNT*RLPALP
Trigger: GGGCAGTGCTGGTAGCCTGCATGTGTTGTAAATCAT...TCCAATTAGTGATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp AGCCTCAGACCCTATTTGCAATGTTCCCTCCTCAGTTATATAATCCTAAGGAACTATTACCAACATGGATaGCAGAAACTTCCATCGACC +
Preference number: 4 (lower is better)
Translates to: SLRPYLQCSLLSYIILRNYYQHG*QKLPST
Trigger: GGTCGATGGAAGTTTCTGGCATCCATGTTGGTAATA...GTTCCTTAGGATTATATAACTGAGGAGGGAACATTGCAAATAGGGTCTGAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGCATCCACGGCAATTTTaGATTTGTGAAATGTCAGAT +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGHPRQF*ICEMSD
Trigger: ATCTGACATTTCACAAATCCAAAATTGCCGTGGATG...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CCA 90 bp ACCTACAAACATGTGGGTTGCAAGTGGTTCGTTTTTGCCCTGGAGTTCTTACAAAATATCAACGGAATCTaGCCTCTCGGGATGAAATAT +
Preference number: 4 (lower is better)
Translates to: TYKHVGCKWFVFALEFLQNINGI*PLGMKY
Trigger: ATATTTCATCCCGAGAGGCCAGATTCCGTTGATATT...TTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTACTAAGTTGTCTCCATaGTGTCCAACTGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTITKLSP*CPTAPV
Trigger: CACAGGAGCAGTTGGACATCATGGAGACAACTTAGT...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR GCA 90 bp TTTAGAACTAATGAACTTGTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTATTGGCAGGTTTTCTCTaGTTGCCGCTTCCACTAGAT +
Preference number: 4 (lower is better)
Translates to: FRTNELVGGIRKITNRGLLAGFL*LPLPLD
Trigger: ATCTAGTGGAAGCGGCAAGCAGAGAAAACCTGCCAA...TAACCCTCTGTTTGTGATCTTCCTGATTCCACCTACAAGTTCATTAGTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp AGAGTTGTAATCTACCAACACTTGCCAACAGGCTTTTATTTAGAACTAATGAACCTTCCCATAGGGCTTTaGCTGTGGTGTCACTGGATT +
Preference number: 4 (lower is better)
Translates to: RVVIYQHLPTGFYLELMNLPIGL*LWCHWI
Trigger: AATCCAGTGACACCACAGCCAAAGCCCTATGGGAAG...GTTCATTAGTTCTAAATAAAAGCCTGTTGGCAAGTGTTGGTAGATTACAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTGAAAGTTGTCCCACTTaGCAGTCTGTGGGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTIESCPT*QSVGVS
Trigger: TGAAACACCCACAGACTGCCAAGTGGGACAACTTTC...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGAGGGTTAAGGATAAATaGAAACGATCACTAATTGGA +
Preference number: 4 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGRVKDK*KRSLIG
Trigger: TCCAATTAGTGATCGTTTCCATTTATCCTTAACCCT...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTGGGGAAGTGCTGAAATaGTCTTCTCTACTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTIGEVLK*SSLLSC
Trigger: ACAACTTAGTAGAGAAGATCATTTCAGCACTTCCCC...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR TCA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTTCGGCATTTCCAGCTTaGGTAGGTCTTATCTTCTTA +
Preference number: 4 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTISAFPA*VGLIFL
Trigger: TAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGA...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp GTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATCATCCACGGCAATTTTaGATTTGTGAAATGTCAGAT +
Preference number: 4 (lower is better)
Translates to: VGGIRKITNRGLRINGNDHPRQF*ICEMSD
Trigger: ATCTGACATTTCACAAATCCAAAATTGCCGTGGATG...ATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATTCCACCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp TTTGCAATGTTCCCTCCTCAGTTATATAATCCTAAGGAACATCAAATTTTCCCCACACCTACAAACATGTaGGTTGCAAGTGGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: FAMFPPQLYNPKEHQIFPTPTNM*VASGSF
Trigger: AAACGAACCACTTGCAACCCACATGTTTGTAGGTGT...GGGGAAAATTTGATGTTCCTTAGGATTATATAACTGAGGAGGGAACATTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CCA 90 bp AGAGTTGTAATCTACCAACACTTGCCAACAGGCTTTTATTTAGAACTAATGAACAACTTGCTTCAACAATaGCTTATAAGATGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RVVIYQHLPTGFYLELMNNLLQQ*LIRCLV
Trigger: CACCAGGCATCTTATAAGCCATTGTTGAAGCAAGTT...GTTCATTAGTTCTAAATAAAAGCCTGTTGGCAAGTGTTGGTAGATTACAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS GCA 90 bp CTCCAGCTGCTCGAACACCGGCTGCTGCCCCTCCATCTCGGCCGCTaGCGCCGCTGGGACATGATTAGCTGTGAGGTGGACAGCGTGGCT +
Preference number: 5 (lower is better)
Translates to: LQLLEHRLLPLHLGR*RRWDMISCEVDSVA
Trigger: AGCCACGCTGTCCACCTCACAGCTAATCATGTCCCAGCGGCGGCAGCGGCCGAGATGGAGGGGCAGCAGCCGGTGTTCGAGCAGCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS CCA 90 bp CTCGAACACCGGCTGCTGCCCCTCCATCTCGGCCGCTGCCGCCGCTaGGACATGATTAGCTGTGAGGTGGACAGCGTGGCTCACGGTTGT +
Preference number: 5 (lower is better)
Translates to: LEHRLLPLHLGRCRR*DMISCEVDSVAHGC
Trigger: ACAACCGTGAGCCACGCTGTCCACCTCACAGCTAATCATGTCCCAGCGGCGGCAGCGGCCGAGATGGAGGGGCAGCAGCCGGTGTTCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS CCA 90 bp ACCACAGCCCGTTTCACTTTGGCCAGCACCTGCTCCCATCCTTGCTaGGTAAAGGACAGTACGCCCGAGGCGCTCATGGTTGGGGATTCG +
Preference number: 5 (lower is better)
Translates to: TTARFTLASTCSHPC*VKDSTPEALMVGDS
Trigger: CGAATCCCCAACCATGAGCGCCTCGGGCGTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGCTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS TCA 90 bp TGGACAGCGTGGCTCACGGTTGTGACCACCACACAATACTGGAAGTaGCTGCGGCAGATGATGTCCCGTAGGATCTCCACGGTCCGGCCT +
Preference number: 5 (lower is better)
Translates to: WTAWLTVVTTTQYWK*LRQMMSRRISTVRP
Trigger: AGGCCGGACCGTGGAGATCCTACGGGACATCATCTGCCGCAGTCACTTCCAGTATTGTGTGGTGGTCACAACCGTGAGCCACGCTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS GCA 90 bp CCGAGGCGCTCATGGTTGGGGATTCGCAGACTTGGGAAACTACGGTaGAGGAACTTCTTTCAGAACTCACCGCTTCCGGAAATTGGGCTC +
Preference number: 5 (lower is better)
Translates to: PRRSWLGIRRLGKLR*RNFFQNSPLPEIGL
Trigger: GAGCCCAATTTCCGGAAGCGGTGAGTTCTGAAAGAAGTTCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCAACCATGAGCGCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CCA 90 bp AAGGACAGTACGCCCGAGGCGCTCATGGTTGGGGATTCGCAGACTTaGGAAACTACGGTGCAGGAACTTCTTTCAGAACTCACCGCTTCC +
Preference number: 5 (lower is better)
Translates to: KDSTPEALMVGDSQT*ETTVQELLSELTAS
Trigger: GGAAGCGGTGAGTTCTGAAAGAAGTTCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCAACCATGAGCGCCTCGGGCGTACTGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CCA 90 bp CCATCCTTGCTGGGTAAAGGACAGTACGCCCGAGGCGCTCATGGTTaGGGATTCGCAGACTTGGGAAACTACGGTGCAGGAACTTCTTTC +
Preference number: 5 (lower is better)
Translates to: PSLLGKGQYARGAHG*GFADLGNYGAGTSF
Trigger: GAAAGAAGTTCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCAACCATGAGCGCCTCGGGCGTACTGTCCTTTACCCAGCAAGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CCA 90 bp AGCTTCCTCTTGTCCGGTCGGGCGCTATTAAGGAGGTGCACATCCTaGGGTAGCAGTGGGAAAAGGGATGCAAAAGCTGGAGTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SFLLSGRALLRRCTS*GSSGKRDAKAGVKA
Trigger: TGCCTTGACTCCAGCTTTTGCATCCCTTTTCCCACTGCTACCCCAGGATGTGCACCTCCTTAATAGCGCCCGACCGGACAAGAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS-3UTR CAA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTCCGAGGCGCTCATGGTaGGGGATTCGCAGACTTGGG +
Preference number: 5 (lower is better)
Translates to: RPFRQNSIILAISDRDAGPRRSW*GIRRLG
Trigger: CCCAAGTCTGCGAATCCCCAACCATGAGCGCCTCGG...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CCA 90 bp ACTACGGTGCAGGAACTTCTTTCAGAACTCACCGCTTCCGGAAATTaGGCTCCGGGAGACTTTGACAGTCTCCACAGTACACGTGGTCGG +
Preference number: 5 (lower is better)
Translates to: TTVQELLSELTASGN*APGDFDSLHSTRGR
Trigger: CCGACCACGTGTACTGTGGAGACTGTCAAAGTCTCCCGGAGCCCAATTTCCGGAAGCGGTGAGTTCTGAAAGAAGTTCCTGCACCGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTTGGCTCCACCACCAATaGCGTCGGGCTCGAACTCTC +
Preference number: 5 (lower is better)
Translates to: DPSGRIPSFSQLVTGTLVWLHHQ*RRARTL
Trigger: GAGAGTTCGAGCCCGACGCAATTGGTGGTGGAGCCA...AACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS GCA 90 bp AAATGTTCACACAGAGAACTGAGGCCTGACACTAGGCATCTGATCTaGAGCAGCAGCTCTGGGGTTAGCGTAGTGGAGTCCACATCACCC +
Preference number: 5 (lower is better)
Translates to: KCSHRELRPDTRHLI*SSSSGVSVVESTSP
Trigger: GGGTGATGTGGACTCCACTACGCTAACCCCAGAGCTGCTGCTGCAGATCAGATGCCTAGTGTCAGGCCTCAGTTCTCTGTGTGAACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1
CDS-3UTR CAA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGGGCTCCGGGAGACTTaGACAGTCTCCACAGTACAC +
Preference number: 5 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVGLRET*TVSTVH
Trigger: GTGTACTGTGGAGACTGTCAAAGTCTCCCGGAGCCC...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTGGGGATTCGCAGACTaGGGAAACTACGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEEWGFAD*GNYGAG
Trigger: TCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCA...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp AGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAACAGCCCGTTTCACTTaGGCCAGCACCTGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: RQNSIILAISDRDAGCGGTARFT*ASTCSH
Trigger: ATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGCTGT...TCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGATGGCTCCACCACCAATaGCGTCGGGCTCGAACTCTC +
Preference number: 5 (lower is better)
Translates to: SIILAISDRDAGCGGVFGWLHHQ*RRARTL
Trigger: GAGAGTTCGAGCCCGACGCAATTGGTGGTGGAGCCA...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp CAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAAGCACAAACACTGCCTaGGGCTGCTTGGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: QLVTGTLVVEEYLEWWQKSTNTA*GCLAPP
Trigger: TGGTGGAGCCAAGCAGCCCAAGGCAGTGTTTGTGCT...TTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp TCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGTGGGTGTTTCAACGTTaGAGCTGTGGCCAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SQLVTGTLVVEEYLEWWQWVFQR*SCGQSK
Trigger: CTTGGACTGGCCACAGCTCAAACGTTGAAACACCCA...CTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGCACCTGCTCCCATCCTaGCTGGGTAAAGGACAGTAC +
Preference number: 5 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVHLLPS*LGKGQY
Trigger: GTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGTG...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp ATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAATCTTCCCAGCTTCCTCTaGTCCGGTCGGGCGCTATTA +
Preference number: 5 (lower is better)
Translates to: ISDRDAGCGGVFGVVAENLPSFL*SGRALL
Trigger: TAATAGCGCCCGACCGGACAAGAGGAAGCTGGGAAG...ATTTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS TCA 90 bp TCTTCCTGTTCTTTGCAGGGGCATAATTGGCCAGATCCGCAGCGATaGCCTGACTTAAGGAACCTACAGCAAAACACTCCTCCCGTACTC +
Preference number: 5 (lower is better)
Translates to: SSCSLQGHNWPDPQR*PDLRNLQQNTPPVL
Trigger: GAGTACGGGAGGAGTGTTTTGCTGTAGGTTCCTTAAGTCAGGTCATCGCTGCGGATCTGGCCAATTATGCCCCTGCAAAGAACAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1
CDS CCA 90 bp AGTTGTCCCACTTGGCAGTCTGTGGGTGTTTCAACGTTTGAGCTGTaGCCAGTCCAAGCTGGAGGAGGCCACAATGATTCATTAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SCPTWQSVGVSTFEL*PVQAGGGHNDSLEL
Trigger: AAGCTCTAATGAATCATTGTGGCCTCCTCCAGCTTGGACTGGCCACAGCTCAAACGTTGAAACACCCACAGACTGCCAAGTGGGACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS-3UTR CAA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACAGCCCGTTTCACTTaGGCCAGCACCTGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGTARFT*ASTCSH
Trigger: ATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGCTGT...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGCAGGTTTTCTCTGCTaGCCGCTTCCACTAGATGTC +
Preference number: 5 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLAGFLC*PLPLDV
Trigger: GACATCTAGTGGAAGCGGCAAGCAGAGAAAACCTGC...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACTGGGGATTCGCAGACTaGGGAAACTACGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: VSRPFRQNSIILAISDRDWGFAD*GNYGAG
Trigger: TCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCA...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACACTTCCCAGCTTCCTCTaGTCCGGTCGGGCGCTATTA +
Preference number: 5 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTLPSFL*SGRALL
Trigger: TAATAGCGCCCGACCGGACAAGAGGAAGCTGGGAAG...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp AGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTCTTCTTCCTGTTCTTaGCAGGGGCATAATTGGCCA +
Preference number: 5 (lower is better)
Translates to: RPFRQNSIILAISDRDAGSSSCS*QGHNWP
Trigger: TGGCCAATTATGCCCCTGCAAAGAACAGGAAGAAGA...ACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGCTCCCCATACTCATCTaGATTGGCAGGTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLLPILI*IGRFSL
Trigger: CAGAGAAAACCTGCCAATCAAGATGAGTATGGGGAG...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GGAGTATTTGGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGAGAAAGTTGTCCCACTaGGCAGTCTGTGGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: GVFGVVAENCIGISSLSRRKLSH*AVCGCF
Trigger: GAAACACCCACAGACTGCCAAGTGGGACAACTTTCT...CCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTCCAAATACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGTCAAAAGCCAGAAAGTaGTCCCACTTGGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLSKARK*SHLAVC
Trigger: ACAGACTGCCAAGTGGGACAACTTTCTGGCTTTTGA...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp AGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGATCAAAAGCCAGAAAGTaGTCCCACTTGGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: RQNSIILAISDRDAGCGGSKARK*SHLAVC
Trigger: ACAGACTGCCAAGTGGGACAACTTTCTGGCTTTTGA...TCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTTCACACAGGTCTTaGTCTACCGTGAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: VSRPFRQNSIILAISDRDASHRS*STVSSP
Trigger: TGGAGAGCTCACGGTAGACAAAGACCTGTGTGAAGC...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp CCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGCTGGGACCAGGTATCTaGTACTGGAGTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: PSFSQLVTGTLVVEEYLELGPGI*YWSLSL
Trigger: CAAAGAAAGACTCCAGTACAAGATACCTGGTCCCAG...CTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS GCA 90 bp GTAGGTCTTATCTTCTTAGCGGATGCTCAGAAGCCAAGGTCTGGATaGAGTCGGTCAGTTGCAAATAACAGCTCAGGAATGTTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VGLIFLADAQKPRSG*SRSVANNSSGMLSG
Trigger: GCCACTTAACATTCCTGAGCTGTTATTTGCAACTGACCGACTGCATCCAGACCTTGGCTTCTGAGCATCCGCTAAGAAGATAAGACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATGGGCTCCGGGAGACTTaGACAGTCTCCACAGTACAC +
Preference number: 5 (lower is better)
Translates to: VGGIRKITNRGLRINGNDGLRET*TVSTVH
Trigger: GTGTACTGTGGAGACTGTCAAAGTCTCCCGGAGCCC...ATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATTCCACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGCTTCCCATAGGGCTTaGGCTGTGGTGTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTASHRA*AVVSLD
Trigger: ATCCAGTGACACCACAGCCAAAGCCCTATGGGAAGC...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTCCATCACTGCCTCTTaGTGCTTAGTGTTCAGTAAA +
Preference number: 5 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEESITAS*CLVFSK
Trigger: TTTACTGAACACTAAGCACAAAGAGGCAGTGATGGA...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GGAGTATTTGGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGCTCCCCATACTCATCTaGATTGGCAGGTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GVFGVVAENCIGISSLSRLPILI*IGRFSL
Trigger: CAGAGAAAACCTGCCAATCAAGATGAGTATGGGGAG...CCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTCCAAATACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp TACAATTTAGACTCCCTGGGACCAGGTATCTTGTACTGGAGTCTTTCTTTGGAGTGGGTGTTTCAACGTTaGAGCTGTGGCCAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: YNLDSLGPGILYWSLSLEWVFQR*SCGQSK
Trigger: CTTGGACTGGCCACAGCTCAAACGTTGAAACACCCA...CTCCAAAGAAAGACTCCAGTACAAGATACCTGGTCCCAGGGAGTCTAAATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGAGAAAGTTGTCCCACTaGGCAGTCTGTGGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGRKLSH*AVCGCF
Trigger: GAAACACCCACAGACTGCCAAGTGGGACAACTTTCT...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTACTGGAGTCTTTCTTaGGAGGGGAGAAAACCTTTT +
Preference number: 5 (lower is better)
Translates to: GRIPSFSQLVTGTLVVEEYWSLS*EGRKPF
Trigger: AAAAGGTTTTCTCCCCTCCAAAGAAAGACTCCAGTA...CTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGCAAAGTCCACAGGGGTaGCTGTTACAATTTAGACTC +
Preference number: 5 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWQSPQG*LLQFRL
Trigger: GAGTCTAAATTGTAACAGCAACCCCTGTGGACTTTG...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGGCAAGTGGTTCGTTTTaGCCCTGGAGTTCTTACAAA +
Preference number: 5 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWASGSF*PWSSYK
Trigger: TTTGTAAGAACTCCAGGGCAAAAACGAACCACTTGC...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS TCA 90 bp GAGTATTTGGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTTaGGTAGGTCTTATCTTCTTAGCGGATGCTCAGAAGCCAAGGTCT +
Preference number: 5 (lower is better)
Translates to: EYLEWWQKIASAFPA*VGLIFLADAQKPRS
Trigger: AGACCTTGGCTTCTGAGCATCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTCCAAATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS GCA 90 bp TTCCTCACAGAAGACCTGAGCCAATGCTTTCTTGACTTTTTCTTCTaGTTCACACAGGTCTTTGTCTACCGTGAGCTCTCCAGTGACAGA +
Preference number: 5 (lower is better)
Translates to: FLTEDLSQCFLDFFF*FTQVFVYRELSSDR
Trigger: TCTGTCACTGGAGAGCTCACGGTAGACAAAGACCTGTGTGAAGCAGAAGAAAAAGTCAAGAAAGCATTGGCTCAGGTCTTCTGTGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTAAGGATAAATGGAAACGATCACCTGCTCCCATCCTaGCTGGGTAAAGGACAGTAC +
Preference number: 5 (lower is better)
Translates to: VGGIRKITNRGLRINGNDHLLPS*LGKGQY
Trigger: GTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGTG...ATCGTTTCCATTTATCCTTAACCCTCTGTTTGTGATCTTCCTGATTCCACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp GTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACTTAACACAACGGACATaGCTGACTCCCCAATGCTCT +
Preference number: 5 (lower is better)
Translates to: VSRPFRQNSIILAISDRDLTQRT*LTPQCS
Trigger: AGAGCATTGGGGAGTCAGCAATGTCCGTTGTGTTAA...GTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp AGTAGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGCTTCACACAGGTCTTaGTCTACCGTGAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SRYQDPSGRIPSFSQLVTASHRS*STVSSP
Trigger: TGGAGAGCTCACGGTAGACAAAGACCTGTGTGAAGC...TGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp ATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGATGCCACAAGATCTTaGACCATTTTCACTTCAGAG +
Preference number: 5 (lower is better)
Translates to: ILAISDRDAGCGGVFGVVDATRS*TIFTSE
Trigger: CTCTGAAGTGAAAATGGTCAAAGATCTTGTGGCATC...CACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp TCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGATCGGCATTTCCAGCTaGAGTAGGTCTTATCTTCTT +
Preference number: 5 (lower is better)
Translates to: SFSQLVTGTLVVEEYLEWIGISS*SRSYLL
Trigger: AAGAAGATAAGACCTACTCAAGCTGGAAATGCCGAT...CCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp ATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAGTGGTGGCAGAAAATCTACAAACATGTGGGTaGCAAGTGGTTCGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: ISDRDAGCGGVFGVVAENLQTCG*QVVRFC
Trigger: GCAAAAACGAACCACTTGCAACCCACATGTTTGTAG...ATTTTCTGCCACCACTCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS GCA 90 bp ACAGCCTGGTGCAACCACATTATAATTTTCCTCCTCAGTATGGAGTaGAGTGAGCGCTATCATGTTAACCATCACATCATTTGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: TAWCNHIIIFLLSME*SERYHVNHHIICVA
Trigger: GGCCACACAAATGATGTGATGGTTAACATGATAGCGCTCACTGCACTCCATACTGAGGAGGAAAATTATAATGTGGTTGCACCAGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1
CDS-3UTR CAA 90 bp TCCATCATTCTCGCAATTAGTGACAGGGACGCTGGTTGTGGAGGAGTATTTGGAATCGGCATTTCCAGCTaGAGTAGGTCTTATCTTCTT +
Preference number: 5 (lower is better)
Translates to: SIILAISDRDAGCGGVFGIGISS*SRSYLL
Trigger: AAGAAGATAAGACCTACTCAAGCTGGAAATGCCGAT...TCCAAATACTCCTCCACAACCAGCGTCCCTGTCACTAATTGCGAGAATGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp GCAGAAAATTGCATCGGCATTTCCAGCTTGAGTAGGTCTTATCTTCTTAGCGGAAGTGGTGGCAGAAAATaGCATCGGCATTTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: AENCIGISSLSRSYLLSGSGGRK*HRHFQL
Trigger: AAGCTGGAAATGCCGATGCAATTTTCTGCCACCACT...TCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp ACCTACAAACATGTGGGTTGCAAGTGGTTCGTTTTTGCCCTGGAGTTCTTACAAAGTGGTGGCAGAAAATaGCATCGGCATTTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: TYKHVGCKWFVFALEFLQSGGRK*HRHFQL
Trigger: AAGCTGGAAATGCCGATGCAATTTTCTGCCACCACT...TTGTAAGAACTCCAGGGCAAAAACGAACCACTTGCAACCCACATGTTTGTAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp CAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGACGCTGGAACAATGCAGTCCTTaGTTATGGCAGGATGATTTA +
Preference number: 5 (lower is better)
Translates to: QDPSGRIPSFSQLVTGTLEQCSP*LWQDDL
Trigger: TAAATCATCCTGCCATAACAAAGGACTGCATTGTTC...CAGCGTCCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS TCA 90 bp CTTCATGAACATGCTAAATCCAGTTTTAAGGAGATCAGTGAGGCCTaGAGACATGTGTTCAATATCAACGGAATCTGGCCTCTCGGGATG +
Preference number: 5 (lower is better)
Translates to: LHEHAKSSFKEISEA*RHVFNINGIWPLGM
Trigger: CATCCCGAGAGGCCAGATTCCGTTGATATTGAACACATGTCTTCAGGCCTCACTGATCTCCTTAAAACTGGATTTAGCATGTTCATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTGCTTCCCATAGGGCTTaGGCTGTGGTGTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTIASHRA*AVVSLD
Trigger: ATCCAGTGACACCACAGCCAAAGCCCTATGGGAAGC...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp AGGTATCAAGACCCTTCAGGCAGAATTCCATCATTCTCGCAATTAGTGACAGGGGATGCCACAAGATCTTaGACCATTTTCACTTCAGAG +
Preference number: 5 (lower is better)
Translates to: RYQDPSGRIPSFSQLVTGDATRS*TIFTSE
Trigger: CTCTGAAGTGAAAATGGTCAAAGATCTTGTGGCATC...CCCTGTCACTAATTGCGAGAATGATGGAATTCTGCCTGAAGGGTCTTGATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS TCA 90 bp CTTAAACTGTTTCAGGAGACTCCGAGCTCCAGCAATATCCCGAAGTaGAGTAAAGAGTTCATCCACGGCAATTTTGGATTTGTGAAATGT +
Preference number: 5 (lower is better)
Translates to: LKLFQETPSSSNIPK*SKEFIHGNFGFVKC
Trigger: ACATTTCACAAATCCAAAATTGCCGTGGATGAACTCTTTACTTCACTTCGGGATATTGCTGGAGCTCGGAGTCTCCTGAAACAGTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS-3UTR CAA 90 bp AGCCTCAGACCCTATTTGCAATGTTCCCTCCTCAGTTATATAATCCTAAGGAACTCCATCACTGCCTCTTaGTGCTTAGTGTTCAGTAAA +
Preference number: 5 (lower is better)
Translates to: SLRPYLQCSLLSYIILRNSITAS*CLVFSK
Trigger: TTTACTGAACACTAAGCACAAAGAGGCAGTGATGGA...GTTCCTTAGGATTATATAACTGAGGAGGGAACATTGCAAATAGGGTCTGAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp CCTCCTCAGTTATATAATCCTAAGGAACATCAAATTTTCCCCACACTCATAATTGCAGGTTTTCTCTGCTaGCCGCTTCCACTAGATGTC +
Preference number: 5 (lower is better)
Translates to: PPQLYNPKEHQIFPTLIIAGFLC*PLPLDV
Trigger: GACATCTAGTGGAAGCGGCAAGCAGAGAAAACCTGC...AATTATGAGTGTGGGGAAAATTTGATGTTCCTTAGGATTATATAACTGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp ATATTTCAATCAAAACTCATACCCACAAAGTCCACAGGGGTTGCTGTTACAATTTCTTCTTCCTGTTCTTaGCAGGGGCATAATTGGCCA +
Preference number: 5 (lower is better)
Translates to: IFQSKLIPTKSTGVAVTISSSCS*QGHNWP
Trigger: TGGCCAATTATGCCCCTGCAAAGAACAGGAAGAAGA...AATTGTAACAGCAACCCCTGTGGACTTTGTGGGTATGAGTTTTGATTGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp TTTAGAACTAATGAACTTGTAGGTGGAATCAGGAAGATCACAAACAGAGGGTTATTAACACAACGGACATaGCTGACTCCCCAATGCTCT +
Preference number: 5 (lower is better)
Translates to: FRTNELVGGIRKITNRGLLTQRT*LTPQCS
Trigger: AGAGCATTGGGGAGTCAGCAATGTCCGTTGTGTTAA...TAACCCTCTGTTTGTGATCTTCCTGATTCCACCTACAAGTTCATTAGTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS-3UTR CAA 90 bp CCTCCTCAGTTATATAATCCTAAGGAACATCAAATTTTCCCCACACTCATAATTTATTTCCTCCACAACTaGCTTCAACAATGGCTTATA +
Preference number: 5 (lower is better)
Translates to: PPQLYNPKEHQIFPTLIIYFLHN*LQQWLI
Trigger: TATAAGCCATTGTTGAAGCAAGTTGTGGAGGAAATA...AATTATGAGTGTGGGGAAAATTTGATGTTCCTTAGGATTATATAACTGAGGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS CCA 72 bp CGGCTGCTGCCCCTCCATCTCGGCCGCTGCCGCCGCTaGGACATGATTAGCTGTGAGGTGGACAGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: RLLPLHLGRCRR*DMISCEVDSVA
Trigger: AGCCACGCTGTCCACCTCACAGCTAATCATGTCCCAGCGGCGGCAGCGGCCGAGATGGAGGGGCAGCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS GCA 72 bp CTCGAACACCGGCTGCTGCCCCTCCATCTCGGCCGCTaGCGCCGCTGGGACATGATTAGCTGTGAGGTGGAC +
Preference number: 6 (lower is better)
Translates to: LEHRLLPLHLGR*RRWDMISCEVD
Trigger: GTCCACCTCACAGCTAATCATGTCCCAGCGGCGGCAGCGGCCGAGATGGAGGGGCAGCAGCCGGTGTTCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS GCA 72 bp GCCCGTTTCACTTTGGCCAGCACCTGCTCCCATCCTTaGTGGGTAAAGGACAGTACGCCCGAGGCGCTCATG +
Preference number: 6 (lower is better)
Translates to: ARFTLASTCSHP*WVKDSTPEALM
Trigger: CATGAGCGCCTCGGGCGTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CAA 72 bp AGCCCGTTTCACTTTGGCCAGCACCTGCTCCCATCCTaGCTGGGTAAAGGACAGTACGCCCGAGGCGCTCAT +
Preference number: 6 (lower is better)
Translates to: SPFHFGQHLLPS*LGKGQYARGAH
Trigger: ATGAGCGCCTCGGGCGTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS CAA 72 bp GTGGAGTCCACATCACCCAGGCTTCCCAGCTTCCTCTaGTCCGGTCGGGCGCTATTAAGGAGGTGCACATCC +
Preference number: 6 (lower is better)
Translates to: VESTSPRLPSFL*SGRALLRRCTS
Trigger: GGATGTGCACCTCCTTAATAGCGCCCGACCGGACAAGAGGAAGCTGGGAAGCCTGGGTGATGTGGACTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1
CDS CAA 90 bp GTAAACCACAGCCCGTTTCACTTTGGCCAGCACCTGCTCCCATCCTaGCTGGGTAAAGGACAGTACGCCCGAGGCGCTCATGGTTGGGGA +
Preference number: 6 (lower is better)
Translates to: VNHSPFHFGQHLLPS*LGKGQYARGAHGWG
Trigger: TCCCCAACCATGAGCGCCTCGGGCGTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGCTGTGGTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CAA 90 bp GTTAGCGTAGTGGAGTCCACATCACCCAGGCTTCCCAGCTTCCTCTaGTCCGGTCGGGCGCTATTAAGGAGGTGCACATCCTGGGGTAGC +
Preference number: 6 (lower is better)
Translates to: VSVVESTSPRLPSFL*SGRALLRRCTSWGS
Trigger: GCTACCCCAGGATGTGCACCTCCTTAATAGCGCCCGACCGGACAAGAGGAAGCTGGGAAGCCTGGGTGATGTGGACTCCACTACGCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS CAA 90 bp GTTAGCGTAGTGGAGTCCACATCACCCAGGCTTCCCAGCTTCCTCTaGTCCGGTCGGGCGCTATTAAGGAGGTGCACATCCGCTTCCGGA +
Preference number: 6 (lower is better)
Translates to: VSVVESTSPRLPSFL*SGRALLRRCTSASG
Trigger: TCCGGAAGCGGATGTGCACCTCCTTAATAGCGCCCGACCGGACAAGAGGAAGCTGGGAAGCCTGGGTGATGTGGACTCCACTACGCTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503450.1
CDS TCA 72 bp CACATCCGCTTCCGGAAATTGGGCTCCGGGAGACTTTaGCAGTCTCCACAGTACACGTGGTCGGCCTCTGAC +
Preference number: 6 (lower is better)
Translates to: HIRFRKLGSGRL*QSPQYTWSASD
Trigger: GTCAGAGGCCGACCACGTGTACTGTGGAGACTGTCAAAGTCTCCCGGAGCCCAATTTCCGGAAGCGGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503450.1
CDS CCA 72 bp CTGGGTAAAGGACAGTACGCCCGAGGCGCTCATGGTTaGGGATTCGCAGACTTGGGAAACTACGGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: LGKGQYARGAHG*GFADLGNYGAG
Trigger: TCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCAACCATGAGCGCCTCGGGCGTACTGTCCTTTACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS GCA 72 bp AGCTTCCTCTTGTCCGGTCGGGCGCTATTAAGGAGGTaGACATCCTGGGGTAGCAGTGGGAAAAGGGATGCA +
Preference number: 6 (lower is better)
Translates to: SFLLSGRALLRR*TSWGSSGKRDA
Trigger: TGCATCCCTTTTCCCACTGCTACCCCAGGATGTGCACCTCCTTAATAGCGCCCGACCGGACAAGAGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS GCA 72 bp CACAGAGAACTGAGGCCTGACACTAGGCATCTGATCTaGAGCAGCAGCTCTGGGGTTAGCGTAGTGGAGTCC +
Preference number: 6 (lower is better)
Translates to: HRELRPDTRHLI*SSSSGVSVVES
Trigger: GGACTCCACTACGCTAACCCCAGAGCTGCTGCTGCAGATCAGATGCCTAGTGTCAGGCCTCAGTTCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1
CDS GCA 72 bp ACGGGACATGGAACACCTCGGCCGTGTAGTTCATGTTaGCCATCCATTCACACAGCTTCTCCTCCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: TGHGTPRPCSSC*PSIHTASPPAA
Trigger: AGCAGCTGGAGGAGAAGCTGTGTGAATGGATGGGCAACATGAACTACACGGCCGAGGTGTTCCATGTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS CCA 72 bp ACGCCCGAGGCGCTCATGGTTGGGGATTCGCAGACTTaGGAAACTACGGTGCAGGAACTTCTTTCAGAACTC +
Preference number: 6 (lower is better)
Translates to: TPEALMVGDSQT*ETTVQELLSEL
Trigger: GAGTTCTGAAAGAAGTTCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCAACCATGAGCGCCTCGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CAA 90 bp AAAGGACAGTACGCCCGAGGCGCTCATGGTTGGGGATTCGCAGACTaGGGAAACTACGGTGCAGGAACTTCTTTCAGAACTCACCGCTTC +
Preference number: 6 (lower is better)
Translates to: KGQYARGAHGWGFAD*GNYGAGTSFRTHRF
Trigger: GAAGCGGTGAGTTCTGAAAGAAGTTCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCAACCATGAGCGCCTCGGGCGTACTGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS GCA 72 bp GATCCAGGGTTCTGTCCACAAAAACCACTGATGCCCTaGCTGCAGCAGTCTTCTTCCTGTTCTTTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: DPGFCPQKPLMP*LQQSSSCSLQG
Trigger: CCCCTGCAAAGAACAGGAAGAAGACTGCTGCAGGCAGGGCATCAGTGGTTTTTGTGGACAGAACCCTGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1
CDS CCA 72 bp GCGCTATTAAGGAGGTGCACATCCGCTTCCGGAAATTaGGCTCCGGGAGACTTTGACAGTCTCCACAGTACA +
Preference number: 6 (lower is better)
Translates to: ALLRRCTSASGN*APGDFDSLHST
Trigger: TGTACTGTGGAGACTGTCAAAGTCTCCCGGAGCCCAATTTCCGGAAGCGGATGTGCACCTCCTTAATAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503450.1
CDS CAA 72 bp TACGCCCGAGGCGCTCATGGTTGGGGATTCGCAGACTaGGGAAACTACGGTGCAGGAACTTCTTTCAGAACT +
Preference number: 6 (lower is better)
Translates to: YARGAHGWGFAD*GNYGAGTSFRT
Trigger: AGTTCTGAAAGAAGTTCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCAACCATGAGCGCCTCGGGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CCA 72 bp ACTTGGCAGTCTGTGGGTGTTTCAACGTTTGAGCTGTaGCCAGTCCAAGCTGGAGGAGGCCACAATGATTCA +
Preference number: 6 (lower is better)
Translates to: TWQSVGVSTFEL*PVQAGGGHNDS
Trigger: TGAATCATTGTGGCCTCCTCCAGCTTGGACTGGCCACAGCTCAAACGTTGAAACACCCACAGACTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS TCA 72 bp TCCTGTGAGATCCAGGGTTCTGTCCACAAAAACCACTaGTGCCCTGCCTGCAGCAGTCTTCTTCCTGTTCTT +
Preference number: 6 (lower is better)
Translates to: SCEIQGSVHKNH*CPACSSLLPVL
Trigger: AAGAACAGGAAGAAGACTGCTGCAGGCAGGGCATCAGTGGTTTTTGTGGACAGAACCCTGGATCTCACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1
CDS GCA 72 bp TCATGGTTGGGGATTCGCAGACTTGGGAAACTACGGTaGAGGAACTTCTTTCAGAACTCACCGCTTCCGGAA +
Preference number: 6 (lower is better)
Translates to: SWLGIRRLGKLR*RNFFQNSPLPE
Trigger: TTCCGGAAGCGGTGAGTTCTGAAAGAAGTTCCTGCACCGTAGTTTCCCAAGTCTGCGAATCCCCAACCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CCA 72 bp CAGGAACTTCTTTCAGAACTCACCGCTTCCGGAAATTaGGCTCCGGGAGACTTTGACAGTCTCCACAGTACA +
Preference number: 6 (lower is better)
Translates to: QELLSELTASGN*APGDFDSLHST
Trigger: TGTACTGTGGAGACTGTCAAAGTCTCCCGGAGCCCAATTTCCGGAAGCGGTGAGTTCTGAAAGAAGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CAA 90 bp CTTGCCGCTTCCACTAGATGTCTCCGAACTTCCATCACTGCCTCTTaGTGCTTAGTGTTCAGTAAAGCTTCCCATAGGGCTTTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LAASTRCLRTSITAS*CLVFSKASHRALAV
Trigger: CACAGCCAAAGCCCTATGGGAAGCTTTACTGAACACTAAGCACAAAGAGGCAGTGATGGAAGTTCGGAGACATCTAGTGGAAGCGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS TCA 72 bp TCTTTGCAGGGGCATAATTGGCCAGATCCGCAGCGATaGCCTGACTTAAGGAACCTACAGCAAAACACTCCT +
Preference number: 6 (lower is better)
Translates to: SLQGHNWPDPQR*PDLRNLQQNTP
Trigger: AGGAGTGTTTTGCTGTAGGTTCCTTAAGTCAGGTCATCGCTGCGGATCTGGCCAATTATGCCCCTGCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1
CDS CAA 72 bp ACCTGGGTTCCTGGCTTCAACGATGCCACAAGATCTTaGACCATTTTCACTTCAGAGACTGTGACCCCACCT +
Preference number: 6 (lower is better)
Translates to: TWVPGFNDATRS*TIFTSETVTPP
Trigger: AGGTGGGGTCACAGTCTCTGAAGTGAAAATGGTCAAAGATCTTGTGGCATCGTTGAAGCCAGGAACCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CAA 90 bp AGCACGATTACCTGGGTTCCTGGCTTCAACGATGCCACAAGATCTTaGACCATTTTCACTTCAGAGACTGTGACCCCACCTACCACAAAG +
Preference number: 6 (lower is better)
Translates to: STITWVPGFNDATRS*TIFTSETVTPPTTK
Trigger: CTTTGTGGTAGGTGGGGTCACAGTCTCTGAAGTGAAAATGGTCAAAGATCTTGTGGCATCGTTGAAGCCAGGAACCCAGGTAATCGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS TCA 72 bp GTTCTCTGGGTTACAGGCTTAATCATGGGCAGCAGCTaGTTTAACACAACGGACATTGCTGACTCCCCAATG +
Preference number: 6 (lower is better)
Translates to: VLWVTGLIMGSS*FNTTDIADSPM
Trigger: CATTGGGGAGTCAGCAATGTCCGTTGTGTTAAATCAGCTGCTGCCCATGATTAAGCCTGTAACCCAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS GCA 72 bp GGACAGCACGATTACCTGGGTTCCTGGCTTCAACGATaGCACAAGATCTTTGACCATTTTCACTTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: GQHDYLGSWLQR*HKIFDHFHFRD
Trigger: GTCTCTGAAGTGAAAATGGTCAAAGATCTTGTGGCATCGTTGAAGCCAGGAACCCAGGTAATCGTGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS GCA 72 bp ATCTTCTTAGCGGATGCTCAGAAGCCAAGGTCTGGATaGAGTCGGTCAGTTGCAAATAACAGCTCAGGAATG +
Preference number: 6 (lower is better)
Translates to: IFLADAQKPRSG*SRSVANNSSGM
Trigger: CATTCCTGAGCTGTTATTTGCAACTGACCGACTGCATCCAGACCTTGGCTTCTGAGCATCCGCTAAGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS GCA 72 bp ATTTCCAGCTTGAGTAGGTCTTATCTTCTTAGCGGATaGTCAGAAGCCAAGGTCTGGATGCAGTCGGTCAGT +
Preference number: 6 (lower is better)
Translates to: ISSLSRSYLLSG*SEAKVWMQSVS
Trigger: ACTGACCGACTGCATCCAGACCTTGGCTTCTGAGCATCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CAA 90 bp GGAGTATTTGGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTaGAGTAGGTCTTATCTTCTTAGCGGATGCTCAGAAGCCAAGGTC +
Preference number: 6 (lower is better)
Translates to: GVFGVVAENCIGISS*SRSYLLSGCSEAKV
Trigger: GACCTTGGCTTCTGAGCATCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTCCAAATACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS TCA 72 bp GAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTTaGGTAGGTCTTATCTTCTTAGCGGATGCTCAGAAG +
Preference number: 6 (lower is better)
Translates to: EWWQKIASAFPA*VGLIFLADAQK
Trigger: CTTCTGAGCATCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS CAA 72 bp TTGTGCTTAGTGTTCAGTAAAGCTTCCCATAGGGCTTaGGCTGTGGTGTCACTGGATTGTGAAAGACAGCCT +
Preference number: 6 (lower is better)
Translates to: LCLVFSKASHRA*AVVSLDCERQP
Trigger: AGGCTGTCTTTCACAATCCAGTGACACCACAGCCAAAGCCCTATGGGAAGCTTTACTGAACACTAAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS CAA 72 bp TCCACTAGATGTCTCCGAACTTCCATCACTGCCTCTTaGTGCTTAGTGTTCAGTAAAGCTTCCCATAGGGCT +
Preference number: 6 (lower is better)
Translates to: STRCLRTSITAS*CLVFSKASHRA
Trigger: AGCCCTATGGGAAGCTTTACTGAACACTAAGCACAAAGAGGCAGTGATGGAAGTTCGGAGACATCTAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000611795.1
CDS CAA 72 bp GGAGTGGTGGCAGAAAATTGCATCGGCATTTCCAGCTaGAGTAGGTCTTATCTTCTTAGCGGATGCTCAGAA +
Preference number: 6 (lower is better)
Translates to: GVVAENCIGISS*SRSYLLSGCSE
Trigger: TTCTGAGCATCCGCTAAGAAGATAAGACCTACTCAAGCTGGAAATGCCGATGCAATTTTCTGCCACCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS TCA 72 bp AGTGCTGAAATGATCTTCTCTACTAAGTTGTCTCCATaGTGTCCAACTGCTCCTGTGAGATCCAGGGTTCTG +
Preference number: 6 (lower is better)
Translates to: SAEMIFSTKLSP*CPTAPVRSRVL
Trigger: CAGAACCCTGGATCTCACAGGAGCAGTTGGACATCATGGAGACAACTTAGTAGAGAAGATCATTTCAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1
CDS TCA 72 bp TTTCAGGAGACTCCGAGCTCCAGCAATATCCCGAAGTaGAGTAAAGAGTTCATCCACGGCAATTTTGGATTT +
Preference number: 6 (lower is better)
Translates to: FQETPSSSNIPK*SKEFIHGNFGF
Trigger: AAATCCAAAATTGCCGTGGATGAACTCTTTACTTCACTTCGGGATATTGCTGGAGCTCGGAGTCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388940.8
ENST00000401642.8
CDS TCA 72 bp ATGTGTTCAATATCAACGGAATCTGGCCTCTCGGGATaGAATATTTCCTCCACAACTTGCTTCAACAATGGC +
Preference number: 6 (lower is better)
Translates to: MCSISTESGLSG*NISSTTCFNNG
Trigger: GCCATTGTTGAAGCAAGTTGTGGAGGAAATATTTCATCCCGAGAGGCCAGATTCCGTTGATATTGAACACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS TCA 72 bp CATGCTAAATCCAGTTTTAAGGAGATCAGTGAGGCCTaGAGACATGTGTTCAATATCAACGGAATCTGGCCT +
Preference number: 6 (lower is better)
Translates to: HAKSSFKEISEA*RHVFNINGIWP
Trigger: AGGCCAGATTCCGTTGATATTGAACACATGTCTTCAGGCCTCACTGATCTCCTTAAAACTGGATTTAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS CCA 72 bp GGGATGAAATATTTCCTCCACAACTTGCTTCAACAATaGCTTATAAGATGCCTGGTGGGTATGATTTCCAGG +
Preference number: 6 (lower is better)
Translates to: GMKYFLHNLLQQ*LIRCLVGMISR
Trigger: CCTGGAAATCATACCCACCAGGCATCTTATAAGCCATTGTTGAAGCAAGTTGTGGAGGAAATATTTCATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401642.8
CDS GCA 72 bp TGCAACCACATTATAATTTTCCTCCTCAGTATGGAGTaGAGTGAGCGCTATCATGTTAACCATCACATCATT +
Preference number: 6 (lower is better)
Translates to: CNHIIIFLLSME*SERYHVNHHII
Trigger: AATGATGTGATGGTTAACATGATAGCGCTCACTGCACTCCATACTGAGGAGGAAAATTATAATGTGGTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388940.8
ENST00000401642.8
ENST00000503450.1
ENST00000611795.1